71 results on '"Talambedu Usha"'
Search Results
2. Current Challenges of Vaccination in Fish Health Management
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Avnish Kumar, Sushil Kumar Middha, Soumya Vettiyatil Menon, Biswaranjan Paital, Shyam Gokarn, Meghana Nelli, Rakshith Bangalore Rajanikanth, Harish Mani Chandra, Susithra Priyadarshni Mugunthan, Sanwar Mal Kantwa, Talambedu Usha, Akshaya Kumar Hati, Divyadharshini Venkatesan, Abira Rajendran, Tapas Ranjan Behera, Swarupa Venkatesamurthy, and Dipak Kumar Sahoo
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fish vaccine ,aquaculture ,antibiotic ,fish infectious diseases ,environmental safety ,global market ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Vaccination is an essential method of immunological preventive care required for the health management of all animals, including fish. More particularly, immunization is necessary for in-land aquaculture to manage diseases in fish broodstocks and healthy seed production. According to the latest statistics in 2020, 90.3 million tons of capture fishery production was achieved from the aquaculture sector. Out of the above, 78.8 million tons were from marine water aquaculture sectors, and 11.5 million tons were from inland water aquaculture sectors. About a 4% decline in fish production was achieved in 2020 in comparison to 2018 from inland aquaculture sectors. On the other hand, the digestive protein content, healthy fats, and nutritional values of fish products are comparatively more affordable than in other meat sources. In 2014, about 10% of aquatic cultured animals were lost (costing global annual losses > USD 10 billion) due to infectious diseases. Therefore, vaccination in fish, especially in broodstocks, is one of the essential approaches to stop such losses in the aquaculture sector. Fish vaccines consist of whole-killed pathogens, protein subunits, recombinant proteins, DNA, or live-attenuated vaccines. Challenges persist in the adaption of vaccination in the aquaculture sector, the route of administration, the use of effective adjuvants, and, most importantly, the lack of effective results. The use of autogenous vaccines; vaccination via intramuscular, intraperitoneal, or oral routes; and, most importantly, adding vaccines in feed using top dressing methods or as a constituent in fish feed are now emerging. These methods will lower the risk of using antibiotics in cultured water by reducing environmental contamination.
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- 2024
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3. Valorization of bamboo charcoal as a low-cost adsorbent for waste water treatment: A mini review
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Illora Narzary, Rinki Kumari Mahato, Sushil Kumar Middha, Talambedu Usha, and Arvind Kumar Goyal
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Bamboo charcoal ,Dye ,Wastewater ,Kinetic model ,Isotherm data ,Forestry ,SD1-669.5 - Abstract
The World Health Organization has reported that over one million individuals drink contaminated water, resulting in over 30,000 deaths daily. Every year, over 7×107 tons of synthetic dyes are produced globally, with the textile industry utilizing over 104 tons of such materials. To protect freshwater from pollutants, wastewater treatment methods such as permeable reactive barrier disinfection use activated carbon. Bamboo charcoal is an emerging substance with great potential in this area. Bamboos represent a renewable biological resource for long-term development. This paper reviews the dye removal processes that can be utilized to avoid water pollution, using bamboo charcoal as a natural adsorbent. A literature search using used various keywords from several bibliographic databases yielded seven studies that supported the adsorptive properties of bamboo charcoal. These investigations used FTIR, EDS, SEM and XRD to demonstrate the porous nature of bamboo charcoal, activated bamboo charcoal and/or modified bamboo charcoal, as well as showing the effects of pH and temperature on dye removal. The best-fitting kinetic model and isotherm data were identified. Bamboo charcoal was an effective adsorbent, while modified or activated bamboo charcoal rapidly increased absorptive capacity, indicating the future potential of bamboo charcoal in the cleaning up of water pollutants and contributing to a clean environment.
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- 2024
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4. Water physicochemical factors and oxidative stress physiology in fish, a review
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Soumya V. Menon, Avnish Kumar, Sushil Kumar Middha, Biswaranjan Paital, Shivangi Mathur, Rajee Johnson, Asha Kademan, Talambedu Usha, K. N. Hemavathi, Sangeeta Dayal, Nirmaladevi Ramalingam, Udayadharshini Subaramaniyam, Dipak Kumar Sahoo, and Monika Asthana
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abiotic factors ,disease ,economic value ,fish health ,oxidative stress ,physiology ,Environmental sciences ,GE1-350 - Abstract
Fish are among the best-studied aquatic animals due to their economic and ecological values. Fish meat is the most affordable protein source for the economically weaker section of people. The environment of almost all aquatic ecosystems has a specific influential role on or by fishes. Therefore, studying their stress biology, especially oxidative stress, is vital because it can influence their growth, production, reproduction, etc. To review the above topic, peer-reviewed electronic databases, including Web of Science, science direct, PubMed, Google Scholar, Scopus, and AGRICOLA, were searched with specific keywords associated with fish, oxidative stress, diseases, etc. The influence of abiotic stress, such as the effects of water dissolved oxygen, temperature, salinity, water hardness, alkalinity, pH, pollutants, heavy metals, and anthropogenic activities, was reviewed in the current article to draw a conclusion on the updated relation that exists between fish physiology, disease, and abiotic stressors. Oxidative stress and redox regulatory levels under the above parameters were reviewed as the stress or anti-stress responses differ in various fish models. Undoubtedly, the reviewed abiotic factors modulate fish oxidative health status to a greater extent, and therefore, these factors must be considered on a priority basis to improve the general health and immunity status of fish. The statement above remains valid in both saline and freshwater habitats.
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- 2023
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5. Hepatoprotective activity of the ethanolic extract of Morus indica roots from Indian Bodo tribes
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Hankhray Boro, Talambedu Usha, Dinesh Babu, Prakashmurthy Chandana, Arvind Kumar Goyal, Hemavathy Ekambaram, Hasan Soliman Yusufoglu, Sandeep Das, and Sushil Kumar Middha
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Morus indica L. ,Mulberry ,Polyphenols ,Hepatoprotective ,Glutathione metabolism ,Science ,Technology - Abstract
Abstract The roots of Morus species are well described in the Pharmacopoeia of the People's Republic of China (ChP) for its traditional use in treating liver fibrosis due to its hepatoprotective property. However, little is known about the hepatoprotective effect of the roots of Morus indica L. (RoMi), and the pharmacological mechanism(s) are uncertain due to its intricacy. Therefore, this study evaluates the hepatoprotective activity of the ethanolic extract of RoMi (eRoMi) against the CCl4-induced in-vivo animal model at different dosages (100 and 200 mg/kg BW) in comparison with silymarin as a positive control. The hepatoprotective activity of eRoMi was evaluated by measuring the levels of serum biomarkers, hepatic antioxidant enzymes and was verified by histological studies. Interestingly, 1,2-bis(trimethylsilyl) benzene, 1,4-phenylenebis (trimethylsilane), 2,4,6-cycloheptatriene-1-one, 3,5-bis-trimethylsilyl and α-amyrin were the active components found in eRoMi as detected by GC–MS. Oral administration of eRoMi (200 mg/kg BW) to rats significantly protected serum biochemical parameters (increased ALT, AST, LDH, bilirubin and GGT as well as depletion of antioxidant enzymes and hepatic GSH) and elevation in hepatic lipid peroxidation as compared to CCl4-treated rats. The hematological indices such as erythrocytes, hemoglobin, monocytes and lymphocytes were also normal in eRoMi-treated rats. The histopathological evaluation indicated a significant restoration of liver structure as compared to silymarin. This study is the first scientific validation for the traditional use of eRoMi to understand its hepatoprotective activity.
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- 2022
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6. Gas chromatography-mass spectrometry metabolic profiling, molecular simulation and dynamics of diverse phytochemicals of Punica granatum L. leaves against estrogen receptor
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Talambedu Usha, Sushil Kumar Middha, Dhivya Shanmugarajan, Dinesh Babu, Arvind Kumar Goyal, Hasan Soliman Yusufoglu, and Kora Rudraiah Sidhalinghamurthy
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breast cancer ,docking ,md simulations ,gcms/ms profiling ,natural compounds ,pomegranate ,estrogen receptor ,admet ,4-coumaric acid methyl ester ,Biochemistry ,QD415-436 ,Biology (General) ,QH301-705.5 - Abstract
Introduction: Breast cancer is the most common type of cancer globallyand its treatment with many FDA-approved synthetic drugs manifests various sideeffects. Alternatively, phytochemicals are natural reserves of novel drugsfor cancer therapy. Punica granatum commonly known as pomegranate is arich source of phytopharmaceuticals. Methods: The phytoconstituentsof Punica granatum leaves were profiled using GC-MS/MS in the presentwork. Cytoscape-assisted network pharmacology of principal and prognosticbiomarkers, which are immunohistochemically tested in breast cancer tissue, wascarried out for the identification of protein target. Followed by, rigorousvirtual screening of 145 phytoconstituents against the three ER isoforms(α, β and γ) was performed using Discovery Studio. Thedocked complexes were further evaluated for their flexibility and stability usingGROMACS2016 through 50 ns long molecular dynamic simulations. Results: In the current study, we report the precise and systematic GC-MS/MS profiling ofphytoconstituents (19 novel metabolites out of 145) of hydromethanolic extractof Punica granatum L. (pomegranate) leaves. These phytocompounds arevarious types of fatty acids, terpenes, heterocyclic compounds and flavonoids.4-coumaric acid methyl ester was identified as the best inhibitor of ER isoformswith drug-likeness and no toxicity from ADMET screening. γ-ligandbinding domain complex showed the best interactions with minimum RMSD, constantRg, and the maximum number of hydrogen bonds. Conclusion: We conclude that 4-coumaric acidmethyl ester exhibits favourable drug-like properties comparable to tamoxifen, anFDA-approved breast cancer drug and can be tested further in preclinical studies.
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- 2021
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7. Microbiomics and cloud-based analytics advance sustainable soil management
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Anupam J. Das, Renuka Ravinath, Budiyal Ramesh Shilpa, Bilgi Sampgod Rohith, Arvind Kumar Goyal, Nijalingappa Ramesh, Mothukapalli Krishnareddy Prasannakumar, Hemavathy Ekambaram, Talambedu Usha, and Sushil Kumar Middha
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microbiomics ,soil ,metagenomics ,dna ,sequencing ,review ,Biochemistry ,QD415-436 ,Biology (General) ,QH301-705.5 - Abstract
Soil constitutes a major component of the agro-ecosystem. Unrestrained uses of chemical pesticides and increased human activities have contributed to unprecedented changes in soil microflora affecting productivity. Modern microbiomics has proven to be an indispensable tool to understand the adaptations underlying complex soil microbial communities and their beneficial applications. In this review, we seek to emphasize the scope of microbiomics in enhancing soil productivity by providing an overview of the various sequencing platforms considering key parameters such as the accuracy, read lengths, reads per run, time involved and weighing out their pros and cons. The advances in modern ultra-high-throughput microbiomics platforms in combination with cloud-based analytics for in-depth exploration of soil-microbe associations can help achieve sustainable soil management contributing to better plant yield and productivity.
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- 2020
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8. Hybrid Assembly and Annotation of the Genome of the Indian Punica granatum, a Superfood
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Talambedu Usha, Sushil Kumar Middha, Dinesh Babu, Arvind Kumar Goyal, Anupam J. Das, Deepti Saini, Aditya Sarangi, Venkatesh Krishnamurthy, Mothukapalli Krishnareddy Prasannakumar, Deepak Kumar Saini, and Kora Rudraiah Sidhalinghamurthy
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Punica granatum (cultivar Bhagwa) ,flavonoids biosynthesis ,phenylpropanoid pathway ,whole genome ,oxford nanopore ,hybrid assembly ,Genetics ,QH426-470 - Abstract
The wonder fruit pomegranate (Punica granatum, family Lythraceae) is one of India’s economically important fruit crops that can grow in different agro-climatic conditions ranging from tropical to temperate regions. This study reports high-quality de novo draft hybrid genome assembly of diploid Punica cultivar “Bhagwa” and identifies its genomic features. This cultivar is most common among the farmers due to its high sustainability, glossy red color, soft seed, and nutraceutical properties with high market value. The draft genome assembly is about 361.76 Mb (N50 = 40 Mb), ∼9.0 Mb more than the genome size estimated by flow cytometry. The genome is 90.9% complete, and only 26.68% of the genome is occupied by transposable elements and has a relative abundance of 369.93 SSRs/Mb of the genome. A total of 30,803 proteins and their putative functions were predicted. Comparative whole-genome analysis revealed Eucalyptus grandis as the nearest neighbor. KEGG-KASS annotations indicated an abundance of genes involved in the biosynthesis of flavonoids, phenylpropanoids, and secondary metabolites, which are responsible for various medicinal properties of pomegranate, including anticancer, antihyperglycemic, antioxidant, and anti-inflammatory activities. The genome and gene annotations provide new insights into the pharmacological properties of the secondary metabolites synthesized in pomegranate. They will also serve as a valuable resource in mining biosynthetic pathways for key metabolites, novel genes, and variations associated with disease resistance, which can facilitate the breeding of new varieties with high yield and superior quality.
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- 2022
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9. Microbiome Analysis of the Rhizosphere from Wilt Infected Pomegranate Reveals Complex Adaptations in Fusarium—A Preliminary Study
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Anupam J. Das, Renuka Ravinath, Talambedu Usha, Biligi Sampgod Rohith, Hemavathy Ekambaram, Mothukapalli Krishnareddy Prasannakumar, Nijalingappa Ramesh, and Sushil Kumar Middha
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microbiomics ,soil metagenomics ,DNA sequencing ,wilt ,rot ,Punica granatum ,Agriculture (General) ,S1-972 - Abstract
Wilt disease affecting pomegranate crops results in rapid soil-nutrient depletion, reduced or complete loss in yield, and crop destruction. There are limited studies on the phytopathogen Fusarium oxysporum prevalence and associated genomic information with respect to Fusarium wilt in pomegranate. In this study, soil samples from the rhizosphere of different pomegranate plants showing early stage symptoms of wilt infection to an advanced stage were collected from an orchard situated in Karnataka, India. A whole metagenome sequencing approach was employed to gain insights into the adaptations of the causative pathogen F. oxysporum. Physicochemical results showed a drop in the pH levels, N, Fe, and Mn, and increase in electrical conductivity, B, Zn, Cl, Cu was observed in the early and intermediate stage samples. Comparative abundance analysis of the experimental samples ESI and ISI revealed an abundance of Proteobacteria phyla Achromobacter sp. 2789STDY5608625, Achromobacter sp. K91, and Achromobacter aegrifaciens and Eukaryota namely Aspergillus arachidicola, Aspergillus candidus, and Aspergillus campestris. Functional pathway predictions implied carbohydrate binding to be significant (p < 0.05) among the three experimental samples. Microbiological examination and whole microbiome analysis confirmed the prevalence of F. oxysporum in the soil samples. Variant analysis of F. oxysporum revealed multiple mutations in the 3IPD gene with high impact effects. 3-Isopropylmalate dehydratase and carbohydrate-active enzymes could be good targets for the development of antifungals that could aid in biocontrol of F. oxysporum. The present study demonstrates the capabilities of the whole metagenome sequencing approach for rapid identification of potential key players of wilt disease pathogenesis wherein the symptomatology is complex.
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- 2021
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10. Antidiabetic activity of giant grass Bambusa tulda
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Swarna Kamal Dey, Sushil Kumar Middha, Talambedu Usha, Birendra Kumar Brahma, and Arvind Kumar Goyal
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Bambusa tulda ,Diabetic ,Giant grass ,Therapeutics. Pharmacology ,RM1-950 - Published
- 2018
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11. In silico and in vivo based scientific evaluation of traditional anti-diabetic herb Hodgsonia heteroclita
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Talambedu Usha, Sushil Kumar Middha, Derhasat Narzary, Birendra Kumar Brahma, and Arvind Kumar Goyal
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Antidiabetic ,Hodgsonia heteroclite ,In silico ,Therapeutics. Pharmacology ,RM1-950 - Published
- 2017
12. Rosmarinic Acid, a New Polyphenol from Baccaurea ramiflora Lour. Leaf: A Probable Compound for Its Anti-Inflammatory Activity
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Talambedu Usha, Sushil Kumar Middha, Malay Bhattacharya, Prakash Lokesh, and Arvind Kumar Goyal
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Baccaurea ramiflora ,rosmarinic acid ,anti-inflammatory activity ,cytokines ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Despite several pharmacological applications of Baccaurea ramiflora Lour., studies on the influence of its polyphenol content on pharmacological activity such as anti-inflammatory properties have been scarce. Here we evaluated in vitro antioxidant activity, poyphenolics by HPLC and the anti-inflammatory potential of the methanolic leaf extract of Baccaurea ramiflora (BME) and its protective effects in carrageenan-induced paw edema model of inflammation in rats. The BME extract contained 79.06 ± 0.03 mg gallic acid equivalent (GAE)/g total polyphenols, 28.80 ± 0.01 mg quercetin equivalent (QE)/g flavonoid and 29.42 ± 0.01 μg cathechin equivalent/g proanthocyanidin respectively and rosmarinic acid (8 mg/kg) as a main component was identified by HPLC. Results demonstrate that administration of BME at the dose of 200 mg/kg can reduce paw edema by over 63%, and it exhibits a dose-response effect. Depending on concentration, the extract exerted scavenging activity on DPPH radical (IC50 36.4 μg/mL), significantly inhibited IL-1β (4.4 pg/mg protein) and TNF-α (0.21 ng/μg protein). Therefore, we conclude BME causes a substantial reduction of inflammation in in vivo models. We propose that rosmarinic acid and similar phenolic compounds may be useful in the therapy of inflammation-related injuries.
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- 2014
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13. HPLC Evaluation of Phenolic Profile, Nutritive Content, and Antioxidant Capacity of Extracts Obtained from Punica granatum Fruit Peel
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Sushil Kumar Middha, Talambedu Usha, and Veena Pande
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Therapeutics. Pharmacology ,RM1-950 - Abstract
This study revealed polyphenolic content, nutritive content, antioxidant activity, and phenolic profile of methanol and aqueous extracts of Punica granatum peel extract. For this, extracts were screened for possible antioxidant activities by free radical scavenging activity (DPPH), hydrogen peroxide scavenging activity and ferric-reducing antioxidant power (FRAP) assays. The total phenolics and flavonoid recovered by methanolic (MPE) and the water extract (AQPE) were ranged from 185 ± 12.45 to 298.00 ± 24.86 mg GAE (gallic acid equivalents)/gm and 23.05 ± 1.54 to 49.8 ± 2.14 quercetin (QE) mg/g, respectively. The EC50 of herbal extracts ranged from 100 µg/ml (0.38 quercetin equivalents), for AQPE, 168 µg/ml (0.80 quercetin equivalents), for MPE. The phenolic profile in the methanolic extracts was investigated by chromatographic (HPLC) method. About 5 different flavonoids, phenolic acids, and their derivatives including quercetin (1), rutin (2), gallic acid (3), ellagic acid (4), and punicalagin as a major ellagitannin (5) have been identified. Among both extracts, methanolic extract was the most effective. This report may be the first to show nutritive content and correlation analysis to suggest that phenols and flavonoids might contribute the high antioxidant activity of this fruit peel and establish it as a valuable natural antioxidant source applicable in the health food industry.
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- 2013
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14. Improved species level bacterial characterization from rhizosphere soil of wilt infected Punica granatum
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Das, Anupam J., Sarangi, Aditya Narayan, Ravinath, Renuka, Talambedu, Usha, Krishnareddy, Prasannakumar Muthukapalli, Nijalingappa, Ramesh, and Middha, Sushil Kumar
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- 2023
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15. Can Polyherbal Medicine be used for the Treatment of Diabetes? - A Review of Historical Classics, Research Evidence and Current Prevention Programs
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Arvind Kumar Goyal, Sudem Brahma, Prakash Dhamodhar, Mani Reema Kumari, S. Jayashree, Talambedu Usha, and Sushil Kumar Middha
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Endocrinology ,Endocrinology, Diabetes and Metabolism - Abstract
Abstract: Diabetes mellitus (DM), a chronic medical condition, has attained a global pandemic status over the last few decades affecting millions of people. Despite a variety of synthetic drugs available in the market, the use of herbal medicines for managing diabetes is gaining importance because of being comparatively safer. This article reviews the result of a substantial literature search on polyherbal formulations (PHFs) developed and evaluated with potential for DM. The accumulated data in the literature allowed us to enlist 83PHFs consisting of different parts of 147 plant species belonging to 58 botanical families. The documented plant species are laden with bioactive components with anti-diabetic properties and thus draw attention. The most favoured ingredient for PHFs was leaves of Gymnema sylvestre and seeds of Trigonellafoenum-graecum used in 29 and 27 formulations, respectively. Apart from herbs, shilajit (exudates from high mountain rocks) formed an important component of 9 PHFs, whereas calcined Mytilus margaritiferus and goat pancreas were used in Dolabi, the most commonly used tablet form of PHF in Indian markets. The healing properties of PHFs against diabetes have been examined in both pre-clinical studies and clinical trials. However, the mechanism(s) of action of PHFs are still unclear and considered the pitfalls inherent in understanding the benefits of PHFs. From the information available based on experimental systems, it could be concluded that plant-derived medicines will have a considerable role to play in the control of diabetes provided the challenges related to their bioavailability, bioefficacy, optimal dose, lack of characterization, ambiguous mechanism of action, and clinical efficiency are addressed.
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- 2023
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16. Targeted metagenome sequencing reveals the abundance of Planctomycetes and Bacteroidetes in the rhizosphere of pomegranate
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Renuka Ravinath, Anupam J. Das, Talambedu Usha, Nijalingappa Ramesh, and Sushil Kumar Middha
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Bacteroidetes ,Planctomycetes ,General Medicine ,Biochemistry ,Microbiology ,Pomegranate ,Planctomycetales ,Soil ,RNA, Ribosomal, 16S ,Rhizosphere ,Genetics ,Metagenome ,Molecular Biology ,Soil Microbiology - Abstract
Agricultural productivity of pomegranate can be enhanced by identifying the crop-associated microbial diversity in the rhizosphere region with respect to plant growth promoters and other beneficial organisms. Traditional culture methods have limitations in microbial screening as only 1-2% of these organisms can be cultured. In the present study, 16S rRNA amplicon-based metagenomics approach using MinION Oxford Nanopore platform was employed to explore the microbial diversity in the rhizosphere of pomegranate Bhagwa variety, across variable soil depths from 0 to 5 cms (R2), 5-10 cms (R4) and 10-15 cms (R6), using bulk soil as the control. Across all the three layers, significant variations in pH, nitrogen content and total fungal count were observed. 16S rRNA analysis showed the abundance of planctomycetes, Pirellula staleyi, followed by bacteroidetes, Flavisolibacter LC59 and Niastella koreensis across the various soil depths in the rhizospheric soil samples. Pathway prediction analysis indicated arginine and proline metabolism (gamma-glutamyl putrescine oxidase) and hydrogen sulfide biosynthesis as the most abundant pathway hits. Comparative abundance analysis across layers showed the R6 layer with the maximum microbial diversity in terms of highest dimension of variation (79.2%) followed by R4 and R2 layers (p 0.01). Our analysis shows the significant influence of root zone in shaping microbial diversity. This study has reported the presence of Planctomycetes, Pirellula staleyi for the first time in the pomegranate field.
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- 2022
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17. Baccaurea ramiflora Lour.: a comprehensive review from traditional usage to pharmacological evidence
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Sushil Kumar Middha, Arvind Kumar Goyal, and Talambedu Usha
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Baccaurea ramiflora ,Complementary and alternative medicine ,biology ,Traditional medicine ,Baccaurea ,Phytochemical ,Chemical constituents ,Anodyne ,biology.organism_classification ,Southeast asia - Abstract
Baccaurea ramiflora Lour. syn. Baccaurea sapida (Roxb.) Muell. Arg. widely known as Burmese grape is native to Southeast Asia. Its leaves, fruits, stem, bark, seeds forms an ingredient in many herbal prescriptions which have been used to treat jaundice, constipation, indigestion, cellulitis, as antidote for sanke venome, antiphlogistic and anodyne against rheumatoid arthritis etc. In the recent years, this plant has been largely explored on scientific grounds to identify the chemical constituents and pharmacological activities. The present review work is an effort to revisit the scientific works done to evaluate the scope for bioprospection of B. ramiflora. Based on the study designed, a number of research papers were reviewed, but only about 35 articles having information on B. ramiflora were evaluated in detail. In total, thirty compounds have been isolated and characterised so far from different parts of this evergreen tree, which accounts for its myriad medicinal value including analgesic, anthelmintic, antioxidant, anti-diarrheal, anti-inflammatory, cytotoxic, haemolytic, hypoglycemic, hypolipidemic, insecticidal, neuropharmacological, thrombocytic, anti-fungal and antimicrobial activities. This compilation of assorted information underpins the basic perceptive of B. ramiflora and opens up new horizon for further phytochemical evaluation, safety efficacy, and clinical trials.
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- 2020
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18. List of contributors
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Rupal Agnihotri, Lakshmi Jayasri Akkiraju, T. Anbarasan, Laura Margarita Artiga-Sainz, Dinesh Babu, Hemant Ramachandra Badwaik, Nikitha Bajare, Sugato Banerjee, Mahaly Baptiste, S. Nisar Basha, Alpana Bastikar, Virupaksha Bastikar, Amitava Basu, Sreenivas Reddy Bathula, Juan Sánchez-Verde Bilbao, Debasis Biswas, Hankhray Boro, Rakhi Chowdhury, Anjlina David, V.R. Devaraj, Hashimul Ehsan, Tripta Garg, Purvi Goel, Abhishek Goyal, Arvind Kumar Goyal, Pramodkumar Gupta, Sayan Dutta Gupta, Sudheer Gupta, Shoumi Haldar, Subhajit Hazra, Adrián Ibáñez-Navarro, Gen Kaneko, Raju Khan, Prashant Khare, Anand Krishnamurthy, Ashok Kumar, Avinash Kumar, Sanjeev Kumar, Leena Kumari, Ravita Kumari, Vijayalakshmi A. Lepakshi, Shivani Malviya, Bijina J. Mathew, Alisha Merchant, Sushil Kumar Middha, Ligi Milesh, Miguel Morante-Ruiz, Madhurima Nandy, Ram Kumar Nema, Cheol-Ho Pan, Prachurjya Panda, Subhamay Panda, Udwesh Panda, Vasundhara Pandita, Charu Pareek, Arpana Parihar, Dipesh Singh Parihar, Sonal Prasad, Tabish Qidwai, Manuel Quintana-Díaz, K. Ramesh Reddy, Pushpesh Ranjan, Guido Rodríguez de Lema-Tapetado, Mohd. Abubakar Sadique, Gaurav Sahu, Rohit Saluja, Amalendu Samanta, Marcos V.S. Santana, Antonio Sarria-Santamera, S.V. Satyanarayana, Dhivya Shanmugarajan, Busi Siddhardha, Floriano P. Silva-Jr, Tulasi Sindhuja, Anirudh K. Singh, Himadri Singh, Namami Singh, Dae-Geun Song, Aashna Srivastava, Pattnaik Subhaswaraj, P. Sucharitha, Shivani Sukhralia, Vidal H. Tania, Javeriya Tasneem, Talambedu Usha, Ashish Kumar Vyas, Neelam Yadav, Ritu Yadav, and Shalu Yadav
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- 2022
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19. Whole-Genome Sequencing of Plants: Past, Present, and Future
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Talambedu Usha, Prachurjya Panda, Arvind Kumar Goyal, Anusha A. Kukanur, Arunagiri Kamala, M. K. Prasannakumar, K. Sidhalinghamurthy, and Sushil Kumar Middha
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- 2022
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20. Databases, DrugBank, and virtual screening platforms for therapeutic development
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Sushil Kumar Middha, Anjlina David, Shoumi Haldar, Hankhray Boro, Prachurjya Panda, Nikitha Bajare, Ligi Milesh, V.R. Devaraj, and Talambedu Usha
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- 2022
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21. Prediction of drug–target interaction —a helping hand in drug repurposing
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Sushil Kumar Middha, Talambedu Usha, Shivani Sukhralia, Charu Pareek, Ritu Yadav, Rupal Agnihotri, Javeriya Tasneem, Arvind Kumar Goyal, and Dinesh Babu
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- 2022
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22. Hybrid Assembly and Annotation of the Genome of the Indian
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Talambedu, Usha, Sushil Kumar, Middha, Dinesh, Babu, Arvind Kumar, Goyal, Anupam J, Das, Deepti, Saini, Aditya, Sarangi, Venkatesh, Krishnamurthy, Mothukapalli Krishnareddy, Prasannakumar, Deepak Kumar, Saini, and Kora Rudraiah, Sidhalinghamurthy
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The wonder fruit pomegranate (
- Published
- 2021
23. Contributors
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Sarah Afreen, Kunal Ankola, R.L. Babu, Kamlesh Kumari Bajwa, Ramanuj Banerjee, Shivaleela Biradar, Manjunatha H. Boregowda, Shane Carrion, D.N. Das, Samreen Fatima, Minal Garg, Devlina Ghosh, Shanmugapriya Gnanasekaran, Arvind Kumar Goyal, P.S.P. Gupta, Zhihua Jiang, T. Karuthadurai, Alok Kumar, Dinesh Kumar, Satish Kumar, LikhithGowda Mahadevegowda, Dhruba Malakar, Hruda Nanda Malik, Tomas Melichar, Jennifer J. Michal, Sushil Kumar Middha, Sukanta Mondal, Nibedita Naha, S. Nandi, M. Naveen Kumar, Prachurjya Panda, H.P. Prashanth Kumar, I.J. Reddy, Raj S Reshma, Deepti Saini, Sikander Saini, Uzma Noor Shah, Shiv Shankar, Dhivya Shanmugarajan, Vishal Sharma, null Shikha, Pankaj Singh, Pradeep Kumar Singh, Ravindra Pratap Singh, Kshitij R.B. Singh, Shailja Singh, Rajat Pratap Singh, Ram Lakhan Singh, Neeraj Sinha, Xuelei Han, Shivani Sukhralia, Talambedu Usha, Songlei Xue, and Amy L. Zinski
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- 2021
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24. Deciphering the animal genomics using bioinformatics approaches
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Sushil Kumar Middha, Sarah Afreen, Shivani Sukhralia, Talambedu Usha, H P Prashanth Kumar, Arvind Kumar Goyal, Prachurjya Panda, and Dhivya Shanmugarajan
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education.field_of_study ,Resource (biology) ,business.industry ,Population ,Genomics ,Livestock ,Genome project ,Biology ,business ,education ,Productivity ,Genome ,Biotechnology - Abstract
Animal genomics is gaining popularity among researchers due to its utility-driven approaches. The major advantage lies in the understanding of how genes function and get expressed within various animal populations. Genomic understanding can propionate the thriving yield in farm animals to bioengineer innovative materials, enhanced productivity of livestock, xenotransplantation, and several other animal-based populous items for consumptions and even nonconsumption-based products like fabrics, silk. In this chapter, we present an introductory commentary on techniques and databases available to deduce animal genomes, a rapidly developing genome project resource, completed genomes summary of various domestic animals such as buffalo, sheep, and goat and the latest progress in the field. We have also flagged a concern with regard to resources and updates concerning farm livestock genome projects, especially in India, as compared to growing population and food demands across the globe within subsequent decades.
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- 2021
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25. Drug Repurposing Approaches: Existing Leads For Novel Threats And Drug Targets
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Sushil Kumar Middha, Talambedu Usha, Arvind Kumar Goyal, Sumedha A Kukanuri, Rachamadugu V Shravani, Mahantesh N Anupama, Anusha A Kukanur, Ameena Rahamath, and Nagasamudram Harshitha
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Drug ,Process (engineering) ,Drug discovery ,Computer science ,Phenotypic screening ,media_common.quotation_subject ,Psychological intervention ,Cell Biology ,General Medicine ,Biochemistry ,Drug repositioning ,Risk analysis (engineering) ,Risk process ,Molecular Biology ,Repurposing ,media_common - Abstract
Drug Repurposing (DR) is an alternative to the traditional drug discovery process. It is cost and time effective,with high returns and low-risk process that can tackle the increasing need for interventions for varied diseases and new outbreaks. Repurposing of old drugs for other diseases has gained wider attention, as there have been several old drugs approved by the FDA for new diseases. In the global emergency of COVID-19 pandemic, this is one of the strategies implemented in the repurposing of old anti-infective, anti-rheumatic and anti-thrombotic drugs. The goal of the current review is to elaborate the process of DR, its advantages, repurposed drugs for a plethora of disorders, and the evolution of related academic publications. Further, detailed are the computational approaches: literature mining and semantic inference, network-based drug repositioning, signature matching, retrospective clinical analysis, molecular docking and experimental phenotypic screening. We discuss the legal and economic potential barriers in DR, existent collaborative models and recommendations for overcoming these hurdles and leveraging the complete potential of DR in finding new indications.
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- 2020
26. Recent Updates on Computer-aided Drug Discovery: Time for a Paradigm Shift
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Chinaga Suresh Kumar, Talambedu Usha, Dhivya Shanmugarajan, Arvind Kumar Goyal, and Sushil Kumar Middha
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010405 organic chemistry ,business.industry ,Computer science ,Drug discovery ,General Medicine ,010402 general chemistry ,01 natural sciences ,Data science ,0104 chemical sciences ,Pharmaceutical Preparations ,Paradigm shift ,Drug Discovery ,Computer-aided ,Animals ,Computer-Aided Design ,Humans ,Structure based ,Pharmaceutical sciences ,Pharmacophore ,business ,Software ,Pharmaceutical industry - Abstract
Computer-Aided Drug Designing (CADD) has gained a wide popularity among biologists and chemists as a part of interdisciplinary drug discovery approach. It plays a vital role in the discovery, design and analysis of drugs in pharmaceutical industry. It is extensively used to reduce cost, time and speed up the early stage development of biologically new active molecules. In the current review we presented a brief review of CADD, merits and demerits, DNA, protein and enzyme as targets, types of CADD: Structure Based Drug Designing (SBDD), Ligand Based Drug Designing (LBDD), Pharmacophore based drug designing (PBDD) and Fragment Based Drug Designing (FBDD), theory behind the types of CADD and their applications. The review also focuses on the in-silico pharmokinetic, pharmacodynamic and toxicity filters or predictions that play a major role in identifying the drug like molecules. Currently in pharmaceutical sciences computational tools and software are exhibiting imperative role in the different stages of drug discovery hence the review throws light on various commercial and freeware available for each step of CADD.
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- 2018
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27. Morphological phylogeny among 15 accessions of bamboos growing in Kokrajhar district of the Bodoland Territorial Area Districts, Assam
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Sushil Kumar Middha, Talambedu Usha, Birendra Kumar Brahma, Samik Bhattacharya, Anusriti Basumatary, and Arvind Kumar Goyal
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0106 biological sciences ,0301 basic medicine ,Germplasm ,Bamboo ,Phylogenetic tree ,Ecology ,UPGMA ,Forestry ,Bambusa vulgaris ,Biology ,biology.organism_classification ,01 natural sciences ,Dendrocalamus ,03 medical and health sciences ,030104 developmental biology ,Genus ,Botany ,Clade ,010606 plant biology & botany - Abstract
Bamboo is nature’s wonderful gift historically associated with the rural population of the Bodoland Territorial Area Districts. However, indiscriminate use of the resource and the ambiguity in the identification of bamboos in the absence of flowering characters pose a potential risk to the bamboo germplasm. Therefore, we considered revising the taxonomic positions and phylogenetic relationships among 15 tropical bamboo species using 35 key morphological descriptors (MD) to assess the reliability of vegetative characters in identifying species. The phylogenetic tree constructed from the similarity matrix, derived from an unweighted pair group method of analysis (UPGMA) of the 35 MDs, marginally deviated from the conventional taxonomic positions of the bamboo species. While the two varieties, one forma of Bambusa vulgaris (var. Vittata, var. Vulgaris, fo. Waminii) and two species of the genus Dendrocalamus (D. giganteus and D. hamiltonii) clustered together in a single clade, and D. strictus was distantly placed from their congeners. This discrepancy with the conventional classification might have ensued since only vegetative characters such as culm anatomy, culm sheath, leaf, and leaf sheath were considered in the present study. While the phylogenetic relationship among the 15 tropical bamboos (computed from exhaustive MDs) grossly corroborate the conventional taxonomic grouping, a molecular-marker-based multidisciplinary approach should resolve the remaining conflicts in bamboo identification.
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- 2017
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28. Molecular Simulation-based Combinatorial Modeling and Antioxidant Activities of Zingiberaceae Family Rhizomes
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Arvind Kumar Goyal, Sushil Kumar Middha, K.R. Siddalinga Murthy, H P Prashanth Kumar, Neelu Joshi, Shanmugarajan Dhivya, Talambedu Usha, Sushen Pradhan, Bharat Chandra Basistha, Manoj Kumar Singh, and Saravanakumar Selvaraj
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0106 biological sciences ,0301 basic medicine ,DPPH ,Pharmaceutical Science ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Curcuma ,Zingiberaceae ,Drug Discovery ,Botany ,Phellandrene ,CADD ,cancer ,Gallic acid ,biology ,biology.organism_classification ,molecular dynamics ,030104 developmental biology ,chemistry ,Hedychium ,Curcuma angustifolia ,Original Article ,Sodium acetate ,010606 plant biology & botany ,Nuclear chemistry - Abstract
Objective: The main aim of this scientific report was to investigate a series of phytochemicals in silico and the pharmacology of four plants found at higher altitude in the ginger family, Zingiberaceae (incl. Costaceae) from North-East India, particularly Sikkim. First, the goal was to determine the biological activities of the four herbs (used under Zingiberaceae family) using antioxidant assays to identify the best species. Second, previously reported compounds in litero were subsequently screened for their anticancerous activities using in silico methods. Materials and Methods: Using the methanolic extracts of herbs, quantitative detection of phytochemicals such as total phenols and total flavonoids was detected, and the free radical scavenging activity was also studied using 2,2-diphenyl-1-picryl-hydrazyl (DPPH) assay. Docking process was studied, using Discovery Studio version 3.5, to identify suitable molecules at the protein-binding sites through annealing and genetic simulation algorithms. Grids centered on active sites were obtained with spacing of 54 × 55 × 56, and 0.503 grid spacing was calculated. The methods adopted and used in this study were comparisons of Global and Local Search Methods to determine the parameters such as maximum number of 250,000 energy evaluations as well as generations of 27,000, followed by mutation and crossover rates of 0.02 and 0.80. The number of docking runs was set to 10. Molecular dynamics study was done to check the stability of the complex. Results: Among all the genus of Zingiberaceae family investigated in this study, Curcuma angustifolia and Hedychium sp. exhibited the highest 537 ± 12.45; 292 ± 9.16 mg gallic acid equivalent/g total polyphenols and 38 ± 1.54; 75 ± 6.75 mg quercetin equivalent/g flavonoids, respectively. Depending on the concentration, the Hedychium sp. extract exerted the highest scavenging activity on DPPH radical (IC50 36.4 μg/mL). In silico result demonstrated that the synergetic effects of β-phellandrene with other compounds might be responsible for its anticancerous activity. β-phellandrene and farnesene epoxide showed bonding with Leu298, Ala302, Met336, Leu339, Leu343, Phe356, Ala302, Glu305, Met340, Leu343, Arg346, Phe356, Ile373, Ile376, Leu380, His475, Leu476, and Leu491. Conclusion: Based on the current available literature, this is the first study to understand the interaction of compounds found in the rhizomes of Zingiberaceae family. SUMMARY The aqueous methanolic extract of Zingiberaceae family Curcuma angustifolia and Hedychium sp. has potent antioxidant activity as assessed by 2,2-diphenyl-1-picryl-hydrazyl assaysHedychium sp. is understood to possess more active compounds than other varietiesIn silico studies indicated synergetic effects of β-phellandrene and other compounds for its anticancerous activity. Abbreviations used: CADD: Computer-aided drug designing; ROS: Reactive oxygen species; ADMET: Absorption, distribution, metabolism, and excretion-toxicity; FeCl3: Ferric chloride; DPPH: 2,2-diphenyl-1-picryl-hydrazyl; NaNO2: Sodium nitrite; TCA: Trichloroacetic acid; K2HPO4: Di-potassium hydrogen phosphate; H2O2: Hydrogen peroxide; KH2PO4: Potassium di-hydrogen phosphate, K2Fe (CN)6: Potassium ferricyanide; KOH: Potassium hydroxide; NaOH: Sodium hydroxide; Na2CO3: Sodium carbonate; CH3COONa: Sodium acetate; AlCl3: Aluminum chloride.
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- 2017
29. Pomegranate Peel and Its Anticancer Activity: A Mechanism-Based Review
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Kora Rudraiah Sidhalinghamurthy, Sushil Kumar Middha, and Talambedu Usha
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biology ,Traditional medicine ,business.industry ,medicine.medical_treatment ,Cancer ,Mechanism based ,Herbal therapy ,biology.organism_classification ,medicine.disease ,Clinical trial ,Radiation therapy ,Drug development ,Punica ,medicine ,Treatment procedure ,business - Abstract
Cancer is one of the prominent death causing diseases around the globe. About 1 in 6 deaths is due to cancer and its related diseases. Cancer mortality can be reduced by early diagnosis and screening, implementing effective treatments. A precise cancer identification is vital for effective treatment, because each cancer type requires a definite treatment procedure, such as radiotherapy, surgery, and chemotherapy. The brisk expansion of herbal therapy and escalating ongoing clinical studies are becoming trendy and useful in the drug development against cancer. Pomegranate (Punica granatum) is a prehistoric fruit with illustrious dietary and remedial properties in alternative traditional systems of medicine. The current chapter is aiming to understand various model systems (in silico, in vitro, and in vivo), employed for studying its anti-cancerous properties and diverse molecular effects exhibited by the pomegranate peel and its phytoconstituents. It also highlights the importance of secondary metabolites of P. granatum, especially ellagitannins and their anticancer properties. Although there are enormous in vitro and preclinical data, human clinical trials are sorely lacking. The major focus is on up-to-date investigations into the outcomes of previously reported pomegranate peel components against a diverse type of cancers.
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- 2020
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30. Incidence of synchronous sporadic flowering of four different species of bamboos in Kokrajhar District, BTAD, Assam, India
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null Arvind Kumar Goyal, null Derhasat Narzary, null Sushil Kumar Middha, and null Talambedu Usha
- Abstract
The successive generation continues in angiosperm through flowering. The parent plants of some of the members that belong to Poaceae family dies after flowering.A member of the subfamily Bambusoideae of Poaceae, bamboos, exhibit similar characteristics.In this paper, an attempt have been made to document the incidence of the flowering of bamboo in Kokrajhar district of BTAD, Assam.Four bamboo species viz. Bambusa assamica, Bambusa tulda, Dendrocalamus hamiltonii and Melocanna baccifera belonging to three different genera were recorded to flower sporadically during March-May 2015 at Chandrapara, Odlaguri, Baukhungri hills, Chandrapara respectively.All the recorded species were semelparous i.e. the life cycle of the plant ends with flowering. Thus if the flowering continues in the same frequency the time may come in near future when this invaluable natural resource might become endangered or even extinct. Thus, this is the need of the hour to apply biotechnological tools and develop protocols for propagation and conservation and thus, save this green gold from germplasm erosion
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- 2018
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31. Amelioration of antioxidant potential, toxicity, and antihyperglycemic activity of
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Sushil Kumar, Middha, Talambedu, Usha, Bharat Chandra, Basistha, and Arvind Kumar, Goyal
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Original Article - Abstract
Efficacy of several plant extracts in the clinical research for modulating oxidative stress correlated with diabetes mellitus (DM) is well documented. In the present study, we investigated the in vitro antioxidant activity, toxicity, and anti-diabetic activity of methanolic extract of Hippophae salicifolia leaves in normal and alloxan-induced diabetic wistar rats. H. salicifolia leaves were found to be rich in antioxidants. The acute toxicity test of methanolic extract of H. salicifolia leaves revealed that the median lethal dose (LD(50)) was found to be 3.92 g/kg body weight in mice. Administration of H. salicifolia leaves at 200 mg/kg and 400 mg/kg in alloxan-induced diabetic rats illustrated significant reduction (22% and 39%, respectively) in fasting blood glucose compared to diabetic control. Both the doses were found to be effective when compared to diabetic rats. The Hippophae-treated diabetic rats showed significant increase in the endogenous antioxidant enzymes, superoxide dismutase (50% and 74%, respectively), glutathione peroxidase (57% and 41%, respectively) and decrease in malondialdehyde (33% and 15%, respectively) levels. These results suggested that the methanolic leaf extract of H. salicifolia enhanced the antioxidant defence against reactive oxygen species produced under hyperglycaemic conditions. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s13205-019-1840-3) contains supplementary material, which is available to authorized users.
- Published
- 2019
32. In silico exploration of cyclooxygenase inhibitory activity of natural compounds found in Myrica nagi using LC-MS
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Prakash Lokesh, Arvind Kumar Goyal, Gulshan Wadhwa, Sushil Kumar Middha, Hoskote Panditharadhya Prashanth, Talambedu Usha, Raj Kamal, and Ankit Bhardwaj
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0301 basic medicine ,chemistry.chemical_classification ,biology ,In silico ,Active site ,AutoDock ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,Enzyme ,Biochemistry ,chemistry ,Docking (molecular) ,030220 oncology & carcinogenesis ,biology.protein ,Myricetin ,Cyclooxygenase ,General Agricultural and Biological Sciences ,Discovery Studio - Abstract
The process of inflammation is associated with several disorders such as cardiovascular disease, cancer and arthritis. Cyclooxygenase (COX) receptors play an important role in inflammation. COX-2 is an endogenous enzyme which catalyses and converts arachidonic acid to prostaglandins and thromboxanes. The prediction of the docking of small molecules at the active site, i.e. receptor binding site, and the projection of the binding affinity of the complex is a crucial part of computer-aided drug design. The current study evaluates the COX-2 inhibitory activity of compounds detected in Myrica nagi, an actinorhizal plant, using an in-silico approach. Liquid chromatography (LC-MS) studies of M. nagi leaf extract revealed the presence of 21 compounds. The known COX-2 inhibitor Celecoxib was used as reference. Silico docking studies were carried out using iGemdock and verified by discovery studio and autodock software. Three important parameters—binding energy, inhibition constant and intermolecular energy—were determined. The results showed that all selected compounds showed binding energies between −28.19 kcal/mol to −63.13 kcal/mol in iGEMDOCK. Myricetin (−63.13 kcal/mol) showed the best binding energy compared with the Celecoxib reference (−62.35 kcal/mol). Discovery studio and autodock also calculated the same patterns of binding energy. All selected compounds displayed COX inhibitory activity, probably due to their structural parameters. These molecular docking analyses may lead to the further development of potent COX inhibitors for the treatment of inflammation.
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- 2016
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33. Evaluation of antioxidative, analgesic and anti-inflammatory activities of methanolic extract of Myrica nagi leaves - an animal model approach
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Prakash Lokesh, Sushil Kumar Middha, Talambedu Usha, Arvind K. Misra, Arvind Kumar Goyal, and Dinesh Babu
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0301 basic medicine ,Traditional medicine ,medicine.drug_class ,DPPH ,Analgesic ,Mismatch negativity ,Biology ,biology.organism_classification ,behavioral disciplines and activities ,Median lethal dose ,Acute toxicity ,Anti-inflammatory ,Myricaceae ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,Diclofenac ,chemistry ,030220 oncology & carcinogenesis ,medicine ,General Agricultural and Biological Sciences ,medicine.drug - Abstract
Myrica nagi (family Myricaceae) is commonly known as Kathphal (Hindi) and Bayberry (English) and it has a long history of usage in traditional medicine. It is popular actinorhizal plant for its symbiotic relationship with Frankia. This study was taken in force to estimate the analgesic, anti-inflammatory and anti-oxidative activities of methanolic extract of Myrica nagi (MMN) in an animal model. Anti-oxidative property of MMN was assessed by free radical scavenging assay (DPPH method). The acute toxicity test of methanolic extract of MMN revealed that the median lethal dose (LD50) was found to be 2080 mg/kg body weight in mice. The anti-inflammatory property was evaluated by carrageenan-induced acute inflammation in rats by measuring rat paw volume at different time intervals and toxicological analysis using mice. The analgesic effect was measured in Wistar rats using the acetic acid-induced writhing test and MMN at 200 mg/kg BW showed 54.56 % inhibition of writhing. MMN showed higher anti-oxidant activity in DPPH assays as compared to standard. High dose of MMN showed a significant reduction (21.71 %) in inflammation after 4 h of treatment, which was comparable to diclofenac (10 mg/kg BW; 32.75 %)-treated group. Significant reduction (p < 0.05) in the levels of inflammatory cytokine (IL-1β and TNF-α) markers were also observed in serum of MMN-treated animals as compared to control. Taken together, the phenolic compounds of MMN may serve as potential herbal drug for amelioration of acute inflammation due to their modulatory action on free radicals.
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- 2016
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34. In vitro antioxidant profiling of Bambusa tulda Roxb. aqueous methanolic leaf extract growing in the forests of Kokrajhar district, BTAD, Assam, India
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null Arvind Kumar Goyal, null Swarna Kamal Dey, null Sushil Kumar Middha, null Talambedu Usha, and null , Birendra Kumar Brahma
- Abstract
Background: From an age-old period bamboo has been an important ingredient of traditional Asian medicines ingeneral and Chinese medicine in particular. Today people are searching over the use of herbal medicine instead of thesynthetic drugs. Objective: The aim of this study was to evaluate phytochemical, biochemical constituent and invitro antioxidant activity of aqueous methanolic leaf extract of Bambusa tulda. Bambusa tulda (Poaceae) is widelydistributed in North Eastern parts of the Country. Methodology: Phytochemical constituents of leaves were extractedby hot extraction method. Aqueous methanolic extract showed that the presence of phenolic compound, alkaloids,saponnins, flavonoids, steroids, anthraquinones, glycosides. The total phenolic, flavonoid and flavonol content in theaqueous methanolic extract were determined by calorimetric assay as well as their antioxidant activity throughvarious chemical assays like DPPH radicals, hydrogen peroxide scavenging and reducing power assay. Results: Thetotal phenolic, flavonoids and flavonol content in aqueous methanolic extract were 17.494±0.01 mg GAE/g,176.35±0.03 mg QE /g and 96.2±0.01 mg QE /g respectively. Conclusion: This may be first report to provideevidence that the crude aqueous metanolic extract of Bambusa tulda leaf is a potential source of natural antioxidant.
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- 2015
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35. Identification of Anti-Cancer Targets of Eco-Friendly Waste Punica granatum Peel by Dual Reverse Virtual Screening and Binding Analysis
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Veena Pande, Syed Lubna, Talambedu Usha, Sushil Kumar Middha, H.P. Prashanth, T. Madhan Mohan, and Arvind Kumar Goyal
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Premature aging ,Cancer Research ,Epidemiology ,Antineoplastic Agents ,chemistry.chemical_compound ,Pseudopelletierine ,Alkaloids ,Glucosides ,Piperidines ,Neoplasms ,Drug Discovery ,Humans ,Medicine ,Computer Simulation ,Molecular Targeted Therapy ,Flavonoids ,Lythraceae ,Virtual screening ,biology ,Traditional medicine ,business.industry ,Public Health, Environmental and Occupational Health ,AutoDock ,biology.organism_classification ,Hydrolyzable Tannins ,Molecular Docking Simulation ,Oncology ,chemistry ,Docking (molecular) ,Fruit ,Punica ,Quercetin ,business ,Tannins ,Corilagin ,Discovery Studio - Abstract
Background: Punica granatum (family: Lythraceae) is mainly found in Iran, which is considered to be its primary centre of origin. Studies on pomegranate peel have revealed antioxidant, anti-inflammatory, antiangiogenesis activities, with prevention of premature aging and reducing inflammation. In addition to this it is also useful in treating various diseases like diabetes, maintaining blood pressure and treatment of neoplasms such as prostate and breast cancer. Objectives: In this study we identified anti-cancer targets of active compounds like corilagin (tannins), quercetin (flavonoids) and pseudopelletierine (alkaloids) present in pomegranate peel by employing dual reverse screening and binding analysis. Materials and Methods: The potent targets of the pomegranate peel were annotated by the PharmMapper and ReverseScreen 3D, then compared with targets identified from different Bioassay databases (NPACT and HIT’s). Docking was then further employed using AutoDock pyrx and validated through discovery studio for studying molecular interactions. Results: A number of potent anti-cancerous targets were attained from the PharmMapper server according to their fit score and from ReverseScreen 3D server according to decreasing 3D scores. Conclusion: The identified targets now need to be further validated through in vitro and in vivo studies.
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- 2015
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36. A study of comparative modelling, simulation and molecular dynamics of CXCR3 receptor with lipid bilayer
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Sushil Kumar Middha, Vijayakumar Bommuraj, Meena Chandran, Shanmugarajan Dhivya, Rethavathi Janarthanam, Chinaga Suresh Kumar, and Talambedu Usha
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0301 basic medicine ,Chemokine ,Receptors, CXCR3 ,Cell ,Lipid Bilayers ,Molecular Conformation ,Molecular Dynamics Simulation ,CXCR3 ,03 medical and health sciences ,Molecular dynamics ,0302 clinical medicine ,Structural Biology ,medicine ,Humans ,Lipid bilayer ,Receptor ,Molecular Biology ,biology ,General Medicine ,Toggle switch ,Molecular Docking Simulation ,030104 developmental biology ,medicine.anatomical_structure ,Biochemistry ,030220 oncology & carcinogenesis ,biology.protein ,Biophysics - Abstract
The G-coupled receptors seen on the cell surface are composites with a lipid bilayer. The chemokines are kind of G-coupled receptor which majorly involved in the activation and downstream signalling of the cell. In general, many G-coupled receptors lack their 3D structures which become a hurdle in the drug designing process. In this study, comparative modelling of the CXCR3 receptor was carried out, structure evaluation was done using various tools and softwares. Additionally, molecular dynamics and docking were performed to prove the structural quality and architecture. Interestingly, the studies like toggle switch mechanism, lipid dynamics, virtual screening were carried out to find the potent antagonist for the CXCR3 receptor. During virtual screening 14,303 similar molecules were retrieved among them only four compounds have an ability to interact with a crucial amino acid residue of an antagonist. Hence, these screened compounds can serve as a drug candidate for a CXCR3 receptor, but further in vitro and in vivo studies are ought to do to prove its same efficacy.
- Published
- 2017
37. Bamboo shoots as a nutritive boon for Northeast India: an overview
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Anusriti Basumatary, Sushil Kumar Middha, Birendra Kumar Brahma, Talambedu Usha, Arvind Kumar Goyal, and Amit Kumar Basumatary
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0301 basic medicine ,Bamboo ,030109 nutrition & dietetics ,business.industry ,Agroforestry ,fungi ,Environmental Science (miscellaneous) ,Biology ,medicine.disease ,Agricultural and Biological Sciences (miscellaneous) ,Bamboo shoot ,Biotechnology ,03 medical and health sciences ,Malnutrition ,0302 clinical medicine ,Nutraceutical ,Nutrient ,Agriculture ,Shoot ,medicine ,Original Article ,030212 general & internal medicine ,Sugar ,business - Abstract
With about 136 species, India is one among the richest countries in bamboo resources that help mankind in more than 1500 diverse ways. Although the utilization of juvenile shoots of bamboo in tribal diet of Northeast India is a very old observable fact, its numerous health benefits and potentiality remains uncharted. Apart from being delicious, the bamboo shoots are also rich in minerals and nutrient components such as carbohydrates, proteins, fiber and are low in fat and sugar which could be helpful in mitigating the problem of malnutrition. Few studies also revealed the health benefits of bamboo shoots for the treatment of cancer and cardiovascular diseases, weight loss and to improve digestion. Over and above the nutritional values of different species of bamboo shoots, the increasing inclinations towards health awareness among the consumers have emphasized its utilization in modern diet as a health food for boosting the nutritional security. Thus, in the present review, the nutraceutical potentiality of bamboo shoots is explored alongside its various qualities.
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- 2017
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38. Analysis of toxic, antidiabetic and antioxidant potential of Bambusa balcooa Roxb. leaf extracts in alloxan-induced diabetic rats
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Talambedu Usha, Sushil Kumar Middha, Arnab Sen, and Arvind Kumar Goyal
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0301 basic medicine ,Antioxidant ,medicine.medical_treatment ,Environmental Science (miscellaneous) ,Median lethal dose ,Glibenclamide ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Alloxan ,Diabetes mellitus ,medicine ,Bambusa balcooa ,chemistry.chemical_classification ,biology ,Traditional medicine ,Glutathione peroxidase ,biology.organism_classification ,medicine.disease ,Agricultural and Biological Sciences (miscellaneous) ,Acute toxicity ,030104 developmental biology ,Biochemistry ,chemistry ,030220 oncology & carcinogenesis ,Original Article ,Biotechnology ,medicine.drug - Abstract
Bambusa balcooa (Poaceae) is native to India and has been used traditionally by the tribes of Northeast India to treat diabetes. The present investigation was aimed to evaluate the toxicity, anti-diabetic activity along with in vitro antioxidant activity of the leaf of B. balcooa in alloxan-induced diabetic rats and also identify active compounds by using HPLC. The acute toxicity test of aqueous extract of B. balcooa leaf revealed that the median lethal dose (LD50) of B. balcooa aqueous extract (BAQE) was 5.18 g/kg body weight in mice. Administration of BAQE at 100 and 200 mg/kg in alloxan-induced diabetic rats showed significant reduction in fasting blood glucose and glycated hemoglobin while plasma insulin level was elevated compared to diabetic control. Both the doses were effective when compared to diabetic glibenclamide rats. The BAQE treated diabetic rats showed significant increase in the endogenous antioxidant enzymes superoxide dismutase, glutathione peroxidase and decrease in malondialdehyde levels. HPLC analysis of BAQE showed the presence of rutin, gallic acid and β sitosterol. Thus, it can be inferred from this study that BAQE possess antidiabetic and in vivo antioxidant activity. The overall activity might be possibly due to the presence of potential antioxidants.
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- 2017
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39. In silico and in vivo based scientific evaluation of traditional anti-diabetic herb Hodgsonia heteroclita
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Derhasat Narzary, Birendra Kumar Brahma, Arvind Kumar Goyal, Sushil Kumar Middha, and Talambedu Usha
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Pharmacology ,food.ingredient ,In silico ,lcsh:RM1-950 ,Biology ,anti-diabetic ,food ,Hodgsonia heteroclite ,lcsh:Therapeutics. Pharmacology ,Antidiabetic ,In vivo ,Herb ,Hodgsonia heteroclita - Abstract
No abstract
- Published
- 2017
40. Molecular Docking and Quantum Mechanical Studies on Pelargonidin-3-Glucoside as Renoprotective ACE Inhibitor
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Pranav Tripathi, Sushil Kumar Middha, Talambedu Usha, and Veena Pande
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Drug ,Article Subject ,biology ,business.industry ,media_common.quotation_subject ,Angiotensin-converting enzyme ,AutoDock ,Pharmacology ,medicine.disease ,Nephropathy ,Docking (molecular) ,Diabetes mellitus ,ACE inhibitor ,medicine ,biology.protein ,Perindopril ,business ,media_common ,medicine.drug - Abstract
Background and Aim. Despite tangible progress in recent years, substantial therapeutic challenges remain unexplored in nephropathy, particularly in diabetic patient. Addressing these challenges requires identification of novel drugs and development of noninvasive and cost-effective methods to select the most appropriate therapeutic option for the disease. Angiopathic nephropathy is one of the complications of diabetes mellitus and is becoming the single most important reason for end-stage renal disease in the western world. This study has investigated the inhibitory effect of a library naturally occurring nonprotein compounds that inhibit angiotensin converting enzyme (ACE). Materials and Methods. Docking studies of ACE protein with natural compounds and synthetic commercial drug perindopril were done using AutoDock, FlexX, and Hex. Toxicity predictions were carried out using OpenTox. Quantum mechanical properties were studied using GAMESS. Results. Pelargonidin-3-glucoside could be used as a potent renoprotective drug candidate, which inhibits ACEII. It has low toxicity and its quantum mechanical properties are comparable to those of commercial drugs.
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- 2013
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41. Toxicological Evaluation of Emblica officinalis Fruit Extract and its Anti-inflammatory and Free Radical Scavenging Properties
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Prakash Lokesh, Sushil Kumar Middha, Talambedu Usha, Deepthi Sudhir Keni, Varsha Yardi, Dinesh Babu, Arvind Kumar Goyal, and Lavanya Mojamdar
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Antioxidant ,ABTS ,antioxidant ,Traditional medicine ,high performance liquid chromatography ,DPPH ,medicine.medical_treatment ,Pharmaceutical Science ,Lipid peroxidation ,acute inflammation ,chemistry.chemical_compound ,Rutin ,chemistry ,Biochemistry ,amla ,Drug Discovery ,medicine ,Original Article ,Gallic acid ,Emblica officinalis ,Quercetin ,1-diphenyl-2-picrylhydrazyl ,Ellagic acid - Abstract
Background: Emblica officinalis (Euphorbiaceae), popularly known as Indian gooseberry or “Amla” in India, is used in Ayurveda as “rejuvenating herb” since ancient times. Objective: This study was carried out to estimate toxicity, anti-inflammatory, and antioxidative activities of the methanolic extract of Emblica officinalis fruit (MEO) in an animal model. Materials and Methods: Antioxidative property of MEO was assessed by in vitro assays such as phosphomolybdenum assay (total antioxidant capacity), free radical scavenging assays 1,1-diphenyl-2-picrylhydrazyl and 2,2’-azino-bis and 3-ethylbenzthiazoline-6-sulphonic acid (DPPH and ABTS method) and lipid peroxidation assay (LPO). The anti-inflammatory property was evaluated by carrageenan-induced acute inflammation in rats by measuring rat paw volume at different time intervals and toxicological analysis using mice. Results and Discussion: High performance liquid chromatography studies revealed the presence of gallic acid (2.10%), mucic acid (4.90%), ellagic acid (2.10%), quercetin (28.00%), rutin (3.89%), and β-glucogallin (1.46%). MEO showed highest antioxidant activities by using DPPH (17.33–89.00%), ABTS (23.03–94.16%), nitric oxide scavenging activity (12.94–70.16%), LPO (56.54%), and phosphomolybdenum assay (142 ± 6.09 μg/ml). The LD50 was found to be approximately 1125 mg/kg (p.o). High dose of MEO showed significant reduction (72.71%) in the inflammation after 4 h of treatment, which was comparable to diclofenac (10 mg/kg) (61.57%) treated group. Significant reduction (P < 0.05) in the inflammatory cytokine (interleukin-1β and tumor necrosis factor-α) markers were also observed (57.25% and 35.41%, respectively) in serum of MEO treated animals as compared to control. Conclusion: Taken together, phenolic compounds of MEO may serve as a potential herbal drug for amelioration of acute inflammation due to their modulatory action on free radicals. SUMMARY The methanolic extract of Emblica officinalis fruit (MEO) has potent antioxidant activity as assessed by DPPH, ABTS and LPO assaysMEO has potent anti-inflammatory activity in carrageenan induced paw edema modelThe phenolic compounds of MEO might be a potential herbal drug for amelioration of acute inflammation. Abbreviations used: ROS, reactive oxygen species; RNS, reactive nitrogen species, LPO, lipid peroxidation, NO, nitric oxide, IL, interleukin; TNF α tumor necrosis factor alpha; NSAIDs, nonsteroidal anti inflammatory drugs; AA, ascorbic acid; MEO, methanolic extract of Emblica officinalis fruit; ABTS+; 2,2’ azino bis 3 ethylbenzthiazoline 6 sulphonic acid; DPPH, 1,1 diphenyl 2 picrylhydrazyl; HPLC, high performance liquid chromatography; MDA, malondialdehyde; DMSO, dimethyl sulphoxide; ELISA, enzyme linked immunosorbent assay.
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- 2016
42. An In vitro studies on indigenous ayurvedic plants, having hypoglycemic activity
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Sushil Kumar Middha, Pranav Tripathi, Veena Pande, Kirti Yashwant Marathe, Yogini Pradeep Masurkar, Tarun Jain, Talambedu Usha, and Bhargavi Bhatt
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Microbiology (medical) ,Indigenous plants ,Emblica officinalis ,Trigonella ,lcsh:Arctic medicine. Tropical medicine ,Traditional medicine ,biology ,Momordica ,business.industry ,lcsh:RC955-962 ,Diabetes ,lcsh:R ,lcsh:Medicine ,biology.organism_classification ,In vitro ,Moringa ,Infectious Diseases ,Syzygium ,Punica ,hypoglycemic activity ,Medicine ,Glucose oxidase ,business ,Inhibitory effect - Abstract
Objective Finding a cure for diseases and infections using herbal medicines are as old as mankind. The present study aimed at investigation of anti-hyperglycemic potential of methanolic extract of some indigenous ayurvedic plants used in Karnataka. Design setting There are a few explicit studies to confirm invitro hypoglycemic activity. Our work is based on the study of some indigenous plants which show inhibitory effect on glucose oxidase and are in use as hypoglycemic agents in traditional system of medicine. Result Syzygium cumini , Trigonella foenum graecum seed , Moringa alba leaf , Punica granatum peel , Emblica officinalis and Momordica charantia possessed highest hypoglycemic activity of varying degree. S. cumini and T. foenum had shown the better activity in neutral and basic media than others. Whereas, Alterathera ficoicka leaf, T. foenum and Momordica charantia have shown prominent result in acidic media. The result in three different media revealed that, acidic medium shows less prominent hypoglycemic activity as compared to neutral and basic medium. Conclusion S. cumin, T. foenum seed and M. charantia gave the impression of being prominent candidates for drug targets for diabetes. This may be the first report using invitro approach to prove their antidiabetic properties.
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- 2012
43. Influence of Punica granatum L. on region specific responses in rat brain during Alloxan-Induced diabetes
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Sushil Kumar Middha, Talambedu Usha, and Tekupalli Ravikiran
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Antioxidant ,business.industry ,medicine.medical_treatment ,Blood sugar ,Pharmacology ,medicine.disease ,medicine.disease_cause ,Malondialdehyde ,Protein oxidation ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Lipid peroxidation ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Alloxan ,Diabetes mellitus ,Medicine ,business ,Oxidative stress - Abstract
Objective The present study was carried out to investigate the effects of Punica granatum peel methanolic extract ( PGPE ) on cerebral cortex (CC) and Hippocampus (HC) brain antioxidant defense system and markers of lipid and protein oxidation in alloxan induced diabetic rats. Methods Oral administration of PGPE (75 and 150 mg of kg body weight) for 45 days resulted in significant reduction in blood glucose levels. Results Supplementation of diabetic rats with PGPE showed increased activities of SOD and GPx with concomitant decrease in MDA and PC content. Region-specific changes were more evident in the HC when compared to CC. Conclusions The present study indicated that PGPE can ameliorate brain oxidative stress in alloxan induced diabetic rats by up regulating antioxidant defense mechanism by attenuating lipid and protein oxidation. PGPE thus may be used as a potential therapeutic agent in preventing diabetic complications in the brain.
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- 2012
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44. An in vitro new vista to identify hypoglycemic activity
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null Sushil Kumar Middha and null Talambedu Usha
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Objective & Methodology: The present study aimed to detect a novel in-vitro method for some of indigenous plantextracts which demonstrate inhibitory effect to glucose oxidase and are in use of our traditional remedial system forhypoglycemic impending.Result: Bambusa vulgaris possessed hypoglycemic activity of varying degree. Dendrocalamus hamiltonii,Dendrocalamus sikkimensis had shown the better activity in neutral and basic media than others. Whereas, Bambusabalcooa and Bambusa pallida showed prominent result in acidic media. The result in three different media revealedthat, acidic medium had less prominent hypoglycemic activity as compared to neutral and basic medium. Conclusion: This may be the first report for using glucose oxidase as in vitro method to prove their antidiabeticproperties, can save a hugh preclinical burden for the budding herbal products.
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- 2012
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45. In silico-based combinatorial pharmacophore modelling and docking studies of GSK-3β and GK inhibitors of Hippophae
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Bharat Chandra Basistha, Sushil Kumar Middha, Arvind Kumar Goyal, Talambedu Usha, Nethramurthy Sanghamitra, and Syed Ahmed Faizan
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In silico ,Ascorbic Acid ,Biology ,Xanthophylls ,Molecular Docking Simulation ,General Biochemistry, Genetics and Molecular Biology ,Glycogen Synthase Kinase 3 ,Glucosides ,Zeaxanthins ,Catalytic Domain ,Drug Discovery ,Glucokinase ,Hippophae ,Hypoglycemic Agents ,Enzyme Inhibitors ,Glycogen Synthase Kinase 3 beta ,Drug discovery ,Lutein ,General Medicine ,Ascorbic acid ,Kinetics ,Biochemistry ,Docking (molecular) ,Thermodynamics ,Pharmacophore ,General Agricultural and Biological Sciences ,Databases, Chemical ,Discovery Studio ,Protein Binding - Abstract
Type 2 diabetes is an inevitably progressive disease, with irreversible beta cell failure. Glycogen synthase kinase and Glukokinase, two important enzymes with diverse biological actions in carbohydrate metabolism, are promising targets for developing novel antidiabetic drugs. A combinatorial structure-based molecular docking and pharmacophore modelling study was performed with the compounds of Hippophae salicifolia and H. rhamnoides as inhibitors. Docking with Discovery Studio 3.5 revealed that two compounds from H. salicifolia, viz Lutein D and an analogue of Zeaxanthin, and two compounds from H. rhamnoides, viz Isorhamnetin-3-rhamnoside and Isorhamnetin-7-glucoside, bind significantly to the GSK-3 beta receptor and play a role in its inhibition; whereas in the case of Glucokinase, only one compound from both the plants, i.e. vitamin C, had good binding characteristics capable of activation. The results help to understand the type of interactions that occur between the ligands and the receptors. Toxicity predictions revealed that none of the compounds had hepatotoxic effects and had good absorption as well as solubility characteristics. The compounds did not possess plasma protein-binding, crossing blood-brain barrier ability. Further, in vivo and in vitro studies need to be performed to prove that these compounds can be used effectively as antidiabetic drugs.
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- 2013
46. A Review on Antihyperglycemic and Antihepatoprotective Activity of Eco-Friendly Punica granatum Peel Waste
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Sushil Kumar Middha, Veena Pande, and Talambedu Usha
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Stem bark ,biology ,Traditional medicine ,business.industry ,Review Article ,lcsh:Other systems of medicine ,biology.organism_classification ,lcsh:RZ201-999 ,Environmentally friendly ,Complementary and alternative medicine ,Phytochemical ,visual_art ,Punica ,visual_art.visual_art_medium ,Medicine ,Bark ,business - Abstract
Over the past decade, pomegranate (Punica granatum) is entitled as a wonder fruit because of its voluminous pharmacological properties. In 1830,P. granatumfruit was first recognized in United States Pharmacopeia; the Philadelphia edition introduced the rind of the fruit, the New York edition the bark of the root and further 1890 edition the stem bark was introduced. There are significant efforts and progress made in establishing the pharmacological mechanisms of peel (pericarp or rind) and the individual constituents responsible for them. This review provides an insight on the phytochemical components that contribute too antihyperglycemic, hepatoprotective, antihyperlipidemic effect, and numerous other effects of wonderful, economic, and eco-friendly pomegranate peel extract (PP).
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- 2013
47. Bamboo-infoline: A database for North Bengal Bamboos
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Arnab Sen, Sushil Kumar Middha, Madhugiri Bhojangarao Nagaveni, Asim K. Bothra, Subhojyoti Chatterjee, Arvind Kumar Goyal, and Talambedu Usha
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HTML ,MeSH ,Pubmed ,Green gold ,Bamboo ,Database ,General Medicine ,Biology ,computer.software_genre ,Real time ,Tissue culture ,NCBI ,Chemical constituents ,BENGAL ,North Bengal ,computer - Abstract
UNLABELLED Bamboo, the "Green Gold", included in the non-timber forest products has both ecological and economic importance. Here is an attempt to describe a database named "Bambooinfoline" , which provides enumeration of the different species of bamboos found in North Bengal, with special emphasis on taxonomy, edible properties, chemical constituents, morphological features along with tissue culture specifications, which in turn benefits of scientific community. AVAILABILITY The database is freely available at http://www.bamboodb.ind.in/
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- 2010
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48. Molecular docking studies of anti-cancerous candidates in Hippophae rhamnoides and Hippophae salicifolia
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DA Manoj, Peyush Goyal, Syed Ahmed Faizan, Arvind Kumar Goyal, Talambedu Usha, Sushil Kumar Middha, Mahesh Karthik, Veena Pande, and H.P. Prashanth
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food.ingredient ,H. rhamnoides ,General Biochemistry, Genetics and Molecular Biology ,chemistry.chemical_compound ,food ,In vivo ,Hippophae ,cancer ,Medicine ,H. salicifolia ,ADME ,Traditional medicine ,biology ,business.industry ,Discovery Studio 3.5 ,Hippophae rhamnoides ,General Medicine ,AutoDock ,H-Ras ,biology.organism_classification ,Zeaxanthin ,chemistry ,Biochemistry ,Docking (molecular) ,docking ,Research-Article ,business ,Discovery Studio - Abstract
Actinorhizal plants contain numerous antioxidants that may play a crucial role in preventing the formation of tumors. H-Ras p21, a member of the Ras-GTPase family, is a promising target to treat various kinds of cancers. An in silico docking study was carried out to identify the inhibitory potential of compounds of these plants against H-Ras by using Discovery Studio 3.5 and by using Autodock 4.2. Docking studies revealed that four compounds, isorhamnetin-7-rhamnoside, quercetin-3-glucoside-7-rhamnoside (present in H. rhamnoides), zeaxanthin, and translutein (present in H. salicifolia) significantly bind with binding energies −17.1534, −14.7936, −10.2105 and −17.2217 Kcal/mol, respectively, even though they slightly deviate from Lipinski's rule. Absorption, distribution, metabolism, excretion and toxicity (ADME/tox) analyses of these compounds and their stereoisomers showed that they were less toxic and non-mutagenic. Amongst them, isorhamntein-7-rhamnoside showed hepatotoxicity. Hence, these compounds can be further investigated in vivo to optimize their formulation and concentration and to develop potential chemical entities for the prevention and treatment of cancers.
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- 2014
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49. An updated version of Phytomellitus Database
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null Talambedu Usha, null Lakshminarayan Akshya, null Sanjay Kundu, null Radhika K Nair, null Ibnul Hussain, and null Sushil Kumar Middha
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BACKGROUND: Keeping adverse effects ofantidiabetic drugs in mind scientists have nowdiverted towards identification of plant basednovel drugs with more potential and lesser sideeffects which in turn will reduce economic andclinical toll of Diabetes. OBJECTIVE:Upgradation of Phytomellitus databaseincludes introductory details of Diabetesmellitus and its future statistical aspect,alongwith details of Ayurvedic world or itstraditional medicines. It also give option ofHome, Types, Diabetes Dictionary, DiabetesMining, Diabetes Drug, Diabetes Quiz,Diabetes FAQ’s on the top of Home Page andoptions like Copyright, Terms of Use,Contributors, Contact Us in the bottom of thepage. METHODOLOGY: Methodologyremains same as per author’s previousmanuscripts1,2. RESULTS: Up-gradation wasneeded to maintain and incorporate new dataand chemical composition of the plantsincluding their structural views. Older versionof the phytomellitus includes 31% were wholeplants, 26% leaves, 11% seeds, 10% roots, and9% fruits from the collected data1. New versionincludes more than 250 number ofethanobotanical information than the previousone. In upgraded version chemical structures ofthe plants with their IUPAC nomenclatureauthor have incorporated.
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- 2013
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50. Identification of membrane associated drug targets in Borrelia burgdorferi ZS7- subtractive genomics approach
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Madagi, Shivkumar, primary, Patil, Vijayakumari Mali, additional, Sadegh, Saremy, additional, Singh, Abhishek Kumar, additional, Garwal, Bhavana, additional, Banerjee, Atreyi, additional, Talambedu, Usha Talambedu, additional, and Bhattacharjee, Biplab, additional
- Published
- 2011
- Full Text
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