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The Amazon biome is home to the largest tropical forest on the planet and has the greatest global biodiversity on Earth. Despite this, several less charismatic taxonomic groups, such as amphibians, lack comprehensive studies on their species richness and spatial distribution in the Amazon Region. In this study, we investigated: i) patterns of richness and endemism of Amazonian amphibians across geopolitical and biogeographic divisions, ii) similarities between different Amazonian bioregions, iii) temporal trends in amphibian sampling, iv) conservation status of amphibians according to assessments of the IUCN and v) the importance of diverse data sources in building a robust database of amphibian occurrences. We aggregated data from four different sources: publicly accessible platforms, peer-reviewed articles, grey literature and fieldwork inventories spanning 15 years (2007–2021), ultimately compiling 160,643 records of 947 species across 7,418 sampled sites. The greatest diversity of species was found in Peru, Brazil and Ecuador, with notable amphibian diversity and endemism in regions such as the western basins and the Tapajós River Basin in the central-southern Amazon. Geographical analysis of species diversity revealed four distinct groups defined by latitudinal (the Amazon River) and longitudinal (the Juruá, Madeira and Tapajós Rivers) gradients, with low species similarity (< 40%), particularly in the basins of north-western Amazonia. Amphibian sampling in the Amazon has intensified since the 1950s with the establishment of important research centres such as INPA and the GOELD Museum in the Brazilian Amazon. Approximately 18% of Amazonian amphibian species face extinction risk, according to IUCN assessments, highlighting the need for comprehensive data sources to understand and conserve species in this megadiverse region. Our findings suggest that river systems likely influence Amazonian amphibian species composition due to biogeographic history, emphasising the need for robust taxonomic and spatial databases. This study, therefore, contributes a valuable large-scale dataset for Amazonian amphibians, guiding future research and strategies for amphibian conservation.