1,763 results on '"Till, F."'
Search Results
2. Outer membrane protein assembly mediated by BAM-SurA complexes
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Fenn, Katherine L., Horne, Jim E., Crossley, Joel A., Böhringer, Nils, Horne, Romany J., Schäberle, Till F., Calabrese, Antonio N., Radford, Sheena E., and Ranson, Neil A.
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- 2024
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3. Distinct genetic liability profiles define clinically relevant patient strata across common diseases
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Trastulla, Lucia, Dolgalev, Georgii, Moser, Sylvain, Jiménez-Barrón, Laura T., Andlauer, Till F. M., von Scheidt, Moritz, Budde, Monika, Heilbronner, Urs, Papiol, Sergi, Teumer, Alexander, Homuth, Georg, Völzke, Henry, Dörr, Marcus, Falkai, Peter, Schulze, Thomas G., Gagneur, Julien, Iorio, Francesco, Müller-Myhsok, Bertram, Schunkert, Heribert, and Ziller, Michael J.
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- 2024
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4. Factor analysis of lifetime psychopathology and its brain morphometric and genetic correlates in a transdiagnostic sample
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Krug, Axel, Stein, Frederike, David, Friederike S., Schmitt, Simon, Brosch, Katharina, Pfarr, Julia-Katharina, Ringwald, Kai G., Meller, Tina, Thomas-Odenthal, Florian, Meinert, Susanne, Thiel, Katharina, Winter, Alexandra, Waltemate, Lena, Lemke, Hannah, Grotegerd, Dominik, Opel, Nils, Repple, Jonathan, Hahn, Tim, Streit, Fabian, Witt, Stephanie H., Rietschel, Marcella, Andlauer, Till F. M., Nöthen, Markus M., Philipsen, Alexandra, Nenadić, Igor, Dannlowski, Udo, Kircher, Tilo, and Forstner, Andreas J.
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- 2024
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5. Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease
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Getzke, Felix, Wang, Lei, Chesneau, Guillaume, Böhringer, Nils, Mesny, Fantin, Denissen, Nienke, Wesseler, Hidde, Adisa, Priscilla Tijesuni, Marner, Michael, Schulze-Lefert, Paul, Schäberle, Till F., and Hacquard, Stéphane
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- 2024
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6. Associations between antagonistic SNPs for neuropsychiatric disorders and human brain structure
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Lydia M. Federmann, Friederike S. David, Christiane Jockwitz, Thomas W. Mühleisen, Dominique I. Pelzer, Markus M. Nöthen, Svenja Caspers, Katrin Amunts, Janik Goltermann, Till F. M. Andlauer, Frederike Stein, Katharina Brosch, Tilo Kircher, Sven Cichon, Udo Dannlowski, Lisa Sindermann, and Andreas J. Forstner
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Abstract A previously published genome-wide association study (GWAS) meta-analysis across eight neuropsychiatric disorders identified antagonistic single-nucleotide polymorphisms (SNPs) at eleven genomic loci where the same allele was protective against one neuropsychiatric disorder and increased the risk for another. Until now, these antagonistic SNPs have not been further investigated regarding their link to brain structural phenotypes. Here, we explored their associations with cortical surface area and cortical thickness (in 34 brain regions and one global measure each) as well as the volumes of eight subcortical structures using summary statistics of large-scale GWAS of brain structural phenotypes. We assessed if significantly associated brain structural phenotypes were previously reported to be associated with major neuropsychiatric disorders in large-scale case-control imaging studies by the ENIGMA consortium. We further characterized the effects of the antagonistic SNPs on gene expression in brain tissue and their association with additional cognitive and behavioral phenotypes, and performed an exploratory voxel-based whole-brain analysis in the FOR2107 study (n = 754 patients with major depressive disorder and n = 847 controls). We found that eight antagonistic SNPs were significantly associated with brain structural phenotypes in regions such as anterior parts of the cingulate cortex, the insula, and the superior temporal gyrus. Case-control differences in implicated brain structural phenotypes have previously been reported for bipolar disorder, major depressive disorder, and schizophrenia. In addition, antagonistic SNPs were associated with gene expression changes in brain tissue and linked to several cognitive-behavioral traits. In our exploratory whole-brain analysis, we observed significant associations of gray matter volume in the left superior temporal pole and left superior parietal region with the variants rs301805 and rs1933802, respectively. Our results suggest that multiple antagonistic SNPs for neuropsychiatric disorders are linked to brain structural phenotypes. However, to further elucidate these findings, future case-control genomic imaging studies are required.
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- 2024
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7. Outer membrane protein assembly mediated by BAM-SurA complexes
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Katherine L. Fenn, Jim E. Horne, Joel A. Crossley, Nils Böhringer, Romany J. Horne, Till F. Schäberle, Antonio N. Calabrese, Sheena E. Radford, and Neil A. Ranson
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Science - Abstract
Abstract The outer membrane is a formidable barrier that protects Gram-negative bacteria against environmental threats. Its integrity requires the correct folding and insertion of outer membrane proteins (OMPs) by the membrane-embedded β-barrel assembly machinery (BAM). Unfolded OMPs are delivered to BAM by the periplasmic chaperone SurA, but how SurA and BAM work together to ensure successful OMP delivery and folding remains unclear. Here, guided by AlphaFold2 models, we use disulphide bond engineering in an attempt to trap SurA in the act of OMP delivery to BAM, and solve cryoEM structures of a series of complexes. The results suggest that SurA binds BAM at its soluble POTRA-1 domain, which may trigger conformational changes in both BAM and SurA that enable transfer of the unfolded OMP to the BAM lateral gate for insertion into the outer membrane. Mutations that disrupt the interaction between BAM and SurA result in outer membrane assembly defects, supporting the key role of SurA in outer membrane biogenesis.
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- 2024
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8. Postoperative dizziness after cochlear implant surgery: can it be caused by air?
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Manuel Christoph Ketterer, Friederike Everad, Niklas Lützen, Ann-Kathrin Rauch, Antje Aschendorff, Susan Arndt, and Till F. Jakob
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cochlear implant ,Vertigo ,Pneumolabyrinth ,dizziness ,surgery ,hearing loss ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
ObjectivesMultiple studies have described the onset and variable incidence of postoperative acute vertigo following cochlear implant (CI) surgery. However, postoperative imaging has not yet been specifically evaluated with special focus on vertigo. The aim of this study is to assess the incidence and causes of new-onset, acute postoperative vertigo following CI surgery using cone beam computed tomography (CBCT).Materials and methodsThis is a retrospective study involving ten patients who experienced postoperative dizziness and ten matched controls without dizziness. All patients received a cochlear implant (CI) between 2020 and 2024. The matching analysis was performed based on the implant, electrode array, and access to the cochlear. We analyzed the postoperative CBCT scans for changes suspicious of air trapping, a so-called pneumolabyrinth in the vestibule using minimal Hounsfield Units (HU).ResultsWe compared postoperative CBCT images for electrode array position monitoring in ten patients with vertigo versus ten patients without vertigo after CI surgery. Among the ten patients with postoperative dizziness, six showed suspicious changes in the vestibule consistent with the presence of air. These air-related changes were observed in the vestibule and, in one patient, additionally in the horizontal semicircular canal. Minimal HU were significantly different and confirmed the suspicion of intravestibular air.ConclusionThis is the first study to describe the suspicion of intravestibular air in CI patients with postoperative vertigo. Therefore, suctioning after the fenestration of the round window membrane or the endosteum after cochleostomy, as well as actions such as bending, pressing, and nose-blowing by the patient, should be strictly avoided. Furthermore, this finding highlights the importance of carefully sealing the electrode array at the cochleostomy site with connective tissue. Risk factors for the development of a pneumolabyrinth with air in the vestibule include intralabyrinthine or intracranial pressure changes, large cochleostomies or a second cochleostomy and electrode placement in the scala tympani.
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- 2024
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9. Does age protect against loss of tonotopy after acute deafness in adulthood?
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Nicole Rosskothen-Kuhl, Sarah Green, and Till F. Jakob
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aging ,adult hearing loss ,auditory brainstem ,tonotopy ,cochlear implant ,cochlear nucleus ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The mammalian auditory system develops a topographical representation of sound frequencies along its pathways, also called tonotopy. In contrast, sensory deprivation during early development results in no or only rudimentary tonotopic organization. This study addresses two questions: (1) How robust is the central tonotopy when hearing fails in adulthood? (2) What role does age play at time of deafness? To address these questions, we deafened young and old adult rats with previously normal hearing. One month after deafening, both groups were unilaterally supplied with cochlear implants and electrically stimulated for 2 h. The central auditory neurons, which were activated as a result of the local electrical intracochlear stimulation, were visualized using Fos staining. While the auditory system of young rats lost the tonotopic organization throughout the brainstem, the auditory system of the older rats mainly sustained its tonotopy. It can be proposed that plasticity prevails in the central auditory system of young adult rats, while network stability prevails in the brains of aging rats. Consequently, age may be an important factor in protecting a hearing-experienced adult auditory system from a rapid loss of tonotopy when suffering from acute hearing loss. Furthermore, the study provides compelling evidence that acute deafness in young adult patients should be diagnosed as early as possible to prevent maladaptation of the central auditory system and thus achieve the optimal hearing outcome with a hearing prosthesis.
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- 2024
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10. White and gray matter alterations in bipolar I and bipolar II disorder subtypes compared with healthy controls – exploring associations with disease course and polygenic risk
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Thiel, Katharina, Lemke, Hannah, Winter, Alexandra, Flinkenflügel, Kira, Waltemate, Lena, Bonnekoh, Linda, Grotegerd, Dominik, Dohm, Katharina, Hahn, Tim, Förster, Katharina, Kanske, Philipp, Repple, Jonathan, Opel, Nils, Redlich, Ronny, David, Friederike, Forstner, Andreas J., Stein, Frederike, Brosch, Katharina, Thomas-Odenthal, Florian, Usemann, Paula, Teutenberg, Lea, Straube, Benjamin, Alexander, Nina, Jamalabadi, Hamidreza, Jansen, Andreas, Witt, Stephanie H., Andlauer, Till F. M., Pfennig, Andrea, Bauer, Michael, Nenadić, Igor, Kircher, Tilo, Meinert, Susanne, and Dannlowski, Udo
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- 2024
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11. Distinct genetic liability profiles define clinically relevant patient strata across common diseases
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Lucia Trastulla, Georgii Dolgalev, Sylvain Moser, Laura T. Jiménez-Barrón, Till F. M. Andlauer, Moritz von Scheidt, Schizophrenia Working Group of the Psychiatric Genomics Consortium, Monika Budde, Urs Heilbronner, Sergi Papiol, Alexander Teumer, Georg Homuth, Henry Völzke, Marcus Dörr, Peter Falkai, Thomas G. Schulze, Julien Gagneur, Francesco Iorio, Bertram Müller-Myhsok, Heribert Schunkert, and Michael J. Ziller
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Science - Abstract
Abstract Stratified medicine holds great promise to tailor treatment to the needs of individual patients. While genetics holds great potential to aid patient stratification, it remains a major challenge to operationalize complex genetic risk factor profiles to deconstruct clinical heterogeneity. Contemporary approaches to this problem rely on polygenic risk scores (PRS), which provide only limited clinical utility and lack a clear biological foundation. To overcome these limitations, we develop the CASTom-iGEx approach to stratify individuals based on the aggregated impact of their genetic risk factor profiles on tissue specific gene expression levels. The paradigmatic application of this approach to coronary artery disease or schizophrenia patient cohorts identified diverse strata or biotypes. These biotypes are characterized by distinct endophenotype profiles as well as clinical parameters and are fundamentally distinct from PRS based groupings. In stark contrast to the latter, the CASTom-iGEx strategy discovers biologically meaningful and clinically actionable patient subgroups, where complex genetic liabilities are not randomly distributed across individuals but rather converge onto distinct disease relevant biological processes. These results support the notion of different patient biotypes characterized by partially distinct pathomechanisms. Thus, the universally applicable approach presented here has the potential to constitute an important component of future personalized medicine paradigms.
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- 2024
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12. Factor analysis of lifetime psychopathology and its brain morphometric and genetic correlates in a transdiagnostic sample
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Axel Krug, Frederike Stein, Friederike S. David, Simon Schmitt, Katharina Brosch, Julia-Katharina Pfarr, Kai G. Ringwald, Tina Meller, Florian Thomas-Odenthal, Susanne Meinert, Katharina Thiel, Alexandra Winter, Lena Waltemate, Hannah Lemke, Dominik Grotegerd, Nils Opel, Jonathan Repple, Tim Hahn, Fabian Streit, Stephanie H. Witt, Marcella Rietschel, Till F. M. Andlauer, Markus M. Nöthen, Alexandra Philipsen, Igor Nenadić, Udo Dannlowski, Tilo Kircher, and Andreas J. Forstner
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Abstract There is a lack of knowledge regarding the relationship between proneness to dimensional psychopathological syndromes and the underlying pathogenesis across major psychiatric disorders, i.e., Major Depressive Disorder (MDD), Bipolar Disorder (BD), Schizoaffective Disorder (SZA), and Schizophrenia (SZ). Lifetime psychopathology was assessed using the OPerational CRITeria (OPCRIT) system in 1,038 patients meeting DSM-IV-TR criteria for MDD, BD, SZ, or SZA. The cohort was split into two samples for exploratory and confirmatory factor analyses. All patients were scanned with 3-T MRI, and data was analyzed with the CAT-12 toolbox in SPM12. Psychopathological factor scores were correlated with gray matter volume (GMV) and cortical thickness (CT). Finally, factor scores were used for exploratory genetic analyses including genome-wide association studies (GWAS) and polygenic risk score (PRS) association analyses. Three factors (paranoid-hallucinatory syndrome, PHS; mania, MA; depression, DEP) were identified and cross-validated. PHS was negatively correlated with four GMV clusters comprising parts of the hippocampus, amygdala, angular, middle occipital, and middle frontal gyri. PHS was also negatively associated with the bilateral superior temporal, left parietal operculum, and right angular gyrus CT. No significant brain correlates were observed for the two other psychopathological factors. We identified genome-wide significant associations for MA and DEP. PRS for MDD and SZ showed a positive effect on PHS, while PRS for BD showed a positive effect on all three factors. This study investigated the relationship of lifetime psychopathological factors and brain morphometric and genetic markers. Results highlight the need for dimensional approaches, overcoming the limitations of the current psychiatric nosology.
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- 2024
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13. Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease
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Felix Getzke, Lei Wang, Guillaume Chesneau, Nils Böhringer, Fantin Mesny, Nienke Denissen, Hidde Wesseler, Priscilla Tijesuni Adisa, Michael Marner, Paul Schulze-Lefert, Till F. Schäberle, and Stéphane Hacquard
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Science - Abstract
Abstract Various microbes isolated from healthy plants are detrimental under laboratory conditions, indicating the existence of molecular mechanisms preventing disease in nature. Here, we demonstrated that application of sodium chloride (NaCl) in natural and gnotobiotic soil systems is sufficient to induce plant disease caused by an otherwise non-pathogenic root-derived Pseudomonas brassicacearum isolate (R401). Disease caused by combinatorial treatment of NaCl and R401 triggered extensive, root-specific transcriptional reprogramming that did not involve down-regulation of host innate immune genes, nor dampening of ROS-mediated immunity. Instead, we identified and structurally characterized the R401 lipopeptide brassicapeptin A as necessary and sufficient to promote disease on salt-treated plants. Brassicapeptin A production is salt-inducible, promotes root colonization and transitions R401 from being beneficial to being detrimental on salt-treated plants by disturbing host ion homeostasis, thereby bolstering susceptibility to osmolytes. We conclude that the interaction between a global change stressor and a single exometabolite from a member of the root microbiome promotes plant disease in complex soil systems.
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- 2024
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14. A synthetic lung model (ASYLUM) for validation of functional lung imaging methods shows significant differences between signal-based and deformation-field-based ventilation measurements
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Andreas Voskrebenzev, Marcel Gutberlet, Filip Klimeš, Till F. Kaireit, Hoen-oh Shin, Hans-Ulrich Kauczor, Tobias Welte, Frank Wacker, and Jens Vogel-Claussen
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lung proton MRI ,free-breathing ,registration ,phantom ,Jacobian ,Fourier decomposition ,Medicine (General) ,R5-920 - Abstract
IntroductionValidation of functional free-breathing MRI involves a comparison to more established or more direct measurements. This procedure is cost-intensive, as it requires access to patient cohorts, lengthy protocols, expenses for consumables, and binds working time. Therefore, the purpose of this study is to introduce a synthetic lung model (ASYLUM), which mimics dynamic MRI acquisition and includes predefined lung abnormalities for an alternative validation approach. The model is evaluated with different registration and quantification methods and compared with real data.MethodsA combination of trigonometric functions, deformation fields, and signal combinations were used to create 20 synthetic image time series. Lung voxels were assigned either to normal or one of six abnormality classes. The images were registered with three registration algorithms. The registered images were further analyzed with three quantification methods: deformation-based or signal-based regional ventilation (JVent/RVent) analysis and perfusion amplitude (QA). The registration results were compared with predefined deformations. Quantification methods were evaluated regarding predefined amplitudes and with respect to sensitivity, specificity, and spatial overlap of defects. In addition, 36 patients with chronic obstructive pulmonary disease were included for verification of model interpretations using CT as the gold standard.ResultsOne registration method showed considerably lower quality results (76% correlation vs. 92/97%, p ≤ 0.0001). Most ventilation defects were correctly detected with RVent and QA (e.g., one registration variant with sensitivity ≥78%, specificity ≥88). Contrary to this, JVent showed very low sensitivity for lower lung quadrants (0–16%) and also very low specificity (1–29%) for upper lung quadrants. Similar patterns of defect detection differences between RVent and JVent were also observable in patient data: Firstly, RVent was more aligned with CT than JVent for all quadrants (p ≤ 0.01) except for one registration variant in the lower left region. Secondly, stronger differences in overlap were observed for the upper quadrants, suggesting a defect bias in the JVent measurements in the upper lung regions.ConclusionThe feasibility of a validation framework for free-breathing functional lung imaging using synthetic time series was demonstrated. Evaluating different ventilation measurements, important differences were detected in synthetic and real data, with signal-based regional ventilation assessment being a more reliable method in the investigated setting.
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- 2024
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15. Association of polygenic score and the involvement of cholinergic and glutamatergic pathways with lithium treatment response in patients with bipolar disorder
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Amare, Azmeraw T., Thalamuthu, Anbupalam, Schubert, Klaus Oliver, Fullerton, Janice M., Ahmed, Muktar, Hartmann, Simon, Papiol, Sergi, Heilbronner, Urs, Degenhardt, Franziska, Tekola-Ayele, Fasil, Hou, Liping, Hsu, Yi-Hsiang, Shekhtman, Tatyana, Adli, Mazda, Akula, Nirmala, Akiyama, Kazufumi, Ardau, Raffaella, Arias, Bárbara, Aubry, Jean-Michel, Hasler, Roland, Richard-Lepouriel, Hélène, Perroud, Nader, Backlund, Lena, Bhattacharjee, Abesh Kumar, Bellivier, Frank, Benabarre, Antonio, Bengesser, Susanne, Biernacka, Joanna M., Birner, Armin, Marie-Claire, Cynthia, Cervantes, Pablo, Chen, Hsi-Chung, Chillotti, Caterina, Cichon, Sven, Cruceanu, Cristiana, Czerski, Piotr M., Dalkner, Nina, Del Zompo, Maria, DePaulo, J. Raymond, Étain, Bruno, Jamain, Stephane, Falkai, Peter, Forstner, Andreas J., Frisen, Louise, Frye, Mark A., Gard, Sébastien, Garnham, Julie S., Goes, Fernando S., Grigoroiu-Serbanescu, Maria, Fallgatter, Andreas J., Stegmaier, Sophia, Ethofer, Thomas, Biere, Silvia, Petrova, Kristiyana, Schuster, Ceylan, Adorjan, Kristina, Budde, Monika, Heilbronner, Maria, Kalman, Janos L., Kohshour, Mojtaba Oraki, Reich-Erkelenz, Daniela, Schaupp, Sabrina K., Schulte, Eva C., Senner, Fanny, Vogl, Thomas, Anghelescu, Ion-George, Arolt, Volker, Dannlowski, Udo, Dietrich, Detlef, Figge, Christian, Jäger, Markus, Lang, Fabian U., Juckel, Georg, Konrad, Carsten, Reimer, Jens, Schmauß, Max, Schmitt, Andrea, Spitzer, Carsten, von Hagen, Martin, Wiltfang, Jens, Zimmermann, Jörg, Andlauer, Till F. M., Fischer, Andre, Bermpohl, Felix, Ritter, Philipp, Matura, Silke, Gryaznova, Anna, Falkenberg, Irina, Yildiz, Cüneyt, Kircher, Tilo, Schmidt, Julia, Koch, Marius, Gade, Kathrin, Trost, Sarah, Haussleiter, Ida S., Lambert, Martin, Rohenkohl, Anja C., Kraft, Vivien, Grof, Paul, Hashimoto, Ryota, Hauser, Joanna, Herms, Stefan, Hoffmann, Per, Jiménez, Esther, Kahn, Jean-Pierre, Kassem, Layla, Kuo, Po-Hsiu, Kato, Tadafumi, Kelsoe, John, Kittel-Schneider, Sarah, Ferensztajn-Rochowiak, Ewa, König, Barbara, Kusumi, Ichiro, Laje, Gonzalo, Landén, Mikael, Lavebratt, Catharina, Leboyer, Marion, Leckband, Susan G., Tortorella, Alfonso, Manchia, Mirko, Martinsson, Lina, McCarthy, Michael J., McElroy, Susan, Colom, Francesc, Millischer, Vincent, Mitjans, Marina, Mondimore, Francis M., Monteleone, Palmiero, Nievergelt, Caroline M., Nöthen, Markus M., Novák, Tomas, O’Donovan, Claire, Ozaki, Norio, Pfennig, Andrea, Pisanu, Claudia, Potash, James B., Reif, Andreas, Reininghaus, Eva, Rouleau, Guy A., Rybakowski, Janusz K., Schalling, Martin, Schofield, Peter R., Schweizer, Barbara W., Severino, Giovanni, Shilling, Paul D., Shimoda, Katzutaka, Simhandl, Christian, Slaney, Claire M., Squassina, Alessio, Stamm, Thomas, Stopkova, Pavla, Maj, Mario, Turecki, Gustavo, Vieta, Eduard, Veeh, Julia, Witt, Stephanie H., Wright, Adam, Zandi, Peter P., Mitchell, Philip B., Bauer, Michael, Alda, Martin, Rietschel, Marcella, McMahon, Francis J., Schulze, Thomas G., Clark, Scott R., and Baune, Bernhard T.
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- 2023
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16. Regional conduction velocities determined by noninvasive mapping are associated with arrhythmia-free survival after atrial fibrillation ablation
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Invers-Rubio, Eric, Hernández-Romero, Ismael, Reventos-Presmanes, Jana, Ferro, Elisenda, Guichard, Jean-Baptiste, Regany-Closa, Mariona, Pellicer-Sendra, Berta, Borras, Roger, Prat-Gonzalez, Susanna, Tolosana, Jose Maria, Porta-Sanchez, Andreu, Arbelo, Elena, Guasch, Eduard, Sitges, Marta, Brugada, Josep, Guillem, Maria S., Roca-Luque, Ivo, Climent, Andreu M., Mont, Lluís, and Althoff, Till F.
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- 2024
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17. Determining the pharmacological potential and biological role of linear pseudoscorpion toxins via functional profiling
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Pelin Erkoc, Susanne Schiffmann, Thomas Ulshöfer, Marina Henke, Michael Marner, Jonas Krämer, Reinhard Predel, Till F. Schäberle, Sabine Hurka, Ludwig Dersch, Andreas Vilcinskas, Robert Fürst, and Tim Lüddecke
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pharmaceutical science ,Science - Abstract
Summary: Arthropod venoms contain bioactive molecules attractive for biomedical applications. However, few of these have been isolated, and only a tiny number has been characterized. Pseudoscorpions are small arachnids whose venom has been largely overlooked. Here, we present the first structural and functional assessment of the checacin toxin family, discovered in the venom of the house pseudoscorpion (Chelifer cancroides). We combined in silico and in vitro analyses to establish their bioactivity profile against microbes and various cell lines. This revealed inhibitory effects against bacteria and fungi. We observed cytotoxicity against specific cell types and effects involving second messengers. Our work provides insight into the biomedical potential and evolution of pseudoscorpion venoms. We propose that plesiotypic checacins evolved to defend the venom gland against infection, whereas apotypic descendants evolved additional functions. Our work highlights the importance of considering small and neglected species in biodiscovery programs.
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- 2024
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18. Management of Ventricular Arrhythmias in Heart Failure
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Vázquez-Calvo, Sara, Roca-Luque, Ivo, and Althoff, Till F.
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- 2023
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19. Determining the pharmacological potential and biological role of linear pseudoscorpion toxins via functional profiling
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Erkoc, Pelin, Schiffmann, Susanne, Ulshöfer, Thomas, Henke, Marina, Marner, Michael, Krämer, Jonas, Predel, Reinhard, Schäberle, Till F., Hurka, Sabine, Dersch, Ludwig, Vilcinskas, Andreas, Fürst, Robert, and Lüddecke, Tim
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- 2024
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20. Substrate Mapping for Ventricular Tachycardia Ablation Through High-Density Whole-Chamber Double Extra Stimuli: The S3 Protocol
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Guichard, Jean-Baptiste, Regany-Closa, Mariona, Vázquez-Calvo, Sara, Zazu, Blanca, Pellicer Sendra, Berta, Serrano-Campaner, Jaume, Molero-Pereira, Sílvia, Borràs, Roger, Ortiz, José Tomás, Falzone, Pasquale Valerio, Eulogio, Frida, Reventos-Presmanes, Jana, Garre, Paz, Arbelo, Elena, Althoff, Till F., Guasch, Eduard, Tolosana, Jose María, Brugada, Josep, Mont, Lluís, Porta-Sánchez, Andreu, and Roca-Luque, Ivo
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- 2024
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21. A Network Control Theory Approach to Longitudinal Symptom Dynamics in Major Depressive Disorder
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Hahn, Tim, Jamalabadi, Hamidreza, Emden, Daniel, Goltermann, Janik, Ernsting, Jan, Winter, Nils R., Fisch, Lukas, Leenings, Ramona, Sarink, Kelvin, Holstein, Vincent, Gruber, Marius, Grotegerd, Dominik, Meinert, Susanne, Dohm, Katharina, Leehr, Elisabeth J., Richter, Maike, Sindermann, Lisa, Enneking, Verena, Lemke, Hannah, Witt, Stephanie, Rietschel, Marcella, Brosch, Katharina, Pfarr, Julia-Katharina, Meller, Tina, Ringwald, Kai Gustav, Schmitt, Simon, Stein, Frederike, Nenadic, Igor, Kircher, Tilo, Müller-Myhsok, Bertram, Andlauer, Till F. M., Repple, Jonathan, Dannlowski, Udo, and Opel, Nils
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Electrical Engineering and Systems Science - Systems and Control ,Quantitative Biology - Neurons and Cognition - Abstract
Background: The evolution of symptoms over time is at the heart of understanding and treating mental disorders. However, a principled, quantitative framework explaining symptom dynamics remains elusive. Here, we propose a Network Control Theory of Psychopathology allowing us to formally derive a theoretical control energy which we hypothesize quantifies resistance to future symptom improvement in Major Depressive Disorder (MDD). We test this hypothesis and investigate the relation to genetic and environmental risk as well as resilience. Methods: We modelled longitudinal symptom-network dynamics derived from N=2,059 Beck Depression Inventory measurements acquired over a median of 134 days in a sample of N=109 patients suffering from MDD. We quantified the theoretical energy required for each patient and time-point to reach a symptom-free state given individual symptom-network topology (E 0 ) and 1) tested if E 0 predicts future symptom improvement and 2) whether this relationship is moderated by Polygenic Risk Scores (PRS) of mental disorders, childhood maltreatment experience, and self-reported resilience. Outcomes: We show that E 0 indeed predicts symptom reduction at the next measurement and reveal that this coupling between E 0 and future symptom change increases with higher genetic risk and childhood maltreatment while it decreases with resilience. Interpretation: Our study provides a mechanistic framework capable of predicting future symptom improvement based on individual symptom-network topology and clarifies the role of genetic and environmental risk as well as resilience. Our control-theoretic framework makes testable, quantitative predictions for individual therapeutic response and provides a starting-point for the theory-driven design of personalized interventions. Funding: German Research Foundation and Interdisciplinary Centre for Clinical Research, M\"unster, Comment: 21 pages, 2 figures
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- 2021
22. Genetic, Individual, and Familial Risk Correlates of Brain Network Controllability in Major Depressive Disorder
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Hahn, Tim, Winter, Nils R., Ernsting, Jan, Gruber, Marius, Mauritz, Marco J., Fisch, Lukas, Leenings, Ramona, Sarink, Kelvin, Blanke, Julian, Holstein, Vincent, Emden, Daniel, Beisemann, Marie, Opel, Nils, Grotegerd, Dominik, Meinert, Susanne, Heindel, Walter, Witt, Stephanie, Rietschel, Marcella, Nöthen, Markus M., Forstner, Andreas J., Kircher, Tilo, Nenadic, Igor, Jansen, Andreas, Müller-Myhsok, Bertram, Andlauer, Till F. M., Walter, Martin, Heuvel, Martijn P. van den, Jamalabadi, Hamidreza, Dannlowski, Udo, and Repple, Jonathan
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Quantitative Biology - Neurons and Cognition ,Electrical Engineering and Systems Science - Systems and Control - Abstract
Background: A therapeutic intervention in psychiatry can be viewed as an attempt to influence the brain's large-scale, dynamic network state transitions underlying cognition and behavior. Building on connectome-based graph analysis and control theory, Network Control Theory is emerging as a powerful tool to quantify network controllability - i.e., the influence of one brain region over others regarding dynamic network state transitions. If and how network controllability is related to mental health remains elusive. Methods: From Diffusion Tensor Imaging data, we inferred structural connectivity and inferred calculated network controllability parameters to investigate their association with genetic and familial risk in patients diagnosed with major depressive disorder (MDD, n=692) and healthy controls (n=820). Results: First, we establish that controllability measures differ between healthy controls and MDD patients while not varying with current symptom severity or remission status. Second, we show that controllability in MDD patients is associated with polygenic scores for MDD and psychiatric cross-disorder risk. Finally, we provide evidence that controllability varies with familial risk of MDD and bipolar disorder as well as with body mass index. Conclusions: We show that network controllability is related to genetic, individual, and familial risk in MDD patients. We discuss how these insights into individual variation of network controllability may inform mechanistic models of treatment response prediction and personalized intervention-design in mental health., Comment: 24 pages, 1 figure
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- 2021
23. Delineating Additional Risk Factors
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Ronald, Angelica, primary, Gordon, Joshua A., additional, Andlauer, Till F. M., additional, Atwoli, Lukoye, additional, Cai, Na, additional, Lehner, Thomas, additional, Nivard, Michel G., additional, and Roeder, Kathryn, additional
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- 2023
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24. Implementation and evaluation of personal genetic testing as part of genomics analysis courses in German universities
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Slosarek, Tamara, Ibing, Susanne, Schormair, Barbara, Heyne, Henrike O., Böttinger, Erwin P., Andlauer, Till F. M., and Schurmann, Claudia
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- 2023
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25. Genome-wide analyses of individual differences in quantitatively assessed reading- and language-related skills in up to 34,000 people
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Eising, Else, Mirza-Schreiber, Nazanin, de Zeeuw, Eveline L., Wang, Carol A., Truong, Dongnhu T., Allegrini, Andrea G., Shapland, Chin Yang, Zhu, Gu, Wigg, Karen G., Gerritse, Margot L., Molz, Barbara, Alagöz, Gökberk, Gialluisi, Alessandro, Abbondanza, Filippo, Rimfeld, Kaili, van Donkelaar, Marjolein, Jansen, Philip R., Andlauer, Till F. M., Bates, Timothy C., Bernard, Manon, Blokland, Kirsten, Bonte, Milene, Børglumz, Anders D., Bourgeron, Thomas, Brandeis, Daniel, Ceroni, Fabiola, Csépe, Valéria, Dale, Philip S., de Jong, Peter F., DeFries, John C., Démonet, Jean-François, Demontisz, Ditte, Feng, Yu, Gordon, Scott D., Guger, Sharon L., Hayiou-Thomas, Marianna E., Hernández-Cabrera, Juan A., Hottenga, Jouke-Jan, Hulme, Charles, Kere, Juha, Kerr, Elizabeth N., Koomar, Tanner, Landerl, Karin, Leonard, Gabriel T., Lovett, Maureen W., Lyytinen, Heikki, Martin, Nicholas G., Martinelli, Angela, Maurer, Urs, Michaelson, Jacob J., Moll, Kristina, Monaco, Anthony P., Morgan, Angela T., Nöthen, Markus M., Pausovaw, Zdenka, Pennell, Craig E., Pennington, Bruce F., Price, Kaitlyn M., Rajagopal, Veera M., Ramus, Franck, Richer, Louis, Simpson, Nuala H., Smith, Shelley D., Snowling, Margaret J., Stein, John, Strug, Lisa J., Talcott, Joel B., Tiemeier, Henning, van der Schroeff, Marc P., Verhoef, Ellen, Watkins, Kate E., Wilkinson, Margaret, Wright, Margaret J., Barr, Cathy L., Boomsma, Dorret I., Carreiras, Manuel, Franken, Marie-Christine J., Gruen, Jeffrey R., Luciano, Michelle, Müller-Myhsok, Bertram, Newbury, Dianne F., Olson, Richard K., Paracchini, Silvia, Paus, Tomáš, Plomin, Robert, Reillyg, Sheena, Schulte-Körne, Gerd, Tomblin, J. Bruce, van Bergen, Elsje, Whitehouse, Andrew J. O., Willcutt, Erik G., St Pourcain, Beate, Francks, Clyde, and Fisher, Simon E.
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- 2022
26. Genetic, individual, and familial risk correlates of brain network controllability in major depressive disorder
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Hahn, Tim, Winter, Nils R., Ernsting, Jan, Gruber, Marius, Mauritz, Marco J., Fisch, Lukas, Leenings, Ramona, Sarink, Kelvin, Blanke, Julian, Holstein, Vincent, Emden, Daniel, Beisemann, Marie, Opel, Nils, Grotegerd, Dominik, Meinert, Susanne, Heindel, Walter, Witt, Stephanie, Rietschel, Marcella, Nöthen, Markus M., Forstner, Andreas J., Kircher, Tilo, Nenadic, Igor, Jansen, Andreas, Müller-Myhsok, Bertram, Andlauer, Till F. M., Walter, Martin, van den Heuvel, Martijn P., Jamalabadi, Hamidreza, Dannlowski, Udo, and Repple, Jonathan
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- 2023
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27. Genome- and metabolome-guided discovery of marine BamA inhibitors revealed a dedicated darobactin halogenase
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Böhringer, Nils, Kramer, Jil-Christine, de la Mora, Eugenio, Padva, Leo, Wuisan, Zerlina G., Liu, Yang, Kurz, Michael, Marner, Michael, Nguyen, Hai, Amara, Patricia, Yokoyama, Kenichi, Nicolet, Yvain, Mettal, Ute, and Schäberle, Till F.
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- 2023
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28. Implementation and evaluation of personal genetic testing as part of genomics analysis courses in German universities
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Tamara Slosarek, Susanne Ibing, Barbara Schormair, Henrike O. Heyne, Erwin P. Böttinger, Till F. M. Andlauer, and Claudia Schurmann
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Genomics education ,Personal genotyping ,Personalized medicine ,Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Purpose Due to the increasing application of genome analysis and interpretation in medical disciplines, professionals require adequate education. Here, we present the implementation of personal genotyping as an educational tool in two genomics courses targeting Digital Health students at the Hasso Plattner Institute (HPI) and medical students at the Technical University of Munich (TUM). Methods We compared and evaluated the courses and the students’ perceptions on the course setup using questionnaires. Results During the course, students changed their attitudes towards genotyping (HPI: 79% [15 of 19], TUM: 47% [25 of 53]). Predominantly, students became more critical of personal genotyping (HPI: 73% [11 of 15], TUM: 72% [18 of 25]) and most students stated that genetic analyses should not be allowed without genetic counseling (HPI: 79% [15 of 19], TUM: 70% [37 of 53]). Students found the personal genotyping component useful (HPI: 89% [17 of 19], TUM: 92% [49 of 53]) and recommended its inclusion in future courses (HPI: 95% [18 of 19], TUM: 98% [52 of 53]). Conclusion Students perceived the personal genotyping component as valuable in the described genomics courses. The implementation described here can serve as an example for future courses in Europe.
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- 2023
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29. Investigating the phenotypic and genetic associations between personality traits and suicidal behavior across major mental health diagnoses
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Kalman, Janos L., Yoshida, Tomoya, Andlauer, Till F. M., Schulte, Eva C., Adorjan, Kristina, Alda, Martin, Ardau, Raffaela, Aubry, Jean-Michel, Brosch, Katharina, Budde, Monika, Chillotti, Caterina, Czerski, Piotr M., DePaulo, Raymond J., Forstner, Andreas, Goes, Fernando S., Grigoroiu-Serbanescu, Maria, Grof, Paul, Grotegerd, Dominik, Hahn, Tim, Heilbronner, Maria, Hasler, Roland, Heilbronner, Urs, Heilmann-Heimbach, Stefanie, Kapelski, Pawel, Kato, Tadafumi, Kohshour, Mojtaba Oraki, Meinert, Susanne, Meller, Tina, Nenadić, Igor, Nöthen, Markus M., Novak, Tomas, Opel, Nils, Pawlak, Joanna, Pfarr, Julia-Katharina, Potash, James B., Reich-Erkelenz, Daniela, Repple, Jonathan, Richard-Lepouriel, Hélène, Rietschel, Marcella, Ringwald, Kai G., Rouleau, Guy, Schaupp, Sabrina, Senner, Fanny, Severino, Giovanni, Squassina, Alessio, Stein, Frederike, Stopkova, Pavla, Streit, Fabian, Thiel, Katharina, Thomas-Odenthal, Florian, Turecki, Gustavo, Twarowska-Hauser, Joanna, Winter, Alexandra, Zandi, Peter P., Kelsoe, John R., Falkai, Peter, Dannlowski, Udo, Kircher, Tilo, Schulze, Thomas G., and Papiol, Sergi
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- 2022
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30. Uncovering the genetic architecture of broad antisocial behavior through a genome-wide association study meta-analysis
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Tielbeek, Jorim J., Uffelmann, Emil, Williams, Benjamin S., Colodro-Conde, Lucía, Gagnon, Éloi, Mallard, Travis T., Levitt, Brandt E., Jansen, Philip R., Johansson, Ada, Sallis, Hannah M., Pistis, Giorgio, Saunders, Gretchen R. B., Allegrini, Andrea G., Rimfeld, Kaili, Konte, Bettina, Klein, Marieke, Hartmann, Annette M., Salvatore, Jessica E., Nolte, Ilja M., Demontis, Ditte, Malmberg, Anni L. K., Burt, S. Alexandra, Savage, Jeanne E., Sugden, Karen, Poulton, Richie, Harris, Kathleen Mullan, Vrieze, Scott, McGue, Matt, Iacono, William G., Mota, Nina Roth, Mill, Jonathan, Viana, Joana F., Mitchell, Brittany L., Morosoli, Jose J., Andlauer, Till F. M., Ouellet-Morin, Isabelle, Tremblay, Richard E., Côté, Sylvana M., Gouin, Jean-Philippe, Brendgen, Mara R., Dionne, Ginette, Vitaro, Frank, Lupton, Michelle K., Martin, Nicholas G., Castelao, Enrique, Räikkönen, Katri, Eriksson, Johan G., Lahti, Jari, Hartman, Catharina A., Oldehinkel, Albertine J., Snieder, Harold, Liu, Hexuan, Preisig, Martin, Whipp, Alyce, Vuoksimaa, Eero, Lu, Yi, Jern, Patrick, Rujescu, Dan, Giegling, Ina, Palviainen, Teemu, Kaprio, Jaakko, Harden, Kathryn Paige, Munafò, Marcus R., Morneau-Vaillancourt, Geneviève, Plomin, Robert, Viding, Essi, Boutwell, Brian B., Aliev, Fazil, Dick, Danielle M., Popma, Arne, Faraone, Stephen V., Børglum, Anders D., Medland, Sarah E., Franke, Barbara, Boivin, Michel, Pingault, Jean-Baptiste, Glennon, Jeffrey C., Barnes, J. C., Fisher, Simon E., Moffitt, Terrie E., Caspi, Avshalom, Polderman, Tinca J. C., and Posthuma, Danielle
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- 2022
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31. Quantification of right atrial fibrosis by cardiac magnetic resonance: verification of the method to standardize thresholds
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Gunturiz-Beltrán, Clara, Borràs, Roger, Alarcón, Francisco, Garre, Paz, Figueras i Ventura, Rosa M., Benito, Eva M., Caixal, Gala, Althoff, Till F., Tolosana, José María, Arbelo, Elena, Roca-Luque, Ivo, Prat-González, Susanna, Perea, Rosario Jesús, Brugada, Josep, Sitges, Marta, Guasch, Eduard, and Mont, Lluís
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- 2023
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32. Cuantificación de la fibrosis auricular derecha mediante resonancia magnética cardiaca: verificación del método para la estandarización de umbrales
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Gunturiz-Beltrán, Clara, Borràs, Roger, Alarcón, Francisco, Garre, Paz, Figueras i Ventura, Rosa M., Benito, Eva M., Caixal, Gala, Althoff, Till F., Tolosana, José María, Arbelo, Elena, Roca-Luque, Ivo, Prat-González, Susanna, Perea, Rosario Jesús, Brugada, Josep, Sitges, Marta, Guasch, Eduard, and Mont, Lluís
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- 2023
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33. Functional in vitro and in vivo analysis of biosynthetic genes by heterologous expression in E. coli
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Jil-Christine Kramer, Nils Böhringer, Ute Mettal, and Till F. Schäberle
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Genetics ,Metabolomics ,Protein Expression and Purification ,Science (General) ,Q1-390 - Abstract
Summary: Biosynthetic gene clusters of natural products often harbor genes of unknown function, which are difficult to characterize. Here, we present a protocol for the functional analysis in vitro and in vivo of these biosynthetic genes by heterologous expression in E. coli. We describe steps for the expression of genes of interest in an established E. coli strain optimized to heterologously express natural products. We then detail the expression of a His-tagged gene to deduce the specific function of the protein.For complete details on the use and execution of this protocol, please refer to Böhringer et al.1 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
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- 2023
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34. Feldmethoden
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Bubenzer, Olaf, Casselmann, Carsten, Faßbinder, Jörg, Fischer, Peter, Forbriger, Markus, Hecht, Stefan, Lambers, Karsten, Linzen, Sven, Mächtle, Bertil, Schlütz, Frank, Siart, Christoph, Sonnemann, Till F., Stolz, Christian, Vött, Andreas, Werban, Ulrike, Werther, Lukas, Zielhofer, Christoph, Stolz, Christian, editor, and Miller, Christopher E., editor
- Published
- 2022
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- View/download PDF
35. Isolation, characterization, and bioactivity profiling of oxazoline containing madurastatin siderophores from Actinomadura sp.
- Author
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Bill, Mona-K., Kleiner, Yolanda, Flügel, Jana L., Kurz, Michael, Spohn, Marius, Marner, Michael, Mihajlovic, Sanja, Vilcinskas, Andreas, Schäberle, Till F., Hammann, Peter E., Patras, Maria A., and Schuler, Sören M. M.
- Published
- 2022
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36. Production of Antimicrobial Compounds by Homologous and Heterologous Expression
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Kresna, I. Dewa M., primary, Wuisan, Zerlina G., additional, and Schäberle, Till F., additional
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- 2022
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37. Archaeology of archaeology at Heloros: Re-interpreting the urban layout of a complex Greek settlement in Sicily using proximal sensing and data fusion.
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Nicola Lercari, Davide Tanasi, Till F. Sonnemann, Stephan Hassam, Dario Calderone, Paolino Trapani, Lena Ruider, and Rosa Lanteri
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- 2024
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38. Postoperative dizziness after cochlear implant surgery: can it be caused by air?
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Ketterer, Manuel Christoph, Everad, Friederike, Lützen, Niklas, Rauch, Ann-Kathrin, Aschendorff, Antje, Arndt, Susan, and Jakob, Till F.
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CONE beam computed tomography ,SEMICIRCULAR canals ,HEARING disorders ,VERTIGO ,INTRACRANIAL pressure ,COCHLEAR implants - Abstract
Objectives: Multiple studies have described the onset and variable incidence of postoperative acute vertigo following cochlear implant (CI) surgery. However, postoperative imaging has not yet been specifically evaluated with special focus on vertigo. The aim of this study is to assess the incidence and causes of new-onset, acute postoperative vertigo following CI surgery using cone beam computed tomography (CBCT). Materials and methods: This is a retrospective study involving ten patients who experienced postoperative dizziness and ten matched controls without dizziness. All patients received a cochlear implant (CI) between 2020 and 2024. The matching analysis was performed based on the implant, electrode array, and access to the cochlear. We analyzed the postoperative CBCT scans for changes suspicious of air trapping, a so-called pneumolabyrinth in the vestibule using minimal Hounsfield Units (HU). Results: We compared postoperative CBCT images for electrode array position monitoring in ten patients with vertigo versus ten patients without vertigo after CI surgery. Among the ten patients with postoperative dizziness, six showed suspicious changes in the vestibule consistent with the presence of air. These air-related changes were observed in the vestibule and, in one patient, additionally in the horizontal semicircular canal. Minimal HU were significantly different and confirmed the suspicion of intravestibular air. Conclusion: This is the first study to describe the suspicion of intravestibular air in CI patients with postoperative vertigo. Therefore, suctioning after the fenestration of the round window membrane or the endosteum after cochleostomy, as well as actions such as bending, pressing, and nose-blowing by the patient, should be strictly avoided. Furthermore, this finding highlights the importance of carefully sealing the electrode array at the cochleostomy site with connective tissue. Risk factors for the development of a pneumolabyrinth with air in the vestibule include intralabyrinthine or intracranial pressure changes, large cochleostomies or a second cochleostomy and electrode placement in the scala tympani. [ABSTRACT FROM AUTHOR]
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- 2025
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39. Radical-Mediated Nucleophilic Peptide Cross-Linking in Dynobactin Biosynthesis.
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Nguyen, Bach X., Gurusinga, Friscasari F., Mettal, Ute, Schäberle, Till F., and Yokoyama, Kenichi
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- 2024
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40. Does age protect against loss of tonotopy after acute deafness in adulthood?
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Rosskothen-Kuhl, Nicole, Green, Sarah, and Jakob, Till F.
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AUDITORY brain stem implants ,AUDITORY pathways ,COCHLEAR implants ,YOUNG adults ,INFERIOR colliculus - Abstract
The mammalian auditory system develops a topographical representation of sound frequencies along its pathways, also called tonotopy. In contrast, sensory deprivation during early development results in no or only rudimentary tonotopic organization. This study addresses two questions: (1) How robust is the central tonotopy when hearing fails in adulthood? (2) What role does age play at time of deafness? To address these questions, we deafened young and old adult rats with previously normal hearing. One month after deafening, both groups were unilaterally supplied with cochlear implants and electrically stimulated for 2 h. The central auditory neurons, which were activated as a result of the local electrical intracochlear stimulation, were visualized using Fos staining. While the auditory system of young rats lost the tonotopic organization throughout the brainstem, the auditory system of the older rats mainly sustained its tonotopy. It can be proposed that plasticity prevails in the central auditory system of young adult rats, while network stability prevails in the brains of aging rats. Consequently, age may be an important factor in protecting a hearing-experienced adult auditory system from a rapid loss of tonotopy when suffering from acute hearing loss. Furthermore, the study provides compelling evidence that acute deafness in young adult patients should be diagnosed as early as possible to prevent maladaptation of the central auditory system and thus achieve the optimal hearing outcome with a hearing prosthesis. [ABSTRACT FROM AUTHOR]
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- 2024
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41. 5'‐Methoxyarmillane, a Bioactive Sesquiterpenoid Aryl Ester from the Fungus Armillaria ostoyae.
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Orban, Axel M., Eichberg, Johanna, Marner, Michael, Breuer, Sandra, Patras, Maria A., Mettal, Ute, Schäberle, Till F., and Rühl, Martin
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- 2024
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42. Combination of high‐throughput microfluidics and FACS technologies to leverage the numbers game in natural product discovery
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Markus Oberpaul, Stephan Brinkmann, Michael Marner, Sanja Mihajlovic, Benedikt Leis, Maria A. Patras, Christoph Hartwig, Andreas Vilcinskas, Peter E. Hammann, Till F. Schäberle, Marius Spohn, and Jens Glaeser
- Subjects
Biotechnology ,TP248.13-248.65 - Abstract
Summary High‐throughput platforms facilitating screening campaigns of environmental samples are needed to discover new products of natural origin counteracting the spreading of antimicrobial resistances constantly threatening human and agricultural health. We applied a combination of droplet microfluidics and fluorescence‐activated cell sorting (FACS)‐based technologies to access and assess a microbial environmental sample. The cultivation performance of our microfluidics workflow was evaluated in respect to the utilized cultivation media by Illumina amplicon sequencing of a pool of millions of droplets, respectively. This enabled the rational selection of a growth medium supporting the isolation of microbial diversity from soil (five phyla affiliated to 57 genera) including a member of the acidobacterial subgroup 1 (genus Edaphobacter). In a second phase, the entire diversity covered by 1071 cultures was used for an arrayed bioprospecting campaign, resulting in > 6000 extracts tested against human pathogens and agricultural pests. After redundancy curation by using a combinatorial chemical and genomic fingerprinting approach, we assigned the causative agents present in the extracts. Utilizing UHPLC‐QTOF‐MS/MS‐guided fractionation and microplate‐based screening assays in combination with molecular networking the production of bioactive ionophorous macrotetrolides, phospholipids, the cyclic lipopetides massetolides E, F, H and serratamolide A and many derivatives thereof was shown.
- Published
- 2022
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43. Antimicrobial Activity of Ceftazidime-Avibactam, Ceftolozane-Tazobactam, Cefiderocol, and Novel Darobactin Analogs against Multidrug-Resistant Pseudomonas aeruginosa Isolates from Pediatric and Adolescent Cystic Fibrosis Patients
- Author
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Michael Marner, Laura Kolberg, Julia Horst, Nils Böhringer, Johannes Hübner, I Dewa M. Kresna, Yang Liu, Ute Mettal, Lei Wang, Melanie Meyer-Bühn, Sanja Mihajlovic, Matthias Kappler, Till F. Schäberle, and Ulrich von Both
- Subjects
Gram-negative antibiotics ,BamA ,AMR ,Pseudomonas ,antibiotics ,Pseudomonas aeruginosa ,Microbiology ,QR1-502 - Abstract
ABSTRACT The emergence and spread of antimicrobial resistance (AMR) in Gram-negative pathogens, such as carbapenem-resistant Pseudomonas aeruginosa, pose an increasing threat to health care. Patients with immunodeficiencies or chronic pulmonary disease, like cystic fibrosis (CF), are particularly vulnerable to Pseudomonas infections and depend heavily on antibiotic therapy. To broaden limited treatment options, this study evaluated the potency of the recently licensed drugs ceftazidime-avibactam (CZA), ceftolozane-tazobactam (C/T), and cefiderocol (FDC) as well as two novel preclinical antibiotics, darobactins B (DAR B) and B9 (DAR B9), against clinical P. aeruginosa isolates derived from respiratory samples of CF patients. We observed high levels of resistance to all three newly licensed drugs, with cefiderocol exhibiting the best activity. From the 66 investigated P. aeruginosa isolates, a total of 53% were resistant to CZA, 49% to C/T, and 30% to FDC. Strikingly, 52 of the evaluated isolates were obtained from CF patients prior to market introduction of the drugs. Thus, our results suggest that resistance to CZA, C/T, and FDC may be due to preexisting resistance mechanisms. On the other hand, our two novel preclinical compounds performed better than (CZA and C/T) or close to (FDC) the licensed drugs—most likely due to the novel mode of action. Thus, our results highlight the necessity of global consistency in the area of antibiotic stewardship to prevent AMR from further impairing the potency of antibiotics in clinical practice. Ultimately, this study demonstrates the urgency to support the development of novel antimicrobials, preferably with a new mode of action such as darobactins B and B9, two very promising antimicrobial compounds for the treatment of critically ill patients suffering from multidrug-resistant Gram-negative (MRGN) infections. IMPORTANCE Antimicrobial resistance (AMR) represents an ever increasing threat to the health care system. Even recently licensed drugs are often not efficient for the treatment of infections caused by Gram-negative bacteria, like Pseudomonas aeruginosa, a causative agent of lung infections. To address this unmet medical need, innovative antibiotics, which possess a new mode of action, need to be developed. Here, the antibiogram of clinical isolates derived from cystic fibrosis patients was generated and new bicyclic heptapeptides, which inhibit the outer membrane protein BamA, exhibited strong activity, also against multidrug-resistant isolates.
- Published
- 2023
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44. Sunlight exposure exerts immunomodulatory effects to reduce multiple sclerosis severity
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German Competence Network Multiple Sclerosis (KKNMS) and the BIONAT Network, Ostkamp, Patrick, Salmen, Anke, Pignolet, Béatrice, Görlich, Dennis, Andlauer, Till F. M., Schulte-Mecklenbeck, Andreas, Gonzalez-Escamilla, Gabriel, Bucciarelli, Florence, Gennero, Isabelle, Breuer, Johanna, Antony, Gisela, Schneider-Hohendorf, Tilman, Mykicki, Nadine, Bayas, Antonios, Bergh, Florian Then, Bittner, Stefan, Hartung, Hans-Peter, Friese, Manuel A., Linker, Ralf A., Luessi, Felix, Lehmann-Horn, Klaus, Mühlau, Mark, Paul, Friedemann, Stangel, Martin, Tackenberg, Björn, Tumani, Hayrettin, Warnke, Clemens, Weber, Frank, Wildemann, Brigitte, Zettl, Uwe K., Ziemann, Ulf, Müller-Myhsok, Bertram, Kümpfel, Tania, Klotz, Luisa, Meuth, Sven G., Zipp, Frauke, Hemmer, Bernhard, Hohlfeld, Reinhard, Brassat, David, Gold, Ralf, Gross, Catharina C., Lukas, Carsten, Groppa, Sergiu, Loser, Karin, Wiendl, Heinz, and Schwab, Nicholas
- Published
- 2021
45. Bone-anchored hearing system, contralateral routing of signals hearing aid or cochlear implant: what is best in single-sided deafness?
- Author
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Jakob, Till F., Speck, Iva, Rauch, Ann-Kathrin, Hassepass, Frederike, Ketterer, Manuel C., Beck, Rainer, Aschendorff, Antje, Wesarg, Thomas, and Arndt, Susan
- Published
- 2022
- Full Text
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46. Polygenic risk scores across the extended psychosis spectrum
- Author
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Lukasz Smigielski, Sergi Papiol, Anastasia Theodoridou, Karsten Heekeren, Miriam Gerstenberg, Diana Wotruba, Roman Buechler, Per Hoffmann, Stefan Herms, Kristina Adorjan, Heike Anderson-Schmidt, Monika Budde, Ashley L. Comes, Katrin Gade, Maria Heilbronner, Urs Heilbronner, Janos L. Kalman, Farahnaz Klöhn-Saghatolislam, Daniela Reich-Erkelenz, Sabrina K. Schaupp, Eva C. Schulte, Fanny Senner, Ion-George Anghelescu, Volker Arolt, Bernhard T. Baune, Udo Dannlowski, Detlef E. Dietrich, Andreas J. Fallgatter, Christian Figge, Markus Jäger, Georg Juckel, Carsten Konrad, Vanessa Nieratschker, Jens Reimer, Eva Reininghaus, Max Schmauß, Carsten Spitzer, Martin von Hagen, Jens Wiltfang, Jörg Zimmermann, Anna Gryaznova, Laura Flatau-Nagel, Markus Reitt, Milena Meyers, Barbara Emons, Ida Sybille Haußleiter, Fabian U. Lang, Thomas Becker, Moritz E. Wigand, Stephanie H. Witt, Franziska Degenhardt, Andreas J. Forstner, Marcella Rietschel, Markus M. Nöthen, Till F. M. Andlauer, Wulf Rössler, Susanne Walitza, Peter Falkai, Thomas G. Schulze, and Edna Grünblatt
- Subjects
Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Abstract As early detection of symptoms in the subclinical to clinical psychosis spectrum may improve health outcomes, knowing the probabilistic susceptibility of developing a disorder could guide mitigation measures and clinical intervention. In this context, polygenic risk scores (PRSs) quantifying the additive effects of multiple common genetic variants hold the potential to predict complex diseases and index severity gradients. PRSs for schizophrenia (SZ) and bipolar disorder (BD) were computed using Bayesian regression and continuous shrinkage priors based on the latest SZ and BD genome-wide association studies (Psychiatric Genomics Consortium, third release). Eight well-phenotyped groups (n = 1580; 56% males) were assessed: control (n = 305), lower (n = 117) and higher (n = 113) schizotypy (both groups of healthy individuals), at-risk for psychosis (n = 120), BD type-I (n = 359), BD type-II (n = 96), schizoaffective disorder (n = 86), and SZ groups (n = 384). PRS differences were investigated for binary traits and the quantitative Positive and Negative Syndrome Scale. Both BD-PRS and SZ-PRS significantly differentiated controls from at-risk and clinical groups (Nagelkerke’s pseudo-R 2: 1.3–7.7%), except for BD type-II for SZ-PRS. Out of 28 pairwise comparisons for SZ-PRS and BD-PRS, 9 and 12, respectively, reached the Bonferroni-corrected significance. BD-PRS differed between control and at-risk groups, but not between at-risk and BD type-I groups. There was no difference between controls and schizotypy. SZ-PRSs, but not BD-PRSs, were positively associated with transdiagnostic symptomology. Overall, PRSs support the continuum model across the psychosis spectrum at the genomic level with possible irregularities for schizotypy. The at-risk state demands heightened clinical attention and research addressing symptom course specifiers. Continued efforts are needed to refine the diagnostic and prognostic accuracy of PRSs in mental healthcare.
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- 2021
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47. Artificially-generated consolidations and balanced augmentation increase performance of U-net for lung parenchyma segmentation on MR images.
- Author
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Cristian Crisosto, Andreas Voskrebenzev, Marcel Gutberlet, Filip Klimeš, Till F Kaireit, Gesa Pöhler, Tawfik Moher, Lea Behrendt, Robin Müller, Maximilian Zubke, Frank Wacker, and Jens Vogel-Claussen
- Subjects
Medicine ,Science - Abstract
PurposeTo improve automated lung segmentation on 2D lung MR images using balanced augmentation and artificially-generated consolidations for training of a convolutional neural network (CNN).Materials and methodsFrom 233 healthy volunteers and 100 patients, 1891 coronal MR images were acquired. Of these, 1666 images without consolidations were used to build a binary semantic CNN for lung segmentation and 225 images (187 without consolidations, 38 with consolidations) were used for testing. To increase CNN performance of segmenting lung parenchyma with consolidations, balanced augmentation was performed and artificially-generated consolidations were added to all training images. The proposed CNN (CNNBal/Cons) was compared to two other CNNs: CNNUnbal/NoCons-without balanced augmentation and artificially-generated consolidations and CNNBal/NoCons-with balanced augmentation but without artificially-generated consolidations. Segmentation results were assessed using Sørensen-Dice coefficient (SDC) and Hausdorff distance coefficient.ResultsRegarding the 187 MR test images without consolidations, the mean SDC of CNNUnbal/NoCons (92.1 ± 6% (mean ± standard deviation)) was significantly lower compared to CNNBal/NoCons (94.0 ± 5.3%, P = 0.0013) and CNNBal/Cons (94.3 ± 4.1%, P = 0.0001). No significant difference was found between SDC of CNNBal/Cons and CNNBal/NoCons (P = 0.54). For the 38 MR test images with consolidations, SDC of CNNUnbal/NoCons (89.0 ± 7.1%) was not significantly different compared to CNNBal/NoCons (90.2 ± 9.4%, P = 0.53). SDC of CNNBal/Cons (94.3 ± 3.7%) was significantly higher compared to CNNBal/NoCons (P = 0.0146) and CNNUnbal/NoCons (P = 0.001).ConclusionsExpanding training datasets via balanced augmentation and artificially-generated consolidations improved the accuracy of CNNBal/Cons, especially in datasets with parenchymal consolidations. This is an important step towards a robust automated postprocessing of lung MRI datasets in clinical routine.
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- 2023
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48. Adolescent anxiety and pain problems: A joint, genome-wide investigation and pathway-based analysis.
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Sara Mascheretti, Diego Forni, Valentina Lampis, Luca Fumagalli, Stéphane Paquin, Till F M Andlauer, Wei Wang, Ginette Dionne, Mara R Brendgen, Frank Vitaro, Isabelle Ouellet-Morin, Guy Rouleau, Jean-Philippe Gouin, Sylvana Côté, Richard E Tremblay, Gustavo Turecki, Gabrielle Garon-Carrier, Michel Boivin, and Marco Battaglia
- Subjects
Medicine ,Science - Abstract
Both common pain and anxiety problems are widespread, debilitating and often begin in childhood-adolescence. Twin studies indicate that this co-occurrence is likely due to shared elements of risk, rather than reciprocal causation. A joint genome-wide investigation and pathway/network-based analysis of adolescent anxiety and pain problems can identify genetic pathways that subserve shared etiopathogenetic mechanisms. Pathway-based analyses were performed in the independent samples of: The Quebec Newborn Twin Study (QNTS; 246 twin pairs and 321 parents), the Longitudinal Study of Child Development in Quebec (QLSCD; n = 754), and in the combined QNTS and QLSCD sample. Multiple suggestive associations (p
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- 2023
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49. Extracts of Talaromyces purpureogenus Strains from Apis mellifera Bee Bread Inhibit the Growth of Paenibacillus spp. In Vitro
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Katerina Vocadlova, Tim Lüddecke, Maria A. Patras, Michael Marner, Christoph Hartwig, Karel Benes, Vladimir Matha, Petr Mraz, Till F. Schäberle, and Andreas Vilcinskas
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Apis mellifera ,honey bee ,fungi ,bee bread ,Talaromyces ,antimicrobial activity ,Biology (General) ,QH301-705.5 - Abstract
Honey bees coexist with fungi that colonize hive surfaces and pollen. Some of these fungi are opportunistic pathogens, but many are beneficial species that produce antimicrobial compounds for pollen conservation and the regulation of pathogen populations. In this study, we tested the in vitro antimicrobial activity of Talaromyces purpureogenus strains isolated from bee bread against Paenibacillus alvei (associated with European foulbrood disease) and three Aspergillus species that cause stonebrood disease. We found that methanol extracts of T. purpureogenus strains B18 and B195 inhibited the growth of P. alvei at a concentration of 0.39 mg/mL. Bioactivity-guided dereplication revealed that the activity of the crude extracts correlated with the presence of diketopiperazines, a siderophore, and three unknown compounds. We propose that non-pathogenic fungi such as Talaromyces spp. and their metabolites in bee bread could be an important requirement to prevent disease. Agricultural practices involving the use of fungicides can disrupt the fungal community and thus negatively affect the health of bee colonies.
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- 2023
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50. Novel concepts in atrial fibrillation ablation—breaking the trade‐off between efficacy and safety
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Till F. Althoff and Lluís Mont
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atrial fibrillation ,catheter ablation ,electroporation ,high power‐short duration ablation ,pulsed‐field ablation ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Despite substantial technological and procedural advances that have improved the efficacy and safety of AF ablation in recent years, the long‐term durability of ablation lesions is still not satisfactory. There also remains concern regarding rare but potentially life‐threatening procedure‐related complications like cardiac tamponade and atrioesophageal fistulae. Current ablation strategies are aiming to optimize the trade‐off between efficacy and safety, where more extensive ablation appears to inevitably increase the risk of collateral injury. However, new forms of energy application may have the potential to resolve this quandary. The emerging concept of high power‐short duration radiofrequency ablation features a more favorable lesion geometry that appears ideally suited to create contiguous lesions in the thin‐walled atrium. Moreover, novel non‐thermal ablation methods based on electroporation appear to provide a unique selectivity for cardiomyocytes and to spare surrounding tissues composed of other cell types. Both, high power‐short duration and electroporation ablation might have the potential to break the trade‐off between effective lesions and collateral damage and to substantially improve risk‐benefit ratios in AF ablation. In addition, both approaches lead to considerable reductions in ablation times. However, their putative benefits regarding efficacy, efficiency, and safety remain to be proven in randomized controlled trials.
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- 2021
- Full Text
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