1. In silico evo-devo: reconstructing stages in the evolution of animal segmentation
- Author
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Hogeweg, Paulien, ten Tusscher, Kirsten H. W. J., Davis, GK, Patel, NH, Peel, A, Akam, M, Couso, JP, Budd, GE, Seaver, EC, Minelli, A, Fusco, G, Tautz, D, Jacobs, DK, Hughes, NC, Fitz-Gibbon, ST, Winchell, CJ, Blair, SS, Wanninger, A, Kristof, A, Brinkmann, N, Chipman, AD, Richmond, DL, Oates, AC, Gold, DA, Runnegar, B, Gehling, JG, Rivera, A, Weisblat, D, Williams, T, Blachuta, B, Hegna, TA, Nagy, LM, Balavoine, G, Bénazéraf, B, Pourquié, O, Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, Quinn, LM, Nakamoto, A, Hester, SD, Constantinou, SJ, Blaine, WG, Tewksbury, AB, Matei, MT, Williams, TA, Graham, A, Butts, T, Lumsden, A, Kiecker, C, François, P, Hakim, V, Siggia, ED, Fujimoto, K, Ishihara, S, Kaneko, K, Tusscher, KH, Hogeweg, P, Crombach, A, Salazar-Ciudad, I, Newman, SA, Solé, RV, Pankratz, MJ, Jäckle, H, Crampin, EJ, Hackborn, WW, Maini, PK, Harper, JL, Rosen, BR, White, J, Tusscher, KHWJ, Petersen, CP, Reddien, PW, Martin, BL, Kimelman, D, Young, T, Rowland, JE, Ven, C, Bialecka, M, Novoa, A, Carapuco, M, Nes, J, Graaff, W, Duluc, I, Freund, J-N, Beck, F, Mallo, M, Deschamps, J, Meinhardt, H, Kappen, C, Schughart, K, Ruddle, FH, Sub Theoretical Biology, Dep Biologie, and Theoretical Biology and Bioinformatics
- Subjects
0301 basic medicine ,lcsh:Evolution ,Biology ,Bilaterian evolution ,03 medical and health sciences ,0302 clinical medicine ,Segmentation ,Plant Genetics & Genomics ,lcsh:QH359-425 ,Genetics ,Determinate growth ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,Evolutionary Biology ,In silico evolution ,Mechanism (biology) ,Posterior signalling ,Research ,Paleontology ,Indeterminate growth ,030104 developmental biology ,Order (biology) ,Evolutionary biology ,Evolutionary developmental biology ,Axis extension ,Developmental biology ,Zoology ,030217 neurology & neurosurgery ,Morphogen ,Developmental Biology - Abstract
Background The evolution of animal segmentation is a major research focus within the field of evolutionary–developmental biology. Most studied segmented animals generate their segments in a repetitive, anterior-to-posterior fashion coordinated with the extension of the body axis from a posterior growth zone. In the current study we ask which selection pressures and ordering of evolutionary events may have contributed to the evolution of this specific segmentation mode. Results To answer this question we extend a previous in silico simulation model of the evolution of segmentation by allowing the tissue growth pattern to freely evolve. We then determine the likelihood of evolving oscillatory sequential segmentation combined with posterior growth under various conditions, such as the presence or absence of a posterior morphogen gradient or selection for determinate growth. We find that posterior growth with sequential segmentation is the predominant outcome of our simulations only if a posterior morphogen gradient is assumed to have already evolved and selection for determinate growth occurs secondarily. Otherwise, an alternative segmentation mechanism dominates, in which divisions occur in large bursts through the entire tissue and all segments are created simultaneously. Conclusions Our study suggests that the ancestry of a posterior signalling centre has played an important role in the evolution of sequential segmentation. In addition, it suggests that determinate growth evolved secondarily, after the evolution of posterior growth. More generally, we demonstrate the potential of evo-devo simulation models that allow us to vary conditions as well as the onset of selection pressures to infer a likely order of evolutionary innovations. Electronic supplementary material The online version of this article (doi:10.1186/s13227-016-0052-8) contains supplementary material, which is available to authorized users.
- Published
- 2016