58 results on '"Teder T"'
Search Results
2. Lipoxygenase-allene oxide synthase pathway in octocoral thermal stress response
- Author
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Lõhelaid, H., Teder, T., and Samel, N.
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- 2015
- Full Text
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3. Biodegradation of naphthalene mediated by the plant growth promoting rhizobacteria
- Author
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Teder T, Salme Timmusk, and Behers L
- Subjects
chemistry.chemical_classification ,Sucrose ,biology ,Polycyclic aromatic hydrocarbon ,Biodegradation ,Rhizobacteria ,biology.organism_classification ,chemistry.chemical_compound ,chemistry ,Aliivibrio fischeri ,Food science ,Paenibacillus polymyxa ,Naphthalene ,Glucan - Abstract
We compared the ability of two bacterial strains, Paenibacillus polymyxa A26 and P. polymyxa A26Sfp, for biodegradation of naphthalene (NAP). The studies were performed under simulated laboratory conditions, in liquid medium and soil with different carbon sources, pH and salt contents. Changes in the luminescence inhibition of Aliivibrio fischeri, as an indicator of the baseline toxicity, were observed in degradation mixtures during 7 days of incubation. While both strains expressed the best growth and NAP degradation ability in the minimal salt medium containing sucrose and 5% NaCl at pH 8, the mutant strain remained effective even under extreme conditions.A26Sfp was found to be an efficient and potentially industrially important polycyclic aromatic hydrocarbon degradation strain. Its extracellular polysaccharide production is 30% and glucan production twice that of the wild type A 26. The surface tension reduction ability was ascertained as 25–30% increased emulsification ability.
- Published
- 2021
- Full Text
- View/download PDF
4. Temporal and spatial variation of larval parasitism in non-outbreaking populations of a folivorous moth
- Author
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Teder, T., Tanhuanpää, M., Ruohomäki, K., Kaitaniemi, P., and Henriksson, J.
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- 2000
- Full Text
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5. Distinguishing between anticipatory and responsive plasticity in a seasonally polyphenic butterfly
- Author
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Esperk, T, Stefanescu, C, Teder, T, Wiklund, C, Kaasik, A, Tammaru, T, University of Zurich, and Esperk, T
- Subjects
10127 Institute of Evolutionary Biology and Environmental Studies ,1105 Ecology, Evolution, Behavior and Systematics ,570 Life sciences ,biology ,590 Animals (Zoology) - Abstract
Seasonal generations of short-lived organisms often differ in their morphological, behavioural and life history traits, including body size. These differences may be either due to immediate effects of seasonally variable environment on organisms (responsive plasticity) or rely on presumably adaptive responses of organisms to cues signalizing forthcoming seasonal changes (anticipatory plasticity). When directly developing individuals of insects are larger than their overwintering conspecifics, the between-generation differences are typically ascribed to responsive plasticity in larval growth. We tested this hypothesis using the papilionid butterly Iphiclides podalirius as a model species. In laboratory experiments, we demonstrated that seasonal differences in food quality could not explain the observed size difference. Similarly, the size differences are not likely to be explained by the immediate effects of ambient temperature and photoperiod on larval growth. The qualitative pattern of natural size differences between the directly developing and diapausing butterflies could be reproduced in the laboratory as a response to photoperiod, indicating anticipatory character of the response. Directly developing and diapausing individuals followed an identical growth trajectory until the end of the last larval instar, with size differences appearing just a few days before pupation. Taken together, various lines of evidence suggest that between-generation size differences in I. podalirius are not caused by immediate effects of environmental factors on larval growth. Instead, these differences rather represent anticipatory plasticity and are thus likely to have an adaptive explanation. It remains currently unclear, whether the seasonal differences in adult size per se are adaptive, or if they constitute co-product of processes related to the diapause. Our study shows that it may be feasible to distinguish between different types of plasticity on the basis of empirical data even if fitness cannot be directly measured, and contributes to the emerging view about the predominantly adaptive nature of seasonal polyphenisms in insects
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- 2018
6. Dispersal of open-habitat butterflies in managed forest landscapes: are colonisers special?
- Author
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Viljur, M.-L., primary, Relve, A., additional, Gimbutas, M., additional, Kaasik, A., additional, and Teder, T., additional
- Published
- 2018
- Full Text
- View/download PDF
7. The database of the Predicts (Projecting responses of ecological diversity in changing terrestrial systems) project
- Author
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Hudson, LN, Newbold, T, Contu, S, Hill, SLL, Lysenko, I, De Palma, A, Phillips, HRP, Alhusseini, TI, Bedford, FE, Bennett, DJ, Booth, H, Burton, VJ, Chng, CWT, Choimes, A, Correia, DLP, Day, J, Echeverría-Londoño, S, Emerson, SR, Gao, D, Garon, M, Harrison, MLK, Ingram, DJ, Jung, M, Kemp, V, Kirkpatrick, L, Martin, CD, Pan, Y, Pask-Hale, GD, Pynegar, EL, Robinson, AN, Sanchez-Ortiz, K, Senior, RA, Simmons, BI, White, HJ, Zhang, H, Aben, J, Abrahamczyk, S, Adum, GB, Aguilar-Barquero, V, Aizen, MA, Albertos, B, Alcala, EL, del Mar Alguacil, M, Alignier, A, Ancrenaz, M, Andersen, AN, Arbeláez-Cortés, E, Armbrecht, I, Arroyo-Rodríguez, V, Aumann, T, Axmacher, JC, Azhar, B, Azpiroz, AB, Baeten, L, Bakayoko, A, Báldi, A, Banks, JE, Baral, SK, Barlow, J, Barratt, BIP, Barrico, L, Bartolommei, P, Barton, DM, Basset, Y, Batáry, P, Bates, AJ, Baur, B, Bayne, EM, Beja, P, Benedick, S, Berg, Å, Bernard, H, Berry, NJ, Bhatt, D, Bicknell, JE, Bihn, JH, Blake, RJ, Bobo, KS, Bóçon, R, Boekhout, T, Böhning-Gaese, K, Bonham, KJ, Borges, PAV, Borges, SH, Boutin, C, Bouyer, J, Bragagnolo, C, Brandt, JS, Brearley, FQ, Brito, I, Bros, V, Brunet, J, Buczkowski, G, Buddle, CM, Bugter, R, Buscardo, E, Buse, J, Cabra-García, J, Cáceres, NC, Cagle, NL, Calviño-Cancela, M, Cameron, SA, Cancello, EM, Caparrós, R, Cardoso, P, Carpenter, D, Carrijo, TF, Carvalho, AL, Cassano, CR, Castro, H, Castro-Luna, AA, Rolando, CB, Cerezo, A, Chapman, KA, Chauvat, M, Christensen, M, Clarke, FM, Cleary, DFR, Colombo, G, Connop, SP, Craig, MD, Cruz-López, L, Cunningham, SA, D'Aniello, B, D'Cruze, N, da Silva, PG, Dallimer, M, Danquah, E, Darvill, B, Dauber, J, Davis, ALV, Dawson, J, de Sassi, C, de Thoisy, B, Deheuvels, O, Dejean, A, Devineau, J-L, Diekötter, T, Dolia, JV, Domínguez, E, Dominguez-Haydar, Y, Dorn, S, Draper, I, Dreber, N, Dumont, B, Dures, SG, Dynesius, M, Edenius, L, Eggleton, P, Eigenbrod, F, Elek, Z, Entling, MH, Esler, KJ, de Lima, RF, Faruk, A, Farwig, N, Fayle, TM, Felicioli, A, Felton, AM, Fensham, RJ, Fernandez, IC, Ferreira, CC, Ficetola, GF, Fiera, C, Filgueiras, BKC, Fırıncıoğlu, HK, Flaspohler, D, Floren, A, Fonte, SJ, Fournier, A, Fowler, RE, Franzén, M, Fraser, LH, Fredriksson, GM, Freire, GB, Frizzo, TLM, Fukuda, D, Furlani, D, Gaigher, R, Ganzhorn, JU, García, KP, Garcia-R, JC, Garden, JG, Garilleti, R, Ge, B-M, Gendreau-Berthiaume, B, Gerard, PJ, Gheler-Costa, C, Gilbert, B, Giordani, P, Giordano, S, Golodets, C, Gomes, LGL, Gould, RK, Goulson, D, Gove, AD, Granjon, L, Grass, I, Gray, CL, Grogan, J, Gu, W, Guardiola, M, Gunawardene, NR, Gutierrez, AG, Gutiérrez-Lamus, DL, Haarmeyer, DH, Hanley, ME, Hanson, T, Hashim, NR, Hassan, SN, Hatfield, RG, Hawes, JE, Hayward, MW, Hébert, C, Helden, AJ, Henden, J-A, Henschel, P, Hernández, L, Herrera, JP, Herrmann, F, Herzog, F, Higuera-Diaz, D, Hilje, B, Höfer, H, Hoffmann, A, Horgan, FG, Hornung, E, Horváth, R, Hylander, K, Isaacs-Cubides, P, Ishida, H, Ishitani, M, Jacobs, CT, Jaramillo, VJ, Jauker, B, Hernández, FJ, Johnson, MF, Jolli, V, Jonsell, M, Juliani, SN, Jung, TS, Kapoor, V, Kappes, H, Kati, V, Katovai, E, Kellner, K, Kessler, M, Kirby, KR, Kittle, AM, Knight, ME, Knop, E, Kohler, F, Koivula, M, Kolb, A, Kone, M, Kőrösi, Á, Krauss, J, Kumar, A, Kumar, R, Kurz, DJ, Kutt, AS, Lachat, T, Lantschner, V, Lara, F, Lasky, JR, Latta, SC, Laurance, WF, Lavelle, P, Le Féon, V, LeBuhn, G, Légaré, J-P, Lehouck, V, Lencinas, MV, Lentini, PE, Letcher, SG, Li, Q, Litchwark, SA, Littlewood, NA, Liu, Y, Lo-Man-Hung, N, López-Quintero, CA, Louhaichi, M, Lövei, GL, Lucas-Borja, ME, Luja, VH, Luskin, MS, MacSwiney G, MC, Maeto, K, Magura, T, Mallari, NA, Malone, LA, Malonza, PK, Malumbres-Olarte, J, Mandujano, S, Måren, IE, Marin-Spiotta, E, Marsh, CJ, Marshall, EJP, Martínez, E, Martínez Pastur, G, Moreno Mateos, D, Mayfield, MM, Mazimpaka, V, McCarthy, JL, McCarthy, KP, McFrederick, QS, McNamara, S, Medina, NG, Medina, R, Mena, JL, Mico, E, Mikusinski, G, Milder, JC, Miller, JR, Miranda-Esquivel, DR, Moir, ML, Morales, CL, Muchane, MN, Muchane, M, Mudri-Stojnic, S, Munira, AN, Muoñz-Alonso, A, Munyekenye, BF, Naidoo, R, Naithani, A, Nakagawa, M, Nakamura, A, Nakashima, Y, Naoe, S, Nates-Parra, G, Navarrete Gutierrez, DA, Navarro-Iriarte, L, Ndang'ang'a, PK, Neuschulz, EL, Ngai, JT, Nicolas, V, Nilsson, SG, Noreika, N, Norfolk, O, Noriega, JA, Norton, DA, Nöske, NM, Nowakowski, AJ, Numa, C, O'Dea, N, O'Farrell, PJ, Oduro, W, Oertli, S, Ofori-Boateng, C, Oke, CO, Oostra, V, Osgathorpe, LM, Otavo, SE, Page, NV, Paritsis, J, Parra-H, A, Parry, L, Pe'er, G, Pearman, PB, Pelegrin, N, Pélissier, R, Peres, CA, Peri, PL, Persson, AS, Petanidou, T, Peters, MK, Pethiyagoda, RS, Phalan, B, Philips, TK, Pillsbury, FC, Pincheira-Ulbrich, J, Pineda, E, Pino, J, Pizarro-Araya, J, Plumptre, AJ, Poggio, SL, Politi, N, Pons, P, Poveda, K, Power, EF, Presley, SJ, Proença, V, Quaranta, M, Quintero, C, Rader, R, Ramesh, BR, Ramirez-Pinilla, MP, Ranganathan, J, Rasmussen, C, Redpath-Downing, NA, Reid, JL, Reis, YT, Rey Benayas, JM, Rey-Velasco, JC, Reynolds, C, Ribeiro, DB, Richards, MH, Richardson, BA, Richardson, MJ, Ríos, RM, Robinson, R, Robles, CA, Römbke, J, Romero-Duque, LP, Rös, M, Rosselli, L, Rossiter, SJ, Roth, DS, Roulston, TH, Rousseau, L, Rubio, AV, Ruel, J-C, Sadler, JP, Sáfián, S, Saldaña-Vázquez, RA, Sam, K, Samnegård, U, Santana, J, Santos, X, Savage, J, Schellhorn, NA, Schilthuizen, M, Schmiedel, U, Schmitt, CB, Schon, NL, Schüepp, C, Schumann, K, Schweiger, O, Scott, DM, Scott, KA, Sedlock, JL, Seefeldt, SS, Shahabuddin, G, Shannon, G, Sheil, D, Sheldon, FH, Shochat, E, Siebert, SJ, Silva, FAB, Simonetti, JA, Slade, EM, Smith, J, Smith-Pardo, AH, Sodhi, NS, Somarriba, EJ, Sosa, RA, Soto Quiroga, G, St-Laurent, M-H, Starzomski, BM, Stefanescu, C, Steffan-Dewenter, I, Stouffer, PC, Stout, JC, Strauch, AM, Struebig, MJ, Su, Z, Suarez-Rubio, M, Sugiura, S, Summerville, KS, Sung, Y-H, Sutrisno, H, Svenning, J-C, Teder, T, Threlfall, CG, Tiitsaar, A, Todd, JH, Tonietto, RK, Torre, I, Tóthmérész, B, Tscharntke, T, Turner, EC, Tylianakis, JM, Uehara-Prado, M, Urbina-Cardona, N, Vallan, D, Vanbergen, AJ, Vasconcelos, HL, Vassilev, K, Verboven, HAF, Verdasca, MJ, Verdú, JR, Vergara, CH, Vergara, PM, Verhulst, J, Virgilio, M, Vu, LV, Waite, EM, Walker, TR, Wang, H-F, Wang, Y, Watling, JI, Weller, B, Wells, K, Westphal, C, Wiafe, ED, Williams, CD, Willig, MR, Woinarski, JCZ, Wolf, JHD, Wolters, V, Woodcock, BA, Wu, J, Wunderle, JM, Yamaura, Y, Yoshikura, S, Yu, DW, Zaitsev, AS, Zeidler, J, Zou, F, Collen, B, Ewers, RM, Mace, GM, Purves, DW, Scharlemann, JPW, Purvis, A, The Natural History Museum [London] (NHM), United Nations Environment Programme World Conservation Monitoring Centre, Department of Genetics, Evolution and Environment, Centre for Biodiversity and Environment, Research, University College of London [London] (UCL), Department of Life Sciences [Trieste], Università degli studi di Trieste, Imperial College London, Department of Zoology, Auburn University (AU), Frankfurt Zoological Society, Science and Solutions for a Changing Planet DTP and the Department of Life Sciences, Centre d’étude de la forêt, Université Laval, School of Life Sciences, University of Sussex, School of Biological Sciences [London], Queen Mary University of London (QMUL), School of Biological and Ecological Sciences, University of Stirling, School of Biological Sciences [Egham), Royal Holloway [University of London] (RHUL), School of Environment, Natural Resources and Geography, Bangor University, University College London (UCL), School of Biological Sciences [Clayton], Monash University [Clayton], Institute of Biological and Environmental Sciences, (SFIRC), Evolutionary Ecology Group, University of Antwerp (UA), Nees Institute for Plant Biodiversity, Rheinische Friedrich-Wilhelms-Universität Bonn, Wildlife and Range Management Department, Faculty of Renewable Natural Resources, College of Agriculture and Natural Resources (CANR), Kwame Nkrumah University of Science and Technology (KNUST), Save the frogs!, Escuela de Biología, Universidad Nacional de Costa Rica, Instituto Nacional de Investigaciones en Biodiversidad y Medioambiente [Bariloche] (INIBIOMA-CONICET), Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Universidad Nacional del Comahue [Neuquén] (UNCOMA), Departamento de Botánica, Facultad de Farmacia, Universidad de Valencia, Marine Laboratory, Silliman University-Angelo King Center for Research and Environmental Management, Silliman University, Department of Soil and Water Conservation, Centro de Edafologia y Biologia Aplicada del Segura, SAD Paysage (SAD Paysage), Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, Dynamiques Forestières dans l'Espace Rural (DYNAFOR), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Supérieure Agronomique de Toulouse-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA), Unité Mixte de Recherches sur les Herbivores - UMR 1213 (UMRH), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de la Recherche Agronomique (INRA), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Abeilles et Environnement (AE), Institut National de la Recherche Agronomique (INRA)-Avignon Université (AU), Patrimoines locaux, Environnement et Globalisation (PALOC), Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU), Università degli studi di Trieste = University of Trieste, Université Laval [Québec] (ULaval), Institut National de la Recherche Agronomique (INRA)-École nationale supérieure agronomique de Toulouse (ENSAT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT), Unité Mixte de Recherche sur les Herbivores - UMR 1213 (UMRH), Institut National de la Recherche Agronomique (INRA)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS), The Royal Society, Natural Environment Research Council (NERC), Kwame Nkrumah University of Science and Technology [GHANA] (KNUST), AGROCAMPUS OUEST, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de la Recherche Agronomique (INRA), Institut National de la Recherche Agronomique (INRA)-École nationale supérieure agronomique de Toulouse [ENSAT]-Institut National Polytechnique (Toulouse) (Toulouse INP), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Institut National de la Recherche Agronomique (INRA)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut National de la Recherche Agronomique (INRA)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Westerdijk Fungal Biodiversity Institute, Westerdijk Fungal Biodiversity Institute - Yeast Research, Hudson, Lawrence N [0000-0003-4072-7469], Choimes, Argyrios [0000-0002-9849-1500], Jung, Martin [0000-0002-7569-1390], Apollo - University of Cambridge Repository, Hudson, Lawrence N, Newbold, Tim, Contu, Sara, Hill, Samantha L. L., Lysenko, Igor, De Palma, Adriana, Phillips, Helen R. P., Alhusseini, Tamera I., Bedford, Felicity E., Bennett, Dominic J., Booth, Hollie, Burton, Victoria J., Chng, Charlotte W. T., Choimes, Argyrio, Correia, David L. P., Day, Julie, Echeverría Londoño, Susy, Emerson, Susan R., Gao, Di, Garon, Morgan, Harrison, Michelle L. K., Ingram, Daniel J., Jung, Martin, Kemp, Victoria, Kirkpatrick, Lucinda, Martin, Callum D., Pan, Yuan, Pask Hale, Gwilym D., Pynegar, Edwin L., Robinson, Alexandra N., Sanchez Ortiz, Katia, Senior, Rebecca A., Simmons, Benno I., White, Hannah J., Zhang, Hanbin, Aben, Job, Abrahamczyk, Stefan, Adum, Gilbert B., Aguilar Barquero, Virginia, Aizen, Marcelo A., Albertos, Belén, Alcala, E. L., del Mar Alguacil, Maria, Alignier, Audrey, Ancrenaz, Marc, Andersen, Alan N., Arbeláez Cortés, Enrique, Armbrecht, Inge, Arroyo Rodríguez, Víctor, Aumann, Tom, Axmacher, Jan C., Azhar, Badrul, Azpiroz, Adrián B., Baeten, Lander, Bakayoko, Adama, Báldi, Andrá, Banks, John E., Baral, Sharad K., Barlow, Jo, Barratt, Barbara I. P., Barrico, Lurde, Bartolommei, Paola, Barton, Diane M., Basset, Yve, Batáry, Péter, Bates, Adam J., Baur, Bruno, Bayne, Erin M., Beja, Pedro, Benedick, Suzan, Berg, Åke, Bernard, Henry, Berry, Nicholas J., Bhatt, Dinesh, Bicknell, Jake E., Bihn, Jochen H., Blake, Robin J., Bobo, Kadiri S., Bóçon, Roberto, Boekhout, Teun, Böhning Gaese, Katrin, Bonham, Kevin J., Borges, Paulo A. V., Borges, Sérgio H., Boutin, Céline, Bouyer, Jérémy, Bragagnolo, Cibele, Brandt, Jodi S., Brearley, Francis Q., Brito, Isabel, Bros, Vicenç, Brunet, Jörg, Buczkowski, Grzegorz, Buddle, Christopher M., Bugter, Rob, Buscardo, Erika, Buse, Jörn, Cabra García, Jimmy, Cáceres, Nilton C., Cagle, Nicolette L., Calviño Cancela, María, Cameron, Sydney A., Cancello, Eliana M., Caparrós, Rut, Cardoso, Pedro, Carpenter, Dan, Carrijo, Tiago F., Carvalho, Anelena L., Cassano, Camila R., Castro, Helena, Castro Luna, Alejandro A., Rolando, Cerda B., Cerezo, Alexi, Chapman, Kim Alan, Chauvat, Matthieu, Christensen, Morten, Clarke, Francis M., Cleary, Daniel F. R., Colombo, Giorgio, Connop, Stuart P., Craig, Michael D., Cruz López, Leopoldo, Cunningham, Saul A., D'Aniello, Biagio, D'Cruze, Neil, da Silva, Pedro Giovâni, Dallimer, Martin, Danquah, Emmanuel, Darvill, Ben, Dauber, Jen, Davis, Adrian L. V., Dawson, Jeff, de Sassi, Claudio, de Thoisy, Benoit, Deheuvels, Olivier, Dejean, Alain, Devineau, Jean Loui, Diekötter, Tim, Dolia, Jignasu V., Domínguez, Erwin, Dominguez Haydar, Yamileth, Dorn, Silvia, Draper, Isabel, Dreber, Niel, Dumont, Bertrand, Dures, Simon G., Dynesius, Mat, Edenius, Lar, Eggleton, Paul, Eigenbrod, Felix, Elek, Zoltán, Entling, Martin H., Esler, Karen J., de Lima, Ricardo F., Faruk, Aisyah, Farwig, Nina, Fayle, Tom M., Felicioli, Antonio, Felton, Annika M., Fensham, Roderick J., Fernandez, Ignacio C., Ferreira, Catarina C., Ficetola, Gentile F., Fiera, Cristina, Filgueiras, Bruno K. C., Fırıncıoğlu, Hüseyin K., Flaspohler, David, Floren, Andrea, Fonte, Steven J., Fournier, Anne, Fowler, Robert E., Franzén, Marku, Fraser, Lauchlan H., Fredriksson, Gabriella M., Freire, Geraldo B., Frizzo, Tiago L. M., Fukuda, Daisuke, Furlani, Dario, Gaigher, René, Ganzhorn, Jörg U., García, Karla P., Garcia R, Juan C., Garden, Jenni G., Garilleti, Ricardo, Ge, Bao Ming, Gendreau Berthiaume, Benoit, Gerard, Philippa J., Gheler Costa, Carla, Gilbert, Benjamin, Giordani, Paolo, Giordano, Simonetta, Golodets, Carly, Gomes, Laurens G. L., Gould, Rachelle K., Goulson, Dave, Gove, Aaron D., Granjon, Laurent, Grass, Ingo, Gray, Claudia L., Grogan, Jame, Gu, Weibin, Guardiola, Moisè, Gunawardene, Nihara R., Gutierrez, Alvaro G., Gutiérrez Lamus, Doris L., Haarmeyer, Daniela H., Hanley, Mick E., Hanson, Thor, Hashim, Nor R., Hassan, Shombe N., Hatfield, Richard G., Hawes, Joseph E., Hayward, Matt W., Hébert, Christian, Helden, Alvin J., Henden, John André, Henschel, Philipp, Hernández, Lionel, Herrera, James P., Herrmann, Farina, Herzog, Felix, Higuera Diaz, Diego, Hilje, Branko, Höfer, Hubert, Hoffmann, Anke, Horgan, Finbarr G., Hornung, Elisabeth, Horváth, Roland, Hylander, Kristoffer, Isaacs Cubides, Paola, Ishida, Hiroaki, Ishitani, Masahiro, Jacobs, Carmen T., Jaramillo, Víctor J., Jauker, Birgit, Hernández, F. Jiménez, Johnson, McKenzie F., Jolli, Virat, Jonsell, Mat, Juliani, S. Nur, Jung, Thomas S., Kapoor, Vena, Kappes, Heike, Kati, Vassiliki, Katovai, Eric, Kellner, Klau, Kessler, Michael, Kirby, Kathryn R., Kittle, Andrew M., Knight, Mairi E., Knop, Eva, Kohler, Florian, Koivula, Matti, Kolb, Annette, Kone, Mouhamadou, Kőrösi, Ádám, Krauss, Jochen, Kumar, Ajith, Kumar, Raman, Kurz, David J., Kutt, Alex S., Lachat, Thibault, Lantschner, Victoria, Lara, Francisco, Lasky, Jesse R., Latta, Steven C., Laurance, William F., Lavelle, Patrick, Le Féon, Violette, Lebuhn, Gretchen, Légaré, Jean Philippe, Lehouck, Valérie, Lencinas, María V., Lentini, Pia E., Letcher, Susan G., Li, Qi, Litchwark, Simon A., Littlewood, Nick A., Liu, Yunhui, Lo Man Hung, Nancy, López Quintero, Carlos A., Louhaichi, Mounir, Lövei, Gabor L., Lucas Borja, Manuel Esteban, Luja, Victor H., Luskin, Matthew S., MacSwiney G, M. Cristina, Maeto, Kaoru, Magura, Tibor, Mallari, Neil Aldrin, Malone, Louise A., Malonza, Patrick K., Malumbres Olarte, Jagoba, Mandujano, Salvador, Måren, Inger E., Marin Spiotta, Erika, Marsh, Charles J., Marshall, E. J. P., Martínez, Eliana, Martínez Pastur, Guillermo, Moreno Mateos, David, Mayfield, Margaret M., Mazimpaka, Vicente, Mccarthy, Jennifer L., Mccarthy, Kyle P., Mcfrederick, Quinn S., Mcnamara, Sean, Medina, Nagore G., Medina, Rafael, Mena, Jose L., Mico, Estefania, Mikusinski, Grzegorz, Milder, Jeffrey C., Miller, James R., Miranda Esquivel, Daniel R., Moir, Melinda L., Morales, Carolina L., Muchane, Mary N., Muchane, Muchai, Mudri Stojnic, Sonja, Munira, A. Nur, Muoñz Alonso, Antonio, Munyekenye, B. F., Naidoo, Robin, Naithani, A., Nakagawa, Michiko, Nakamura, Akihiro, Nakashima, Yoshihiro, Naoe, Shoji, Nates Parra, Guiomar, Navarrete Gutierrez, Dario A., Navarro Iriarte, Lui, Ndang'Ang'A, Paul K., Neuschulz, Eike L., Ngai, Jacqueline T., Nicolas, Violaine, Nilsson, Sven G., Noreika, Norberta, Norfolk, Olivia, Noriega, Jorge Ari, Norton, David A., Nöske, Nicole M., Nowakowski, A. Justin, Numa, Catherine, O'Dea, Niall, O'Farrell, Patrick J., Oduro, William, Oertli, Sabine, Ofori Boateng, Caleb, Oke, Christopher Omamoke, Oostra, Vicencio, Osgathorpe, Lynne M., Otavo, Samuel Eduardo, Page, Navendu V., Paritsis, Juan, Parra H, Alejandro, Parry, Luke, Pe'Er, Guy, Pearman, Peter B., Pelegrin, Nicolá, Pélissier, Raphaël, Peres, Carlos A., Peri, Pablo L., Persson, Anna S., Petanidou, Theodora, Peters, Marcell K., Pethiyagoda, Rohan S., Phalan, Ben, Philips, T. Keith, Pillsbury, Finn C., Pincheira Ulbrich, Jimmy, Pineda, Eduardo, Pino, Joan, Pizarro Araya, Jaime, Plumptre, A. J., Poggio, Santiago L., Politi, Natalia, Pons, Pere, Poveda, Katja, Power, Eileen F., Presley, Steven J., Proença, Vânia, Quaranta, Marino, Quintero, Carolina, Rader, Romina, Ramesh, B. R., Ramirez Pinilla, Martha P., Ranganathan, Jai, Rasmussen, Clau, Redpath Downing, Nicola A., Reid, J. Leighton, Reis, Yana T., Rey Benayas, José M., Rey Velasco, Juan Carlo, Reynolds, Chevonne, Ribeiro, Danilo Bandini, Richards, Miriam H., Richardson, Barbara A., Richardson, Michael J., Ríos, Rodrigo Macip, Robinson, Richard, Robles, Carolina A., Römbke, Jörg, Romero Duque, Luz Piedad, Rös, Matthia, Rosselli, Loreta, Rossiter, Stephen J., Roth, Dana S., Roulston, T'ai H., Rousseau, Laurent, Rubio, André V., Ruel, Jean Claude, Sadler, Jonathan P., Sáfián, Szabolc, Saldaña Vázquez, Romeo A., Sam, Katerina, Samnegård, Ulrika, Santana, Joana, Santos, Xavier, Savage, Jade, Schellhorn, Nancy A., Schilthuizen, Menno, Schmiedel, Ute, Schmitt, Christine B., Schon, Nicole L., Schüepp, Christof, Schumann, Katharina, Schweiger, Oliver, Scott, Dawn M., Scott, Kenneth A., Sedlock, Jodi L., Seefeldt, Steven S., Shahabuddin, Ghazala, Shannon, Graeme, Sheil, Dougla, Sheldon, Frederick H., Shochat, Eyal, Siebert, Stefan J., Silva, Fernando A. B., Simonetti, Javier A., Slade, Eleanor M., Smith, Jo, Smith Pardo, Allan H., Sodhi, Navjot S., Somarriba, Eduardo J., Sosa, Ramón A., Soto Quiroga, Grimaldo, St Laurent, Martin Hugue, Starzomski, Brian M., Stefanescu, Constanti, Steffan Dewenter, Ingolf, Stouffer, Philip C., Stout, Jane C., Strauch, Ayron M., Struebig, Matthew J., Su, Zhimin, Suarez Rubio, Marcela, Sugiura, Shinji, Summerville, Keith S., Sung, Yik Hei, Sutrisno, Hari, Svenning, Jens Christian, Teder, Tiit, Threlfall, Caragh G., Tiitsaar, Anu, Todd, Jacqui H., Tonietto, Rebecca K., Torre, Ignasi, Tóthmérész, Béla, Tscharntke, Teja, Turner, Edgar C., Tylianakis, Jason M., Uehara Prado, Marcio, Urbina Cardona, Nicola, Vallan, Deni, Vanbergen, Adam J., Vasconcelos, Heraldo L., Vassilev, Kiril, Verboven, Hans A. F., Verdasca, Maria João, Verdú, José R., Vergara, Carlos H., Vergara, Pablo M., Verhulst, Jort, Virgilio, Massimiliano, Vu, Lien Van, Waite, Edward M., Walker, Tony R., Wang, Hua Feng, Wang, Yanping, Watling, James I., Weller, Britta, Wells, Konstan, Westphal, Catrin, Wiafe, Edward D., Williams, Christopher D., Willig, Michael R., Woinarski, John C. Z., Wolf, Jan H. D., Wolters, Volkmar, Woodcock, Ben A., Wu, Jihua, Wunderle, Joseph M., Yamaura, Yuichi, Yoshikura, Satoko, Yu, Douglas W., Zaitsev, Andrey S., Zeidler, Juliane, Zou, Fasheng, Collen, Ben, Ewers, Rob M., Mace, Georgina M., Purves, Drew W., Scharlemann, Jörn P. W., Purvis, Andy, Centre National de la Recherche Scientifique - CNRS (FRANCE), Institut National Polytechnique de Toulouse - INPT (FRANCE), Institut National de la Recherche Agronomique - INRA (FRANCE), Université Toulouse III - Paul Sabatier - UT3 (FRANCE), Institut National Polytechnique de Toulouse - Toulouse INP (FRANCE), Natural History Museum, 3Department of Genetics, Evolution and Environment, Centre for Biodiversity and Environment, Research, University College London ( UCL ), Department of Life Sciences, Universita di Trieste, Auburn University, Queen Mary University of London ( QMUL ), Royal Holloway [University of London] ( RHUL ), ( SFIRC ), University of Antwerp ( UA ), University of Bonn (Rheinische Friedrich-Wilhelms), Kwame Nkrumah University of Science and Technology ( KNUST ), Universidad de Costa Rica, Laboratorio Ecotono-CRUB, Universidad Nacional del Comahue, SAD Paysage ( SAD Paysage ), Institut National de la Recherche Agronomique ( INRA ) -AGROCAMPUS OUEST, Dynamiques Forestières dans l'Espace Rural ( DYNAFOR ), Institut National Polytechnique [Toulouse] ( INP ) -Institut National de la Recherche Agronomique ( INRA ) -Ecole Nationale Supérieure Agronomique de Toulouse, Contrôle des maladies animales exotiques et émergentes [Montpellier] ( CMAEE ), Institut National de la Recherche Agronomique ( INRA ) -Centre de coopération internationale en recherche agronomique pour le développement [CIRAD] : UMR15, Unité Mixte de Recherches sur les Herbivores ( UMR 1213 Herbivores ), VetAgro Sup ( VAS ) -AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de la Recherche Agronomique ( INRA ), Centre de Biologie pour la Gestion des Populations ( CBGP ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -Université de Montpellier ( UM ) -Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), Abeilles et Environnement ( AE ), and Institut National de la Recherche Agronomique ( INRA ) -Université d'Avignon et des Pays de Vaucluse ( UAPV )
- Subjects
VDP::Mathematics and natural science: 400::Zoology and botany: 480::Ecology: 488 ,Biodiversité et Ecologie ,data sharing ,habitat ,Biológiai tudományok ,Q1 ,BIRD SPECIES RICHNESS ,TROPICAL DRY FOREST ,VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Økologi: 488 ,MEXICAN COFFEE PLANTATIONS ,Természettudományok ,Data and Information ,Milieux et Changements globaux ,LOWLAND ,ComputingMilieux_MISCELLANEOUS ,Original Research ,Ecology ,global biodiversity modeling ,global change ,habitat destruction ,land use ,Ecology, Evolution, Behavior and Systematics ,Nature and Landscape Conservation ,LAND-USE CHANGE ,[ SDE.MCG ] Environmental Sciences/Global Changes ,Chemistry ,Earth and Related Environmental Sciences ,Evolution ,[SDE.MCG]Environmental Sciences/Global Changes ,INTENSIVELY MANAGED FARMLAND ,Ingénierie de l'environnement ,CARABID BEETLE ASSEMBLAGES ,FRUIT-FEEDING BUTTERFLIES ,Ecology and Environment ,Biodiversity and Ecology ,keywords: data sharing ,Behavior and Systematics ,Biology ,Ekologi ,[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology ,QL ,DIPTEROCARP FOREST ,QH ,PLANT COMMUNITY COMPOSITION ,Geovetenskap och miljövetenskap ,Biology and Life Sciences ,destruction ,Ecology, Evolution, Behavior and Systematic ,URBAN-RURAL GRADIENT ,Earth and Environmental Sciences ,Environnement et Société ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
Source at https://doi.org/10.1002/ece3.2579. The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
- Published
- 2017
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8. The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project
- Author
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Hudson, L., Newbold, T., Contu, S., Hill, S., Lysenko, I., De Palma, A., Phillips, H., Alhusseini, T., Bedford, F., Bennett, D., Booth, H., Burton, V., Chng, C., Choimes, A., Correia, D., Day, J., Echeverria-Londono, S., Emerson, S., Gao, D., Garon, M., Harrison, M., Ingram, D., Jung, M., Kemp, V., Kirkpatrick, L., Martin, C., Pan, Y., Pask-Hale, G., Pynegar, E., Robinson, A., Sanchez-Ortiz, K., Senior, R., Simmons, B., White, H., Zhang, H., Aben, J., Abrahamczyk, S., Adum, G., Aguilar-Barquero, V., Aizen, M., Albertos, B., Alcala, E., del Mar Alguacil, M., Alignier, A., Ancrenaz, M., Andersen, A., Arbelaez-Cortes, E., Armbrecht, I., Arroyo-Rodriguez, V., Aumann, T., Axmacher, J., Azhar, B., Azpiroz, A., Baeten, L., Bakayoko, A., Baldi, A., Banks, J., Baral, S., Barlow, J., Barratt, B., Barrico, L., Bartolommei, P., Barton, D., Basset, Y., Batary, P., Bates, A., Baur, B., Bayne, E., Beja, P., Benedick, S., Berg, A., Bernard, H., Berry, N., Bhatt, D., Bicknell, J., Bihn, J., Blake, R., Bobo, K., Bocon, R., Boekhout, T., Bohning-Gaese, K., Bonham, K., Borges, P., Borges, S., Boutin, C., Bouyer, J., Bragagnolo, C., Brandt, J., Brearley, F., Brito, I., Bros, V., Brunet, J., Buczkowski, G., Buddle, C., Bugter, R., Buscardo, E., Buse, J., Cabra-Garcia, J., Caceres, N., Cagle, N., Calvino-Cancela, M., Cameron, S., Cancello, E., Caparros, R., Cardoso, P., Carpenter, D., Carrijo, T., Carvalho, A., Cassano, C., Castro, H., Castro-Luna, A., Cerda, R., Cerezo, A., Chapman, K., Chauvat, M., Christensen, M., Clarke, F., Cleary, D., Colombo, G., Connop, S., Craig, M., Cruz-Lopez, L., Cunningham, S., D'Aniello, B., D'Cruze, N., da Silva, P., Dallimer, M., Danquah, E., Darvill, B., Dauber, J., Davis, A., Dawson, J., de Sassi, C., de Thoisy, B., Deheuvels, O., Dejean, A., Devineau, J., Diekoetter, T., Dolia, J., Dominguez, E., Dominguez-Haydar, Y., Dorn, S., Draper, I., Dreber, N., Dumont, B., Dures, S., Dynesius, M., Edenius, L., Eggleton, P., Eigenbrod, F., Elek, Z., Entling, M., Esler, K., De Lima, R., Faruk, A., Farwig, N., Fayle, T., Felicioli, A., Felton, A., Fensham, R., Fernandez, I., Ferreira, C., Ficetola, G., Fiera, C., Filgueiras, B., Firincioglu, H., Flaspohler, D., Floren, A., Fonte, S., Fournier, A., Fowler, R., Franzen, M., Fraser, L., Fredriksson, G., Freire-, G., Frizzo, T., Fukuda, D., Furlani, D., Gaigher, R., Ganzhorn, J., Garcia, K., Garcia-R, J., Garden, J., Garilleti, R., Ge, B., Gendreau-Berthiaume, B., Gerard, P., Gheler-Costa, C., Gilbert, B., Giordani, P., Giordano, S., Golodets, C., Gomes, L., Gould, R., Goulson, D., Gove, Aaron, Granjon, L., Grass, I., Gray, C., Grogan, J., Gu, W., Guardiola, M., Gunawardene, Nihara, Gutierrez, A., Gutierrez-Lamus, D., Haarmeyer, D., Hanley, M., Hanson, T., Hashim, N., Hassan, S., Hatfield, R., Hawes, J., Hayward, M., Hebert, C., Helden, A., Henden, J., Henschel, P., Hernandez, L., Herrera, J., Herrmann, F., Herzog, F., Higuera-Diaz, D., Hilje, B., Hofer, H., Hoffmann, A., Horgan, F., Hornung, E., Horvath, R., Hylander, K., Isaacs-Cubides, P., Ishida, H., Ishitani, M., Jacobs, C., Jaramillo, V., Jauker, B., Jimenez Hernandez, F., Johnson, M., Jolli, V., Jonsell, M., Juliani, S., Jung, T., Kapoor, V., Kappes, H., Kati, V., Katovai, E., Kellner, K., Kessler, M., Kirby, K., Kittle, A., Knight, M., Knop, E., Kohler, F., Koivula, M., Kolb, A., Kone, M., Koroesi, A., Krauss, J., Kumar, A., Kumar, R., Kurz, D., Kutt, A., Lachat, T., Lantschner, V., Lara, F., Lasky, J., Latta, S., Laurance, W., Lavelle, P., Le Feon, V., LeBuhn, G., Legare, J., Lehouck, V., Lencinas, M., Lentini, P., Letcher, S., Li, Q., Litchwark, S., Littlewood, N., Liu, Y., Lo-Man-Hung, N., Lopez-Quintero, C., Louhaichi, M., Lovei, G., Lucas-Borja, M., Luja, V., Luskin, M., MacSwiney G, M., Maeto, K., Magura, T., Mallari, N., Malone, L., Malonza, P., Malumbres-Olarte, J., Mandujano, S., Maren, I., Marin-Spiotta, E., Marsh, C., Marshall, E., Martinez, E., Pastur, G., Mateos, D., Mayfield, M., Mazimpaka, V., McCarthy, J., McCarthy, K., McFrederick, Q., McNamara, S., Medina, N., Medina, R., Mena, J., Mico, E., Mikusinski, G., Milder, J., Miller, J., Miranda-Esquivel, D., Moir, M., Morales, C., Muchane, M., Mudri-Stojnic, S., Munira, A., Muonz-Alonso, A., Munyekenye, B., Naidoo, R., Naithani, A., Nakagawa, M., Nakamura, A., Nakashima, Y., Naoe, S., Nates-Parra, G., Gutierrez, D., Navarro-Iriarte, L., Ndang'ang'a, P., Neuschulz, E., Ngai, J., Nicolas, V., Nilsson, S., Noreika, N., Norfolk, O., Noriega, J., Norton, D., Noeske, N., Nowakowski, A., Numa, C., O'Dea, N., O'Farrell, P., Oduro, W., Oertli, S., Ofori-Boateng, C., Oke, C., Oostra, V., Osgathorpe, L., Eduardo Otavo, S., Page, N., Paritsis, J., Parra-H, A., Parry, L., Pe'er, G., Pearman, P., Pelegrin, N., Pelissier, R., Peres, C., Peri, P., Persson, A., Petanidou, T., Peters, M., Pethiyagoda, R., Phalan, B., Philips, T., Pillsbury, F., Pincheira-Ulbrich, J., Pineda, E., Pino, J., Pizarro-Araya, J., Plumptre, A., Poggio, S., Politi, N., Pons, P., Poveda, K., Power, E., Presley, S., Proenca, V., Quaranta, M., Quintero, C., Rader, R., Ramesh, B., Ramirez-Pinilla, M., Ranganathan, J., Rasmussen, C., Redpath-Downing, N., Reid, J., Reis, Y., Rey Benayas, J., Carlos Rey-Velasco, J., Reynolds, C., Ribeiro, D., Richards, M., Richardson, B., Richardson, M., Macip Rios, R., Robinson, R., Robles, C., Roembke, J., Romero-Duque, L., Ros, M., Rosselli, L., Rossiter, S., Roth, D., Roulston, T., Rousseau, L., Rubio, A., Ruel, J., Sadler, J., Safian, S., Saldana-Vazquez, R., Sam, K., Samnegard, U., Santana, J., Santos, X., Savage, J., Schellhorn, N., Schilthuizen, M., Schmiedel, U., Schmitt, C., Schon, N., Schuepp, C., Schumann, K., Schweiger, O., Scott, D., Scott, K., Sedlock, J., Seefeldt, S., Shahabuddin, G., Shannon, G., Sheil, D., Sheldon, F., Shochat, E., Siebert, S., Silva, F., Simonetti, J., Slade, E., Smith, J., Smith-Pardo, A., Sodhi, N., Somarriba, E., Sosa, R., Soto Quiroga, G., St-Laurent, M., Starzomski, B., Stefanescu, C., Steffan-Dewenter, I., Stouffer, P., Stout, J., Strauch, A., Struebig, M., Su, Z., Suarez-Rubio, M., Sugiura, S., Summerville, K., Sung, Y., Sutrisno, H., Svenning, J., Teder, T., Threlfall, C., Tiitsaar, A., Todd, J., Tonietto, R., Torre, I., Tothmeresz, B., Tscharntke, T., Turner, E., Tylianakis, J., Uehara-Prado, M., Urbina-Cardona, N., Vallan, D., Vanbergen, A., Vasconcelos, H., Vassilev, K., Verboven, H., Verdasca, M., Verdu, J., Vergara, C., Vergara, P., Verhulst, J., Virgilio, M., Van Vu, L., Waite, E., Walker, T., Wang, H., Wang, Y., Watling, J., Weller, B., Wells, K., Westphal, C., Wiafe, E., Williams, C., Willig, M., Woinarski, J., Wolf, J., Wolters, V., Woodcock, B., Wu, J., Wunderle, J., Yamaura, Y., Yoshikura, S., Yu, D., Zaitsev, A., Zeidler, J., Zou, F., Collen, B., Ewers, R., Mace, G., Purves, D., Scharlemann, J., Purvis, A., Hudson, L., Newbold, T., Contu, S., Hill, S., Lysenko, I., De Palma, A., Phillips, H., Alhusseini, T., Bedford, F., Bennett, D., Booth, H., Burton, V., Chng, C., Choimes, A., Correia, D., Day, J., Echeverria-Londono, S., Emerson, S., Gao, D., Garon, M., Harrison, M., Ingram, D., Jung, M., Kemp, V., Kirkpatrick, L., Martin, C., Pan, Y., Pask-Hale, G., Pynegar, E., Robinson, A., Sanchez-Ortiz, K., Senior, R., Simmons, B., White, H., Zhang, H., Aben, J., Abrahamczyk, S., Adum, G., Aguilar-Barquero, V., Aizen, M., Albertos, B., Alcala, E., del Mar Alguacil, M., Alignier, A., Ancrenaz, M., Andersen, A., Arbelaez-Cortes, E., Armbrecht, I., Arroyo-Rodriguez, V., Aumann, T., Axmacher, J., Azhar, B., Azpiroz, A., Baeten, L., Bakayoko, A., Baldi, A., Banks, J., Baral, S., Barlow, J., Barratt, B., Barrico, L., Bartolommei, P., Barton, D., Basset, Y., Batary, P., Bates, A., Baur, B., Bayne, E., Beja, P., Benedick, S., Berg, A., Bernard, H., Berry, N., Bhatt, D., Bicknell, J., Bihn, J., Blake, R., Bobo, K., Bocon, R., Boekhout, T., Bohning-Gaese, K., Bonham, K., Borges, P., Borges, S., Boutin, C., Bouyer, J., Bragagnolo, C., Brandt, J., Brearley, F., Brito, I., Bros, V., Brunet, J., Buczkowski, G., Buddle, C., Bugter, R., Buscardo, E., Buse, J., Cabra-Garcia, J., Caceres, N., Cagle, N., Calvino-Cancela, M., Cameron, S., Cancello, E., Caparros, R., Cardoso, P., Carpenter, D., Carrijo, T., Carvalho, A., Cassano, C., Castro, H., Castro-Luna, A., Cerda, R., Cerezo, A., Chapman, K., Chauvat, M., Christensen, M., Clarke, F., Cleary, D., Colombo, G., Connop, S., Craig, M., Cruz-Lopez, L., Cunningham, S., D'Aniello, B., D'Cruze, N., da Silva, P., Dallimer, M., Danquah, E., Darvill, B., Dauber, J., Davis, A., Dawson, J., de Sassi, C., de Thoisy, B., Deheuvels, O., Dejean, A., Devineau, J., Diekoetter, T., Dolia, J., Dominguez, E., Dominguez-Haydar, Y., Dorn, S., Draper, I., Dreber, N., Dumont, B., Dures, S., Dynesius, M., Edenius, L., Eggleton, P., Eigenbrod, F., Elek, Z., Entling, M., Esler, K., De Lima, R., Faruk, A., Farwig, N., Fayle, T., Felicioli, A., Felton, A., Fensham, R., Fernandez, I., Ferreira, C., Ficetola, G., Fiera, C., Filgueiras, B., Firincioglu, H., Flaspohler, D., Floren, A., Fonte, S., Fournier, A., Fowler, R., Franzen, M., Fraser, L., Fredriksson, G., Freire-, G., Frizzo, T., Fukuda, D., Furlani, D., Gaigher, R., Ganzhorn, J., Garcia, K., Garcia-R, J., Garden, J., Garilleti, R., Ge, B., Gendreau-Berthiaume, B., Gerard, P., Gheler-Costa, C., Gilbert, B., Giordani, P., Giordano, S., Golodets, C., Gomes, L., Gould, R., Goulson, D., Gove, Aaron, Granjon, L., Grass, I., Gray, C., Grogan, J., Gu, W., Guardiola, M., Gunawardene, Nihara, Gutierrez, A., Gutierrez-Lamus, D., Haarmeyer, D., Hanley, M., Hanson, T., Hashim, N., Hassan, S., Hatfield, R., Hawes, J., Hayward, M., Hebert, C., Helden, A., Henden, J., Henschel, P., Hernandez, L., Herrera, J., Herrmann, F., Herzog, F., Higuera-Diaz, D., Hilje, B., Hofer, H., Hoffmann, A., Horgan, F., Hornung, E., Horvath, R., Hylander, K., Isaacs-Cubides, P., Ishida, H., Ishitani, M., Jacobs, C., Jaramillo, V., Jauker, B., Jimenez Hernandez, F., Johnson, M., Jolli, V., Jonsell, M., Juliani, S., Jung, T., Kapoor, V., Kappes, H., Kati, V., Katovai, E., Kellner, K., Kessler, M., Kirby, K., Kittle, A., Knight, M., Knop, E., Kohler, F., Koivula, M., Kolb, A., Kone, M., Koroesi, A., Krauss, J., Kumar, A., Kumar, R., Kurz, D., Kutt, A., Lachat, T., Lantschner, V., Lara, F., Lasky, J., Latta, S., Laurance, W., Lavelle, P., Le Feon, V., LeBuhn, G., Legare, J., Lehouck, V., Lencinas, M., Lentini, P., Letcher, S., Li, Q., Litchwark, S., Littlewood, N., Liu, Y., Lo-Man-Hung, N., Lopez-Quintero, C., Louhaichi, M., Lovei, G., Lucas-Borja, M., Luja, V., Luskin, M., MacSwiney G, M., Maeto, K., Magura, T., Mallari, N., Malone, L., Malonza, P., Malumbres-Olarte, J., Mandujano, S., Maren, I., Marin-Spiotta, E., Marsh, C., Marshall, E., Martinez, E., Pastur, G., Mateos, D., Mayfield, M., Mazimpaka, V., McCarthy, J., McCarthy, K., McFrederick, Q., McNamara, S., Medina, N., Medina, R., Mena, J., Mico, E., Mikusinski, G., Milder, J., Miller, J., Miranda-Esquivel, D., Moir, M., Morales, C., Muchane, M., Mudri-Stojnic, S., Munira, A., Muonz-Alonso, A., Munyekenye, B., Naidoo, R., Naithani, A., Nakagawa, M., Nakamura, A., Nakashima, Y., Naoe, S., Nates-Parra, G., Gutierrez, D., Navarro-Iriarte, L., Ndang'ang'a, P., Neuschulz, E., Ngai, J., Nicolas, V., Nilsson, S., Noreika, N., Norfolk, O., Noriega, J., Norton, D., Noeske, N., Nowakowski, A., Numa, C., O'Dea, N., O'Farrell, P., Oduro, W., Oertli, S., Ofori-Boateng, C., Oke, C., Oostra, V., Osgathorpe, L., Eduardo Otavo, S., Page, N., Paritsis, J., Parra-H, A., Parry, L., Pe'er, G., Pearman, P., Pelegrin, N., Pelissier, R., Peres, C., Peri, P., Persson, A., Petanidou, T., Peters, M., Pethiyagoda, R., Phalan, B., Philips, T., Pillsbury, F., Pincheira-Ulbrich, J., Pineda, E., Pino, J., Pizarro-Araya, J., Plumptre, A., Poggio, S., Politi, N., Pons, P., Poveda, K., Power, E., Presley, S., Proenca, V., Quaranta, M., Quintero, C., Rader, R., Ramesh, B., Ramirez-Pinilla, M., Ranganathan, J., Rasmussen, C., Redpath-Downing, N., Reid, J., Reis, Y., Rey Benayas, J., Carlos Rey-Velasco, J., Reynolds, C., Ribeiro, D., Richards, M., Richardson, B., Richardson, M., Macip Rios, R., Robinson, R., Robles, C., Roembke, J., Romero-Duque, L., Ros, M., Rosselli, L., Rossiter, S., Roth, D., Roulston, T., Rousseau, L., Rubio, A., Ruel, J., Sadler, J., Safian, S., Saldana-Vazquez, R., Sam, K., Samnegard, U., Santana, J., Santos, X., Savage, J., Schellhorn, N., Schilthuizen, M., Schmiedel, U., Schmitt, C., Schon, N., Schuepp, C., Schumann, K., Schweiger, O., Scott, D., Scott, K., Sedlock, J., Seefeldt, S., Shahabuddin, G., Shannon, G., Sheil, D., Sheldon, F., Shochat, E., Siebert, S., Silva, F., Simonetti, J., Slade, E., Smith, J., Smith-Pardo, A., Sodhi, N., Somarriba, E., Sosa, R., Soto Quiroga, G., St-Laurent, M., Starzomski, B., Stefanescu, C., Steffan-Dewenter, I., Stouffer, P., Stout, J., Strauch, A., Struebig, M., Su, Z., Suarez-Rubio, M., Sugiura, S., Summerville, K., Sung, Y., Sutrisno, H., Svenning, J., Teder, T., Threlfall, C., Tiitsaar, A., Todd, J., Tonietto, R., Torre, I., Tothmeresz, B., Tscharntke, T., Turner, E., Tylianakis, J., Uehara-Prado, M., Urbina-Cardona, N., Vallan, D., Vanbergen, A., Vasconcelos, H., Vassilev, K., Verboven, H., Verdasca, M., Verdu, J., Vergara, C., Vergara, P., Verhulst, J., Virgilio, M., Van Vu, L., Waite, E., Walker, T., Wang, H., Wang, Y., Watling, J., Weller, B., Wells, K., Westphal, C., Wiafe, E., Williams, C., Willig, M., Woinarski, J., Wolf, J., Wolters, V., Woodcock, B., Wu, J., Wunderle, J., Yamaura, Y., Yoshikura, S., Yu, D., Zaitsev, A., Zeidler, J., Zou, F., Collen, B., Ewers, R., Mace, G., Purves, D., Scharlemann, J., and Purvis, A.
- Abstract
The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
- Published
- 2017
9. The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project
- Author
-
Hudson, L.N., Newbold, T., Contu, S., Hill, S.L.L., Lysenko, I., De Palma, A., Phillips, H.R.P., Alhusseini, T.I., Bedford, F.E., Bennett, D.J., Booth, H., Burton, V.J., Chng, C.W.T., Choimes, A., Correia, D.L.P., Day, J., Echeverría-Londoño, S., Emerson, S.R., Gao, D., Garon, M., Harrison, M.L.K., Ingram, D.J., Jung, M., Kemp, V., Kirkpatrick, L., Martin, C.D., Pan, Y., Pask-Hale, G.D., Pynegar, E.L., Robinson, A.N., Sanchez-Ortiz, K., Senior, R.A., Simmons, B.I., White, H.J., Zhang, H., Aben, J., Abrahamczyk, S., Adum, G.B., Aguilar-Barquero, V., Aizen, M.A., Albertos, B., Alcala, E.L., del Mar Alguacil, M., Alignier, A., Ancrenaz, M., Andersen, A.N., Arbeláez-Cortés, E., Armbrecht, I., Arroyo-Rodríguez, V., Aumann, T., Axmacher, J.C., Azhar, B., Azpiroz, A.B., Baeten, L., Bakayoko, A., Báldi, A., Banks, J.E., Baral, S.K., Barlow, J., Barratt, B.I.P., Barrico, L., Bartolommei, P., Barton, D.M., Basset, Y., Batáry, P., Bates, A.J., Baur, B., Bayne, E.M., Beja, P., Benedick, S., Berg, A., Bernard, H., Berry, N.J., Bhatt, D., Bicknell, J.E., Bihn, J.H., Blake, R.J., Bobo, K.S., Bóçon, R., Boekhout, T., Böhning-Gaese, K., Bonham, K.J., Borges, P.A.V., Borges, S.H., Boutin, C., Bouyer, J., Bragagnolo, C., Brandt, J.S., Brearley, F.Q., Brito, I., Bros, V., Brunet, J., Buczkowski, G., Buddle, C.M., Bugter, R., Buscardo, E., Buse, J., Cabra-García, J., Cáceres, N.C., Cagle, N.L., Calviño-Cancela, M., Cameron, S.A., Cancello, E.M., Caparrós, R., Cardoso, P., Carpenter, D., Carrijo, T.F., Carvalho, A.L., Cassano, C.R., Castro, H., Castro-Luna, A.A., Rolando, C.B., Cerezo, A., Chapman, K.A., Chauvat, M., Christensen, M., Clarke, F.M., Cleary, D.F.R., Colombo, G., Connop, S.P., Craig, M.D., Cruz-López, L., Cunningham, S.A., D'Aniello, B., D'Cruze, N., da Silva, P.G., Dallimer, M., Danquah, E.Y., Darvill, B., Dauber, J., Davis, A.L.V., Dawson, J., de Sassi, C., de Thoisy, B., Deheuvels, O., Dejean, A., Devineau, J.-L., Diekötter, T., Dolia, J.V., Domínguez, E., Dominguez-Haydar, Y., Dorn, S., Draper, I., Dreber, N., Dumont, B., Dures, S.G., Dynesius, M., Edenius, L., Eggleton, P., Eigenbrod, F., Elek, Z., Entling, M.H., Esler, K.J., de Lima, R.F., Faruk, A., Farwig, N., Fayle, T.M., Felicioli, A., Felton, A.M., Fensham, R.J., Fernandez, I.C., Ferreira, C.C., Ficetola, G.F., Fiera, C., Filgueiras, B.K.C., Fırıncıoğlu, H.K., Flaspohler, D., Floren, A., Fonte, S.J., Fournier, A., Fowler, R.E., Franzén, M., Fraser, L.H., Fredriksson, G.M., Freire, G.B., Frizzo, T.L.M., Fukuda, D., Furlani, D., Gaigher, R., Ganzhorn, J.U., García, K.P., Garcia-R, J.C., Garden, J.G., Garilleti, R., Ge, B.-M., Gendreau-Berthiaume, B., Gerard, P.J., Gheler-Costa, C., Gilbert, B., Giordani, P., Giordano, S., Golodets, C., Gomes, L.G.L., Gould, R.K., Goulson, D., Gove, A.D., Granjon, L., Grass, I., Gray, C.L., Grogan, J., Gu, W., Guardiola, M., Gunawardene, N.R., Gutierrez, A.G., Gutiérrez-Lamus, D.L., Haarmeyer, D.H., Hanley, M.E., Hanson, T., Hashim, N.R., Hassan, S.N., Hatfield, R.G., Hawes, J.E., Hayward, M.W., Hébert, C., Helden, A.J., Henden, J.-A., Henschel, P., Hernández, L., Herrera, J.P., Herrmann, F., Herzog, F., Higuera-Diaz, D., Hilje, B., Hofer, H., Hoffmann, A., Horgan, F.G., Hornung, E., Horváth, R., Hylander, K., Isaacs-Cubides, P., Ishida, H., Ishitani, M., Jacobs, C.T., Jaramillo, V.J., Jauker, B., Hernández, F.J., Johnson, M.F., Jolli, V., Jonsell, M., Juliani, S.N., Jung, T.S., Kapoor, V., Kappes, H., Kati, V., Katovai, E., Kellner, K., Kessler, M., Kirby, K.R., Kittle, A.M., Knight, M.E., Knop, E., Köhler, F., Koivula, M., Kolb, A., Kone, M., Kőrösi, Á., Krauss, J., Kumar, A., Kumar, R., Kurz, D.J., Kutt, A.S., Lachat, T., Lantschner, V., Lara, F., Lasky, J.R., Latta, S.C., Laurance, W.F., Lavelle, P., Le Féon, V., LeBuhn, G., Légaré, J.-P., Lehouck, V., Lencinas, M.V., Lentini, P.E., Letcher, S.G., Li, Q., Litchwark, S.A., Littlewood, N.A., Liu, Y., Lo-Man-Hung, N., López-Quintero, C.A., Louhaichi, M., Lövei, G.L., Lucas-Borja, M.E., Luja, V.H., Luskin, M.S., MacSwiney G, M.C., Maeto, K., Magura, T., Mallari, N.A., Malone, L.A., Malonza, P.K., Malumbres-Olarte, J., Mandujano, S., Måren, I.E., Marin-Spiotta, E., Marsh, C.J., Marshall, E.J.P., Martínez, E., Martínez Pastur, G., Moreno Mateos, D., Mayfield, M.M., Mazimpaka, V., McCarthy, J.L., McCarthy, K.P., McFrederick, Q.S., McNamara, S., Medina, N.G., Medina, R., Mena, J.L., Mico, E., Mikusinski, G., Milder, J.C., Miller, J.R., Miranda-Esquivel, D.R., Moir, M.L., Morales, C.L., Muchane, M.N., Muchane, M., Mudri-Stojnic, S., Munira, A.N., Muoñz-Alonso, A., Munyekenye, B.F., Naidoo, R., Naithani, A., Nakagawa, M., Nakamura, A., Nakashima, Y., Naoe, S., Nates-Parra, G., Navarrete Gutierrez, D.A., Navarro-Iriarte, L., Ndang'ang'a, P.K., Neuschulz, E.L., Ngai, J.T., Nicolas, V., Nilsson, S.G., Noreika, N., Norfolk, O., Noriega, J.A., Norton, D.A., Nöske, N.M., Nowakowski, A.J., Numa, C., O'Dea, N., O'Farrell, P.J., Oduro, W., Oertli, S., Ofori-Boateng, C., Oke, C.O., Oostra, V., Osgathorpe, L.M., Otavo, S.E., Page, N.V., Paritsis, J., Parra-H, A., Parry, L., Pe'er, G., Pearman, P.B., Pelegrin, N., Pélissier, R., Peres, C.A., Peri, P.L., Persson, A.S., Petanidou, T., Peters, M.K., Pethiyagoda, R.S., Phalan, B., Philips, T.K., Pillsbury, F.C., Pincheira-Ulbrich, J., Pineda, E., Pino, J., Pizarro-Araya, J., Plumptre, A. J., Poggio, S.L., Politi, N., Pons, P., Poveda, K., Power, E.F., Presley, S.J., Proença, V., Quaranta, M., Quintero, C., Rader, R., Ramesh, B.R., Ramirez-Pinilla, M.P., Ranganathan, J., Rasmussen, C., Redpath-Downing, N.A., Reid, J.L., Reis, Y.T., Rey Benayas, J.M., Rey-Velasco, J.C., Reynolds, C., Ribeiro, D.B., Richards, M.H., Richardson, B.A., Richardson, M.J., Ríos, R.M., Robinson, R., Robles, C.A., Römbke, J., Romero-Duque, L.P., Rös, M., Rosselli, L., Rossiter, S.J., Roth, D.S., Roulston, T.H., Rousseau, L., Rubio, A.V., Ruel, J.-C., Sadler, J.P., Sáfián, S., Saldaña-Vázquez, R.A., Sam, K., Samnegård, U., Santana, J., Santos, X., Savage, J., Schellhorn, N.A., Schilthuizen, M., Schmiedel, U., Schmitt, C.B., Schon, N.L., Schüepp, C., Schumann, K., Schweiger, O., Scott, D.M., Scott, K.A., Sedlock, J.L., Seefeldt, S.S., Shahabuddin, G., Shannon, G., Sheil, D., Sheldon, F.H., Shochat, E., Siebert, S.J., Silva, F.A.B., Simonetti, J.A., Slade, E.M., Smith, J., Smith-Pardo, A.H., Sodhi, N.S., Somarriba, E.J., Sosa, R.A., Soto Quiroga, G., St-Laurent, M.-H., Starzomski, B.M., Stefanescu, C., Steffan-Dewenter, I., Stouffer, P.C., Stout, J.C., Strauch, A.M., Struebig, M.J., Su, Z., Suarez-Rubio, M., Sugiura, S., Summerville, K.S., Sung, Y.-H., Sutrisno, H., Svenning, J.-C., Teder, T., Threlfall, C.G., Tiitsaar, A., Todd, J.H., Tonietto, R.K., Torre, I., Tóthmérész, B., Tscharntke, T., Turner, E.C., Tylianakis, J.M., Uehara-Prado, M., Urbina-Cardona, N., Vallan, D., Vanbergen, A.J., Vasconcelos, H.L., Vassilev, K., Verboven, H.A.F., Verdasca, M.J., Verdú, J.R., Vergara, C.H., Vergara, P.M., Verhulst, J., Virgilio, M., Vu, L.V., Waite, E.M., Walker, T.R., Wang, H.-F., Wang, Y., Watling, J.I., Weller, B., Wells, K., Westphal, C., Wiafe, E.D., Williams, C.D., Willig, M.R., Woinarski, J.C.Z., Wolf, J.H.D., Wolters, V., Woodcock, B.A., Wu, J., Wunderle, J.M., Yamaura, Y., Yoshikura, S., Yu, D.W., Zaitsev, A.S., Zeidler, J., Zou, F., Collen, B., Ewers, R.M., Mace, G.M., Purves, D.W., Scharlemann, J.P.W., Purvis, A., Hudson, L.N., Newbold, T., Contu, S., Hill, S.L.L., Lysenko, I., De Palma, A., Phillips, H.R.P., Alhusseini, T.I., Bedford, F.E., Bennett, D.J., Booth, H., Burton, V.J., Chng, C.W.T., Choimes, A., Correia, D.L.P., Day, J., Echeverría-Londoño, S., Emerson, S.R., Gao, D., Garon, M., Harrison, M.L.K., Ingram, D.J., Jung, M., Kemp, V., Kirkpatrick, L., Martin, C.D., Pan, Y., Pask-Hale, G.D., Pynegar, E.L., Robinson, A.N., Sanchez-Ortiz, K., Senior, R.A., Simmons, B.I., White, H.J., Zhang, H., Aben, J., Abrahamczyk, S., Adum, G.B., Aguilar-Barquero, V., Aizen, M.A., Albertos, B., Alcala, E.L., del Mar Alguacil, M., Alignier, A., Ancrenaz, M., Andersen, A.N., Arbeláez-Cortés, E., Armbrecht, I., Arroyo-Rodríguez, V., Aumann, T., Axmacher, J.C., Azhar, B., Azpiroz, A.B., Baeten, L., Bakayoko, A., Báldi, A., Banks, J.E., Baral, S.K., Barlow, J., Barratt, B.I.P., Barrico, L., Bartolommei, P., Barton, D.M., Basset, Y., Batáry, P., Bates, A.J., Baur, B., Bayne, E.M., Beja, P., Benedick, S., Berg, A., Bernard, H., Berry, N.J., Bhatt, D., Bicknell, J.E., Bihn, J.H., Blake, R.J., Bobo, K.S., Bóçon, R., Boekhout, T., Böhning-Gaese, K., Bonham, K.J., Borges, P.A.V., Borges, S.H., Boutin, C., Bouyer, J., Bragagnolo, C., Brandt, J.S., Brearley, F.Q., Brito, I., Bros, V., Brunet, J., Buczkowski, G., Buddle, C.M., Bugter, R., Buscardo, E., Buse, J., Cabra-García, J., Cáceres, N.C., Cagle, N.L., Calviño-Cancela, M., Cameron, S.A., Cancello, E.M., Caparrós, R., Cardoso, P., Carpenter, D., Carrijo, T.F., Carvalho, A.L., Cassano, C.R., Castro, H., Castro-Luna, A.A., Rolando, C.B., Cerezo, A., Chapman, K.A., Chauvat, M., Christensen, M., Clarke, F.M., Cleary, D.F.R., Colombo, G., Connop, S.P., Craig, M.D., Cruz-López, L., Cunningham, S.A., D'Aniello, B., D'Cruze, N., da Silva, P.G., Dallimer, M., Danquah, E.Y., Darvill, B., Dauber, J., Davis, A.L.V., Dawson, J., de Sassi, C., de Thoisy, B., Deheuvels, O., Dejean, A., Devineau, J.-L., Diekötter, T., Dolia, J.V., Domínguez, E., Dominguez-Haydar, Y., Dorn, S., Draper, I., Dreber, N., Dumont, B., Dures, S.G., Dynesius, M., Edenius, L., Eggleton, P., Eigenbrod, F., Elek, Z., Entling, M.H., Esler, K.J., de Lima, R.F., Faruk, A., Farwig, N., Fayle, T.M., Felicioli, A., Felton, A.M., Fensham, R.J., Fernandez, I.C., Ferreira, C.C., Ficetola, G.F., Fiera, C., Filgueiras, B.K.C., Fırıncıoğlu, H.K., Flaspohler, D., Floren, A., Fonte, S.J., Fournier, A., Fowler, R.E., Franzén, M., Fraser, L.H., Fredriksson, G.M., Freire, G.B., Frizzo, T.L.M., Fukuda, D., Furlani, D., Gaigher, R., Ganzhorn, J.U., García, K.P., Garcia-R, J.C., Garden, J.G., Garilleti, R., Ge, B.-M., Gendreau-Berthiaume, B., Gerard, P.J., Gheler-Costa, C., Gilbert, B., Giordani, P., Giordano, S., Golodets, C., Gomes, L.G.L., Gould, R.K., Goulson, D., Gove, A.D., Granjon, L., Grass, I., Gray, C.L., Grogan, J., Gu, W., Guardiola, M., Gunawardene, N.R., Gutierrez, A.G., Gutiérrez-Lamus, D.L., Haarmeyer, D.H., Hanley, M.E., Hanson, T., Hashim, N.R., Hassan, S.N., Hatfield, R.G., Hawes, J.E., Hayward, M.W., Hébert, C., Helden, A.J., Henden, J.-A., Henschel, P., Hernández, L., Herrera, J.P., Herrmann, F., Herzog, F., Higuera-Diaz, D., Hilje, B., Hofer, H., Hoffmann, A., Horgan, F.G., Hornung, E., Horváth, R., Hylander, K., Isaacs-Cubides, P., Ishida, H., Ishitani, M., Jacobs, C.T., Jaramillo, V.J., Jauker, B., Hernández, F.J., Johnson, M.F., Jolli, V., Jonsell, M., Juliani, S.N., Jung, T.S., Kapoor, V., Kappes, H., Kati, V., Katovai, E., Kellner, K., Kessler, M., Kirby, K.R., Kittle, A.M., Knight, M.E., Knop, E., Köhler, F., Koivula, M., Kolb, A., Kone, M., Kőrösi, Á., Krauss, J., Kumar, A., Kumar, R., Kurz, D.J., Kutt, A.S., Lachat, T., Lantschner, V., Lara, F., Lasky, J.R., Latta, S.C., Laurance, W.F., Lavelle, P., Le Féon, V., LeBuhn, G., Légaré, J.-P., Lehouck, V., Lencinas, M.V., Lentini, P.E., Letcher, S.G., Li, Q., Litchwark, S.A., Littlewood, N.A., Liu, Y., Lo-Man-Hung, N., López-Quintero, C.A., Louhaichi, M., Lövei, G.L., Lucas-Borja, M.E., Luja, V.H., Luskin, M.S., MacSwiney G, M.C., Maeto, K., Magura, T., Mallari, N.A., Malone, L.A., Malonza, P.K., Malumbres-Olarte, J., Mandujano, S., Måren, I.E., Marin-Spiotta, E., Marsh, C.J., Marshall, E.J.P., Martínez, E., Martínez Pastur, G., Moreno Mateos, D., Mayfield, M.M., Mazimpaka, V., McCarthy, J.L., McCarthy, K.P., McFrederick, Q.S., McNamara, S., Medina, N.G., Medina, R., Mena, J.L., Mico, E., Mikusinski, G., Milder, J.C., Miller, J.R., Miranda-Esquivel, D.R., Moir, M.L., Morales, C.L., Muchane, M.N., Muchane, M., Mudri-Stojnic, S., Munira, A.N., Muoñz-Alonso, A., Munyekenye, B.F., Naidoo, R., Naithani, A., Nakagawa, M., Nakamura, A., Nakashima, Y., Naoe, S., Nates-Parra, G., Navarrete Gutierrez, D.A., Navarro-Iriarte, L., Ndang'ang'a, P.K., Neuschulz, E.L., Ngai, J.T., Nicolas, V., Nilsson, S.G., Noreika, N., Norfolk, O., Noriega, J.A., Norton, D.A., Nöske, N.M., Nowakowski, A.J., Numa, C., O'Dea, N., O'Farrell, P.J., Oduro, W., Oertli, S., Ofori-Boateng, C., Oke, C.O., Oostra, V., Osgathorpe, L.M., Otavo, S.E., Page, N.V., Paritsis, J., Parra-H, A., Parry, L., Pe'er, G., Pearman, P.B., Pelegrin, N., Pélissier, R., Peres, C.A., Peri, P.L., Persson, A.S., Petanidou, T., Peters, M.K., Pethiyagoda, R.S., Phalan, B., Philips, T.K., Pillsbury, F.C., Pincheira-Ulbrich, J., Pineda, E., Pino, J., Pizarro-Araya, J., Plumptre, A. J., Poggio, S.L., Politi, N., Pons, P., Poveda, K., Power, E.F., Presley, S.J., Proença, V., Quaranta, M., Quintero, C., Rader, R., Ramesh, B.R., Ramirez-Pinilla, M.P., Ranganathan, J., Rasmussen, C., Redpath-Downing, N.A., Reid, J.L., Reis, Y.T., Rey Benayas, J.M., Rey-Velasco, J.C., Reynolds, C., Ribeiro, D.B., Richards, M.H., Richardson, B.A., Richardson, M.J., Ríos, R.M., Robinson, R., Robles, C.A., Römbke, J., Romero-Duque, L.P., Rös, M., Rosselli, L., Rossiter, S.J., Roth, D.S., Roulston, T.H., Rousseau, L., Rubio, A.V., Ruel, J.-C., Sadler, J.P., Sáfián, S., Saldaña-Vázquez, R.A., Sam, K., Samnegård, U., Santana, J., Santos, X., Savage, J., Schellhorn, N.A., Schilthuizen, M., Schmiedel, U., Schmitt, C.B., Schon, N.L., Schüepp, C., Schumann, K., Schweiger, O., Scott, D.M., Scott, K.A., Sedlock, J.L., Seefeldt, S.S., Shahabuddin, G., Shannon, G., Sheil, D., Sheldon, F.H., Shochat, E., Siebert, S.J., Silva, F.A.B., Simonetti, J.A., Slade, E.M., Smith, J., Smith-Pardo, A.H., Sodhi, N.S., Somarriba, E.J., Sosa, R.A., Soto Quiroga, G., St-Laurent, M.-H., Starzomski, B.M., Stefanescu, C., Steffan-Dewenter, I., Stouffer, P.C., Stout, J.C., Strauch, A.M., Struebig, M.J., Su, Z., Suarez-Rubio, M., Sugiura, S., Summerville, K.S., Sung, Y.-H., Sutrisno, H., Svenning, J.-C., Teder, T., Threlfall, C.G., Tiitsaar, A., Todd, J.H., Tonietto, R.K., Torre, I., Tóthmérész, B., Tscharntke, T., Turner, E.C., Tylianakis, J.M., Uehara-Prado, M., Urbina-Cardona, N., Vallan, D., Vanbergen, A.J., Vasconcelos, H.L., Vassilev, K., Verboven, H.A.F., Verdasca, M.J., Verdú, J.R., Vergara, C.H., Vergara, P.M., Verhulst, J., Virgilio, M., Vu, L.V., Waite, E.M., Walker, T.R., Wang, H.-F., Wang, Y., Watling, J.I., Weller, B., Wells, K., Westphal, C., Wiafe, E.D., Williams, C.D., Willig, M.R., Woinarski, J.C.Z., Wolf, J.H.D., Wolters, V., Woodcock, B.A., Wu, J., Wunderle, J.M., Yamaura, Y., Yoshikura, S., Yu, D.W., Zaitsev, A.S., Zeidler, J., Zou, F., Collen, B., Ewers, R.M., Mace, G.M., Purves, D.W., Scharlemann, J.P.W., and Purvis, A.
- Abstract
The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
- Published
- 2016
10. Proximate Causes of Rensch’s Rule: Does Sexual Size Dimorphism in Arthropods Result from Sex Differences in Development Time?
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Blanckenhorn, W. U., Dixon, A. F. G., Fairbairn, D. J., Foellmer, M. W., Gibert, P., Linde, K., Rudolf Meier, Nylin, S., Pitnick, S., Schoff, C., Signorelli, M., Teder, T., Wiklund, C., Génétique et évolution des interactions hôtes-parasites, Département génétique, interactions et évolution des génomes [LBBE] (GINSENG), Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS), University of Zurich, and Blanckenhorn, Wolf U
- Subjects
10127 Institute of Evolutionary Biology and Environmental Studies ,[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT] ,1105 Ecology, Evolution, Behavior and Systematics ,[SDV]Life Sciences [q-bio] ,570 Life sciences ,biology ,590 Animals (Zoology) ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2007
11. Rensch’s Rule in insects: Patterns among and within species
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Blanckenhorn, Wolf U, Meier, R, Teder, T, University of Zurich, Fairbairn, D J, Blanckenhorn, Wolf U, and Szekely, T
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10127 Institute of Evolutionary Biology and Environmental Studies ,570 Life sciences ,biology ,590 Animals (Zoology) ,1100 General Agricultural and Biological Sciences - Published
- 2007
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12. Lipoxygenase-allene oxide synthase pathway in octocoral thermal stress response
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Lõhelaid, H., primary, Teder, T., additional, and Samel, N., additional
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- 2014
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13. Distinguishing between anticipatory and responsive plasticity in a seasonally polyphenic butterfly
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Esperk, T, Stefanescu, C, Teder, T, Wiklund, C, Kaasik, A, Tammaru, T, Esperk, T, Stefanescu, C, Teder, T, Wiklund, C, Kaasik, A, and Tammaru, T
- Abstract
Seasonal generations of short-lived organisms often differ in their morphological, behavioural and life history traits, including body size. These differences may be either due to immediate effects of seasonally variable environment on organisms (responsive plasticity) or rely on presumably adaptive responses of organisms to cues signalizing forthcoming seasonal changes (anticipatory plasticity). When directly developing individuals of insects are larger than their overwintering conspecifics, the between-generation differences are typically ascribed to responsive plasticity in larval growth. We tested this hypothesis using the papilionid butterly Iphiclides podalirius as a model species. In laboratory experiments, we demonstrated that seasonal differences in food quality could not explain the observed size difference. Similarly, the size differences are not likely to be explained by the immediate effects of ambient temperature and photoperiod on larval growth. The qualitative pattern of natural size differences between the directly developing and diapausing butterflies could be reproduced in the laboratory as a response to photoperiod, indicating anticipatory character of the response. Directly developing and diapausing individuals followed an identical growth trajectory until the end of the last larval instar, with size differences appearing just a few days before pupation. Taken together, various lines of evidence suggest that between-generation size differences in I. podalirius are not caused by immediate effects of environmental factors on larval growth. Instead, these differences rather represent anticipatory plasticity and are thus likely to have an adaptive explanation. It remains currently unclear, whether the seasonal differences in adult size per se are adaptive, or if they constitute co-product of processes related to the diapause. Our study shows that it may be feasible to distinguish between different types of plasticity on the basis of empirical data e
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- 2013
14. Habitat fragmentation causes immediate and time-delayed biodiversity loss at different trophic levels
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Krauss, J, Bommarco, R, Guardiola, M, Heikkinen, R, Helm, A, Kuussaari, M, Lindborg, Regina, Öckinger, E, Pärtel, M, Pino, J, Pöyry, J, Raatikainen, K M, Sang, A, Stefanescu, C, Teder, T, Zobel, M, Steffan-Dewenter, I, Krauss, J, Bommarco, R, Guardiola, M, Heikkinen, R, Helm, A, Kuussaari, M, Lindborg, Regina, Öckinger, E, Pärtel, M, Pino, J, Pöyry, J, Raatikainen, K M, Sang, A, Stefanescu, C, Teder, T, Zobel, M, and Steffan-Dewenter, I
- Abstract
Intensification or abandonment of agricultural land use has led to a severe decline of semi-natural habitats across Europe. This can cause immediate loss of species but also time-delayed extinctions, known as the extinction debt. In a pan-European study of 147 fragmented grassland remnants, we found differences in the extinction debt of species from different trophic levels. Present-day species richness of long-lived vascular plant specialists was better explained by past than current landscape patterns, indicating an extinction debt. In contrast, short-lived butterfly specialists showed no evidence for an extinction debt at a time scale of c. 40 years. Our results indicate that management strategies maintaining the status quo of fragmented habitats are insufficient, as time- delayed extinctions and associated co-extinctions will lead to further biodiversity loss in the future.
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- 2010
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15. Effects of patch size and density on flower visitation and seed set of wild plants: a pan-European approach
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Dauber, J., Biesmeijer, J.C., Gabriel, D., Kunin, W.E., Lamborn, E., Meyer, B., Nielsen, A., Potts, S.G., Sõber, V., Settele, Josef, Steffan-Dewenter, I., Stout, J.C., Teder, T., Tscheulin, T., Vivarelli, D., Petanidou, T., Dauber, J., Biesmeijer, J.C., Gabriel, D., Kunin, W.E., Lamborn, E., Meyer, B., Nielsen, A., Potts, S.G., Sõber, V., Settele, Josef, Steffan-Dewenter, I., Stout, J.C., Teder, T., Tscheulin, T., Vivarelli, D., and Petanidou, T.
- Abstract
1. Habitat fragmentation can affect pollinator and plant population structure in terms of species composition, abundance, area covered and density of flowering plants. This, in turn, may affect pollinator visitation frequency, pollen deposition, seed set and plant fitness.2. A reduction in the quantity of flower visits can be coupled with a reduction in the quality of pollination service and hence the plants' overall reproductive success and long-term survival. Understanding the relationship between plant population size and/or isolation and pollination limitation is of fundamental importance for plant conservation.3. We examined flower visitation and seed set of 10 different plant species from five European countries to investigate the general effects of plant populations size and density, both within (patch level) and between populations (population level), on seed set and pollination limitation.4. We found evidence that the effects of area and density of flowering plant assemblages were generally more pronounced at the patch level than at the population level. We also found that patch and population level together influenced flower visitation and seed set, and the latter increased with increasing patch area and density, but this effect was only apparent in small populations.5. Synthesis. By using an extensive pan-European data set on flower visitation and seed set we have identified a general pattern in the interplay between the attractiveness of flowering plant patches for pollinators and density dependence of flower visitation, and also a strong plant species-specific response to habitat fragmentation effects. This can guide efforts to conserve plant-pollinator interactions, ecosystem functioning and plant fitness in fragmented habitats.
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- 2010
16. Rensch’s Rule in insects: Patterns among and within species
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Fairbairn, D J, Blanckenhorn, Wolf U; https://orcid.org/0000-0002-0713-3944, Szekely, T, Fairbairn, D J ( D J ), Blanckenhorn, W U ( Wolf U ), Szekely, T ( T ), Meier, R, Teder, T, Fairbairn, D J, Blanckenhorn, Wolf U; https://orcid.org/0000-0002-0713-3944, Szekely, T, Fairbairn, D J ( D J ), Blanckenhorn, W U ( Wolf U ), Szekely, T ( T ), Meier, R, and Teder, T
- Published
- 2007
17. Patterns of host use in solitary parasitoids (Hymenoptera, Ichneumonidae): field evidence from a homogeneous habitat
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Tammaru, T., Pedmanson, R., and Teder, T.
- Subjects
INSECTS ,MOTHS ,ENTOMOLOGY - Abstract
We detected it significant inter- and intraspecific host preference on the level of individual host use in a system, in which three moth species (Lepidoptera: Noctuidae), feeding on a cattail Typha latifolia are parasitized by three solitary parasitoid species (Hymenoptera: Ichneumonidae). The biology of the host species is similar but they exhibit remarkable inter- and intraspecific variance in body size. Allthe parasitoid species preferred the largest host species in this system whereas other host species were used only occasionally. We foundthat parasitoids which emerged from females of the preferred host species were larger than those which developed in males of the same species. Accordingly, two of the parasitoid species had a significant within-host-species preference: females of the largest moth species were used more often than males. No dependence of the preference patternon host density was found. This pattern of host use is discussed in the light of the switching theory and the optimal host selection theory. Our results indicate that non-random host use by parasitoids may have significant effects on host populations and communities, and forms a potential selective factor against large boly size in herbivorous insects. Unlike the majority of ichneumonid wasps, these three parasitoid species have no remarkable female-biased sexual size dimorphism. In accordance with the predictions of Charnov's sex allocation theory for this case, we did not observe any significant host quality dependent biases in sex allocation: there was no association between host sex and parasitoid sex. neither did parasitoid sex ratio differ between years with different host quality. [ABSTRACT FROM AUTHOR]
- Published
- 1999
18. Proximate Causes of Rensch’s Rule: Does Sexual Size Dimorphism in Arthropods Result from Sex Differences in Development Time?
- Author
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Blanckenhorn, Wolf U, Dixon, A F G, Fairbairn, D J, Foellmer, M W, Gibert, P, van der Linde, K, Meier, R, Nylin, S, Pitnick, S, Schoff, C, Signorelli, M, Teder, T, and Wiklund, C
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10. No inequality
19. Biosynthesis of resolvin D1, resolvin D2, and RCTR1 from 7,8(S,S)-epoxytetraene in human neutrophils and macrophages.
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Nshimiyimana R, Simard M, Teder T, Rodriguez AR, Spur BW, Haeggström JZ, and Serhan CN
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- Humans, Receptors, G-Protein-Coupled, Docosahexaenoic Acids metabolism, Docosahexaenoic Acids biosynthesis, Neutrophils metabolism, Macrophages metabolism
- Abstract
While the acute inflammatory response to harmful stimuli is protective, unrestrained neutrophil swarming drives collateral tissue damage and inflammation. Biosynthesized from omega-3 essential polyunsaturated fatty acids, resolvins are a family of signaling molecules produced by immune cells within the resolution phase to orchestrate return to homeostasis. Understanding the mechanisms that govern biosynthesis of these potent molecules gives insight into stimulating endogenous resolution and offers fresh opportunities for preventing and treating excessive inflammation. In this report, using materials prepared by total synthesis and liquid chromatography and tandem mass spectrometry-based matching studies, we established the role of 7,8(S,S)-epoxytetraene intermediate in the biosynthesis of resolvin D1, resolvin D2, and the resolvin conjugate in tissue regeneration (RCTR1) by human phagocytes. We demonstrated that this 7,8(S,S)-epoxy-containing intermediate is directly converted to resolvin D2 by human M2-like macrophages and to resolvin D1 and RCTR1 by human macrophages, neutrophils, and peripheral blood mononuclear cells. In addition, both human recombinant soluble epoxide hydrolase (sEH) and the glutathione S-transferase leukotriene C
4 synthase (LTC4 S) each catalyze conversion of this epoxide to resolvin D1 and RCTR1, respectively. MS3 ion-trap scans and isotope incorporation of18 O from H2 18 O with sEH indicated that the oxygen atom at C-8 in resolvin D1 is derived from water. Results from molecular docking simulations with biosynthetic precursor 17S-hydroperoxy-4,7,10,13,19- cis -15- trans -docosahexaenoic acid and the epoxy intermediate were consistent with 5-lipoxygenase production of resolvin D1. Together, these results give direct evidence for the role of resolvin 7,8(S,S)-epoxytetraene intermediate in the endogenous formation of resolution-phase mediators resolvin D1, resolvin D2, and RCTR1 by human phagocytes., Competing Interests: Competing interests statement:C.N.S. is inventor on patents for resolvin D1, D2, and RCTRs that are assigned and managed by BWH. The other authors declare no competing interest.- Published
- 2024
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20. A comparative study of body size evolution in moths: evidence of correlated evolution with feeding and phenology-related traits.
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Foerster SÍA, Clarke JT, Õunap E, Teder T, and Tammaru T
- Subjects
- Animals, Feeding Behavior, Life History Traits, Moths physiology, Moths growth & development, Moths genetics, Moths anatomy & histology, Body Size, Biological Evolution, Phylogeny
- Abstract
Interspecific variation in body size is one of the most popular topics in comparative studies. Despite recent advances, little is known about the patterns and processes behind the evolution of body size in insects. Here, we used a robust data set comprising all geometrid moth species occurring in Northern Europe to examine the evolutionary associations involving body size and several life-history traits under an explicitly phylogenetic framework. We provided new insights into the interactive effects of life-history traits on body size and evidence of correlated evolution. We further established the sequence of trait evolution linking body size with the life-history traits correlated with it. We found that most (but not all) of the studied life-history traits, to some extent, influenced interspecific variation in body size, but interactive effects were uncommon. Both bi- and multivariate phylogenetic analyses indicated that larger species tend to be nocturnal flyers, overwinter in the larval stage, feed on the foliage of trees rather than herbs, and have a generalist feeding behaviour. We found evidence of correlated evolution involving body size with overwintering stage, host-plant growth form, and dietary specialization. The examination of evolutionary transitions within the correlated evolution models signalled that overwintering as larvae commonly preceded the evolution of large sizes, as did feeding on tree foliage and the generalist feeding behaviour. By showing that both body size and all life-history traits correlated with it evolve at very slow rates, we caution against uncritical attempts to propose causal explanations for respective associations based on contemporary ecological settings., (© The Author(s) 2024. Published by Oxford University Press on behalf of the European Society of Evolutionary Biology. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
- Published
- 2024
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21. Beneath the blades: Marine wind farms support parts of local biodiversity - a systematic review.
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Knorrn AH, Teder T, Kaasik A, and Kreitsberg R
- Subjects
- Animals, Aquatic Organisms, Environmental Monitoring, Renewable Energy, Ecosystem, Biodiversity, Wind
- Abstract
Offshore wind energy developments in European waters are rapidly expanding to meet the increasing global demand for renewable energy. These developments provide new substrates for species colonisation, but also introduce changes in electromagnetic fields, noise levels, and hydrological conditions. Understanding how these man-made structures affect marine biodiversity across various species groups is crucial, yet our knowledge in this field remains incomplete. In this synthesis paper, based on 14 case studies conducted in northeastern Atlantic (North, Irish and Baltic seas), we aggregated species-level data on abundance, biomass, and other quantity proxies spanning the entire food chain from invertebrates to mammals, and compared these variables between wind farms and nearby control sites. Overall, our analysis revealed that in wind farm areas, species tend to occur at higher quantities than in control areas. Additionally, we noticed a slight trend where the positive effect of wind farms was more pronounced in newly established ones, gradually diminishing as wind farms aged. None of the tested covariates (depth, distance from coastline, years in commission) nor species' characteristics (habitat and spawning types, trophic level) showed statistical significance. When examining species groups individually, there was a tendency for wind farm areas to harbour higher quantities of polychaetes, echinoderms and demersal fishes. These findings suggest that wind farms contribute to the so-called reef-effect, providing shelter and food supplies to their inhabitants and acting as no-take-zones. Our results support the idea that wind farms could serve as zones of increased local biodiversity, potentially facilitating spillover effects to nearby areas for certain species groups. Further studies are necessary to gain a more comprehensive understanding of the adverse effects of wind farms on associated biodiversity, while also exploring avenues to amplify their positive impacts., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2024
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22. Cross-talk between bioactive lipid mediators and the unfolded protein response in ischemic stroke.
- Author
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Teder T, Haeggström JZ, Airavaara M, and Lõhelaid H
- Subjects
- Humans, Unfolded Protein Response, Endoplasmic Reticulum Stress, Inflammation, Lipids, Ischemic Stroke
- Abstract
Ischemic cerebral stroke is a severe medical condition that affects about 15 million people every year and is the second leading cause of death and disability globally. Ischemic stroke results in neuronal cell death and neurological impairment. Current therapies may not adequately address the deleterious metabolic changes and may increase neurological damage. Oxygen and nutrient depletion along with the tissue damage result in endoplasmic reticulum (ER) stress, including the Unfolded Protein Response (UPR), and neuroinflammation in the affected area and cause cell death in the lesion core. The spatio-temporal production of lipid mediators, either pro-inflammatory or pro-resolving, decides the course and outcome of stroke. The modulation of the UPR as well as the resolution of inflammation promotes post-stroke cellular viability and neuroprotection. However, studies about the interplay between the UPR and bioactive lipid mediators remain elusive and this review gives insights about the crosstalk between lipid mediators and the UPR in ischemic stroke. Overall, the treatment of ischemic stroke is often inadequate due to lack of effective drugs, thus, this review will provide novel therapeutical strategies that could promote the functional recovery from ischemic stroke., Competing Interests: Conflict of Interest Authors declare the absence of any conflict of interest., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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23. Early-life food stress hits females harder than males in insects: A meta-analysis of sex differences in environmental sensitivity.
- Author
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Teder T and Kaasik A
- Subjects
- Humans, Animals, Male, Female, Phylogeny, Reproduction, Larva, Sex Ratio, Sex Characteristics, Insecta
- Abstract
Fitness consequences of early-life environmental conditions are often sex-specific, but corresponding evidence for invertebrates remains inconclusive. Here, we use meta-analysis to evaluate sex-specific sensitivity to larval nutritional conditions in insects. Using literature-derived data for 85 species with broad phylogenetic and ecological coverage, we show that females are generally more sensitive to food stress than males. Stressful nutritional conditions during larval development typically lead to female-biased mortality and thus increasingly male-biased sex ratios of emerging adults. We further demonstrate that the general trend of higher sensitivity to food stress in females can primarily be attributed to their typically larger body size in insects and hence higher energy needs during development. By contrast, there is no consistent evidence of sex-biased sensitivity in sexually size-monomorphic species. Drawing conclusions regarding sex-biased sensitivity in species with male-biased size dimorphism remains to wait for the accumulation of relevant data. Our results suggest that environmental conditions leading to elevated juvenile mortality may potentially affect the performance of insect populations further by reducing the proportion of females among individuals reaching reproductive age. Accounting for sex-biased mortality is therefore essential to understanding the dynamics and demography of insect populations, not least importantly in the context of ongoing insect declines., (© 2023 The Authors. Ecology Letters published by John Wiley & Sons Ltd.)
- Published
- 2023
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24. Modulation of the 5-Lipoxygenase Pathway by Chalcogen-Containing Inhibitors of Leukotriene A 4 Hydrolase.
- Author
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Teder T, König S, Singh R, Samuelsson B, Werz O, Garscha U, and Haeggström JZ
- Subjects
- Leukotriene A4, Arachidonate 5-Lipoxygenase, Aminopeptidases metabolism, Epoxide Hydrolases metabolism, Chalcogens
- Abstract
The 5-lipoxygenase (5-LOX) pathway gives rise to bioactive inflammatory lipid mediators, such as leukotrienes (LTs). 5-LOX carries out the oxygenation of arachidonic acid to the 5-hydroperoxy derivative and then to the leukotriene A
4 epoxide which is converted to a chemotactic leukotriene B4 (LTB4 ) by leukotriene A4 hydrolase (LTA4 H). In addition, LTA4 H possesses aminopeptidase activity to cleave the N-terminal proline of a pro-inflammatory tripeptide, prolyl-glycyl-proline (PGP). Based on the structural characteristics of LTA4 H, it is possible to selectively inhibit the epoxide hydrolase activity while sparing the inactivating, peptidolytic, cleavage of PGP. In the current study, chalcogen-containing compounds, 4-(4-benzylphenyl) thiazol-2-amine (ARM1) and its selenazole (TTSe) and oxazole (TTO) derivatives were characterized regarding their inhibitory and binding properties. All three compounds selectively inhibit the epoxide hydrolase activity of LTA4 H at low micromolar concentrations, while sparing the aminopeptidase activity. These inhibitors also block the 5-LOX activity in leukocytes and have distinct inhibition constants with recombinant 5-LOX. Furthermore, high-resolution structures of LTA4 H with inhibitors were determined and potential binding sites to 5-LOX were proposed. In conclusion, we present chalcogen-containing inhibitors which differentially target essential steps in the biosynthetic route for LTB4 and can potentially be used as modulators of inflammatory response by the 5-LOX pathway.- Published
- 2023
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25. Limited sex differences in plastic responses suggest evolutionary conservatism of thermal reaction norms: A meta-analysis in insects.
- Author
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Teder T, Taits K, Kaasik A, and Tammaru T
- Abstract
Temperature has a profound effect on the growth and development of ectothermic animals. However, the extent to which ecologically driven selection pressures can adjust thermal plastic responses in growth schedules is not well understood. Comparing temperature-induced plastic responses between sexes provides a promising but underexploited approach to evaluating the evolvability of thermal reaction norms: males and females share largely the same genes and immature environments but typically experience different ecological selection pressures. We proceed from the idea that substantial sex differences in plastic responses could be interpreted as resulting from sex-specific life-history optimization, whereas similarity among the sexes should rather be seen as evidence of an essential role of physiological constraints. In this study, we performed a meta-analysis of sex-specific thermal responses in insect development times, using data on 161 species with comprehensive phylogenetic and ecological coverage. As a reference for judging the magnitude of sex specificity in thermal plasticity, we compared the magnitude of sex differences in plastic responses to temperature with those in response to diet. We show that sex-specific responses of development times to temperature variation are broadly similar. We also found no strong evidence for sex specificity in thermal responses to depend on the magnitude or direction of sex differences in development time. Sex differences in temperature-induced plastic responses were systematically less pronounced than sex differences in responses induced by variations in larval diet. Our results point to the existence of substantial constraints on the evolvability of thermal reaction norms in insects as the most likely explanation. If confirmed, the low evolvability of thermal response is an essential aspect to consider in predicting evolutionary responses to climate warming., Competing Interests: The authors declare no conflict of interest., (© 2022 The Authors. Evolution Letters published by Wiley Periodicals LLC on behalf of Society for the Study of Evolution (SSE) and European Society for Evolutionary Biology (ESEB).)
- Published
- 2022
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26. Climate variability and aridity modulate the role of leaf shelters for arthropods: A global experiment.
- Author
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Romero GQ, Gonçalves-Souza T, Roslin T, Marquis RJ, Marino NAC, Novotny V, Cornelissen T, Orivel J, Sui S, Aires G, Antoniazzi R, Dáttilo W, Breviglieri CPB, Busse A, Gibb H, Izzo TJ, Kadlec T, Kemp V, Kersch-Becker M, Knapp M, Kratina P, Luke R, Majnarić S, Maritz R, Mateus Martins P, Mendesil E, Michalko J, Mrazova A, Novais S, Pereira CC, Perić MS, Petermann JS, Ribeiro SP, Sam K, Trzcinski MK, Vieira C, Westwood N, Bernaschini ML, Carvajal V, González E, Jausoro M, Kaensin S, Ospina F, Cristóbal-Pérez EJ, Quesada M, Rogy P, Srivastava DS, Szpryngiel S, Tack AJM, Teder T, Videla M, Viljur ML, and Koricheva J
- Subjects
- Animals, Biodiversity, Climate Change, Ecosystem, Plant Leaves, Arthropods
- Abstract
Current climate change is disrupting biotic interactions and eroding biodiversity worldwide. However, species sensitive to aridity, high temperatures, and climate variability might find shelter in microclimatic refuges, such as leaf rolls built by arthropods. To explore how the importance of leaf shelters for terrestrial arthropods changes with latitude, elevation, and climate, we conducted a distributed experiment comparing arthropods in leaf rolls versus control leaves across 52 sites along an 11,790 km latitudinal gradient. We then probed the impact of short- versus long-term climatic impacts on roll use, by comparing the relative impact of conditions during the experiment versus average, baseline conditions at the site. Leaf shelters supported larger organisms and higher arthropod biomass and species diversity than non-rolled control leaves. However, the magnitude of the leaf rolls' effect differed between long- and short-term climate conditions, metrics (species richness, biomass, and body size), and trophic groups (predators vs. herbivores). The effect of leaf rolls on predator richness was influenced only by baseline climate, increasing in magnitude in regions experiencing increased long-term aridity, regardless of latitude, elevation, and weather during the experiment. This suggests that shelter use by predators may be innate, and thus, driven by natural selection. In contrast, the effect of leaf rolls on predator biomass and predator body size decreased with increasing temperature, and increased with increasing precipitation, respectively, during the experiment. The magnitude of shelter usage by herbivores increased with the abundance of predators and decreased with increasing temperature during the experiment. Taken together, these results highlight that leaf roll use may have both proximal and ultimate causes. Projected increases in climate variability and aridity are, therefore, likely to increase the importance of biotic refugia in mitigating the effects of climate change on species persistence., (© 2022 John Wiley & Sons Ltd.)
- Published
- 2022
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27. Subtle structures with not-so-subtle functions: A data set of arthropod constructs and their host plants.
- Author
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Pereira CC, Novais S, Barbosa M, Negreiros D, Gonçalves-Souza T, Roslin T, Marquis R, Marino N, Novotny V, Orivel J, Sui S, Aires G, Antoniazzi R, Dáttilo W, Breviglieri C, Busse A, Gibb H, Izzo T, Kadlec T, Kemp V, Kersch-Becker M, Knapp M, Kratina P, Luke R, Majnarić S, Maritz R, Martins PM, Mendesil E, Michalko J, Mrazova A, Perić MS, Petermann J, Ribeiro S, Sam K, Trzcinski MK, Vieira C, Westwood N, Bernaschini M, Carvajal V, González E, Jausoro M, Kaensin S, Ospina F, Pérez JC, Quesada M, Rogy P, Srivastava DS, Szpryngiel S, Tack AJM, Teder T, Videla M, Viljur ML, Koricheva J, Fernandes GW, Romero GQ, and Cornelissen T
- Subjects
- Animals, Biodiversity, Ecosystem, Insecta, Plant Leaves, Plants, Arthropods
- Abstract
The construction of shelters on plants by arthropods might influence other organisms via changes in colonization, community richness, species composition, and functionality. Arthropods, including beetles, caterpillars, sawflies, spiders, and wasps often interact with host plants via the construction of shelters, building a variety of structures such as leaf ties, tents, rolls, and bags; leaf and stem galls, and hollowed out stems. Such constructs might have both an adaptive value in terms of protection (i.e., serve as shelters) but may also exert a strong influence on terrestrial community diversity in the engineered and neighboring hosts via colonization by secondary occupants. Although different traits of the host plant (e.g., physical, chemical, and architectural features) may affect the potential for ecosystem engineering by insects, such effects have been, to a certain degree, overlooked. Further analyses of how plant traits affect the occurrence of shelters may therefore enrich our understanding of the organizing principles of plant-based communities. This data set includes more than 1000 unique records of ecosystem engineering by arthropods, in the form of structures built on plants. All records have been published in the literature, and span both natural structures (91% of the records) and structures artificially created by researchers (9% of the records). The data were gathered between 1932 and 2021, across more than 50 countries and several ecosystems, ranging from polar to tropical zones. In addition to data on host plants and engineers, we aggregated data on the type of constructs and the identity of inquilines using these structures. This data set highlights the importance of these subtle structures for the organization of terrestrial arthropod communities, enabling hypotheses testing in ecological studies addressing ecosystem engineering and facilitation mediated by constructs. There are no copyright restrictions and please cite this paper when using the data in publications., (© 2022 The Ecological Society of America.)
- Published
- 2022
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28. The IRE1α Inhibitor KIRA6 Blocks Leukotriene Biosynthesis in Human Phagocytes.
- Author
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Tang X, Teder T, Samuelsson B, and Haeggström JZ
- Abstract
The ER stress and Unfolded Protein Response (UPR) component inositol-requiring enzyme 1α (IRE1α) has been linked to inflammation and lipid mediator production. Here we report that the potent IRE1α inhibitor, KIRA6, blocks leukotriene biosynthesis in human phagocytes activated with lipopolysaccharide (LPS) plus N-formyl-methionyl-leucyl-phenylalanine (fMLP) or thapsigargin (Tg). The inhibition affects both leukotriene B
4 (LTB4 ) and cysteinyl leukotriene (cys-LTs) production at submicromolar concentration. Macrophages made deficient of IRE1α were still sensitive to KIRA6 thus demonstrating that the compound's effect on leukotriene production is IRE1α-independent. KIRA6 did not exhibit any direct inhibitory effect on key enzymes in the leukotriene pathway, as assessed by phospholipase A2 (PLA2 ), 5-lipoxygenase (5-LOX), LTA4 hydrolase (LTA4H), and LTC4 synthase (LTC4S) enzyme activity measurements in cell lysates. However, we find that KIRA6 dose-dependently blocks phosphorylation of p38 and ERK, mitogen-activated protein kinases (MAPKs) that have established roles in activating cytosolic PLA2 α (cPLA2 α) and 5-LOX. The reduction of p38 and ERK phosphorylation is associated with a decrease in cPLA2 α phosphorylation and attenuated leukotriene production. Furthermore, KIRA6 inhibits p38 activity, and molecular modelling indicates that it can directly interact with the ATP-binding pocket of p38. This potent and unexpected, non-canonical effect of KIRA6 on p38 and ERK MAPKs and leukotriene biosynthesis may account for some of the immune-modulating properties of this widely used IRE1α inhibitor., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Tang, Teder, Samuelsson and Haeggström.)- Published
- 2022
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29. Why do males emerge before females? Sexual size dimorphism drives sexual bimaturism in insects.
- Author
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Teder T, Kaasik A, Taits K, and Tammaru T
- Subjects
- Animals, Biological Evolution, Body Size, Female, Fertility, Male, Sexual Behavior, Animal physiology, Insecta, Sex Characteristics
- Abstract
Conspecific females and males often follow different development trajectories which leads to sex differences in age at maturity (sexual bimaturism, SBM). Whether SBM is typically selected for per se (direct selection hypothesis) or merely represents a side-effect of other sex-related adaptations (indirect selection hypothesis) is, however, still an open question. Substantial interspecific variation in the direction and degree of SBM, both in invertebrates and vertebrates, calls for multi-species studies to understand the relative importance of its evolutionary drivers. Here we use two complementary approaches to evaluate the evolutionary basis of SBM in insects. For this purpose, we assembled an extensive literature-derived data set of sex-specific development times and body sizes for a taxonomically and ecologically wide range of species. We use these data in a meta-analytic framework to evaluate support for the direct and indirect selection hypotheses. Our results confirm that protandry - males emerging as adults before females - is the prevailing form of SBM in insects. Nevertheless, protandry is not as ubiquitous as often presumed: females emerged before males (= protogyny) in about 36% of the 192 species for which we had data. Moreover, in a considerable proportion of species, the sex difference in the timing of adult emergence was negligible. In search for the evolutionary basis of SBM, we found stronger support for the hypothesis that explains SBM by indirect selection. First, across species, the direction and degree of SBM appeared to be positively associated with the direction and degree of sexual size dimorphism (SSD). This is consistent with the view that SBM is a correlative by-product of evolution towards sexually dimorphic body sizes. Second, within protandrous species, the degree of protandry typically increased with plastic increase in development time, with females prolonging their development more than males in unfavourable conditions. This pattern is in conflict with the direct selection hypothesis, which predicts the degree of protandry to be insensitive to the quality of the juvenile environment. These converging lines of evidence support the idea that, in insects, SBM is generally a by-product of SSD rather than a result of selection on the two sexes to mature at different times. It appears plausible that selective pressures on maturation time per se generally cannot compete with viability- and fecundity-mediated selection on insect body sizes. Nevertheless, exceptions certainly exist: there are undeniable cases of SBM where this trait has evolved in response to direct selection. In such cases, either the advantage of sex difference in maturation time must have been particularly large, or fitness effects of body size have been unusually weak., (© 2021 Cambridge Philosophical Society.)
- Published
- 2021
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30. Distinct characteristics of the substrate binding between highly homologous catalase-related allene oxide synthase and hydroperoxide lyase.
- Author
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Teder T, Samel N, and Lõhelaid H
- Subjects
- Animals, Anthozoa enzymology, Computer Simulation, Fatty Acids, Unsaturated chemistry, Fatty Acids, Unsaturated metabolism, Hydrophobic and Hydrophilic Interactions, Molecular Docking Simulation, Protein Binding, Protein Conformation, Static Electricity, Substrate Specificity, Aldehyde-Lyases chemistry, Aldehyde-Lyases metabolism, Catalase chemistry, Catalase metabolism, Cytochrome P-450 Enzyme System chemistry, Cytochrome P-450 Enzyme System metabolism, Intramolecular Oxidoreductases chemistry, Intramolecular Oxidoreductases metabolism, Sequence Homology, Amino Acid
- Abstract
A catalase-related allene oxide synthase (cAOS) or a hydroperoxide lyase (cHPL) fused together with an 8R-lipoxygenase is involved in the stress signaling of corals via an arachidonic acid pathway. cAOS gives rise to α-ketol and cyclopentenone, while cHPL catalyzes the cleavage of 8R-hydroperoxyeicosatetraenoic acid (8R-HpETE) to C8-oxo acid and C12 aldehyde. In silico analysis of the substrate entry sites of highly identical coral cAOS and cHPL indicated that two positively charged residues of cAOS, K60 and K107, and the corresponding residues of cHPL, E60 and K107, may be involved in the anchoring of the carboxy group of polyunsaturated fatty acid (PUFA) hydroperoxides. A mutational analysis of cAOS and cHPL revealed that K60 or E60 and K107 were not necessary in the tethering of 8R-HpETE, however, the E60 of cHPL was essential in the productive binding of PUFA hydroperoxides. The substrate preferences of cAOS and cHPL were determined with hydroperoxy derivatives of C18, C20, C22 PUFAs, anandamide (AEA), 1-arachidonoyl glycerol (1-AG) and selected methylated substrates. Although cAOS and cHPL were able to metabolize different free PUFA substrates and arachidonoyl derivatives, only cHPL catalyzed the reaction with methylated PUFA hydroperoxides. The differences in the substrate binding and preferences between cAOS and cHPL can be explained by the distinct properties of their substrate entry sites. The current study demonstrated that homologous PUFA metabolizing enzymes may contribute to the versatile usage of the substrate pool., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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31. Ontogeny of sexual size dimorphism revisited: Females grow for a longer time and also faster.
- Author
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Sõber V, Sandre SL, Esperk T, Teder T, and Tammaru T
- Subjects
- Animals, Female, Male, Time Factors, Weight Loss, Body Size, Larva growth & development, Moths growth & development, Sex Characteristics
- Abstract
Sex-specific mechanisms of the determination of insect body sizes are insufficiently understood. Here we use the common heath moth, Ematurga atomaria (Lepidoptera: Geometridae) to examine how larval growth trajectories differ between males and females. We monitored the development of 1379 larvae in controlled laboratory conditions. Sexually dimorphic development times during the first four instars were associated with sexual size dimorphism (SSD) in the beginning of the fifth (last) instar, when females were on average 15% heavier than males. Similarly, the duration of the last instar was about 13% longer in females. Further, we specifically focussed on the estimates of differential (instantaneous) growth rates of the larvae based on 24h mass increments of the 2nd, 3rd, 4th and 5th day in the beginning of the last instar. We calculated 'allometric' differential growth rates as the per-day increase in cube-root-transformed mass of the larvae. We found that allometric growth rates were slightly but significantly larger in females than in males. As this measure of growth rate (in contrast to the relative growth rate, based on the ratio of masses recorded at consecutive measurements) did not depend on body size, it allows an unambiguous separation of the effects of sex and size. We conclude that in accordance with an emerging general pattern, larger female body size in E. atomaria is achieved primarily by means of a longer growth period. Furthermore, our study shows that the differential growth rate can also be sexually dimorphic and contribute to SSD. This contribution, however, is lower than that of the development time by an order of magnitude. In addition to development periods and growth rates, other parameters of the non-linear growth curves of insect larvae also need to be considered in the context of SSD determination. In particular, weight loss prior to pupation was shown to be considerably larger in females than in males., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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32. Paenibacillus polymyxa biofilm polysaccharides antagonise Fusarium graminearum.
- Author
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Timmusk S, Copolovici D, Copolovici L, Teder T, Nevo E, and Behers L
- Subjects
- Triticum microbiology, Biofilms, Fusarium drug effects, Paenibacillus polymyxa physiology, Polysaccharides, Bacterial pharmacology
- Abstract
Fusarium Head Blight (FHB) caused by Fusarium graminearum pathogens constitutes a major threat to agricultural production because it frequently reduces the yield and quality of the crop. The disease severity is predicted to increase in various regions owing to climate change. Integrated management where biocontrol plays an important role has been suggested in order to fight FHB. P. polymyxa A26 is known to be an effective antagonist against F. graminearum. Deeper understanding of the mode of action of P. polymyxa A26 is needed to develop strategies for its application under natural settings in order to effectively overcome the pathogenic effects. This study aims to re-evaluate a former study and reveal whether compounds other than non-ribosomal antibiotic lipopeptides could be responsible for the antagonistic effect, despite what is often reported. Wheat seedlings were grown to maturity and the spikes infected with the pathogen under greenhouse conditions. The development of FHB infection, quantified via the disease incidence severity and 100-kernel weight, was strongly correlated (r > 0.78, p < 0.01) with the content of the polysaccharide component D-glucuronic acid in the biofilm. Furthermore, while increased inoculum density from 10
6 to 108 cells/ml did not affect wild type performance, a significant increase was observed with the P. polymyxa mutant deficient in nonribosomal lipopeptide synthesis. Our results show that P. polymyxa A26 biofilm extracellular polysaccharides are capable of antagonizing F. graminearum and that the uronate content of the polysaccharides is of critical importance in the antagonism.- Published
- 2019
- Full Text
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33. Sublethal effects enhance detrimental impact of insecticides on non-target organisms: A quantitative synthesis in parasitoids.
- Author
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Teder T and Knapp M
- Subjects
- Animals, Crops, Agricultural drug effects, Crops, Agricultural parasitology, Female, Hymenoptera drug effects, Lethal Dose 50, Male, Plants, Genetically Modified drug effects, Plants, Genetically Modified parasitology, Sex Factors, Crops, Agricultural growth & development, Host-Parasite Interactions drug effects, Hymenoptera growth & development, Insecticides toxicity, Plants, Genetically Modified growth & development, Reproduction
- Abstract
Parasitoids acting as biocontrol agents provide farmers with valuable ecosystem services, but are sensitive to insecticides applied against pests. Besides lethal effects of insecticides, sublethal effects observed among survivors may further influence parasitoids' performance. However, information on sublethal effects is scattered across case studies, without a quantitative synthesis and evaluation of generality of respective data. We conducted an analysis of 85 primary empirical datasets to quantify sublethal effects of insecticide application on two key parameters of parasitoid fitness, offspring production and proportion of females among offspring (i.e. sex ratio). To create a direct link to existing agricultural practices, we primarily focused on studies in which parasitoids were exposed to field-recommended concentrations of insecticides. Insecticide-exposed females produced substantially fewer and more male-biased offspring, accounting for an average of about 28% cumulative loss in parasitoid reproductive capacity per generation. The magnitude of sublethal effects was significantly affected by insecticide mode of action, with broad-spectrum insecticides being particularly harmful to parasitoid reproductive performance. Transgenic crops and toxins derived from such plants were generally associated with weaker sublethal effects than majority of synthetic insecticides. Nevertheless, species responses, even to the same insecticides and transgenic crops, showed high variability, cautioning against extrapolating results from individual studies to a wider range of species. Overall, our results indicate that sublethal side-effects on parasitoid reproductive performance represent a significant and widespread cost of insecticides that should explicitly be taken into account when evaluating their harmfulness. Linking laboratory results to field situations remains a key challenge for future research., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2019
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34. Structural and functional insights into the reaction specificity of catalase-related hydroperoxide lyase: A shift from lyase activity to allene oxide synthase by site-directed mutagenesis.
- Author
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Teder T, Lõhelaid H, and Samel N
- Subjects
- Aldehyde-Lyases isolation & purification, Amino Acid Sequence, Animals, Cytochrome P-450 Enzyme System isolation & purification, Electrophoresis, Polyacrylamide Gel, Hydrogen Peroxide metabolism, Intramolecular Oxidoreductases chemistry, Kinetics, Leukotrienes chemistry, Leukotrienes metabolism, Ligands, Molecular Docking Simulation, Mutant Proteins chemistry, Mutant Proteins metabolism, Protein Multimerization, Substrate Specificity, Aldehyde-Lyases chemistry, Aldehyde-Lyases metabolism, Anthozoa enzymology, Catalase metabolism, Cytochrome P-450 Enzyme System chemistry, Cytochrome P-450 Enzyme System metabolism, Intramolecular Oxidoreductases metabolism, Mutagenesis, Site-Directed methods
- Abstract
Two highly identical fusion proteins, an allene oxide synthase-lipoxygenase (AOS-LOX) and a hydroperoxide lyase-lipoxygenase (HPL-LOX), were identified in the soft coral Capnella imbricata. Both enzymes initially catalyze the formation of 8R-hydroperoxy-eicosatetraenoic acid (8R-HpETE) from arachidonic acid by the C-terminal lipoxygenase (LOX) domain. Despite the fact that the defined catalytically important residues of N-terminal catalase-related allene oxide synthase (cAOS) domain are also conserved in C. imbricata hydroperoxide lyase (cHPL), their reaction specificities differ. In the present study, we tested which of the amino acid substitutions around the active site of cHPL are responsible for a control in the reaction specificity. The possible candidates were determined via comparative sequence and structural analysis of the substrate channel and the heme region of coral cAOSs and C. imbricata cHPL. The amino acid replacements in cHPL-R56G, ME59-60LK, P65A, F150L, YS176-177NL, I357V, and SSSAGE155-160PVKEGD-with the corresponding residues of cAOS were conducted by site-directed mutagenesis. Although all these mutations influenced the catalytic efficiency of cHPL, only F150L and YS176-177NL substitutions caused a shift in the reaction specificity from HPL to AOS. The docking analysis of P. homomalla cAOS with 8R-HpETE substrate revealed that the Leu150 of cAOS interacts with the C5-C6 double bond and the Leu177 with the hydrophobic tail of 8R-HpETE. We propose that the corresponding residues in cHPL, Phe150 and Ser177, are involved in a proper coordination of the epoxy allylic radical intermediate necessary for aldehyde formation in the hydroperoxide lyase reaction.
- Published
- 2017
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35. Oxidation of C18 Hydroxy-Polyunsaturated Fatty Acids to Epoxide or Ketone by Catalase-Related Hemoproteins Activated with Iodosylbenzene.
- Author
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Teder T, Boeglin WE, and Brash AR
- Subjects
- Chromatography, High Pressure Liquid, Enzyme Activation, Fusarium enzymology, Hemeproteins metabolism, Humans, Magnetic Resonance Spectroscopy, Mycobacterium avium enzymology, Oxidation-Reduction, Pseudomonas fluorescens enzymology, Catalase metabolism, Epoxy Compounds chemistry, Fatty Acids, Unsaturated chemistry, Iodobenzenes metabolism, Ketones chemistry
- Abstract
Small catalase-related hemoproteins with a facility to react with fatty acid hydroperoxides were examined for their potential mono-oxygenase activity when activated using iodosylbenzene. The proteins tested were a Fusarium graminearum 41 kD catalase hemoprotein (Fg-cat, gene FGSG_02217), a Pseudomonas fluorescens Pfl01 catalase (37.5 kD, accession number WP_011333788.1), and a Mycobacterium avium ssp. paratuberculosis 33 kD catalase (gene MAP-2744c). 13-Hydroxy-octadecenoic acids (which are normally unreactive) were selected as substrates because these enzymes react specifically with the corresponding 13S-hydroperoxides (Pakhomova et al. 18:2559-2568, 5; Teder et al. 1862:706-715, 14). In the presence of iodosylbenzene Fg-cat converted 13S-hydroxy-fatty acids to two products: the 15,16-double bond of 13S-hydroxy α-linolenic acid was oxidized stereospecifically to the 15S,16R-cis-epoxide or the 13-hydroxyl was oxidized to the 13-ketone. Products were identified by UV, HPLC, LC-MS, NMR and by comparison with authentic standards prepared for this study. The Pfl01-cat displayed similar activity. MAP-2744c oxidized 13S-hydroxy-linoleic acid to the 13-ketone, and epoxidized the double bonds to form the 9,10-epoxy-13-hydroxy, 11,12-epoxy-13-hydroxy, and 9,10-epoxy-13-keto derivatives; equivalent transformations occurred with 9S-hydroxy-linoleic acid as substrate. In parallel incubations in the presence of iodosylbenzene, human catalase displayed no activity towards 13S-hydroxy-linoleic acid, as expected from the highly restricted access to its active site. The results indicated that with suitable transformation to Compound I, monooxygenase activity can be demonstrated by these catalase-related hemoproteins with tyrosine as the proximal heme ligand.
- Published
- 2017
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36. A fungal catalase reacts selectively with the 13S fatty acid hydroperoxide products of the adjacent lipoxygenase gene and exhibits 13S-hydroperoxide-dependent peroxidase activity.
- Author
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Teder T, Boeglin WE, Schneider C, and Brash AR
- Subjects
- Cyclopentanes metabolism, Intramolecular Oxidoreductases metabolism, Linoleic Acid metabolism, Lipid Peroxides metabolism, Oleic Acids metabolism, Oxidation-Reduction, Oxylipins metabolism, Stereoisomerism, tert-Butylhydroperoxide metabolism, Catalase metabolism, Fatty Acids metabolism, Fungal Proteins metabolism, Hydrogen Peroxide metabolism, Lipoxygenase metabolism, Peroxidase metabolism, Yeasts metabolism
- Abstract
The genome of the fungal plant pathogen Fusarium graminearum harbors six catalases, one of which has the sequence characteristics of a fatty acid peroxide-metabolizing catalase. We cloned and expressed this hemoprotein (designated as Fg-cat) along with its immediate neighbor, a 13S-lipoxygenase (cf. Brodhun et al., PloS One, e64919, 2013) that we considered might supply a fatty acid hydroperoxide substrate. Indeed, Fg-cat reacts abruptly with the 13S-hydroperoxide of linoleic acid (13S-HPODE) with an initial rate of 700-1300s
-1 . By comparison there was no reaction with 9R- or 9S-HPODEs and extremely weak reaction with 13R-HPODE (~0.5% of the rate with 13S-HPODE). Although we considered Fg-cat as a candidate for the allene oxide synthase of the jasmonate pathway in fungi, the main product formed from 13S-HPODE was identified by UV, MS, and NMR as 9-oxo-10E-12,13-cis-epoxy-octadecenoic acid (with no traces of AOS activity). The corresponding analog is formed from the 13S-hydroperoxide of α-linolenic acid along with novel diepoxy-ketones and two C13 aldehyde derivatives, the reaction mechanisms of which are proposed. In a peroxidase assay monitoring the oxidation of ABTS, Fg-cat exhibited robust activity (kcat 550s-1 ) using the 13S-hydroperoxy-C18 fatty acids as the oxidizing co-substrate. There was no detectable peroxidase activity using the corresponding 9S-hydroperoxides, nor with t-butyl hydroperoxide, and very weak activity with H2 O2 or cumene hydroperoxide at micromolar concentrations of Fg-cat. Fg-cat and the associated lipoxygenase gene are present together in fungal genera Fusarium, Metarhizium and Fonsecaea and appear to constitute a partnership for oxidations in fungal metabolism or defense., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
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37. Higher predation risk for insect prey at low latitudes and elevations.
- Author
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Roslin T, Hardwick B, Novotny V, Petry WK, Andrew NR, Asmus A, Barrio IC, Basset Y, Boesing AL, Bonebrake TC, Cameron EK, Dáttilo W, Donoso DA, Drozd P, Gray CL, Hik DS, Hill SJ, Hopkins T, Huang S, Koane B, Laird-Hopkins B, Laukkanen L, Lewis OT, Milne S, Mwesige I, Nakamura A, Nell CS, Nichols E, Prokurat A, Sam K, Schmidt NM, Slade A, Slade V, Suchanková A, Teder T, van Nouhuys S, Vandvik V, Weissflog A, Zhukovich V, and Slade EM
- Subjects
- Animals, Arthropods physiology, Birds physiology, Herbivory, Mammals physiology, Altitude, Biodiversity, Food Chain, Geography, Insecta, Larva, Predatory Behavior
- Abstract
Biotic interactions underlie ecosystem structure and function, but predicting interaction outcomes is difficult. We tested the hypothesis that biotic interaction strength increases toward the equator, using a global experiment with model caterpillars to measure predation risk. Across an 11,660-kilometer latitudinal gradient spanning six continents, we found increasing predation toward the equator, with a parallel pattern of increasing predation toward lower elevations. Patterns across both latitude and elevation were driven by arthropod predators, with no systematic trend in attack rates by birds or mammals. These matching gradients at global and regional scales suggest consistent drivers of biotic interaction strength, a finding that needs to be integrated into general theories of herbivory, community organization, and life-history evolution., (Copyright © 2017, American Association for the Advancement of Science.)
- Published
- 2017
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38. The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project.
- Author
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Hudson LN, Newbold T, Contu S, Hill SL, Lysenko I, De Palma A, Phillips HR, Alhusseini TI, Bedford FE, Bennett DJ, Booth H, Burton VJ, Chng CW, Choimes A, Correia DL, Day J, Echeverría-Londoño S, Emerson SR, Gao D, Garon M, Harrison ML, Ingram DJ, Jung M, Kemp V, Kirkpatrick L, Martin CD, Pan Y, Pask-Hale GD, Pynegar EL, Robinson AN, Sanchez-Ortiz K, Senior RA, Simmons BI, White HJ, Zhang H, Aben J, Abrahamczyk S, Adum GB, Aguilar-Barquero V, Aizen MA, Albertos B, Alcala EL, Del Mar Alguacil M, Alignier A, Ancrenaz M, Andersen AN, Arbeláez-Cortés E, Armbrecht I, Arroyo-Rodríguez V, Aumann T, Axmacher JC, Azhar B, Azpiroz AB, Baeten L, Bakayoko A, Báldi A, Banks JE, Baral SK, Barlow J, Barratt BI, Barrico L, Bartolommei P, Barton DM, Basset Y, Batáry P, Bates AJ, Baur B, Bayne EM, Beja P, Benedick S, Berg Å, Bernard H, Berry NJ, Bhatt D, Bicknell JE, Bihn JH, Blake RJ, Bobo KS, Bóçon R, Boekhout T, Böhning-Gaese K, Bonham KJ, Borges PA, Borges SH, Boutin C, Bouyer J, Bragagnolo C, Brandt JS, Brearley FQ, Brito I, Bros V, Brunet J, Buczkowski G, Buddle CM, Bugter R, Buscardo E, Buse J, Cabra-García J, Cáceres NC, Cagle NL, Calviño-Cancela M, Cameron SA, Cancello EM, Caparrós R, Cardoso P, Carpenter D, Carrijo TF, Carvalho AL, Cassano CR, Castro H, Castro-Luna AA, Rolando CB, Cerezo A, Chapman KA, Chauvat M, Christensen M, Clarke FM, Cleary DF, Colombo G, Connop SP, Craig MD, Cruz-López L, Cunningham SA, D'Aniello B, D'Cruze N, da Silva PG, Dallimer M, Danquah E, Darvill B, Dauber J, Davis AL, Dawson J, de Sassi C, de Thoisy B, Deheuvels O, Dejean A, Devineau JL, Diekötter T, Dolia JV, Domínguez E, Dominguez-Haydar Y, Dorn S, Draper I, Dreber N, Dumont B, Dures SG, Dynesius M, Edenius L, Eggleton P, Eigenbrod F, Elek Z, Entling MH, Esler KJ, de Lima RF, Faruk A, Farwig N, Fayle TM, Felicioli A, Felton AM, Fensham RJ, Fernandez IC, Ferreira CC, Ficetola GF, Fiera C, Filgueiras BK, Fırıncıoğlu HK, Flaspohler D, Floren A, Fonte SJ, Fournier A, Fowler RE, Franzén M, Fraser LH, Fredriksson GM, Freire GB Jr, Frizzo TL, Fukuda D, Furlani D, Gaigher R, Ganzhorn JU, García KP, Garcia-R JC, Garden JG, Garilleti R, Ge BM, Gendreau-Berthiaume B, Gerard PJ, Gheler-Costa C, Gilbert B, Giordani P, Giordano S, Golodets C, Gomes LG, Gould RK, Goulson D, Gove AD, Granjon L, Grass I, Gray CL, Grogan J, Gu W, Guardiola M, Gunawardene NR, Gutierrez AG, Gutiérrez-Lamus DL, Haarmeyer DH, Hanley ME, Hanson T, Hashim NR, Hassan SN, Hatfield RG, Hawes JE, Hayward MW, Hébert C, Helden AJ, Henden JA, Henschel P, Hernández L, Herrera JP, Herrmann F, Herzog F, Higuera-Diaz D, Hilje B, Höfer H, Hoffmann A, Horgan FG, Hornung E, Horváth R, Hylander K, Isaacs-Cubides P, Ishida H, Ishitani M, Jacobs CT, Jaramillo VJ, Jauker B, Hernández FJ, Johnson MF, Jolli V, Jonsell M, Juliani SN, Jung TS, Kapoor V, Kappes H, Kati V, Katovai E, Kellner K, Kessler M, Kirby KR, Kittle AM, Knight ME, Knop E, Kohler F, Koivula M, Kolb A, Kone M, Kőrösi Á, Krauss J, Kumar A, Kumar R, Kurz DJ, Kutt AS, Lachat T, Lantschner V, Lara F, Lasky JR, Latta SC, Laurance WF, Lavelle P, Le Féon V, LeBuhn G, Légaré JP, Lehouck V, Lencinas MV, Lentini PE, Letcher SG, Li Q, Litchwark SA, Littlewood NA, Liu Y, Lo-Man-Hung N, López-Quintero CA, Louhaichi M, Lövei GL, Lucas-Borja ME, Luja VH, Luskin MS, MacSwiney G MC, Maeto K, Magura T, Mallari NA, Malone LA, Malonza PK, Malumbres-Olarte J, Mandujano S, Måren IE, Marin-Spiotta E, Marsh CJ, Marshall EJ, Martínez E, Martínez Pastur G, Moreno Mateos D, Mayfield MM, Mazimpaka V, McCarthy JL, McCarthy KP, McFrederick QS, McNamara S, Medina NG, Medina R, Mena JL, Mico E, Mikusinski G, Milder JC, Miller JR, Miranda-Esquivel DR, Moir ML, Morales CL, Muchane MN, Muchane M, Mudri-Stojnic S, Munira AN, Muoñz-Alonso A, Munyekenye BF, Naidoo R, Naithani A, Nakagawa M, Nakamura A, Nakashima Y, Naoe S, Nates-Parra G, Navarrete Gutierrez DA, Navarro-Iriarte L, Ndang'ang'a PK, Neuschulz EL, Ngai JT, Nicolas V, Nilsson SG, Noreika N, Norfolk O, Noriega JA, Norton DA, Nöske NM, Nowakowski AJ, Numa C, O'Dea N, O'Farrell PJ, Oduro W, Oertli S, Ofori-Boateng C, Oke CO, Oostra V, Osgathorpe LM, Otavo SE, Page NV, Paritsis J, Parra-H A, Parry L, Pe'er G, Pearman PB, Pelegrin N, Pélissier R, Peres CA, Peri PL, Persson AS, Petanidou T, Peters MK, Pethiyagoda RS, Phalan B, Philips TK, Pillsbury FC, Pincheira-Ulbrich J, Pineda E, Pino J, Pizarro-Araya J, Plumptre AJ, Poggio SL, Politi N, Pons P, Poveda K, Power EF, Presley SJ, Proença V, Quaranta M, Quintero C, Rader R, Ramesh BR, Ramirez-Pinilla MP, Ranganathan J, Rasmussen C, Redpath-Downing NA, Reid JL, Reis YT, Rey Benayas JM, Rey-Velasco JC, Reynolds C, Ribeiro DB, Richards MH, Richardson BA, Richardson MJ, Ríos RM, Robinson R, Robles CA, Römbke J, Romero-Duque LP, Rös M, Rosselli L, Rossiter SJ, Roth DS, Roulston TH, Rousseau L, Rubio AV, Ruel JC, Sadler JP, Sáfián S, Saldaña-Vázquez RA, Sam K, Samnegård U, Santana J, Santos X, Savage J, Schellhorn NA, Schilthuizen M, Schmiedel U, Schmitt CB, Schon NL, Schüepp C, Schumann K, Schweiger O, Scott DM, Scott KA, Sedlock JL, Seefeldt SS, Shahabuddin G, Shannon G, Sheil D, Sheldon FH, Shochat E, Siebert SJ, Silva FA, Simonetti JA, Slade EM, Smith J, Smith-Pardo AH, Sodhi NS, Somarriba EJ, Sosa RA, Soto Quiroga G, St-Laurent MH, Starzomski BM, Stefanescu C, Steffan-Dewenter I, Stouffer PC, Stout JC, Strauch AM, Struebig MJ, Su Z, Suarez-Rubio M, Sugiura S, Summerville KS, Sung YH, Sutrisno H, Svenning JC, Teder T, Threlfall CG, Tiitsaar A, Todd JH, Tonietto RK, Torre I, Tóthmérész B, Tscharntke T, Turner EC, Tylianakis JM, Uehara-Prado M, Urbina-Cardona N, Vallan D, Vanbergen AJ, Vasconcelos HL, Vassilev K, Verboven HA, Verdasca MJ, Verdú JR, Vergara CH, Vergara PM, Verhulst J, Virgilio M, Vu LV, Waite EM, Walker TR, Wang HF, Wang Y, Watling JI, Weller B, Wells K, Westphal C, Wiafe ED, Williams CD, Willig MR, Woinarski JC, Wolf JH, Wolters V, Woodcock BA, Wu J, Wunderle JM Jr, Yamaura Y, Yoshikura S, Yu DW, Zaitsev AS, Zeidler J, Zou F, Collen B, Ewers RM, Mace GM, Purves DW, Scharlemann JP, and Purvis A
- Abstract
The PREDICTS project-Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)-has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
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- 2016
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39. Polyphagy on unpredictable resources does not exclude host specialization: insects feeding on mushrooms.
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Põldmaa K, Kaasik A, Tammaru T, Kurina O, Jürgenstein S, and Teder T
- Subjects
- Animals, Ecology, Agaricales, Host Specificity, Insecta
- Abstract
The degree of ecological specialization plays a crucial role in shaping the structure and functioning of communities. However, comparing specialization within and among groups of organisms is complicated by both methodological issues and conceptual and terminological inconsistencies. Environmental predictability has been considered a key determinant of specialization though empirical evidence is still limited. Fungi and their insect consumers provide a poorly studied but promising system to measure host specialization and test the predictability hypothesis. In this study, we systematically sampled mushrooms in North European boreal forest, and reared total samples of fungivores colonizing the fruitbodies. Due to the unpredictable nature of mushrooms as a resource, low levels of host specialization can be predicted for these insects, which have indeed widely been considered polyphagous. Contrary to expectations, the majority of the studied fungus gnats were found not to exploit their host taxa indiscriminately. Not only were some mushroom taxa never colonized, the infestation rate of acceptable hosts also differed in most of these fungivores. Gnat species themselves formed continua with respect to the estimates of the degree of specialization, derived from parametric individual-based analyses of presence-absence data. In most cases, host use was best explained by models in which the hosts were classified at genus level, with limited support to specialization to particular host species, families, or orders. Indeed, most of the common fungivores appeared to preferentially use various species from one or a few mushroom genera while occasionally feeding on members of other host taxa. This pattern has likely evolved as a compromise between selective forces stemming from host unpredictability and taxon-specific chemical profiles of the mushrooms. Our study highlights the multidimensional nature of ecological specialization: a high number of acceptable hosts does not preclude considerable discrimination among members of the available resource pool. Such situations can only be revealed by individual-based analyses capable of capturing differences in partner-to-partner interaction intensities., (© 2016 by the Ecological Society of America.)
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- 2016
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40. A Catalase-related Hemoprotein in Coral Is Specialized for Synthesis of Short-chain Aldehydes: DISCOVERY OF P450-TYPE HYDROPEROXIDE LYASE ACTIVITY IN A CATALASE.
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Teder T, Lõhelaid H, Boeglin WE, Calcutt WM, Brash AR, and Samel N
- Subjects
- Aldehyde-Lyases genetics, Animals, Anthozoa genetics, Catalase genetics, Cytochrome P-450 Enzyme System genetics, Escherichia coli genetics, Escherichia coli metabolism, Gene Expression, Oxygen Isotopes, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Aldehyde-Lyases metabolism, Aldehydes metabolism, Anthozoa enzymology, Catalase metabolism, Cytochrome P-450 Enzyme System metabolism, Leukotrienes metabolism
- Abstract
In corals a catalase-lipoxygenase fusion protein transforms arachidonic acid to the allene oxide 8R,9-epoxy-5,9,11,14-eicosatetraenoic acid from which arise cyclopentenones such as the prostanoid-related clavulones. Recently we cloned two catalase-lipoxygenase fusion protein genes (a and b) from the coral Capnella imbricata, form a being an allene oxide synthase and form b giving uncharacterized polar products (Lõhelaid, H., Teder, T., Tõldsepp, K., Ekins, M., and Samel, N. (2014) PloS ONE 9, e89215). Here, using HPLC-UV, LC-MS, and NMR methods, we identify a novel activity of fusion protein b, establishing its role in cleaving the lipoxygenase product 8R-hydroperoxy-eicosatetraenoic acid into the short-chain aldehydes (5Z)-8-oxo-octenoic acid and (3Z,6Z)-dodecadienal; these primary products readily isomerize in an aqueous medium to the corresponding 6E- and 2E,6Z derivatives. This type of enzymatic cleavage, splitting the carbon chain within the conjugated diene of the hydroperoxide substrate, is known only in plant cytochrome P450 hydroperoxide lyases. In mechanistic studies using (18)O-labeled substrate and incubations in H2(18)O, we established synthesis of the C8-oxo acid and C12 aldehyde with the retention of the hydroperoxy oxygens, consistent with synthesis of a short-lived hemiacetal intermediate that breaks down spontaneously into the two aldehydes. Taken together with our initial studies indicating differing gene regulation of the allene oxide synthase and the newly identified catalase-related hydroperoxide lyase and given the role of aldehydes in plant defense, this work uncovers a potential pathway in coral stress signaling and a novel enzymatic activity in the animal kingdom., (© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.)
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- 2015
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41. Lipoxygenase-catalyzed transformation of epoxy fatty acids to hydroxy-endoperoxides: a potential P450 and lipoxygenase interaction.
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Teder T, Boeglin WE, and Brash AR
- Subjects
- 8,11,14-Eicosatrienoic Acid analogs & derivatives, 8,11,14-Eicosatrienoic Acid chemistry, 8,11,14-Eicosatrienoic Acid metabolism, Animals, Arachidonate 12-Lipoxygenase genetics, Arachidonate 15-Lipoxygenase genetics, Biocatalysis, Blood Platelets enzymology, Chromatography, High Pressure Liquid, Eicosanoids chemistry, Epoxy Compounds chemistry, Epoxy Compounds metabolism, Gas Chromatography-Mass Spectrometry, Humans, Hydroxylation, Linolenic Acids chemistry, Lipid Peroxides chemistry, Mice, Molecular Structure, Nuclear Magnetic Resonance, Biomolecular, Oxidation-Reduction, Recombinant Proteins metabolism, Spectrometry, Mass, Electrospray Ionization, Stereoisomerism, Arachidonate 12-Lipoxygenase metabolism, Arachidonate 15-Lipoxygenase metabolism, Eicosanoids metabolism, Linolenic Acids metabolism, Lipid Peroxides metabolism, Lipoxygenase metabolism, Soybean Proteins metabolism
- Abstract
Herein, we characterize a generally applicable transformation of fatty acid epoxides by lipoxygenase (LOX) enzymes that results in the formation of a five-membered endoperoxide ring in the end product. We demonstrated this transformation using soybean LOX-1 in the metabolism of 15,16-epoxy-α-linolenic acid, and murine platelet-type 12-LOX and human 15-LOX-1 in the metabolism of 14,15-epoxyeicosatrienoic acid (14,15-EET). A detailed examination of the transformation of the two enantiomers of 15,16-epoxy-α-linolenic acid by soybean LOX-1 revealed that the expected primary product, a 13S-hydroperoxy-15,16-epoxide, underwent a nonenzymatic transformation in buffer into a new derivative that was purified by HPLC and identified by UV, LC-MS, and ¹H-NMR as a 13,15-endoperoxy-16-hydroxy-octadeca-9,11-dienoic acid. The configuration of the endoperoxide (cis or trans side chains) depended on the steric relationship of the new hydroperoxy moiety to the enantiomeric configuration of the fatty acid epoxide. The reaction mechanism involves intramolecular nucleophilic substitution (SNi) between the hydroperoxy (nucleophile) and epoxy group (electrophile). Equivalent transformations were documented in metabolism of the enantiomers of 14,15-EET by the two mammalian LOX enzymes, 15-LOX-1 and platelet-type 12-LOX. We conclude that this type of transformation could occur naturally with the co-occurrence of LOX and cytochrome P450 or peroxygenase enzymes, and it could also contribute to the complexity of products formed in the autoxidation reactions of polyunsaturated fatty acids., (Copyright © 2014 by the American Society for Biochemistry and Molecular Biology, Inc.)
- Published
- 2014
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42. Age and size at maturity: a quantitative review of diet-induced reaction norms in insects.
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Teder T, Vellau H, and Tammaru T
- Subjects
- Animals, Body Size, Diet, Insecta genetics, Time Factors, Insecta classification, Insecta growth & development
- Abstract
Optimality models predict that diet-induced bivariate reaction norms for age and size at maturity can have diverse shapes, with the slope varying from negative to positive. To evaluate these predictions, we perform a quantitative review of relevant data, using a literature-derived database of body sizes and development times for over 200 insect species. We show that bivariate reaction norms with a negative slope prevail in nearly all taxonomic and ecological categories of insects as well as in some other ectotherm taxa with comparable life histories (arachnids and amphibians). In insects, positive slopes are largely limited to species, which feed on discrete resource items, parasitoids in particular. By contrast, with virtually no meaningful exceptions, herbivorous and predatory insects display reaction norms with a negative slope. This is consistent with the idea that predictable resource depletion, a scenario selecting for positively sloped reaction norms, is not frequent for these insects. Another source of such selection-a positive correlation between resource levels and juvenile mortality rates-should similarly be rare among insects. Positive slopes can also be predicted by models which integrate life-history evolution and population dynamics. As bottom-up regulation is not common in most insect groups, such models may not be most appropriate for insects., (© 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.)
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- 2014
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43. Up-regulated expression of AOS-LOXa and increased eicosanoid synthesis in response to coral wounding.
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Lõhelaid H, Teder T, Tõldsepp K, Ekins M, and Samel N
- Subjects
- Animals, Arachidonic Acid metabolism, Chromatography, High Pressure Liquid, Chromatography, Reverse-Phase, Gene Expression Regulation, Enzymologic, Intramolecular Oxidoreductases metabolism, Lipoxygenase metabolism, RNA, Messenger genetics, RNA, Messenger metabolism, Real-Time Polymerase Chain Reaction, Sequence Analysis, Protein, Anthozoa enzymology, Anthozoa genetics, Intramolecular Oxidoreductases genetics, Stress, Physiological, Up-Regulation
- Abstract
In octocorals, a catalase-like allene oxide synthase (AOS) and an 8R-lipoxygenase (LOX) gene are fused together encoding for a single AOS-LOX fusion protein. Although the AOS-LOX pathway is central to the arachidonate metabolism in corals, its biological function in coral homeostasis is unclear. Using an acute incision wound model in the soft coral Capnella imbricata, we here test whether LOX pathway, similar to its role in plants, can contribute to the coral damage response and regeneration. Analysis of metabolites formed from exogenous arachidonate before and after fixed time intervals following wounding indicated a significant increase in AOS-LOX activity in response to mechanical injury. Two AOS-LOX isoforms, AOS-LOXa and AOS-LOXb, were cloned and expressed in bacterial expression system as active fusion proteins. Transcription levels of corresponding genes were measured in normal and stressed coral by qPCR. After wounding, AOS-LOXa was markedly up-regulated in both, the tissue adjacent to the incision and distal parts of a coral colony (with the maximum reached at 1 h and 6 h post wounding, respectively), while AOS-LOXb was stable. According to mRNA expression analysis, combined with detection of eicosanoid product formation for the first time, the AOS-LOX was identified as an early stress response gene which is induced by mechanical injury in coral.
- Published
- 2014
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44. The effects of seasonally variable dragonfly predation on butterfly assemblages.
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Tiitsaar A, Kaasik A, and Teder T
- Subjects
- Animals, Estonia, Butterflies physiology, Ecosystem, Odonata physiology, Predatory Behavior physiology, Seasons
- Abstract
Where predation is seasonally variable, the potential impact of a predator on individual prey species will critically depend on phenological synchrony of the predator with the prey. Here we explored the effects of seasonally variable predation in multispecies assemblages of short-lived prey. The study was conducted in a landscape in which we had previously demonstrated generally high, but spatially and seasonally variable dragonfly-induced mortality in adult butterflies. In this system, we show that patterns of patch occupancy in butterfly species flying during periods of peak dragonfly abundance are more strongly associated with spatial variation in dragonfly abundance than patch occupancy of species flying when dragonfly density was low. We provide evidence indicating that this differential sensitivity of different butterfly species to between-habitat differences in dragonfly abundance is causally tied to seasonal variation in the intensity of dragonfly predation. The effect of dragonfly predation could also be measured at the level of whole local butterfly assemblages. With dragonfly density increasing, butterfly species richness decreased, and butterfly species composition tended to show a shift toward a greater proportion of species flying during periods of off-peak dragonfly abundance.
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- 2013
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45. Sexual differences in weight loss upon eclosion are related to life history strategy in Lepidoptera.
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Molleman F, Javoiš J, Esperk T, Teder T, Davis RB, and Tammaru T
- Subjects
- Animals, Breeding, Female, Male, Pupa growth & development, Pupa metabolism, Species Specificity, Weight Loss, Lepidoptera growth & development, Lepidoptera metabolism, Water metabolism
- Abstract
Given that immature and adult insects have different life styles, different target body compositions can be expected. For adults, such targets will also differ depending on life history strategy, and thus vary among the sexes, and in females depend on the degree of capital versus income breeding and ovigeny. Since these targets may in part be approximated by loss of substances upon eclosion, comparing sexual differences in such losses upon eclosion among species that differ in life history would provide insights into insect functional ecology. We studied weight loss in eclosing insects using original data on pupal and adult live weights of 38 species of Lepidoptera (mainly Geometridae) and further literature data on 15 species of Lepidoptera and six representatives of other insect orders, and applied the phylogenetic independent contrasts approach. In addition, data on live and dry weights of pupae of four species of Lepidoptera are presented. We documented that Lepidoptera typically lose a large proportion (20-80%) of their pupal weight upon adult eclosion. Sexual differences in weight loss varied between absent and strongly male biased. Most of the weight loss was water loss, and sexual differences in adult water content correlate strongly with differences in weight loss. Using feeding habits (feeds or does not feed as an adult) and female biased sexual size dimorphism as measures of degree of capital breeding, we found that the difference among the sexes in weight loss tends to be more pronounced in capital breeding species. Additionally, females of more pro-ovigenic species (large proportion of eggs mature upon emergence) tend to have higher water contents. Our results suggests that metamorphosis is generally facilitated by a high water content, while adults excrete water upon eclosion to benefit flight unless water has been allocated to eggs, or is treated as a capital resource for adult survival or future allocation to eggs., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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46. Habitat fragmentation causes immediate and time-delayed biodiversity loss at different trophic levels.
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Krauss J, Bommarco R, Guardiola M, Heikkinen RK, Helm A, Kuussaari M, Lindborg R, Ockinger E, Pärtel M, Pino J, Pöyry J, Raatikainen KM, Sang A, Stefanescu C, Teder T, Zobel M, and Steffan-Dewenter I
- Subjects
- Animals, Europe, Extinction, Biological, Biodiversity, Butterflies classification, Ecosystem, Plants classification
- Abstract
Intensification or abandonment of agricultural land use has led to a severe decline of semi-natural habitats across Europe. This can cause immediate loss of species but also time-delayed extinctions, known as the extinction debt. In a pan-European study of 147 fragmented grassland remnants, we found differences in the extinction debt of species from different trophic levels. Present-day species richness of long-lived vascular plant specialists was better explained by past than current landscape patterns, indicating an extinction debt. In contrast, short-lived butterfly specialists showed no evidence for an extinction debt at a time scale of c. 40 years. Our results indicate that management strategies maintaining the status quo of fragmented habitats are insufficient, as time-delayed extinctions and associated co-extinctions will lead to further biodiversity loss in the future.
- Published
- 2010
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47. Sex differences in phenotypic plasticity affect variation in sexual size dimorphism in insects: from physiology to evolution.
- Author
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Stillwell RC, Blanckenhorn WU, Teder T, Davidowitz G, and Fox CW
- Subjects
- Animals, Female, Male, Selection, Genetic, Biological Evolution, Body Size, Insecta physiology, Phenotype, Sex Characteristics
- Abstract
Males and females of nearly all animals differ in their body size, a phenomenon called sexual size dimorphism (SSD). The degree and direction of SSD vary considerably among taxa, including among populations within species. A considerable amount of this variation is due to sex differences in body size plasticity. We examine how variation in these sex differences is generated by exploring sex differences in plasticity in growth rate and development time and the physiological regulation of these differences (e.g., sex differences in regulation by the endocrine system). We explore adaptive hypotheses proposed to explain sex differences in plasticity, including those that predict that plasticity will be lowest for traits under strong selection (adaptive canalization) or greatest for traits under strong directional selection (condition dependence), but few studies have tested these hypotheses. Studies that combine proximate and ultimate mechanisms offer great promise for understanding variation in SSD and sex differences in body size plasticity in insects.
- Published
- 2010
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48. Counterintuitive size patterns in bivoltine moths: late-season larvae grow larger despite lower food quality.
- Author
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Teder T, Esperk T, Remmel T, Sang A, and Tammaru T
- Subjects
- Adaptation, Physiological, Animals, Body Size, Feeding Behavior, Larva anatomy & histology, Larva growth & development, Larva physiology, Moths anatomy & histology, Moths physiology, Temperature, Moths growth & development, Seasons, Stress, Physiological
- Abstract
Within a season, successive generations of short-lived organisms experience different combinations of environmental parameters, such as temperature, food quality and mortality risk. Adult body size of e.g. insects is therefore expected to vary both as a consequence of proximate environmental effects as well as adaptive responses to seasonal cues. In this study, we examined intraspecific differences in body size between successive generations in 12 temperate bivoltine moths (Lepidoptera), with the ultimate goal to critically compare the role of proximate and adaptive mechanisms in determining seasonal size differences. In nearly all species, individuals developing late in the season (diapausing generation) attained a larger adult size than their conspecifics with the larval period early in the season (directly developing generation) despite the typically lower food quality in late summer. Rearing experiments conducted on one of the studied species, Selenia tetralunaria also largely exclude the possibility that the proximate effects of food quality and temperature are decisive in determining size differences between successive generations. Adaptive explanations appear likely instead: the larger body size in the diapausing generation may be adaptively associated with the lower bird predation pressure late in the season, and/or the likely advantage of large pupal size during overwintering.
- Published
- 2010
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49. Extinction debt: a challenge for biodiversity conservation.
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Kuussaari M, Bommarco R, Heikkinen RK, Helm A, Krauss J, Lindborg R, Ockinger E, Pärtel M, Pino J, Rodà F, Stefanescu C, Teder T, Zobel M, and Steffan-Dewenter I
- Subjects
- Animals, Biodiversity, Conservation of Natural Resources, Extinction, Biological
- Abstract
Local extinction of species can occur with a substantial delay following habitat loss or degradation. Accumulating evidence suggests that such extinction debts pose a significant but often unrecognized challenge for biodiversity conservation across a wide range of taxa and ecosystems. Species with long generation times and populations near their extinction threshold are most likely to have an extinction debt. However, as long as a species that is predicted to become extinct still persists, there is time for conservation measures such as habitat restoration and landscape management. Standardized long-term monitoring, more high-quality empirical studies on different taxa and ecosystems and further development of analytical methods will help to better quantify extinction debt and protect biodiversity.
- Published
- 2009
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50. Dependence of phenotypic variance in body size on environmental quality.
- Author
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Teder T, Tammaru T, and Esperk T
- Subjects
- Animals, Female, Male, Body Size, Environment, Genetic Variation, Insecta physiology, Models, Biological, Phenotype
- Abstract
The recent "overhead threshold" model for optimal age and body size at maturity (Day and Rowe 2002 ) predicts that phenotypic variability in adult body size will be low under inferior environmental quality and will increase with improving conditions. The model is, however, based on a potentially restrictive assumption of a monotone increase of fecundity with increasing body size. On the basis of a numerical model, we show that introducing the concept of maximum adult body size changes the predictions of the model. The dependence of variability in adult body size on environmental quality becomes a concave function with a maximum at intermediate values. Depending on the range of environmental conditions considered, one may therefore expect to observe both increasing and decreasing functions. We test the predictions of our model on a literature-based database of 131 insect species covering all major orders. We demonstrate that, in most species, relative phenotypic variation in body size decreases when environment-specific average of adult body size increases. In the majority of cases at least, such a relationship can be interpreted as a decreased relative variation in better growing conditions. With some potentially meaningful exceptions (e.g., females of capital-breeding insects), the general pattern was largely invariable across different taxa, ecological subdivisions, and sexes.
- Published
- 2008
- Full Text
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