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Transformation of forests into agricultural lands threatens biodiversity and ecosystem functions globally. In the biodiversity hotspot Madagascar, key ecosystem functions along with highly endemic flora and fauna are under threat. Comprehensive studies identifying determinants of biodiversity and ecosystem function losses are lacking, with no studies accounting for endemic species richness across multiple taxa. We assess how plot-scale stand structural attributes (basal area, leaf area index, diameter diversity, and tree species richness) and landscape-scale forest cover influence biodiversity (species richness of butterflies, ants, birds, reptiles, amphibians, herbaceous plants, and multidiversity) and ecosystem functions (soil organic carbon, predation rate, acoustic diversity, and multifunctionality) in the tropical mosaic landscape of northeastern Madagascar. Complexly structured stands with a larger basal area and/or a higher tree species richness promoted greater endemic multidiversity (R² = 0.70), soil organic carbon, and acoustic diversity. However, our models did not indicate significant explanatory variables for multidiversity (R² = 0.25) and multifunctionality (R² = 0.43). Landscape-scale forest cover significantly favored endemic bird species richness. Our findings highlight that a simplified stand structure, resulting from land-use change, substantially reduces endemic biodiversity and ecosystem functions in this historically forested region. Conservation actions should aim at maintaining complex stand structure in forests and agroforests, while restoration interventions should focus on re-building such structures.

Bees are the most important group of insect pollinators, but their populations are declining. To gain a better understanding of wild bee responses to different stressors (e.g. land-use change) and conservation measures, regional and national monitoring schemes are currently being established in Germany, which is used here as a model region, and in many other countries. We offer perspectives on how to best design future bee monitoring programs with a focus on evaluating the implementation of conservation measures. We discuss different traditional and novel sampling methods, their efficacy depending on research questions and the life-history traits of target species, and how greater standardization of wild bee sampling and monitoring methods can make data more comparable, contributing to the identification of general trends and mechanisms driving bee populations. Furthermore, the potential impact of bee sampling itself on bee populations is discussed.

Abstract Diversity and functionality of bird communities in tropical agroforests are shaped by their surrounding landscape, particularly the extent and type of natural forest. However, most evidence comes from tropical rainforest landscapes, whereas the bearing of such trends in other forest types remains understudied. We compared functional and beta diversity of bird communities in 23 cacao agroforests embedded in landscapes of two contrasting Peruvian regions: seasonally‐dry tropical forests and subtropical rainforests from the Andean foothills. Strong climatic seasonality affects both landscapes, but forest vegetation structure and complexity differ. We found higher bird species richness (n = 179 spp) and higher species turnover in the subtropical forest than in the dry forest landscape (n = 64 spp). Only in the dry forest landscape, distance from forest increased dissimilarity driven by species loss, that is, the nestedness component of beta diversity. This points to the importance of conserving dry tropical forests within the broader landscape matrix, with known benefits for pest control and cacao yield. Functional diversity indices were not influenced by forest distance in either landscape, but the proportion of insects in birds' diet decreased by 27% along a 1 km distance gradient from forest in the subtropical forest landscape. In the dry forest landscape, however, it decreased by only 3% across the same distance gradient. Far from forest (≥1 km), forest specialization decreased by ~33% and 20% in the subtropical and dry forest landscapes, respectively. These differences indicate that regionally‐adapted agroforest management is paramount for conserving bird diversity and ecosystem services as pest control. Procuring high‐canopy shade trees and adequate microhabitats for insectivorous species is essential to maintain biocontrol services in the subtropical forest. Conversely, in the dry forest enhancing low‐canopy vegetation with a focus on frugivores and ensuring forest closeness to agroforests may maximize bird diversity and their ecosystem services. A complete version of this article is translated to Spanish in the supplements.

Agricultural intensification reduces the taxonomic diversity of bird communities, but its influence on functional diversity has been less studied. Here, we analyze the response of functional diversity of different cereal farmland bird communities across Europe to a gradient of agricultural intensification. We collected bibliographical information on life history traits (i.e. body mass, brain size, age of sexual maturity, clutch size, number of clutches, lifespan) of 30 species of birds recorded during field surveys in eight European countries. The index ''brood value'' was calculated to know each species’ level of reproductive investment per clutch. Intensification gradients at two spatial scales were obtained from field data through PCA, related to management practices at the field scale and the variation in structure and composition of farmland at the landscape scale respectively. We calculated the functional diversity index (FD) and the community-weighted mean (CWM) for each trait and sampling area, and linear mixed models in relation to the two intensification gradients were performed. Results showed that stronger intensification at the field level favors the assembly of shorter-lived communities and bird species with smaller relative brain sizes, also decreasing overall trait diversity. It also restricts the range of strategies for parental investment, reducing the functional diversity of the brood value index. More intensive field management would favor bird communities dominated by generalist and even introduced and/or managed hunting species, while putting at risk those farmland- and grassland-adapted species, typically more associated with the provision of ecosystem services. This highlights the relevance of field management (agrochemicals use, ploughing frequency) for the functional composition of bird communities and the conservation of farmland biodiversity. These findings add to existing knowledge on how species’ pace of life and cognitive capacity interact with drivers of global change, such as agricultural intensification.

Abstract Enhancing biodiversity in monoculture-dominated landscapes is a key sustainability challenge that requires considering the spatial organization of ecological communities (beta diversity). Here, we tested whether increasing landscape heterogeneity, through establishing 52 tree islands in an oil-palm landscape, is a suitable restoration strategy to enhance the diversity of six taxa (multi-taxa diversity). Further, we elucidated whether patterns in the spatial distribution of above- and below-ground taxa are related, and their role in shaping multi-taxa beta diversity. After five years, islands enhanced diversity at the landscape scale by fostering unique species (turnover). Partial correlation networks revealed that dissimilarity, in vegetation structural complexity and soil conditions, impacts multi-taxa beta diversity and turnover. In addition, soil fauna, bacteria, and fungi were more strongly associated with the overall community than aboveground taxa. Thus, strategies aiming to enhance multi-taxa diversity should consider the central role of landscape heterogeneity and soil biota.

Strengthening participation of Global South researchers in tropical ecology and conservation is a target of our scientific community, but strategies for fostering increased engagement are mostly directed at Global North institutions and researchers. Whereas such approaches are crucial, there are unique challenges to addressing diversity, equity and inclusion (DEI) within the Global South given its socio-economic, cultural and scientific contexts. Sustainable solutions protecting biodiversity in the tropics depend on the leadership of Global South communities, and therefore DEI improvements in the Global South are paramount in our field. Here, we propose ten key actions towards equitable international collaborations in tropical ecology, which, led by Global South researchers, may improve DEI at institutional, national and international levels. At an institutional level, we recommend (1) becoming role models for DEI, (2) co-developing research with local stakeholders, and (3) promoting transparent funding management favouring local scientists. At a national level, we encourage (4) engagement in political actions protecting scientists and their research in tropical countries, (5) participation in improving biodiversity research policies, and (6) devising research that reaches society. At an international level, we encourage Global South researchers in international collaborations to (7) lead and direct funding applications, (8) ensure equitable workloads, and (9) procure equal benefits among national and foreign collaborators. Finally, (10) we propose that Global South leadership in DEI efforts has the most potential for worldwide improvements, supporting positive long-lasting changes in our entire scientific community. Supplementary materials provide this abstract in 18 other languages spoken in the Global South.

The effectiveness of agri-environment schemes depends on scheme type, taxon and landscape. Here, we show how spatial scale, i.e. studied transect, field or farm level, and controlling for yield loss, can drastically change the evaluation of biodiversity benefits of on-field (organic farming) vs. off-field (flower strips) schemes. We selected ten agricultural landscapes in Central Germany, each with a triplet of winter wheat fields: one organic, one conventional with flower strip, and one conventional without flower strip as a control. We surveyed the abundance of wild bees at field edges for two years. We found that comparing data at the transect level may lead to misleading conclusions, because flower strips, covering only 5% of conventional fields, support fewer bees than large organic fields. However, a 50% cereal yield loss of organic farming can be considered as equivalent to yield levels of 50 ha conventional plus 50 ha flower strip. This would promote 3.5-times more bees than 100 ha organic farming. In conclusion, considering various scales in the evaluation of agri-environment scheme measures is necessary to reach a balanced understanding of their ecological and economic effects and their effectiveness.

Resolving ecological-economic trade-offs is a challenge in agriculture. Here, Wurz et al. find that in Malagasy vanilla agroforests, vanilla yield is generally not related to tree, herbaceous plant, bird, amphibian, reptile and ant biodiversity, creating opportunities for conservation outside protected areas.

Pesticide use on tropical crops has increased substantially in recent decades, posing a threat to biodiversity and ecosystem services. Amphibians and reptiles are common in tropical agricultural landscapes, but few field studies measure pesticide impacts on these taxa. Here we combine 1-year of correlative data with an experimental field approach from Indonesia. We show that while pesticide application cannot predict amphibian or reptile diversity patterns in cocoa plantations, our experimental exposure to herbicides and insecticides in vegetable gardens eliminated amphibians, whereas reptiles were less impacted by insecticide and not affected by herbicide exposure. The pesticide-driven loss of a common amphibian species known to be a pest-control agent (mainly invertebrate predation) suggests a strong indirect negative effect of pesticides on this service. We recommend landscape-based Integrated Pest Management and additional ecotoxicological studies on amphibians and reptiles to underpin a regulatory framework and to assure recognition and protection of their ecosystem services.

Abstract Background Intense conversion of tropical forests into agricultural systems contributes to habitat loss and the decline of ecosystem functions. Plant-pollinator interactions buffer the process of forest fragmentation, ensuring gene flow across isolated patches of forests by pollen transfer. In this study, we identified the composition of pollen grains stored in pot-pollen of stingless bees, Tetragonula laeviceps, via dual-locus DNA metabarcoding (ITS2 and rbcL) and light microscopy, and compared the taxonomic coverage of pollen sampled in distinct land-use systems categorized in four levels of management intensity (forest, shrub, rubber, and oil palm) for landscape characterization. Results Plant composition differed significantly between DNA metabarcoding and light microscopy. The overlap in the plant families identified via light microscopy and DNA metabarcoding techniques was low and ranged from 22.6 to 27.8%. Taxonomic assignments showed a dominance of pollen from bee-pollinated plants, including oil-bearing crops such as the introduced species Elaeis guineensis (Arecaceae) as one of the predominant taxa in the pollen samples across all four land-use types. Native plant families Moraceae, Euphorbiaceae, and Cannabaceae appeared in high proportion in the analyzed pollen material. One-way ANOVA (p > 0.05), PERMANOVA (R² values range from 0.14003 to 0.17684, for all tests p-value > 0.5), and NMDS (stress values ranging from 0.1515 to 0.1859) indicated a lack of differentiation between the species composition and diversity of pollen type in the four distinct land-use types, supporting the influx of pollen from adjacent areas. Conclusions Stingless bees collected pollen from a variety of agricultural crops, weeds, and wild plants. Plant composition detected at the family level from the pollen samples likely reflects the plant composition at the landscape level rather than the plot level. In our study, the plant diversity in pollen from colonies installed in land-use systems with distinct levels of forest transformation was highly homogeneous, reflecting a large influx of pollen transported by stingless bees through distinct land-use types. Dual-locus approach applied in metabarcoding studies and visual pollen identification showed great differences in the detection of the plant community, therefore a combination of both methods is recommended for performing biodiversity assessments via pollen identification.

Abstract In the tropics, combining food security with biodiversity conservation remains a major challenge. Tropical agroforestry systems are among the most biodiversity‐friendly and productive land‐use systems, and 70% of cocoa is grown by >6 million smallholder farmers living on

Background and aims – Agricultural intensification and loss of farmland heterogeneity have contributed to population declines of wild bees and other pollinators, which may have caused subsequent declines in insect-pollinated wild plants. Material and methods – Using data from 37 studies on 22 pollinator-dependent wild plant species across Europe, we investigated whether flower visitation and seed set of insect-pollinated plants decline with an increasing proportion of arable land within 1 km. Key results – Seed set increased with increasing flower visitation by bees, most of which were wild bees, but not with increasing flower visitation by other insects. Increasing proportion of arable land had a strongly variable effect on seed set and flower visitation by bees across studies. Conclusion – Factors such as landscape configuration, local habitat quality, and temporally changing resource availability (e.g. due to mass-flowering crops or honey bee hives) could have modified the effect of arable land on pollination. While our results highlight that the persistence of wild bees is crucial to maintain plant diversity, we also show that pollen limitation due to declining bee populations in homogenized agricultural landscapes is not a universal driver causing parallel losses of bees and insect-pollinated plants.

Although most of the wild bee species are ground-nesting, little is known about their nesting requirements and the conservation measures to promote ground-nesting bees. Calcareous grasslands are one of the most species-rich habitats in Central Europe and therefore essential for protecting bee diversity. The management practices of calcareous grasslands are so far often focused on plant populations, but in order to support declining insect populations, additional measures have to be considered for nature conservation. As wild bees depend on the availability of nesting sites, we studied the effects of locally increased bare ground availability on ground-nesting bees on four large and four small calcareous grasslands in Central Germany. Vegetation cover of 24 experimental plots (1 m²) was removed. The number of bee nests as well as the presence of bees on these plots (here: nesting activity) were compared to 24 control plots during six sampling runs. Results showed that the number of bee nests on experimental plots was fourteen times higher compared to control plots, positively related to the surrounding flower cover and higher on steeper slopes, independent of grassland area. Moreover, the observed nesting activity on experimental plots was 2.5 times higher compared to the control and positively related to the currently prevailing soil surface temperature. Bee abundance quantified during transect walks increased on grasslands with a generally higher bare ground availability and a higher flower cover. In conclusion, our study emphasizes the need to consider the availability of nesting resources to promote the vast majority of wild bees, which are ground-nesting. They benefited from bare ground availability as well as adjacent floral resources, and experimental removal of the vegetation cover appeared to be a major, so far underestimated conservation practice.

Abstract Pollination services of cacao are crucial for global chocolate production, yet remain critically understudied, particularly in regions of origin of the species. Notably, uncertainties remain concerning the identity of cacao pollinators, the influence of landscape (forest distance) and management (shade cover) on flower visitation and the role of pollen deposition in limiting fruit set. Here, we aimed to improve understanding of cacao pollination by studying limiting factors of fruit set in Peru, part of the centre of origin of cacao. Flower visitors were sampled with sticky insect glue in 20 cacao agroforests in two biogeographically distinct regions of Peru, across gradients of shade cover and forest distance. Further, we assessed pollen quantities and compared fruit set between naturally and manually pollinated flowers. The most abundant flower visitors were aphids, ants and thrips in the north and thrips, midges and parasitoid wasps in the south of Peru. We present some evidence of increasing visitation rates from medium to high shade (40%–95% canopy closure) in the dry north, and opposite patterns in the semi‐humid south, during the wet season. Natural pollination resulted in remarkably low fruit set rates (2%), and very low pollen deposition. After hand pollination, fruit set more than tripled (7%), but was still low. The diversity and high relative abundances of herbivore flower visitors limit our ability to draw conclusions on the functional role of different flower visitors. The remarkably low fruit set of naturally and even hand pollinated flowers indicates that other unaddressed factors limit cacao fruit production. Such factors could be, amongst others, a lack of effective pollinators, genetic incompatibility or resource limitation. Revealing efficient pollinator species and other causes of low fruit set rates is therefore key to establish location‐specific management strategies and develop high yielding native cacao agroforestry systems in regions of origin of cacao.

Identifying economic and ecological trade-offs of land-use transitions is important to ensure sustainability. Here, Grass et al. find biodiversity-profit trade-offs in tropical land-use transitions in Sumatra, and show that targeted landscape planning is needed to increase land-use efficiency while ensuring socio-ecological sustainability.

In Central Europe, agricultural intensification has led to increasing fragmentation and loss of semi-natural habitats. In turn, ecosystem services such as pollination are being lost when insect pollinators depend on semi-natural habitats. Calcareous grasslands are a highly threatened, biodiverse type of semi-natural habitat that may substantially support wild pollinators and pollination services to surrounding habitats. Here, we studied spillover of pollinators and pollination services from calcareous grassland fragments of different sizes into the surrounding landscape for solitary and social bees, as well as hoverflies. We selected eight grassland fragments of varying sizes (0.05–9.41 ha) surrounded by simplified agricultural landscapes near Göttingen, Germany. To quantify pollination spillover, we established Phacelia tanacetifolia (Boraginaceae) plots at distances ranging from 0 to 400 m from grassland edges alongside field roads. Our experiment revealed the importance of calcareous grassland fragments as sources of solitary bees, of which visitation to Phacelia plants decreased with increasing distance from fragments. Larger grassland fragments supported more than twice as many solitary bees as smaller ones. The limited foraging range of solitary bees appeared to be compensated by other groups, such as bumblebees and hoverflies, which were less affected by distance, suggesting a greater forage radius and/or independence from the grassland fragments as habitat. Seed production of Phacelia plants increased with overall pollinator visitation and solitary bee visits specifically, but did not decrease with distance. In conclusion, calcareous grasslands need to be conserved or restored as major bee habitats, which support spillover of pollination services into the adjacent agricultural landscape.

Global agrobiodiversity is threatened by the replacement of traditional, locally adapted crop varieties with high-yielding and hybrid varieties during the past 60 years, resulting in associated losses of crop, variety, and allele diversity. Locally adapted, traditional varieties are known to perform equal or even better under environmental stress conditions and to be more resilient in unstable cultivation environments. Therefore, European organic vegetable breeding organizations conserve local, traditional varieties and breed new varieties in low-input organic environments, aiming to increase the range of varieties for sustainable cultivation under sub-optimal growing conditions. However, performance of organic vegetable varieties, in comparison to conventional high-yielding and hybrid varieties, under different environmental conditions has not been intensively researched. To contribute to this scientific field, we compared the agronomic and quality performance between hybrid, conventional, and organic tomato and sweet pepper varieties, two economically important species on the EU market under a) well-watered and b) drought stress conditions, using five different varieties (i.e., 30 varieties) as replicates in each of the six groups. Performance of both species was negatively affected by drought, regardless of the breeding background. Equally, for tomato and sweet pepper, hybrids produced higher amounts of individual fruits, however total yield in kg was comparable for hybrid, conventional and organic plants. Considering the agro-ecological importance of enlarging and securing variety diversity in light of changing environmental conditions, we show that the assumed benefits of the hybrids can also be delivered by the organic and conventional varieties. These varieties should be considered as an important source of genetic resources, supporting farmers to adapt to their local climate and environmental conditions in the future.

Abstract Agroforestry is widely promoted as a potential solution to address multiple UN Sustainable Development Goals, including Zero Hunger, Responsible Consumption and Production, Climate Action, and Life on Land. Nonetheless, agroforests in the tropics often result from direct forest conversions, displacing rapidly vanishing and highly biodiverse forests with large carbon stocks, causing undesirable trade‐offs. Scientists thus debate whether the promotion of agroforestry in tropical landscapes is a sensible policy. So far, this debate typically fails to consider land‐use history, that is, whether an agroforest is derived from forest or from open land. Indeed, 57% of papers which we systematically reviewed did not describe the land‐use history of focal agroforestry systems. We further find that forest‐derived agroforestry supports higher biodiversity than open‐land‐derived agroforestry but essentially represents a degradation of forest, whereas open‐land‐derived agroforestry rehabilitates formerly forested open land. Based on a conceptual framework, we recommend to (a) promote agroforestry on suitable open land, (b) maintain tree cover in existing forest‐derived agroforests, and (c) conserve remaining forests. Land‐use history should be incorporated into land‐use policy to avoid incentivizing forest degradation and to harness the potential of agroforestry for ecosystem services and biodiversity.

Intensive mosquito control programs are likely to contribute to insect diversity loss, but these effects are both underestimated and understudied. We recommend to conduct direct biodiversity monitoring programs to understand the effects of both chemical and biological control.

Abstract Urbanization affects pollinator diversity and plant–pollinator networks by changing resource availability locally and in the surrounding landscape. We experimentally established (N = 12) standardized plant communities in farmland, villages, and cities to identify the relative role of local and landscape effects on plant–pollinator communities along this urbanization gradient. We found that the number of flower visits by solitary bees, but not bumblebees, was highest in cities and lowest in farmland, with villages being intermediate, whereas syrphid flies exhibited lowest numbers in cities. Villages supported the richest pollinator communities, as they appeared to benefit from both farmland and city communities. Plant–pollinator network metrics such as robustness, interaction evenness, and interaction diversity decreased with increasing urbanization, although local plant richness increased toward urban areas. In conclusion, pollinator communities were most diverse and stable in farmland and village sites, despite the high plant richness in cities. The different composition of pollinator communities along the urbanization gradient suggests considering all three landscape types for conservation schemes.

Abstract The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (https://www.nhm.ac.uk/our-science/our-work/biodiversity/predicts.html)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.

Oil palm plantations are intensively managed agricultural systems that increasingly dominate certain tropical regions. Oil palm monocultures have been criticized because of their reduced biodiversity compared to the forests they historically replaced, and because of their negative impact on soils, water, and climate. We experimentally test whether less intensive management schemes may enhance biodiversity and lessen detrimental effects on the environment while maintaining high yields. We compare reduced vs. conventional fertilization, as well as mechanical vs. chemical weed control (with herbicides) in a long-term, full-factorial, multidisciplinary experiment. We conducted the experiment in an oil palm company estate in Sumatra, Indonesia, and report the results of the first 2 years. We measured soil nutrients and functions, surveyed above- and below-ground organisms, tracked oil palm condition and productivity, and calculated plantation gross margins. Plants, aboveground arthropods, and belowground animals were positively affected by mechanical vs. chemical weed control, but we could not detect effects on birds and bats. There were no detectable negative effects of reduced fertilization or mechanical weeding on oil palm yields, fine roots, or leaf area index. Also, we could not detect detrimental effects of the reduced fertilization and mechanical weeding on soil nutrients and functions (mineral nitrogen, bulk density, and litter decomposition), but water infiltration and base saturation tended to be higher under mechanical weeding, while soil moisture, and microbial biomass varied with treatment. Economic performance, measured as gross margins, was higher under reduced fertilization. There might be a delayed response of oil palm to the different management schemes applied, so results of future years may confirm whether this is a sustainable management strategy. Nevertheless, the initial effects of the experiment are encouraging to consider less intensive management practices as economically and ecologically viable options for oil palm plantations.

Despite decades of study, conservation biocontrol via manipulation of landscape elements has not become a mainstream strategy for pest control. Meanwhile, conservation groups and governments rarely consider the impacts of land management on pest control, and growers can even fear that conservation biocontrol strategies may exacerbate pest problems. By finding leverage points among these actors, there may be opportunities to align them to promote more widespread adoption of conservation biological control at the landscape-scale. But are ecologists measuring the right things and presenting the right evidence to enable such alignment? We articulate key concerns of growers, conservation groups, and governments with regards to implementing conservation biological control at the landscape scale and argue that if ecologists want to gain more traction, we need to reconsider what we measure, for what goals, and for which audiences. A wider set of landscape objectives that ecologists should consider in our measurements include risk management for growers and co-benefits of multifunctional landscapes for public actors. Ecologists need to shift our paradigm toward longer-term, dynamic measurements, and build cross-disciplinary understanding with socioeconomic and behavioral sciences, to enable better integration of the objectives of these diverse actors that will be necessary for landscape management for conservation biocontrol to achieve its full potential.

The loss of roost sites is one of the major drivers of the worldwide decline in bat populations and roost site preferences, either natural or artificially provided, are not well known for African bat species specifically. In this study we focus on the preference for different artificial roost sites by insectivorous bats in macadamia orchards in northern South Africa. From June 2016 to July 2017 we monitored 31 bat houses, mounted on poles in six macadamia orchards, for presence of bats or other occupants. Twenty-one multi-chambered bat houses of three different designs were erected in sets of three. Additionally, five Rocket boxes, four bat houses in sets of two (painted black and white) and one colony bat house were erected. Bats were counted and visually identified to family or species level. From December 2016 to the end of March 2017 iButtons were installed to record and analyze temperature variation within one set of three bat houses. We related the occupancy of bat houses to the different types of houses and the environmental variables: distance to water, altitude and height of the bat houses above the ground. Overall bat house occupancy was significantly higher in the central bat house, in the set of three, and the black bat house, in the set of two. Mean temperatures differed between houses in the set of three with the central bat house having a significantly higher mean temperature than the houses flanking it. Our study might confirm previous assumptions that the microclimate of bat houses appears to be an important factor influencing occupancy. In conclusion, from the different bat houses tested in this study the designs we assume the warmest and best insulated attracted the most bats. Further research is needed on the preferred microclimate of different bat species, co-habitation within bat houses and the potential importance of altitude and distance to water. Our study provided little variation in both altitude and the distance to water.

Abstract Herbivory is one of the most important antagonistic insect–plant interactions and can be influenced by factors at local and landscape scales. Landscape fragmentation may reduce herbivory directly (i.e., decreasing abundance and species richness of herbivores), but also indirectly increase herbivory (i.e., releasing herbivores from top‐down control). At a local scale, reduced plant diversity may enhance herbivory through lessened associated resistance, while resource availability (i.e., higher vegetation height and cover) may promote herbivory. Few studies have simultaneously considered the influence of local and landscape variables on insect herbivory. We evaluate effects of landscape (fragment size, connectivity, and arable land percentage) and local factors (plant cover and height and plant species richness) on insect herbivory in fragmented calcareous grasslands. Further, we ask whether these effects depend on feeding traits of herbivores (chewers vs. suckers) and habitat specialization of plants (specialists vs. generalists). Results show that herbivory was best explained by models including variables at both local and landscape scales. However, local factors were more important than landscape variables. Herbivory was in all cases positively related to height of herbs (i.e., taller and more heterogeneous food resources), whereas the effect of plant species richness varied with feeding traits of herbivores. Herbivory by chewers, which are commonly more generalist feeders, was negatively affected by plant species richness, supporting the idea of associated plant resistance. In contrast, herbivory by suckers, which tend to be more specialized, increased with plant richness. Although there was little influence of landscape scale, herbivory on specialist plants was significantly higher in smaller grasslands probably as a consequence of herbivore release from natural enemies. Functional redundancy among herbivore species would allow to maintain overall herbivory in fragmented calcareous grasslands. This study highlights the need to consider different herbivore and plant traits for a better understanding of herbivory responses to local and landscape factors.

The diet of insectivorous bat species is difficult to study and the least invasive tool to gain information on these predators’ foraging preferences is the study of their faecal pellets. The aim of this study was to determine whether bats consumed insect pest species in macadamia orchards, with the additional goal of incentivising farmers to adopt a more integrated pest management approach (IPM). We used a molecular approach to provide insight into insectivorous bat diet, analysing pellets with fluorescent-labelled and species-specific primers (COI). Faecal pellets were collected from captured individuals or from trays installed underneath bathouses and roosts between July 2015 and April 2017 in the Levubu region, Limpopo, South Africa. Four of the main insect pests, two moth (Lepidoptera: Tortricidae) and two stinkbug (Hemiptera: Pentatomidae) species, were collected for species-specific primer development and assay optimisation. We extracted DNA from the faecal pellets and amplified the target regions of the four target pest species present. To verify the results of the fragment analyses we also sequenced all PCR products.All the species or families of bats from which pellets were collected foraged on at least one of the four major insect pests, with insect pest sequences obtained and confirmed from 57 out of 103 samples (55%). Bats consumed insect pests throughout the macadamia growing seasons and are much more generalist and presumably opportunistic feeders than previously assumed. Nearly all species and families of bats analysed foraged on both the Lepidopteran and Hemipteran insect pest species. In conclusion, bats appear to be important for pest control and we suggest that farmers should maintain or restore (semi-)natural vegetation inside and adjacent to their farms. Adding water sources and roosting opportunities, and minimizing pesticide treatments may furthermore promote bat activity. Keywords: Fragment analyses, IPM, Molecular diet analyses, Bat, Ecosystem service, Agriculture

Small-scale farmers in Southeast Asia are increasingly turning to monocultures of oil palm and rubber to maximize income. Clough and colleagues demonstrate that this land-use change in Indonesia comes at a cost to a wide array of ecosystem functions and biodiversity.

Biological control, a globally-important ecosystem service, can provide long-term and broad-scale suppression of invasive pests, weeds and pathogens in natural, urban and agricultural environments. Following (few) historic cases that led to sizeable environmental up-sets, the discipline of arthropod biological control has—over the past decades—evolved and matured. Now, by deliberately taking into account the ecological risks associated with the planned introduction of insect natural enemies, immense environmental and societal benefits can be gained. In this study, we document and analyze a successful case of biological control against the cassava mealybug, Phenacoccus manihoti (Hemiptera: Pseudococcidae) which invaded Southeast Asia in 2008, where it caused substantial crop losses and triggered two- to three-fold surges in agricultural commodity prices. In 2009, the host-specific parasitoid Anagyrus lopezi (Hymenoptera: Encyrtidae) was released in Thailand and subsequently introduced into neighboring Asian countries. Drawing upon continental-scale insect surveys, multi-year population studies and (field-level) experimental assays, we show how A. lopezi attained intermediate to high parasitism rates across diverse agro-ecological contexts. Driving mealybug populations below non-damaging levels over a broad geographical area, A. lopezi allowed yield recoveries up to 10.0 t/ha and provided biological control services worth several hundred dollars per ha (at local farm-gate prices) in Asia’s four-million ha cassava crop. Our work provides lessons to invasion science and crop protection worldwide. Furthermore, it accentuates the importance of scientifically-guided biological control for insect pest management, and highlights its potentially large socio-economic benefits to agricultural sustainability in the face of a debilitating invasive pest. In times of unrelenting insect invasions, surging pesticide use and accelerating biodiversity loss across the globe, this study demonstrates how biological control—as a pure public good endeavor—constitutes a powerful, cost-effective and environmentally-responsible solution for invasive species mitigation.

Indonesia is the largest producer of oil palm and the second largest exporter of rubber worldwide; a significant part of the country's rainforests have been converted to agriculture. Conservation measures are needed to assess and reduce the impact of agricultural intensification on the vertebrate fauna, but limited effort has been put so far in understanding the effects of habitat conversion on reptiles and amphibians. Here we study community composition, species richness and abundance of the herpetofauna of the densely farmed Jambi province, central Sumatra (Indonesia). We compared reptile and amphibian communities of upland and riparian sites of lowland rainforest as well as upland and riparian sites of oil palm and rubber plantations through visual-aural encounter surveys and pitfall trappings. Plantations tended to have lower amphibian abundance when compared to riparian forest, but not compared to upland forest. There is a trend for higher amphibian numbers and species in riparian sites of all habitat types. Rare amphibians were much more abundant in riparian forest and common amphibians were more prevalent in plantations, especially oil palm. Surprisingly, reptile richness and abundance was higher in oil palm plantations than all other habitats. Plantations comprise mostly common reptile and amphibian species of low conservation interest, and communities were markedly different between plantations and forests. Several species were recorded for the first time in the sampled region. We conclude that in our region, riparian sites appear to be important for maintaining amphibian populations, but forest is doubtlessly irreplaceable to conserve rare amphibians. Nevertheless, in our study oil palm monocultures harbored a relatively high reptile density and richness. Keywords: Herpetofauna, Species richness, Abundance, Community composition, Sumatra

Background: Tropical lowland rainforests are threatened by deforestation and degradation worldwide. Relatively little research has investigated the degradation of the forests of South-east Asia and its impact on biodiversity, and even less research has focused on the important peat swamp forests of Indonesia, which experienced major losses through severe fires in 2015. Methods: We acoustically sampled the avifauna of the Berbak National Park in 2013 in 12 plots split in three habitats: primary swamp forest, secondary swamp forest, and shrub swamp, respectively representing non-degraded, previously selectively logged, and burned habitats. We analysed the species richness, abundance, vocalisation activity, and community composition across acoustic counts, plots, feeding guilds and IUCN Red List categories. We also analysed community-weighted means of body mass, wing length, and distribution area. Results: The avifauna in the three habitats was remarkably similar in richness, abundance and vocalisation activity, and communities mainly differed due to a lower prevalence of understory insectivores (Old-World Babblers, Timaliidae) in shrub swamp. However primary forest retained twice as many conservation-worthy species as shrub swamp, which harboured heavier, probably more mobile species, with larger distributions than those of forest habitats. Conclusions: The National Park overall harboured higher bird abundances than nearby lowland rainforests. Protecting the remaining peat swamp forest in this little-known National Park should be a high conservation priority in the light of the current threats coming from wildlife trade, illegal logging, land use conversion, and man-made fires.

Abstract Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project – and avert – future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local‐scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups – including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems – https://www.nhm.ac.uk/our-science/our-work/biodiversity/predicts.html). We make site‐level summary data available alongside this article. The full database will be publicly available in 2015.

Abstract Plant size has been hypothesized to be a major driver of biotic interactions. However, it is little understood how plant size affects plant mutualists vs. antagonists and the plant's resulting reproductive success. We established a common garden experiment covering an interspecific plant size gradient (from 10 to 130 cm height) across 21 annual Brassicaceae species, thereby standardizing features of habitat and surrounding landscape. We assessed flower‐visiting pollinators and florivores (pollen beetle adults and larvae) and the resulting effects of all these flower‐visiting insects on plant reproductive success. Besides flower characteristics (size, abundance, color), plant size had a generally positive effect on abundance and species richness of pollinators as well as on abundance of pollen beetle adults and larvae. Pollen beetles reduced seed number as well as thousand‐seed weight, whereas pollinators increased seed number only. Overall, increasing plant size led to less thousand‐seed weight but had no effect on seed number, indicating counterbalancing effects of herbivory and pollination. In conclusion, seed number of large plant species should benefit from locations with many pollinators and few herbivores and small plant species' seed number from locations with few pollinators and many herbivores.

Abstract Human‐caused declines in biodiversity have stimulated intensive research on the consequences of biodiversity loss for ecosystem services and policy initiatives to preserve the functioning of ecosystems. Short‐term biodiversity experiments have documented positive effects of plant species richness on many ecosystem functions, and longer‐term studies indicate, for some ecosystem functions, that biodiversity effects can become stronger over time. Theoretically, a biodiversity effect can strengthen over time by an increasing performance of high‐diversity communities, by a decreasing performance of low‐diversity communities, or a combination of both processes. Which of these two mechanisms prevail, and whether the increase in the biodiversity effect over time is a general property of many functions remains currently unclear. These questions are an important knowledge gap as a continuing decline in the performance of low‐diversity communities would indicate an ecosystem‐service debt resulting from delayed effects of species loss on ecosystem functioning. Conversely, an increased performance of high‐diversity communities over time would indicate that the benefits of biodiversity are generally underestimated in short‐term studies. Analyzing 50 ecosystem variables over 11 years in the world's largest grassland biodiversity experiment, we show that overall plant diversity effects strengthened over time. Strengthening biodiversity effects were independent of the considered compartment (above‐ or belowground), organizational level (ecosystem variables associated with the abiotic habitat, primary producers, or higher trophic levels such as herbivores and pollinators), and variable type (measurements of pools or rates). We found evidence that biodiversity effects strengthened because of both a progressive decrease in functioning in species‐poor and a progressive increase in functioning in species‐rich communities. Our findings provide evidence that negative feedback effects at low biodiversity are as important for biodiversity effects as complementarity among species at high biodiversity. Finally, our results indicate that a current loss of species will result in a future impairment of ecosystem functioning, potentially decades beyond the moment of species extinction.

Land-use degradation and climate change are well-known drivers of biodiversity loss, but little information is available about their potential interaction. Here, we focus on the effects of land-use and precipitation on ant diversity in cacao agroforestry. In Central Sulawesi, Indonesia, we selected 16 cacao agroforestry plots with a shaded vs. unshaded plot in each of eight villages differing in precipitation (1032–2051 mm annual rainfall). On each plot, 10 cacao trees with similar size and age (7–10 years) were selected for hand collection of ants on each cacao tree and the soil surface. In total, we found 80 ant species belonging to five subfamilies. Land-use intensification (removal of shade trees) and precipitation had no effect on species richness of ants per cacao tree (alpha diversity) and, in an additive partitioning approach, within-plot beta diversity. However, higher precipitation (but not shade) significantly increased ant species dissimilarity across cacao trees within a plot, with ant species showing contrasting responses to precipitation. Reduced precipitation causing drought stress appeared to contribute to convergence of ant community structure, presumably via reduced heterogeneity in cacao tree growth. In conclusion, reduced precipitation greatly influenced ant community dissimilarity and appeared to be more important for ant community structure than land-use intensification.

Plant diversity affects species richness and abundance of taxa at higher trophic levels. However, plant diversity effects on omnivores (feeding on multiple trophic levels) and their trophic and non-trophic interactions are not yet studied because appropriate methods were lacking. A promising approach is the DNA-based analysis of gut contents using next generation sequencing (NGS) technologies. Here, we integrate NGS-based analysis into the framework of a biodiversity experiment where plant taxonomic and functional diversity were manipulated to directly assess environmental interactions involving the omnivorous ground beetle Pterostichus melanarius. Beetle regurgitates were used for NGS-based analysis with universal 18S rDNA primers for eukaryotes. We detected a wide range of taxa with the NGS approach in regurgitates, including organisms representing trophic, phoretic, parasitic, and neutral interactions with P. melanarius. Our findings suggest that the frequency of (i) trophic interactions increased with plant diversity and vegetation cover; (ii) intraguild predation increased with vegetation cover, and (iii) neutral interactions with organisms such as fungi and protists increased with vegetation cover. Experimentally manipulated plant diversity likely affects multitrophic interactions involving omnivorous consumers. Our study therefore shows that trophic and non-trophic interactions can be assessed via NGS to address fundamental questions in biodiversity research.

Rapid land-use change in the tropics causes dramatic losses in biodiversity and associated functions. In Sumatra, Indonesia, lowland rainforest has mainly been transformed by smallholders into oil palm (Elaeis guineensis) and rubber (Hevea brasiliensis) monocultures, interspersed with jungle rubber (rubber agroforests) and a few forest remnants. In two regions of the Jambi province, we conducted point counts in 32 plots of four different land-use types (lowland rainforest, jungle rubber, rubber plantation and oil palm plantation) as well as in 16 nearby homegardens, representing a small-scale, traditional agricultural system. We analysed total bird abundance and bird abundance in feeding guilds, as well as species richness per point count visit, per plot, and per land-use system, to unveil the conservation importance and functional responses of birds in the different land-use types. In total, we identified 71 species from 24 families. Across the different land-use types, abundance did not significantly differ, but both species richness per visit and per plot were reduced in plantations. Feeding guild abundances between land-use types were variable, but homegardens were dominated by omnivores and granivores, and frugivorous birds were absent from monoculture rubber and oil palm. Jungle rubber played an important role in harbouring forest bird species and frugivores. Homegardens turned out to be of minor importance for conserving birds due to their low sizes, although collectively, they are used by many bird species. Changes in functional composition with land-use conversion may affect important ecosystem functions such as biological pest control, pollination, and seed dispersal. In conclusion, maintaining forest cover, including degraded forest and jungle rubber, is of utmost importance to the conservation of functional and taxonomic bird diversity.

Large plants are often more conspicuous and more attractive for associated animals than small plants, e.g. due to their wider range of resources. Therefore, plant size can positively affect species richness of associated animals, as shown for single groups of herbivores, but studies usually consider intraspecific size differences of plants in unstandardised environments. As comprehensive tests of interspecific plant size differences under standardised conditions are missing so far, we investigated effects of plant size on species richness of all associated arthropods using a common garden experiment with 21 Brassicaceae species covering a broad interspecific plant size gradient from 10 to 130 cm height. We recorded plant associated ecto- and endophagous herbivores, their natural enemies and pollinators on and in each aboveground plant organ, i.e. flowers, fruits, leaves and stems. Plant size (measured as height from the ground), the number of different plant organ entities and their biomass were assessed. Increasing plant size led to increased species richness of associated herbivores, natural enemies and pollinating insects. This pattern was found for ectophagous and endophagous herbivores, their natural enemies, as well as for herbivores associated with leaves and fruits and their natural enemies, independently of the additional positive effects of resource availability (i.e. organ biomass or number of entities and, regarding natural enemies, herbivore species richness). We found a lower R2 for pollinators compared to herbivores and natural enemies, probably caused by the high importance of flower characteristics for pollinator species richness besides plant size. Overall, the increase in plant height from 10 to 130 cm led to a 2.7-fold increase in predicted total arthropod species richness. In conclusion, plant size is a comprehensive driver of species richness of the plant associated arthropods, including pollinators, herbivores and their natural enemies, whether they are endophagous or ectophagous or associated with leaves or fruits.

The aim of this study was to determine the relative effects of landscape-scale management intensity, local management intensity and edge effect on diversity patterns of insect-pollinated vs. non-insect pollinated forbs in meadows and wheat fields. Nine landscapes were selected differing in percent intensively used agricultural area (IAA), each with a pair of organic and conventional winter wheat fields and a pair of organic and conventional meadows. Within fields, forbs were surveyed at the edge and in the interior. Both diversity and cover of forbs were positively affected by organic management in meadows and wheat fields. This effect, however, differed significantly between pollination types for species richness in both agroecosystem types (i.e. wheat fields and meadows) and for cover in meadows. Thus, we show for the first time in a comprehensive analysis that insect-pollinated plants benefit more from organic management than non-insect pollinated plants regardless of agroecosystem type and landscape complexity. These benefits were more pronounced in meadows than wheat fields. Finally, the community composition of insect-pollinated and non-insect-pollinated forbs differed considerably between management types. In summary, our findings in both agroecosystem types indicate that organic management generally supports a higher species richness and cover of insect-pollinated plants, which is likely to be favourable for the density and diversity of bees and other pollinators.

Pollination contributes to an estimated one third of global food production, through both the improvement of the yield and the quality of crops. Volatile compounds emitted by crop flowers mediate plant-pollinator interactions, but differences between crop varieties are still little explored. We investigated whether the visitation of crop flowers is determined by variety-specific flower volatiles using strawberry varieties (Fragaria x ananassa Duchesne) and how this affects the pollination services of the wild bee Osmia bicornis L. Flower volatile compounds of three strawberry varieties were measured via headspace collection. Gas chromatography showed that the three strawberry varieties produced the same volatile compounds but with quantitative differences of the total amount of volatiles and between distinct compounds. Electroantennographic recordings showed that inexperienced females of Osmia bicornis had higher antennal responses to all volatile compounds than to controls of air and paraffin oil, however responses differed between compounds. The variety Sonata was found to emit a total higher level of volatiles and also higher levels of most of the compounds that evoked antennal responses compared with the other varieties Honeoye and Darselect. Sonata also received more flower visits from Osmia bicornis females under field conditions, compared with Honeoye. Our results suggest that differences in the emission of flower volatile compounds among strawberry varieties mediate their attractiveness to females of Osmia bicornis. Since quality and quantity of marketable fruits depend on optimal pollination, a better understanding of the role of flower volatiles in crop production is required and should be considered more closely in crop-variety breeding.

Nature Communications 6: Article number: 7414 (2015); Published: 16 June 2015; Updated: 18 February 2016. The authors inadvertently omitted Kimiora L. Ward, who managed and contributed data, from the author list. This has now been corrected in both the PDF and HTML versions of the Article.

Managing ecosystems for carbon storage may also benefit biodiversity conservation, but such a potential 'win-win' scenario has not yet been assessed for tropical agroforestry landscapes. We measured above- and below-ground carbon stocks as well as the species richness of four groups of plants and eight of animals on 14 representative plots in Sulawesi, Indonesia, ranging from natural rainforest to cacao agroforests that have replaced former natural forest. The conversion of natural forests with carbon stocks of 227-362 Mg C ha(-1) to agroforests with 82-211 Mg C ha(-1) showed no relationships to overall biodiversity but led to a significant loss of forest-related species richness. We conclude that the conservation of the forest-related biodiversity, and to a lesser degree of carbon stocks, mainly depends on the preservation of natural forest habitats. In the three most carbon-rich agroforestry systems, carbon stocks were about 60% of those of natural forest, suggesting that 1.6 ha of optimally managed agroforest can contribute to the conservation of carbon stocks as much as 1 ha of natural forest. However, agroforestry systems had comparatively low biodiversity, and we found no evidence for a tight link between carbon storage and biodiversity. Yet, potential win-win agroforestry management solutions include combining high shade-tree quality which favours biodiversity with cacao-yield adapted shade levels.

In heterogeneous natural habitats, diverse plant, pollinator, and parasitoid communities can better partition resources and grow, pollinate, and consume at the highest rate.

Biodiversity conservation through land-use systems on private land is becoming a pressing environmental policy issue. Agroforestry, such as shade-coffee production, contributes to biodiversity conservation. However, falling coffee prices force many coffee growers to convert their sites into economically more attractive land uses. We performed an economic evaluation of coffee pollination by bees in two distinct tropical regions: an area of low human impact with forests neighboring agroforestry in Indonesia and an area of high human impact with little remaining forest in Ecuador. We evaluated bee pollination for different forest-destruction scenarios, where coffee yields depend on forests to provide nesting sites for bees. We used two novel approaches. First, we examined how coffee net revenues depend on the pollination services of adjacent forests by considering berry weight in addition to fruit set, thereby providing a comprehensive evaluation. Second, we determined the net welfare effects of land-use changes, including the fact that former forestland is normally used for alternative crops. In both regions, crop revenues exceeded coffee pollination values, generating incentives to convert forests, even if owners would be compensated for pollination services. The promotion of certified "biodiversity-friendly" coffee is a feasible option to maintain shade-coffee systems. This is of special importance in high-impact areas where only small forest fragments remain. We conclude that a comprehensive economic analysis is necessary to adequately evaluate rainforest preservation for the enhancement of ecosystem services, such as pollination.