117 results on '"TRANSGENE SA"'
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2. Invited Lecture: Human Treg clones as tools to study the biology of regulatory T lymphocytes.
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UCL - SSS/DDUV - Institut de Duve, Lucas, Sophie, Seminar at Transgene SA, UCL - SSS/DDUV - Institut de Duve, Lucas, Sophie, and Seminar at Transgene SA
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- 2009
3. Safety and immunogenicity of the therapeutic vaccine TG1050 in chronic hepatitis B patients: a phase 1b placebo-controlled trial
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Fabien Zoulim, Kaïdre Bendjama, Carla S. Coffin, Geneviève Inchauspé, Bérangère Bastien, Martin F. Sprinzl, Céline Halluard, Maud Brandely, Vincent Leroy, Ansgar W. Lohse, Heiner Wedemeyer, Mang Ma, François Habersetzer, Claire Fournier, Robert Thimme, Stanislas Pol, Perrine Martin, Karine Lugardon, N. Adda, Benoit Sansas, univOAK, Archive ouverte, Hôpital de la Croix-Rousse [CHU - HCL], Hospices Civils de Lyon (HCL), Centre Hospitalier de l'Université de Montréal (CHUM), Université de Montréal (UdeM), CHU Strasbourg, Johannes Gutenberg - Universität Mainz = Johannes Gutenberg University (JGU), Hôpital Cochin [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), University of Calgary, Service d'hépato-gastroentérologie [CHU Grenoble Alpes], Centre Hospitalier Universitaire [Grenoble] (CHU), Northern Alberta Clinical Trials and Research Centre [Edmonton, Canada], Medizinische Hochschule Hannover (MHH), Universitaetsklinikum Hamburg-Eppendorf = University Medical Center Hamburg-Eppendorf [Hamburg] (UKE), Klinik für Innere Medizin II [Freiburg, Germany], Transgene SA [Illkirch], Transgene SA [Lyon], Johannes Gutenberg - Universität Mainz (JGU), and Centre Hospitalier Universitaire Grenoble Alpes (CHU Grenoble Alpes)
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safety ,HBsAg ,030231 tropical medicine ,Immunology ,Placebo-controlled study ,Phases of clinical research ,Sciences du Vivant [q-bio]/Médecine humaine et pathologie ,immunogenicity ,Placebo ,Antiviral Agents ,Adenoviridae ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Hepatitis B, Chronic ,Immunogenicity, Vaccine ,vaccine ,Immunology and Allergy ,Medicine ,Animals ,Humans ,030212 general & internal medicine ,Adverse effect ,Pharmacology ,Vaccines ,Hepatitis B Surface Antigens ,[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,business.industry ,ELISPOT ,Immunogenicity ,chronicity ,immuno-therapy ,Hepatitis B ,medicine.disease ,3. Good health ,business ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Research Paper - Abstract
Funding: Transgène; International audience; Treatment of chronic hepatitis B (CHB) typically requires life-long administration of drugs. Cohort and pre-clinical studies have established the link between a functional T-cell-mounted immunity and resolution of infection. TG1050 is an adenovirus 5-based vaccine that expresses HBV polymerase and domains of core and surface antigen and has shown immunogenicity and antiviral effects in mice. We performed a phase 1 clinical trial to assess safety and explore immunogenicity and early efficacy of TG1050 in CHB patients. This randomized, double blind, placebo-controlled study included two sequential phases: one single dose cohort (SD, n = 12) and one multiple (3) doses cohort (MD, n = 36). Patients, virally suppressed under nucleoside(d)tide analog NUC therapy, were randomized 1:1:1 across 3 dose levels (DL) and assigned to receive 10(9), 10(10), 10(11) virus particles (vp) of TG1050 and then randomized within each DL to placebo (3:1 and 9:3 vaccines/placebo in each DL, respectively, for the SD and MD cohorts). Cellular (ELISPOT) and antibody responses (anti-Adenovirus), as well as evolution of circulating HBsAg and HBcrAg, were monitored. All doses were well tolerated in both cohorts, without severe adverse event. TG1050 was capable to induce IFN-gamma producing T-cells targeting 1 to 3 encoded antigens, in particular at the 10(10)vp dose. Overall, minor decreases of HBsAg were observed while a number of vaccinees reached unquantifiable HBcrAg by end of the study. In CHB patients under NUC, TG1050 exhibited a good safety profile and was capable to induce HBV-specific cellular immune response. These data support further clinical evaluation, especially in combination studies.
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- 2020
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4. Yeast Virus-Derived Stimulator of the Innate Immune System Augments the Efficacy of Virus Vector-Based Immunotherapy
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Julie Hortelano, Patrick Schultz, Emmanuelle Schaedler, Ronald Rooke, Caroline Tosch, Gunther Hartmann, Laurence Laruelle, Michel Geist, Xavier Préville, Pascale Romby, Christelle Remy-Ziller, Jean-Yves Bonnefoy, Thierry Menguy, Patricia Kleinpeter, Renée Brandely, Anass Jawhari, Jean-Baptiste Marchand, Marie-Christine Claudepierre, Karola Rittner, schultz, patrick, Transgene SA [Illkirch], Transgene SA, Architecture et Réactivité de l'ARN (ARN), Institut de biologie moléculaire et cellulaire (IBMC), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), and University of Bonn
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[SDV.BIO]Life Sciences [q-bio]/Biotechnology ,medicine.medical_treatment ,Immunology ,Saccharomyces cerevisiae ,Biology ,Microbiology ,Virus ,Viral vector ,Cell Line ,Mice ,Immune system ,Virology ,Neoplasms ,Vaccines and Antiviral Agents ,medicine ,Animals ,Immunologic Factors ,RNA, Double-Stranded ,Innate immune system ,Immunotherapy ,Dendritic Cells ,Acquired immune system ,Molecular biology ,Survival Analysis ,Toll-Like Receptor 3 ,[SDV.BIO] Life Sciences [q-bio]/Biotechnology ,Mice, Inbred C57BL ,RNA silencing ,Disease Models, Animal ,Insect Science ,TLR3 ,Cytokines ,RNA, Viral - Abstract
To identify novel stimulators of the innate immune system, we constructed a panel of eight HEK293 cell lines double positive for human Toll-like receptors (TLRs) and an NF-κB-inducible reporter gene. Screening of a large variety of compounds and cellular extracts detected a TLR3-activating compound in a microsomal yeast extract. Fractionation of this extract identified an RNA molecule of 4.6 kb, named nucleic acid band 2 (NAB2), that was sufficient to confer the activation of TLR3. Digests with single- and double-strand-specific RNases showed the double-strand nature of this RNA, and its sequence was found to be identical to that of the genome of the double-stranded RNA (dsRNA) L-BC virus of Saccharomyces cerevisiae . A large-scale process of production and purification of this RNA was established on the basis of chemical cell lysis and dsRNA-specific chromatography. NAB2 complexed with the cationic lipid Lipofectin but neither NAB2 nor Lipofectin alone induced the secretion of interleukin-12(p70) [IL-12(p70)], alpha interferon, gamma interferon-induced protein 10, macrophage inflammatory protein 1β, or IL-6 in human monocyte-derived dendritic cells. While NAB2 activated TLR3, Lipofectin-stabilized NAB2 also signaled via the cytoplasmic sensor for RNA recognition MDA-5. A significant increase of RMA-MUC1 tumor rejection and survival was observed in C57BL/6 mice after prophylactic vaccination with MUC1-encoding modified vaccinia virus Ankara (MVA) and NAB2-Lipofectin. This combination of immunotherapies strongly increased at the injection sites the percentage of infiltrating natural killer (NK) cells and plasmacytoid dendritic cells (pDCs), cell types which can modulate innate and adaptive immune responses. IMPORTANCE Virus-based cancer vaccines offer a good alternative to the treatment of cancer but could be improved. Starting from a screening approach, we have identified and characterized an unexplored biological molecule with immunomodulatory characteristics which augments the efficacy of an MVA-based immunotherapeutic agent. The immune modulator consists of the purified dsRNA genome isolated from a commercially used yeast strain, NAB2, mixed with a cationic lipid, Lipofectin. NAB2-Lipofectin stimulates the immune system via TLR3 and MDA-5. When it was injected at the MVA vaccination site, the immune modulator increased survival in a preclinical tumor model. We could demonstrate that NAB2-Lipofectin augments the MVA-induced infiltration of natural killer and plasmacytoid dendritic cells. We suggest indirect mechanisms of activation of these cell types by the influence of NAB2-Lipofectin on innate and adaptive immunity. Detailed analysis of cell migration at the vaccine injection site and the appropriate choice of an immune modulator should be considered to achieve the rational improvement of virus vector-based vaccination by immune modulators.
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- 2014
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5. Cellular localization and activity of Ad-delivered GFP-CFTR in airway epithelial and tracheal cells
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Ophélia Granio, Katherine J. D. A. Excoffon, Monika Lusky, Caroline Norez, Joseph Zabner, Frédéric Becq, Saw See Hong, Pierre Boulanger, Philip H. Karp, Virologie et pathologie humaine (VirPath), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon, Institut de physiologie et biologie cellulaires (IPBC), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Department of Internat Medicine, University of Iowa [Iowa City], Howard Hughes Medical Institute (HHMI), TRANSGENE SA, Laboratoire TRANSGENE SA, Laboratoire de Virologie Médicale, Hospices Civils de Lyon (HCL), Vaincre la mucoviscidose, CNRS, INSERM, Université Claude Bernard LYON Université de Poitiers, Virologie et pathologie humaine ( VirPath ), Université Claude Bernard Lyon 1 ( UCBL ), Institut de physiologie et biologie cellulaires ( IPBC ), Université de Poitiers-Centre National de la Recherche Scientifique ( CNRS ), University of Iowa [Iowa], Howard Hughes Medical Institute, and Hospices Civils de Lyon ( HCL )
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Pulmonary and Respiratory Medicine ,Adult ,medicine.medical_specialty ,Pathology ,Recombinant Fusion Proteins ,Clinical Biochemistry ,Green Fluorescent Proteins ,Cystic Fibrosis Transmembrane Conductance Regulator ,[ SDV.BBM.BM ] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,Respiratory Mucosa ,Biology ,Adenoviridae ,Cell Line ,cystic fibrosis ,GFP-CFTR ,03 medical and health sciences ,0302 clinical medicine ,Transduction, Genetic ,medicine ,[SDV.MHEP.PHY]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,Cl2 channel ,Humans ,Molecular Biology ,Cellular localization ,Ion channel gating ,030304 developmental biology ,Gynecology ,0303 health sciences ,Microscopy, Confocal ,[ SDV.MHEP.PHY ] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,Cell Biology ,adenovirus ,respiratory system ,CFTRdeficient airway epithelia ,Trachea ,Protein Transport ,030220 oncology & carcinogenesis ,Mutant Proteins ,Ion Channel Gating - Abstract
(IF : 4,608); International audience; Cystic fibrosis is caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene, and the cellular trafficking of the CFTR protein is an essential factor that determines its function in cells. The aim of our study was to develop an Ad vector expressing a biologically active green fluorescent protein (GFP)- CFTR chimera that can be tracked by both its localization and chloride channel function. No study thus far has demonstrated a GFP-CFTR construct that displayed both of these functions in the airway epithelia. Tracheal glandular cells, MM39 (CFTRwt) and CFKM4 (CFTRDF508), as well as human airway epithelial cells from a patient with cystic fibrosis (CF-HAE) and from a healthy donor (HAE) were used for the functional analysis of our Ad vectors, Ad5/ GFP-CFTRwt and Ad5/GFP-CFTRDF508. The GFP-CFTRwt protein expressed was efficiently addressed to the plasma membrane of tracheal cells and to the apical surface of polarized CF-HAE cells, while GFP-CFTRDF508 mutant was sequestered intracellularly. The functionality of the GFP-CFTRwt protein was demonstrated by its capacity to correct the chloride channel activity both in CF-KM4 and CF-HAE cells after Ad transduction. A correlation between the proportion of Ad5-transduced CF-KM4 cells and correction of CFTR function showed that 55 to 70% transduction resulted in 70% correction of the Cl2 channel function. In reconstituted CF-HAE, GFP-CFTRwt appeared as active as the nontagged CFTRwt protein in correcting the transepithelial Cl2 transport. We show for the first time a GFP-CFTR chimera that localized to the apical surface of human airway epithelia and restored epithelial chloride transport to similar levels as nontagged CFTR.
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- 2007
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6. Improvement of calcium handling and changes in calcium-release properties after mini- or full-length dystrophin forced expression in cultured skeletal myotubes
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Guy Raymond, Eric Marchand, Marie-Christine Claudepierre, Christian Cognard, Bruno Constantin, Aklesso Mouzou, Serge Braun, Haouaria Balghi, Anne Cantereau, Christophe Magaud, Institut de physiologie et biologie cellulaires (IPBC), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Transgene SA [Illkirch], and Transgene SA
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musculoskeletal diseases ,congenital, hereditary, and neonatal diseases and abnormalities ,Microinjections ,Duchenne muscular dystrophy ,[SDV]Life Sciences [q-bio] ,Green Fluorescent Proteins ,Muscle Fibers, Skeletal ,chemistry.chemical_element ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC] ,Calcium ,Dystrophin ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Utrophin ,medicine ,[SDV.MHEP.PHY]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,Animals ,Homeostasis ,Muscular dystrophy ,Muscle, Skeletal ,Cells, Cultured ,Fluorescent Dyes ,030304 developmental biology ,Calcium signaling ,Calcium metabolism ,Mice, Inbred C3H ,0303 health sciences ,Microscopy, Confocal ,biology ,Myogenesis ,Cell Biology ,Carbocyanines ,medicine.disease ,musculoskeletal system ,Immunohistochemistry ,Cell biology ,Muscular Dystrophy, Duchenne ,Luminescent Proteins ,Retroviridae ,chemistry ,Biochemistry ,biology.protein ,030217 neurology & neurosurgery ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Plasmids - Abstract
International audience; Dystrophin is a cytoskeletal protein normally expressed underneath the sarcolemma of muscle fibers. The lack of dystrophin in Duchenne muscular Dystrophy (DMD) muscles results in fiber necrosis, which was proposed to be mediated by chronic calcium mishandling. The extensive comparison of dystrophic cells from human or mdx mice with normal muscles have suggested that the lack of dystrophin may alter the resting calcium permeability and steady-state levels of calcium, but this latter observation remains controversial. It is also not clear, whether calcium mishandling is resulting from the dystrophic process or if dystrophin can directly regulate calcium handling in muscle cells. This prompted us to determine if transfection of full-length dystrophin or Becker Muscular Dystrophy (BMD) minidystrophin, a candidate for viral-mediated gene therapy, could change calcium handling properties. We took advantage of specific properties of Sol8 cell line showing the absence of dystrophin expression together with a drastic calcium mishandling. Here, we show that full-length dystrophin allowed the recovery of a low resting intracellular-free calcium concentration together with lower calcium transients. We also show for the first time that stable expression of minidystrophin was able to restore normal calcium handling in Sol8 myotubes through a better control of steady-state levels, calcium transients, and subcellular calcium events. It suggests that dystrophin could play a regulatory role on calcium homeostasis apparatus and that functional links exist between calcium signaling and cytoskeleton.
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- 2004
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7. A statistical methodology to select covariates in high-dimensional data under dependence. Application to the classification of genetic profiles in oncology
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Hélène Dumond, Charlène Thiébaut, Taha Boukhobza, Bérangère Bastien, Aurélie Muller-Gueudin, Anne Gégout-Petit, Transgene SA [Illkirch], Centre de Recherche en Automatique de Nancy (CRAN), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), and Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)
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FOS: Computer and information sciences ,Statistics and Probability ,Clustering high-dimensional data ,Variable selection ,Application Notes ,Computer science ,0211 other engineering and technologies ,Correlated covariates selection ,Mathematics - Statistics Theory ,Context (language use) ,Feature selection ,Statistics Theory (math.ST) ,02 engineering and technology ,Machine learning ,computer.software_genre ,Statistics - Applications ,01 natural sciences ,Methodology (stat.ME) ,010104 statistics & probability ,[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,Covariate ,FOS: Mathematics ,Applications (stat.AP) ,0101 mathematics ,Statistics - Methodology ,[STAT.AP]Statistics [stat]/Applications [stat.AP] ,021103 operations research ,business.industry ,Genetic profiles ,High dimension ,Personalized medicine ,3. Good health ,Variable (computer science) ,Ranking ,Multiple testing procedures ,Aggregated methods ,Artificial intelligence ,Statistics, Probability and Uncertainty ,business ,[STAT.ME]Statistics [stat]/Methodology [stat.ME] ,computer - Abstract
International audience; We propose a new methodology for selecting and ranking covariates associated with a variable of interest in a context of high-dimensional data under dependence but few observations. The methodology successively intertwines the clustering of covariates, decorrelation of covariates using Factor Latent Analysis, selection using aggregation of adapted methods and finally ranking. Simulations study shows the interest of the decorrelation inside the different clusters of covariates. We first apply our method to transcriptomic data of 37 patients with advanced non-small-cell lung cancer who have received chemotherapy, to select the transcriptomic covariates that explain the survival outcome of the treatment. Secondly, we apply our method to 79 breast tumor samples to define patient profiles for a new metastatic biomarker and associated gene network in order to personalize the treatments.
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- 2020
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8. Vascularization of Patient-Derived Tumoroid from Non-Small-Cell Lung Cancer and Its Microenvironment
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Joseph Seitlinger, Anasse Nounsi, Ysia Idoux-Gillet, Eloy Santos Pujol, Hélène Lê, Erwan Grandgirard, Anne Olland, Véronique Lindner, Cécile Zaupa, Jean-Marc Balloul, Eric Quemeneur, Gilbert Massard, Pierre-Emmanuel Falcoz, Guoqiang Hua, Nadia Benkirane-Jessel, univOAK, Archive ouverte, Nanomédecine Régénérative (NanoRegMed), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM), CHU Strasbourg, Faculté de chirurgie dentaire - Strasbourg, Université de Strasbourg (UNISTRA), Transgene SA [Illkirch], Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), and Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
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[SDV.MHEP.AHA] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,[SDV.BIO]Life Sciences [q-bio]/Biotechnology ,Medicine (miscellaneous) ,Sciences du Vivant [q-bio]/Biotechnologies ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,[SDV.MHEP.PSR]Life Sciences [q-bio]/Human health and pathology/Pulmonology and respiratory tract ,General Biochemistry, Genetics and Molecular Biology ,[SDV.BIO] Life Sciences [q-bio]/Biotechnology ,lung cancer ,vascularization ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,[SDV.MHEP.AHA]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,tumor microenvironment ,[SDV.MHEP.PSR] Life Sciences [q-bio]/Human health and pathology/Pulmonology and respiratory tract ,patient-derived tumoroid - Abstract
Patient-derived tumoroid (PDT) has been developed and used for anti-drug screening in the last decade. As compared to other existing drug screening models, a PDT-based in vitro 3D cell culture model could preserve the histological and mutational characteristics of their corresponding tumors and mimic the tumor microenvironment. However, few studies have been carried out to improve the microvascular network connecting the PDT and its surrounding microenvironment, knowing that poor tumor-selective drug transport and delivery is one of the major reasons for both the failure of anti-cancer drug screens and resistance in clinical treatment. In this study, we formed vascularized PDTs in six days using multiple cell types which maintain the histopathological features of the original cancer tissue. Furthermore, our results demonstrated a vascular network connecting PDT and its surrounding microenvironment. This fast and promising PDT model opens new perspectives for personalized medicine: this model could easily be used to test all therapeutic treatments and could be connected with a microfluidic device for more accurate drug screening.
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- 2022
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9. Pharmacokinetics and tolerance of repeated oral administration of 5-fluorocytosine in healthy dogs
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Bernard Klonjkowski, Frédérique Degorce, Jérémy Béguin, Philippe Erbs, Matthias Kohlhauer, Eve Laloy, Baptiste Moreau, Eric Quemeneur, Christelle Maurey, Malbec, Odile, École nationale vétérinaire - Alfort (ENVA), Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Transgene SA [Illkirch], Virologie UMR1161 (VIRO), École nationale vétérinaire - Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Normandie, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut Mondor de Recherche Biomédicale (IMRB), Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR10-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Laboratoire d'Anatomie Pathologique Vétérinaire du Sud-Ouest [Toulouse] (LAPVSO), École nationale vétérinaire d'Alfort (ENVA), École nationale vétérinaire d'Alfort (ENVA)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), and École nationale vétérinaire - Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Dozulé
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Male ,Drug-Related Side Effects and Adverse Reactions ,040301 veterinary sciences ,Veterinary medicine ,medicine.medical_treatment ,[SDV]Life Sciences [q-bio] ,Administration, Oral ,Flucytosine ,Pharmacokinetic ,Pharmacology ,0403 veterinary science ,03 medical and health sciences ,Dogs ,0302 clinical medicine ,Pharmacotherapy ,Pharmacokinetics ,Oral administration ,SF600-1100 ,Antineoplastic agents ,medicine ,Dog ,Animals ,Targeted chemotherapy ,Dog Diseases ,Adverse effect ,Cytosine analog ,Chemotherapy ,General Veterinary ,business.industry ,Research ,Cytosine deaminase ,04 agricultural and veterinary sciences ,General Medicine ,3. Good health ,[SDV] Life Sciences [q-bio] ,030220 oncology & carcinogenesis ,Toxicity ,Drug-related side effects ,Female ,Drug Eruptions ,Fluorouracil ,business ,Adverse reactions - Abstract
Background 5-fluorocytosine is a pyrimidine and a fluorinated cytosine analog mainly used as an antifungal agent. It is a precursor of 5-fluorouracil, which possesses anticancer properties. To reduce systemic toxicity of 5-fluorouracil during chemotherapy, 5- fluorocytosine can be used as a targeted anticancer agent. Expression of cytosine deaminase by a viral vector within a tumor allows targeted chemotherapy by converting 5-fluorocytosine into the cytotoxic chemotherapeutic agent 5-fluorouracil. However, little is known about the tolerance of 5-fluorocytosine in dogs after prolonged administration. Results In three healthy Beagle dogs receiving 100 mg/kg of 5-fluorocytosine twice daily for 14 days by oral route, non-compartmental pharmacokinetics revealed a terminal elimination half-life of 164.5 ± 22.5 min at day 1 and of 179.2 ± 11.5 min, after 7 days of administration. Clearance was significantly decreased between day 1 and day 7 with 0.386 ± 0.031 and 0.322 ± 0.027 ml/min/kg, respectively. Maximal plasma concentration values were below 100 µg/ml, which is considered within the therapeutic margin for human patients. 5-fluorouracil plasma concentration was below the limit of detection at all time points. The main adverse events consisted of depigmented, ulcerated, exudative, and crusty cutaneous lesions 10 to 13 days after beginning 5-fluorocytosine administration. The lesions were localized to the nasal planum, the lips, the eyelids, and the scrotum. Histological analyses were consistent with a cutaneous lupoid drug reaction. Complete healing was observed 15 to 21 days after cessation of 5-fluorocytosine. No biochemical or hematological adverse events were noticed. Conclusions Long term administration of 5-fluorocytosine was associated with cutaneous toxicity in healthy dogs. It suggests that pharmacotherapy should be adjusted to reduce the toxicity of 5-fluorocytosine in targeted chemotherapy.
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- 2021
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10. Fluorescent Tagged Vaccinia Virus Genome Allows Rapid and Efficient Measurement of Oncolytic Potential and Discovery of Oncolytic Modulators
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Johann Foloppe, Charlotte Quentin-Froignant, Sokunthea Top, J. M. Lagarde, Nathalie Silvestre, Philippe Erbs, Renée Brandely, Doris Schmitt, Stéphane Bertagnoli, Annie Findeli, Franck Gallardo, Sandrine Kappler-Gratias, Kerstin Bystricky, Renaud Morin, Catherine Brua, Institut des Technologies Avancées en sciences du Vivant (ITAV), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS), NeoVirTech SAS, Transgene SA [Illkirch], Imactiv-3D, Centre de Biologie Intégrative (CBI), Laboratoire de biologie moléculaire eucaryote (LBME), Centre National de la Recherche Scientifique (CNRS)-Centre de Biologie Intégrative (CBI), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Institut Universitaire de France (IUF), Ministère de l'Education nationale, de l’Enseignement supérieur et de la Recherche (M.E.N.E.S.R.), Interactions hôtes-agents pathogènes [Toulouse] (IHAP), Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), and This work was supported by BPI France through the ILab program. C.Q.F. is recipient of an Industrial Training Convention for Research (CIFRE) doctoral fellowship.
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0301 basic medicine ,viruses ,[SDV]Life Sciences [q-bio] ,Medicine (miscellaneous) ,Biology ,fluorescence labeling ,Genome ,General Biochemistry, Genetics and Molecular Biology ,Virus ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Live cell imaging ,Gene ,lcsh:QH301-705.5 ,poxvirus modulators ,Virology ,3. Good health ,Oncolytic virus ,live cell imaging ,030104 developmental biology ,Ribonucleotide reductase ,chemistry ,lcsh:Biology (General) ,Thymidine kinase ,030220 oncology & carcinogenesis ,Vaccinia ,oncolytic vaccinia virus - Abstract
International audience; As a live biologic agent, oncolytic vaccinia virus has the ability to target and selectively amplify at tumor sites. We have previously reported that deletion of thymidine kinase and ribonucleotide reductase genes in vaccinia virus can increase the safety and efficacy of the virus. Here, to allow direct visualization of the viral genome in living cells, we incorporated the ANCH target sequence and the OR3-Santaka gene in the double-deleted vaccinia virus. Infection of human tumor cells with ANCHOR3-tagged vaccinia virus enables visualization and quantification of viral genome dynamics in living cells. The results show that the ANCHOR technology permits the measurement of the oncolytic potential of the double deleted vaccinia virus. Quantitative analysis of infection kinetics and of viral DNA replication allow rapid and efficient identification of inhibitors and activators of oncolytic activity. Our results highlight the potential application of the ANCHOR technology to track vaccinia virus and virtually any kind of poxvirus in living cells.
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- 2020
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11. Preclinical Evaluation of the Oncolytic Vaccinia Virus TG6002 by Translational Research on Canine Breast Cancer
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Bernard Klonjkowski, Philippe Erbs, Hélène Huet, Pascale Cordier, Johann Foloppe, Jérémy Béguin, Sandrine Cochin, Julie Hortelano, Christelle Pichon, Eve Laloy, Eric Quemeneur, Christelle Maurey, Virginie Nourtier, Virologie UMR1161 (VIRO), École nationale vétérinaire - Alfort (ENVA)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Transgene SA, Service de Médecine Interne, Ecole Nationale Vétérinaire d'Alfort, Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Laboratoire d'Anatomo-cytopathologie, Biopôle Alfort, Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Ecole Nationale Vétérinaire d'Alfort, Industrial Training Convention for Research (CIFRE) doctoral fellowship, and École nationale vétérinaire d'Alfort (ENVA)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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0301 basic medicine ,Cancer Research ,[SDV]Life Sciences [q-bio] ,TG6002 ,cell-line ,suicide gene therapy ,chemistry.chemical_compound ,0302 clinical medicine ,companion animals ,5-fluorouracil ,Pharmacology (medical) ,oncolytic virotherapy ,Mammary tumor ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,vaccinia virus ,3. Good health ,Philippe Erbs ,Oncology ,poxvirus ,030220 oncology & carcinogenesis ,dog ,Molecular Medicine ,Original Article ,virotherapy ,mammry-tumors ,400 Boulevard Gonthier d'Andernach ,CS80166 ,suicide gene ,lcsh:RC254-282 ,Virus ,03 medical and health sciences ,expression ,medicine ,therapy ,model ,business.industry ,Transgene S.A ,Cancer ,tissue ,Suicide gene ,medicine.disease ,mammary tumor ,Fusion protein ,Oncolytic virus ,FCU1 ,030104 developmental biology ,translational research ,chemistry ,Thymidine kinase ,Cancer research ,Parc d'innovation ,Vaccinia ,business - Abstract
Oncolytic virotherapy is a promising therapeutic approach for the treatment of cancer. TG6002 is a recombinant oncolytic vaccinia virus deleted in the thymidine kinase and ribonucleotide reductase genes and armed with the suicide gene FCU1, which encodes a bifunctional chimeric protein that efficiently catalyzes the direct conversion of the nontoxic 5-fluorocytosine into the toxic metabolite 5-fluorouracil. In translational research, canine tumors and especially mammary cancers are relevant surrogates for human cancers and can be used as preclinical models. Here, we report that TG6002 is able to replicate in canine tumor cell lines and is oncolytic in such cells cultured in 2D or 3D as well as canine mammary tumor explants. Furthermore, intratumoral injections of TG6002 lead to inhibition of the proliferation of canine tumor cells grafted into mice. 5-fluorocytosine treatment of mice significantly improves the anti-tumoral activity of TG6002 infection, a finding that can be correlated with its conversion into 5-fluorouracil within infected fresh canine tumor biopsies. In conclusion, our study suggests that TG6002 associated with 5-fluorocytosine is a promising therapy for human and canine cancers., Graphical Abstract, TG6002 is a double-deleted vaccinia virus expressing FCU1 that converts 5-fluorocytosine into 5-fluorouracil. This study demonstrates oncolytic properties of TG6602 in 2D and 3D cultured canine mammary cell lines, in a xenograft model, and in canine mammary tumor explants. Moreover, it establishes 5-fluorouracil production in fresh canine tumor biopsies.
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- 2020
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12. High oncolytic activity of a double deleted Vaccinia Virus Copenhagen strain against malignant pleural mesothelioma
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Delaunay, Tiphaine, Nader, Joëlle, Grard, Marion, Farine, Isabelle, Hedwig, Vera, Foloppe, Johann, Blondy, Thibaut, Violland, Mathilde, Pouliquen, Daniel, Grégoire, Marc, Boisgerault, Nicolas, Erbs, Philippe, Fonteneau, Jean-François, Immunogenic Cell Death and Mesothelioma Therapy (CRCINA-ÉQUIPE 4), Centre de Recherche en Cancérologie et Immunologie Nantes-Angers (CRCINA), Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes), Transgene SA [Illkirch], Senescence Escape and Soluble Markers of Cancer Progression (CRCINA-ÉQUIPE 12), and Bernardo, Elizabeth
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[SDV.CAN] Life Sciences [q-bio]/Cancer ,Oncolytic immunotherapy ,thymidine kinase ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,ribonucleotide reductase ,vaccinia virus ,Pleural mesothelioma - Abstract
International audience; Malignant pleural mesothelioma (MPM) is a cancer of the pleura that lacks efficient treatment. Oncolytic immunotherapy using oncolytic vaccinia virus (VV) may represent an alternative therapeutic approach for the treatment of this malignancy. Here we studied the oncolytic activity of VVTK-RR-/GFP against MPM. This virus is a VV from the Copenhagen strain that is deleted of two genes encoding the thymidine kinase (J2R) and the ribonucleotide reductase (I4L) and that express the green fluorescent protein (GFP). First we show in vitro that VVTK-RR-/GFP efficiently infects and kills the twenty two human MPM cell lines used in this study. We also show that the virus replicates in all eight tested MPM cell lines, however with approximately a 10-fold differences in the amplification level from one cell line to another. Then we studied the therapeutic efficiency of VVTK-RR-/GFP in NOD Scid mice that bear peritoneal human MPM tumors. One intraperitoneal infection of VVTK-RR-/GFP reduces the tumor burden and significantly increases mice survival compared to untreated animals. Thus VVTK-RR- may be a promising OV for the oncolytic immunotherapy of MPM.
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- 2020
13. Safety studies and viral shedding of intramuscular administration of oncolytic vaccinia virus TG6002 in healthy beagle dogs
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Bernard Klonjkowski, Sandrine Cochin, Dominique Tierny, Johann Foloppe, Philippe Erbs, Murielle Gantzer, Jérémy Béguin, Jean-Marc Balloul, Eve Laloy, Virginie Nourtier, Eric Quemeneur, Christelle Maurey, Transgene Sa - Illkirch Graffenstaden, Virologie UMR1161 (VIRO), École nationale vétérinaire d'Alfort (ENVA)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Department of Internal Medicine, École nationale vétérinaire d'Alfort (ENVA), Anatomical Pathology Unit, and Oncovet Clinical Research (OCR)
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Male ,040301 veterinary sciences ,TG6002 ,Vaccinia virus ,Injections, Intramuscular ,Virus ,Canine ,0403 veterinary science ,03 medical and health sciences ,chemistry.chemical_compound ,Dogs ,Medicine ,Animals ,Viral shedding ,030304 developmental biology ,Cancer ,Oncolytic Virotherapy ,0303 health sciences ,Biological Products ,[SDV.BA.MVSA]Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health ,lcsh:Veterinary medicine ,General Veterinary ,business.industry ,04 agricultural and veterinary sciences ,General Medicine ,Suicide gene ,Translational research ,medicine.disease ,Virology ,Oncolytic virus ,3. Good health ,Virus Shedding ,FCU1 ,Titer ,Oncolytic Viruses ,chemistry ,Thymidine kinase ,lcsh:SF600-1100 ,Vaccinia ,Safety ,business ,Research Article - Abstract
Background Cancer is a leading cause of mortality for both humans and dogs. As spontaneous canine cancers appear to be relevant models of human cancers, developing new therapeutic approaches could benefit both species. Oncolytic virotherapy is a promising therapeutic approach in cancer treatment. TG6002 is a recombinant oncolytic vaccinia virus deleted in the thymidine kinase and ribonucleotide reductase genes and armed with the suicide gene FCU1 that encodes a protein which catalyses the conversion of the non-toxic 5-fluorocytosine into the toxic metabolite 5-fluorouracil. Previous studies have shown the ability of TG6002 to infect and replicate in canine tumor cell lines, and demonstrated its oncolytic potency in cell lines, xenograft models and canine mammary adenocarcinoma explants. Moreover, 5-fluorouracil synthesis has been confirmed in fresh canine mammary adenocarcinoma explants infected with TG6002 with 5-fluorocytosine. This study aims at assessing the safety profile and viral shedding after unique or repeated intramuscular injections of TG6002 in seven healthy Beagle dogs. Results Repeated intramuscular administrations of TG6002 at the dose of 5 × 107 PFU/kg resulted in no clinical or biological adverse effects. Residual TG6002 in blood, saliva, urine and feces of treated dogs was not detected by infectious titer assay nor by qPCR, ensuring the safety of the virus in the dogs and their environment. Conclusions These results establish the good tolerability of TG6002 in healthy dogs with undetectable viral shedding after multiple injections. This study supports the initiation of further studies in canine cancer patients to evaluate the oncolytic potential of TG6002 and provides critical data for clinical development of TG6002 as a human cancer therapy.
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- 2020
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14. Vaccinia-based oncolytic immunotherapy Pexastimogene Devacirepvec in patients with advanced hepatocellular carcinoma after sorafenib failure: a randomized multicenter Phase IIb trial (TRAVERSE)
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Olivier Rosmorduc, M. Lusky, Mong Cho, B. McFadden, N. Stojkowitz, N. De Silva, H.C. Lee, Won Young Tak, Philippe Merle, H.J. Yim, Markus Moehler, Marie Hennequi, Ann M. Leen, Derek J. Jonker, O. Ebert, K.S. Byun, Jean-Marc Limacher, Richard H. Patt, Yee Chao, Jeong Heo, François Habersetzer, Jean-Frédéric Blanc, Leyo Ruo, Caroline J. Breitbach, Henning Wege, M. Homerin, N. Gaspar, D. Shen, David H. Kirn, James M. Burke, Adina Pelusio, Seung Woon Paik, Guy Ungerechts, Riccardo Lencioni, A. Baron, A. Kaubisch, Friedrich Foerster, University Medical Center of the Johannes Gutenberg-University Mainz, Pusan National University Hospital, University of Ulsan, Kyungpook National University [Daegu] (KNU), Taipei Veterans General Hospital [Taiwan], Samsung Medical Center Sungkyunkwan University School of Medicine, Institute Division of Hematology/Oncology, Korea University [Seoul], California Pacific Medical Center Research Institute, Heidelberg University Hospital [Heidelberg], University of Ottawa [Ottawa], McMaster University [Hamilton, Ontario], Pusan National University, Montefiore Medical Center [Bronx, New York], Albert Einstein College of Medicine [New York], Universitaetsklinikum Hamburg-Eppendorf = University Medical Center Hamburg-Eppendorf [Hamburg] (UKE), Hôpital de la Croix-Rousse [CHU - HCL], Hospices Civils de Lyon (HCL), Technische Universität Munchen - Université Technique de Munich [Munich, Allemagne] (TUM), Institut de Recherche sur les Maladies Virales et Hépatiques (IVH), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM), Les Hôpitaux Universitaires de Strasbourg (HUS), L'Institut hospitalo-universitaire de Strasbourg (IHU Strasbourg), Institut National de Recherche en Informatique et en Automatique (Inria)-l'Institut de Recherche contre les Cancers de l'Appareil Digestif (IRCAD)-Les Hôpitaux Universitaires de Strasbourg (HUS)-La Fédération des Crédits Mutuels Centre Est (FCMCE)-L'Association pour la Recherche contre le Cancer (ARC)-La société Karl STORZ, CHU Bordeaux [Bordeaux], Hôpital Paul Brousse, Sorbonne Université (SU), University of Miami Leonard M. Miller School of Medicine (UMMSM), Baylor College of Medicine (BCM), Baylor University, and Transgene SA [Illkirch]
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0301 basic medicine ,Sorafenib ,Oncology ,lcsh:Immunologic diseases. Allergy ,medicine.medical_specialty ,Hepatocellular carcinoma ,medicine.medical_treatment ,Immunology ,Pexastimogene-devacirepvec ,Aucun ,Sciences du Vivant [q-bio]/Médecine humaine et pathologie ,lcsh:RC254-282 ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Antigen ,Internal medicine ,medicine ,Clinical endpoint ,Immunology and Allergy ,oncolytic immunotherapy ,oncolytic vaccinia ,Pexa-Vec ,sorafenib ,Original Research ,business.industry ,Immunotherapy ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,3. Good health ,Oncolytic virus ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,Vaccinia ,business ,lcsh:RC581-607 ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,medicine.drug - Abstract
PMC6682346; Pexastimogene devacirepvec (Pexa-Vec) is a vaccinia virus-based oncolytic immunotherapy designed to preferentially replicate in and destroy tumor cells while stimulating anti-tumor immunity by expressing GM-CSF. An earlier randomized Phase IIa trial in predominantly sorafenib-naive hepatocellular carcinoma (HCC) demonstrated an overall survival (OS) benefit. This randomized, open-label Phase IIb trial investigated whether Pexa-Vec plus Best Supportive Care (BSC) improved OS over BSC alone in HCC patients who failed sorafenib therapy (TRAVERSE). 129 patients were randomly assigned 2:1 to Pexa-Vec plus BSC vs. BSC alone. Pexa-Vec was given as a single intravenous (IV) infusion followed by up to 5 IT injections. The primary endpoint was OS. Secondary endpoints included overall response rate (RR), time to progression (TTP) and safety. A high drop-out rate in the control arm (63%) confounded assessment of response-based endpoints. Median OS (ITT) for Pexa-Vec plus BSC vs. BSC alone was 4.2 and 4.4 months, respectively (HR, 1.19, 95% CI: 0.78-1.80; p = .428). There was no difference between the two treatment arms in RR or TTP. Pexa-Vec was generally well-tolerated. The most frequent Grade 3 included pyrexia (8%) and hypotension (8%). Induction of immune responses to vaccinia antigens and HCC associated antigens were observed. Despite a tolerable safety profile and induction of T cell responses, Pexa-Vec did not improve OS as second-line therapy after sorafenib failure. The true potential of oncolytic viruses may lie in the treatment of patients with earlier disease stages which should be addressed in future studies. ClinicalTrials.gov: NCT01387555.
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- 2019
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15. Aggregation of statistical methods for the selection of correlated and high dimensional variables
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Bastien, Bérangère, Gégout-Petit, Anne, Muller-Gueudin, Aurélie, Muller-Gueudin, Aurélie, Transgene SA [Illkirch], Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), and Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)
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[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,[MATH.MATH-ST] Mathematics [math]/Statistics [math.ST] ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
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- 2019
16. A statistical methodology to select covariates in high-dimensional data under dependence. Application to the classification of genetic profiles associated with outcome of a non-small-cell lung cancer treatment
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Bastien, Bérangère, Chakir, Hafid, Gégout-Petit, Anne, Muller-Gueudin, Aurélie, Shi, Yaojie, Transgene SA [Illkirch], Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Toulouse School of Economics (TSE-R), Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de la Recherche Agronomique (INRA)-École des hautes études en sciences sociales (EHESS)-Centre National de la Recherche Scientifique (CNRS), Toulouse School of Economics (TSE), École des hautes études en sciences sociales (EHESS)-Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse 1 Capitole (UT1), Muller-Gueudin, Aurélie, and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
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Variable selection ,genetic profiles ,[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,Multiple testing procedures ,Correlated covariates selection ,Aggregated methods ,Ranking ,[MATH.MATH-ST] Mathematics [math]/Statistics [math.ST] ,High dimension - Abstract
We propose a new methodology to select and rank covariates associated to avariable of interest in a context of high-dimensional data under dependencebut few observations. The methodology imbricates successively clustering ofcovariates, decorrelation of covariates using Factor Latent Analysis, selectionusing aggregation of adapted methods and finally ranking. Simulations studyshows the interest of the decorrelation inside the different clusters of covariates.The objective of our method is to determine profiles of patients linked withthe outcome of a treatment. We apply our method on transcriptomic data ofn = 37 patients with advanced non-small-cell lung cancer, who have receivedchemotherapy. The survival time of these patients being known, we apply ourmethod to select the covariates that are the most linked with the outcometreatment among a set of more than 50 000 transcriptomic covariates. Weobtain different transcriptomic profiles for the patients whose survival time wasshort, versus the other patients with longer survival time.
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- 2018
17. Oncolytic viruses sensitize human tumor cells for NY-ESO-1 tumor antigen recognition by CD4+ effector T cells
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Frédéric Tangy, E. Antonio Chiocca, Monique Gannagé, Yaohe Wang, Mathilde Violland, Jean-François Fonteneau, Fabrice Le Boeuf, John C. Bell, Nathalie Labarrière, Soizic Dutoit, Dace Pjanova, Brigitte Dréno, Marc Grégoire, Tiphaine Delaunay, Philippe Erbs, Virginie Vignard, Kristine Vaivode, Nicolas Boisgerault, Christian Münz, University of Zurich, Fonteneau, Jean-François, Immunogenic Cell Death and Mesothelioma Therapy (CRCINA-ÉQUIPE 4), Centre de Recherche en Cancérologie et Immunologie Nantes-Angers (CRCINA), Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes), LabEX IGO Immunothérapie Grand Ouest, Nantes Université (Nantes Univ), Anti-Tumor Immunosurveillance and Immunotherapy (CRCINA-ÉQUIPE 3), Institute of Experimental Immunology - IEI [Zürich, Switzerland], Université de Zurich [Switzerland], School of Medicine [Geneva, Switzerland], Université de Genève = University of Geneva (UNIGE), Service de dermatologie [Nantes], Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes), Clinical and Translational Research in Skin Cancer (CRCINA-ÉQUIPE 2), Latvian Biomedical Research and Study Centre [Rīga], Centre for Molecular Oncology [London, UK], Queen Mary University of London (QMUL)-Barts Cancer Institute [London, UK], National Centre for International Research in Cell and Gene Therapy [Henan Sheng, Chine], Sino-British Research Centre for Molecular Oncology [Henan Sheng, Chine]-Zhengzhou University [Chine], Harvey Cushing Neuro-Oncology Laboratories [Boston, USA] (Department of Neurosurgery), Harvard Medical School [Boston] (HMS)-Brigham and Women's Hospital [Boston], Center for Innovative Cancer Therapeutics [Ottawa, Canada], Ottawa Hospital Research Institute [Ottawa] (OHRI), University of Ottawa [Ottawa], Transgene SA [Illkirch], Génomique virale et vaccination, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), ANR-16-CE18-0016,OncoMeVax,Un virus de la rougeole modifié pour traiter le cancer(2016), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Centre National de la Recherche Scientifique (CNRS)-Université d'Angers (UA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Centre National de la Recherche Scientifique (CNRS)-Université d'Angers (UA), Université de Genève (UNIGE), Zhengzhou University [Chine]-Sino-British Research Centre for Molecular Oncology [Henan Sheng, Chine], Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris], Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), and Bernardo, Elizabeth
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0301 basic medicine ,lcsh:Immunologic diseases. Allergy ,[SDV.IMM] Life Sciences [q-bio]/Immunology ,medicine.medical_treatment ,Immunology ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,610 Medicine & health ,10263 Institute of Experimental Immunology ,lcsh:RC254-282 ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,Cancer immunotherapy ,Antigen ,cd4+ t lymphocytes ,medicine ,melanoma ,Immunology and Allergy ,Cytotoxic T cell ,tumor-associated antigens ,Original Research ,2403 Immunology ,biology ,Immunotherapy ,[SDV.IMM.IMM]Life Sciences [q-bio]/Immunology/Immunotherapy ,biology.organism_classification ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Tumor antigen ,3. Good health ,Oncolytic virus ,030104 developmental biology ,Oncology ,Vesicular stomatitis virus ,oncolytic viruses ,030220 oncology & carcinogenesis ,Cancer research ,2723 Immunology and Allergy ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,570 Life sciences ,oncolytic immunotherapy ,2730 Oncology ,[SDV.IMM.IMM] Life Sciences [q-bio]/Immunology/Immunotherapy ,lcsh:RC581-607 - Abstract
International audience; Oncolytic immunotherapy using oncolytic viruses (OV) has been shown to stimulate the antitumor immune response by inducing the release of tumorassociated antigens (TAA) and danger signals from the dying infected tumor cells. In this study, we sought to determine if the lysis of tumor cells induced by different OV: measles virus, vaccinia virus, vesicular stomatitis virus, herpes simplex type I virus, adenovirus or enterovirus, has consequences on the capacity of tumor cells to present TAA, such as NY-ESO-1. We show that the co-culture of NY-ESO-1neg/HLADP4pos melanoma cells with NY-ESO-1pos/HLA-DP4neg melanoma cells infected and killed by different OV induces an intercellular transfer of NY-ESO-1 that allows the recognition of NY-ESO-1neg/HLA-DP4pos tumor cells by an HLA-DP4/NY-ESO-1(157- 170)-specific CD4+ cytotoxic T cell clone, NY67. We then confirmed this result in a second model with an HLA-DP4+ melanoma cell line that expresses a low amount of NY-ESO-1. Recognition of this cell line by the NY67 clone is largely increased in the presence of OV productive infection. Altogether, our results show for the first time another mechanism of stimulation of the anti-tumor immune response by OV, via the loading of tumor cells with TAA that sensitizes them for direct recognition by specific effector CD4+ T cells, supporting the use of OV for cancer immunotherapy.
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- 2018
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18. Oncolytic properties of non-vaccinia poxviruses
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Philippe Erbs, Eric Quemeneur, Marine Ricordel, Stéphane Bertagnoli, Johann Foloppe, Christelle Pichon, Sandrine Cochin, Pascale Cordier, Caroline Tosch, Annie Findeli, Christelle Camus-Bouclainville, Transgene SA, Interactions hôtes-agents pathogènes [Toulouse] (IHAP), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
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0301 basic medicine ,oncolytic properties ,viruses ,Virologie ,Médecine humaine et pathologie ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Biology ,medicine.disease_cause ,Virus ,RCNtk-/gfp::fcu1 ,03 medical and health sciences ,chemistry.chemical_compound ,non-vaccinia poxviruses ,0302 clinical medicine ,Virology ,medicine ,Poxviridae ,Cancer ,Cell growth ,Suicide gene ,biology.organism_classification ,3. Good health ,Oncolytic virus ,030104 developmental biology ,Oncology ,chemistry ,Thymidine kinase ,030220 oncology & carcinogenesis ,Raccoonpox virus ,[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology ,Human health and pathology ,Vaccinia ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Research Paper - Abstract
International audience; Vaccinia virus, a member of the Poxviridae family, has been extensively used as an oncolytic agent and has entered late stage clinical development. In this study, we evaluated the potential oncolytic properties of other members of the Poxviridae family. Numerous tumor cell lines were infected with ten non-vaccinia poxviruses to identify which virus displayed the most potential as an oncolytic agent. Cell viability indicated that tumor cell lines were differentially susceptible to each virus. Raccoonpox virus was the most potent of the tested poxviruses and was highly effective in controlling cell growth in all tumor cell lines. To investigate further the oncolytic capacity of the Raccoonpox virus, we have generated a thymidine kinase (TK)-deleted recombinant Raccoonpox virus expressing the suicide gene FCU1. This TK-deleted Raccoonpox virus was notably attenuated in normal primary cells but replicated efficiently in numerous tumor cell lines. In human colon cancer xenograft model, a single intratumoral inoculation of the recombinant Raccoonpox virus, in combination with 5-fluorocytosine administration, produced relevant tumor growth control. The results demonstrated significant antitumoral activity of this new modified Raccoonpox virus armed with FCU1 and this virus could be considered to be included into the growing armamentarium of oncolytic virotherapy for cancer.
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- 2018
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19. Analysis of in vivo responses by mixed-effect models
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Batista, Levy, Bastien, Bérangère, Bastogne, Thierry, Erbs, Philippe, Folope, Johann, CYBERnano [Villers-lès-Nancy], Centre de Recherche en Automatique de Nancy (CRAN), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Transgene SA [Illkirch], Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Bastogne, Thierry, and Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)
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[STAT.AP]Statistics [stat]/Applications [stat.AP] ,[STAT.AP] Statistics [stat]/Applications [stat.AP] ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,[MATH.MATH-ST] Mathematics [math]/Statistics [math.ST] - Abstract
Présentation Poster; International audience; Objectives. In in vivo experimentation, the large intra-group variability between animals is a major obstacle that prevents to detect significant therapeutic effects of treatment factors. Our objective is to assess a new statistical method able to better estimate and characterize the additive effects of the combination of an oncolytic virus (TG6002) and the prodrug flucytosine (5-FC) associated in an anti-cancer treatment. The experimental data are kinetics of tumor growth collected during in vivo assays carried out on mice. Methods. The experimental set up is decomposed into four main steps. Firstly, a full factorial design of experiments is proposed. TG6002 was tested at four concentrations in combination or not with 5-FC. Eight groups of 13 mice are randomly affected to each experimental condition. Secondly, we propose a mixed-effect model to describe the kinetic growth of the mean tumor diameter. In a third step, the model parameters are determined with a maximum likelihood estimator based on an expectation-maximization algorithm. Finally, effects of the two examined components are assessed with a Wald test.Results. With our model-based approach, we show a 3% reduction of the therapeutic response time due to 5-FC and a division by five of the growth delay with TG6002.Conclusion. Results confirm the practical relevance of mixed-effect kinetic models to increase the statistical power of statistical tests applied to in vivo studies and efficacy of the combination TG6002 with 5-FC.
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- 2017
20. Aggregated methods for covariates selection and ranking in high-dimensional data under dependence
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Gégout-Petit, Anne, Bastien, Bérangère, Muller-Gueudin, Aurélie, Shi, Yaojie, Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Transgene SA [Illkirch], Toulouse School of Economics (TSE), École des hautes études en sciences sociales (EHESS)-Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse 1 Capitole (UT1), Gégout-Petit, Anne, Toulouse School of Economics (TSE-R), Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de la Recherche Agronomique (INRA)-École des hautes études en sciences sociales (EHESS)-Centre National de la Recherche Scientifique (CNRS), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
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[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,[MATH.MATH-ST] Mathematics [math]/Statistics [math.ST] - Abstract
International audience; We propose a new methodology to select and rank covariates associated to a variable of interest in a context of high-dimensional data under dependence but few observations. The methodology imbricates successively rough selection, clustering of variables, decorrelation of variables using Factor Latent Analysis, selection using aggregation of adapted methods and finally ranking through bootstrap replications. Simulations study shows the interest of the decorrelation inside the different clusters of covariates. The methodology is applied to real data
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- 2017
21. Aggregated methods for covariates selection in high-dimensional data under dependence
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Gégout-Petit, Anne, Muller-Gueudin, Aurélie, Shi, Yaojie, Bastien, Bérangère, Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Toulouse School of Economics (TSE), École des hautes études en sciences sociales (EHESS)-Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse 1 Capitole (UT1), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Transgene SA [Illkirch], Toulouse School of Economics (TSE-R), Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de la Recherche Agronomique (INRA)-École des hautes études en sciences sociales (EHESS)-Centre National de la Recherche Scientifique (CNRS), and Gégout-Petit, Anne
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[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,covariates selection ,Multiple testing procedures ,Aggregated methods ,[MATH.MATH-ST] Mathematics [math]/Statistics [math.ST] ,High dimension - Abstract
International audience; We propose a new methodology to select and rank covariates associated to a variable of interest in a context of high-dimensional data under dependence but few observations. The methodology imbricates successively rough selection, clustering of variables, decorrelation of variables using Factor Latent Analysis, selection using aggregation of adapted methods and finally ranking through bootstrap replications. Simulations study shows the interest of the decorrelation inside the different clusters of covariates. The methodology is applied to real data
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- 2017
22. Identification of new MUC1 epitopes using HLA-transgenic animals: implication for immunomonitoring
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Caroline Tosch, Ronald Rooke, François Lemonnier, Tanja Scheikl-Gatard, BMC, BMC, SONOGEN AG, Transgene SA [Illkirch], Institut Cochin (IC UM3 (UMR 8104 / U1016)), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut de Recherches Internationales Servier [Suresnes] (IRIS), Institut Cochin (UM3 (UMR 8104 / U1016)), and Université Paris Descartes - Paris 5 (UPD5) - Institut National de la Santé et de la Recherche Médicale (INSERM) - Centre National de la Recherche Scientifique (CNRS)
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Cytotoxicity, Immunologic ,[SDV]Life Sciences [q-bio] ,Immunology ,Population ,Antibody Affinity ,lcsh:Medicine ,Mice, Transgenic ,MUC1 ,Human leukocyte antigen ,CD8-Positive T-Lymphocytes ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Epitope ,Epitopes ,Interferon-gamma ,03 medical and health sciences ,0302 clinical medicine ,Monitoring, Immunologic ,Histocompatibility Antigens ,MHC class I ,Animals ,Humans ,Amino Acid Sequence ,education ,Cancer ,education.field_of_study ,Research ,ELISPOT ,Mucin-1 ,lcsh:R ,General Medicine ,Tumor antigen ,3. Good health ,Immunomonitoring ,[SDV] Life Sciences [q-bio] ,Tetramer assay ,030220 oncology & carcinogenesis ,biology.protein ,Peptides ,Ex vivo ,030215 immunology - Abstract
Background The success of immunotherapeutics in oncology and the search for further improvements has prompted revisiting the use of cancer vaccines. In this context, knowledge of the immunogenic epitopes and the monitoring of the immune response cancer vaccines generate are essential. MUC1 has been considered one of the most important tumor associated antigen for decades. Methods To identify HLA-restricted MUC1 peptides we used eight human MHC class I transgenic mouse lines, together covering more than 80% of the human population. MUC1 peptides were identified by vaccinating each line with full length MUC1 coding sequences and using an IFNγ ELIspot restimulation assay. Relevant peptides were tested in a flow cytometry-based tetramer assay and for their capacity to serve as target in an in vivo killing assay. Results Four previously identified MUC1 peptides were confirmed and five are described here for the first time. These nine peptide-MHC combinations were further characterized. Six gave above-background tetramer staining of splenocytes from immunized animals and three peptides were induced more than 5% specific in vivo killing. Conclusions These data describe for the first time five new HLA class I-restricted peptides and revisit some that were previously described. They also emphasize the importance of using in vivo/ex vivo models to screen for immunogenic peptides and define the functions for individual peptide-HLA combinations. Electronic supplementary material The online version of this article (doi:10.1186/s12967-017-1254-0) contains supplementary material, which is available to authorized users.
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- 2017
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23. Analyse de données transcriptomiques et protéomiques en oncologie
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Bastien, Bérangère, Shi, Yaojie, Muller-Gueudin, Aurélie, Gegout-Petit, Anne, Transgene SA [Illkirch], Toulouse School of Economics (TSE-R), Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de la Recherche Agronomique (INRA)-École des hautes études en sciences sociales (EHESS)-Centre National de la Recherche Scientifique (CNRS), Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Transgene, Strasbourg, Inria Nancy Grand-Est, équipe BIGS, Toulouse School of Economics (TSE), École des hautes études en sciences sociales (EHESS)-Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse 1 Capitole (UT1), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Université Toulouse 1 Capitole (UT1), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de la Recherche Agronomique (INRA)-École des hautes études en sciences sociales (EHESS)-Centre National de la Recherche Scientifique (CNRS)
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Facteurs latents ,[MATH.MATH-ST]Mathematics [math]/Statistics [math.ST] ,aggrégation de méthodes ,cancer ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Tests multiples ,Apprentissage ,clustering ,traitement - Published
- 2017
24. Analysis of in vivo responses by mixed-effect models reference
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Batista, Levy, Bastien, Bérangère, Bastogne, Thierry, Foloppe, Johann, Erbs, Philippe, Bastogne, Thierry, CYBERnano [Villers-lès-Nancy], Centre de Recherche en Automatique de Nancy (CRAN), Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL), Biology, genetics and statistics (BIGS), Inria Nancy - Grand Est, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Élie Cartan de Lorraine (IECL), Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Transgene SA [Illkirch], and Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)
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[STAT.AP]Statistics [stat]/Applications [stat.AP] ,[STAT.AP] Statistics [stat]/Applications [stat.AP] ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,[SDV.BA] Life Sciences [q-bio]/Animal biology ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processing ,[SPI.SIGNAL] Engineering Sciences [physics]/Signal and Image processing - Abstract
Présentation Poster; International audience; Objectives. In in vivo experimentation, the large intra-group variability between animals is a major obstacle that prevents to detect significant therapeutic effects of treatment factors. Our objective is to assess a new statistical method able to better estimate and characterize the additive effects of the combination of an oncolytic virus (TG6002) and the prodrug flucytosine (5-FC) associated in an anti-cancer treatment. The experimental data are kinetics of tumor growth collected during in vivo assays carried out on mice. Methods. The experimental set up is decomposed into four main steps. Firstly, a full factorial design of experiments is proposed. TG6002 was tested at four concentrations in combination or not with 5-FC. Eight groups of 13 mice are randomly affected to each experimental condition. Secondly, we propose a mixed-effect model to describe the kinetic growth of the mean tumor diameter. In a third step, the model parameters are determined with a maximum likelihood estimator based on an expectation-maximization algorithm. Finally, effects of the two examined components are assessed with a Wald test.Results. With our model-based approach, we show a 3% reduction of the therapeutic response time due to 5-FC and a division by five of the growth delay with TG6002.Conclusion. Results confirm the practical relevance of mixed-effect kinetic models to increase the statistical power of statistical tests applied to in vivo studies and efficacy of the combination TG6002 with 5-FC.
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- 2017
25. Cowpox Virus: A New and Armed Oncolytic Poxvirus
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Stéphane Bertagnoli, Johann Foloppe, Marine Ricordel, Delphine Antoine, Pascale Cordier, Sandrine Cochin, Christelle Camus-Bouclainville, Eric Quemeneur, Nathalie Sfrontato, Philippe Erbs, Christelle Pichon, Caroline Tosch, Transgene SA, Interactions hôtes-agents pathogènes [Toulouse] (IHAP), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
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0301 basic medicine ,Cancer Research ,Virologie ,Cowpox ,Médecine humaine et pathologie ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Biology ,lcsh:RC254-282 ,Virus ,03 medical and health sciences ,Virology ,medicine ,Cytotoxic T cell ,Pharmacology (medical) ,Cancer ,Cowpox virus ,armed ,Suicide gene ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,cowpox ,3. Good health ,Oncolytic virus ,030104 developmental biology ,Oncology ,oncolytic ,Thymidine kinase ,[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology ,Molecular Medicine ,Oncolytic Virus Therapy ,Original Article ,Human health and pathology ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
Oncolytic virus therapy has recently been recognized as a promising new therapeutic approach for cancer treatment. In this study, we are proposing for the first time to evaluate the in vitro and in vivo oncolytic capacities of the Cowpox virus (CPXV). To improve the tumor selectivity and oncolytic activity, we developed a thymidine kinase (TK)-deleted CPXV expressing the suicide gene FCU1, which converts the non-toxic prodrug 5-fluorocytosine (5-FC) into cytotoxic 5-fluorouracil (5-FU) and 5-fluorouridine-5′-monophosphate (5-FUMP). This TK-deleted virus replicated efficiently in human tumor cell lines; however, it was notably attenuated in normal primary cells, thus displaying a good therapeutic index. Furthermore, this new recombinant poxvirus rendered cells sensitive to 5-FC. In vivo, after systemic injection in mice, the TK-deleted variant caused significantly less mortality than the wild-type strain. A biodistribution study demonstrated high tumor selectivity and low accumulation in normal tissues. In human xenograft models of solid tumors, the recombinant CPXV also displayed high replication, inducing relevant tumor growth inhibition. This anti-tumor effect was improved by 5-FC co-administration. These results demonstrated that CPXV is a promising oncolytic vector capable of expressing functional therapeutic transgenes. Keywords: cowpox, oncolytic, armed
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- 2017
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26. Impact of TG4010 Vaccine on Health-Related Quality of Life in Advanced Non-Small-Cell Lung Cancer: Results of a Phase IIB Clinical Trial
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Amélie Anota, Franck Bonnetain, Jean-Marc Limacher, Bérangère Bastien, Mariette Mercier, Christine Rotonda, Gisèle Lacoste, Elisabeth Quoix, Centre d'investigation clinique - Epidémiologie clinique [Nancy] (CIC-EC), Centre d'investigation clinique [Nancy] (CIC), Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL)-Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL), Service d'Epidémiologie et Evaluations Cliniques [CHRU Nancy] (Pôle S2R), Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy), Carcinogénèse épithéliale : facteurs prédictifs et pronostiques - UFC (EA 3181) (CEF2P / CARCINO), Centre Hospitalier Régional Universitaire de Besançon (CHRU Besançon)-Université de Franche-Comté (UFC), Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC), Unité de Méthodologie et de Qualité de Vie en Cancérologie (UMQVC), Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-Centre Hospitalier Régional Universitaire de Besançon (CHRU Besançon)-Université de Franche-Comté (UFC), Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-Pôle cancérologie (CHRU Besançon), Centre Hospitalier Régional Universitaire de Besançon (CHRU Besançon)-Institut Régional Fédératif du Cancer (IRFC), Transgene SA [Illkirch], CHU Strasbourg, and Centre Hospitalier Régional Universitaire de Besançon (CHRU Besançon)
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Oncology ,Male ,medicine.medical_specialty ,Lung Neoplasms ,medicine.medical_treatment ,lcsh:Medicine ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Cancer Vaccines ,Deoxycytidine ,law.invention ,03 medical and health sciences ,[SCCO]Cognitive science ,0302 clinical medicine ,Quality of life ,Randomized controlled trial ,law ,Internal medicine ,Carcinoma, Non-Small-Cell Lung ,medicine ,Global health ,Carcinoma ,Humans ,Lung cancer ,lcsh:Science ,030304 developmental biology ,Aged ,0303 health sciences ,Chemotherapy ,Multidisciplinary ,Membrane Glycoproteins ,business.industry ,lcsh:R ,Mucin-1 ,Combination chemotherapy ,Middle Aged ,medicine.disease ,Gemcitabine ,3. Good health ,respiratory tract diseases ,Clinical trial ,Treatment Outcome ,030220 oncology & carcinogenesis ,Quality of Life ,lcsh:Q ,Female ,Cisplatin ,business ,Research Article - Abstract
International audience; Background: This study describes the effect of TG4010 vaccine on Health related Quality of Life (HRQOL) in patients with stage IIIb and IV non-small-cell lung cancer (NSCLC).Methods: 148 patients with advanced NSCLC expressing MUC1 were randomly assigned to receive TG4010 plus chemotherapy or chemotherapy alone. HRQOL was assessed with the Functional Assessment of Cancer Therapy-Lung (FACT-L) at baseline and every 6 weeks until disease progression. Time until definitive deterioration (TUDD) of the four well-being dimensions of the FACT-L physical (PWB), functional (FWB), emotional (EWB) and social well-being (SWB) and the Lung Cancer Subscale (LCS) domains were analyzed for a 5-point minimal clinically important difference.Results: No difference of TUDD of HRQOL has been found between treatment arms. No prognostic factors have been found to have a significant impact on the TUDD of PWB, SWB and LCS domains. The gender, the performance status and the smoking habits seemed to be associated with a shorter TUDD of EWB domain. The smokers and the former smokers seemed to present a shorter TUDD of FWB domain.Conclusion: This study suggests that adding therapeutic vaccination with TG4010 to standard chemotherapy in patients with advanced NSCLC is associated with a similar evolution in HRQOL compared to chemotherapy alone.
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- 2015
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27. Oncolytic immunotherapy: The new clinical outbreak
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Fonteneau, Jean-François, Achard, Carole, Zaupa, Cécile, Foloppe, Johann, Erbs, Philippe, Centre de Recherche en Cancérologie Nantes-Angers (CRCNA), Centre Hospitalier Universitaire d'Angers (CHU Angers), PRES Université Nantes Angers Le Mans (UNAM)-PRES Université Nantes Angers Le Mans (UNAM)-Hôtel-Dieu de Nantes-Institut National de la Santé et de la Recherche Médicale (INSERM)-Hôpital Laennec-Centre National de la Recherche Scientifique (CNRS)-Faculté de Médecine d'Angers-Centre hospitalier universitaire de Nantes (CHU Nantes), Biotechnology, Cancer Research, Cell Biology, Transgene Sa - Illkirch Graffenstaden, and Bernardo, Elizabeth
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Editorial ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience;
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- 2015
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28. Adenovirus protein IX sequesters host-cell promyelocytic leukaemia protein and contributes to efficient viral proliferation
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Manuel Rosa‐Calatrava, Francine Puvion‐Dutilleul, Pierre Lutz, Dominique Dreyer, Hugues De Thé, Bruno Chatton, Claude Kedinger, Transgene SA, Génétique moléculaire et intégration des fonctions cellulaires (GMIFC), Centre National de la Recherche Scientifique (CNRS), INSERM U944 Laboratoire de Pathologie et Virologie Moléculaire, Laboratoire de Pathologie et Virologie Moléculaire, Biotechnologie des interactions macromoléculaires (BIM), Université Louis Pasteur - Strasbourg I-Centre National de la Recherche Scientifique (CNRS), and Institut Gilbert-Laustriat : Biomolécules, Biotechnologie, Innovation Thérapeutique
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Adenoviridae Infections ,viruses ,[SDV]Life Sciences [q-bio] ,Scientific Report ,Intranuclear Inclusion Bodies ,Adenovirus Protein ,Promyelocytic Leukemia Protein ,Virus Replication ,medicine.disease_cause ,Biochemistry ,Adenoviridae ,Cell Line ,03 medical and health sciences ,Promyelocytic leukemia protein ,Genetics ,medicine ,Humans ,Nuclear protein ,Molecular Biology ,Transcription factor ,030304 developmental biology ,0303 health sciences ,biology ,Tumor Suppressor Proteins ,030302 biochemistry & molecular biology ,Nuclear Proteins ,Molecular biology ,Recombinant Proteins ,Neoplasm Proteins ,Protein Structure, Tertiary ,3. Good health ,Capsid ,Viral replication ,Cell culture ,biology.protein ,Capsid Proteins ,Transcription Factors - Abstract
The product of adenovirus type 5 (Ad5) gene IX, protein IX (pIX), is a multifunctional protein that stabilizes the viral capsid and has transcriptional activity. We show that pIX also contributes to the Ad5-induced reorganization of the host-cell nuclear ultrastructure: pIX induces the formation of specific and dynamic nuclear inclusions, and the host promyelocytic leukaemia (PML) protein, which is the main structural organizer of PML bodies, is stably relocated and confined within the pIX-induced inclusions late in infection. Our results suggest that Ad5 has evolved a unique strategy that leads to the sustained neutralization of PML bodies throughout infection, thereby ensuring optimal viral proliferation.
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- 2003
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29. The α-Glucosidase Inhibitor 1-Deoxynojirimycin Blocks Human Immunodeficiency Virus Envelope Glycoprotein-Mediated Membrane Fusion at the CXCR4 Binding Step
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Régis Guieu, Marie-Jeanne Papandréou, Marie Paule Kieny, Rym Barbouche, Emmanuel Fenouillet, Centre de recherche en neurobiologie - neurophysiologie de Marseille (CRN2M), Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Laboratoire des Venins et Toxines, Institut Pasteur de Tunis, Institut Pasteur de Tunis, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP), CNRS FRE2738 (FRE2738), Hôpital de la Timone [CHU - APHM] (TIMONE), Transgene SA, Neurobiologie des interactions cellulaires et neurophysiopathologie - NICN (NICN), and Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS)
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Receptors, CXCR4 ,1-Deoxynojirimycin ,Glycosylation ,viruses ,[SDV]Life Sciences [q-bio] ,HIV Envelope Protein gp120 ,Biology ,Ligands ,Antiviral Agents ,Membrane Fusion ,Virus ,law.invention ,Mice ,chemistry.chemical_compound ,law ,Viral entry ,Cricetinae ,[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,Animals ,Humans ,Glycoside Hydrolase Inhibitors ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,Receptor ,Cells, Cultured ,Pharmacology ,chemistry.chemical_classification ,HIV ,virus diseases ,Lipid bilayer fusion ,alpha-Glucosidases ,Virology ,Cell biology ,Drug Combinations ,chemistry ,CD4 Antigens ,Recombinant DNA ,Molecular Medicine ,Glycoprotein - Abstract
1-Deoxynojirimycin (DNM) is a saccharide decoy that inhibits cellular alpha-glucosidase I-II activity. Treatment by DNM of human immunodeficiency virus (HIV)-infected lymphocyte cultures inhibits virus spread. The functional properties of the membrane-associated Env glycoprotein (Env) modified in the presence of DNM remain unclear because previous reports on this subject have essentially used recombinant soluble Envs whose properties differ notably from those of Env anchored on the surface of the virus. To model virus-associated Env synthesized in the presence of DNM, native Env was expressed at the surface of mammalian cells treated with DNM. As expected, its glycosylation pattern was altered in the presence of the inhibitor. Env was found able to bind CD4, whereas its ability to induce membrane fusion was abolished. The immunoreactivity of regions involved in interactions of Env with CXCR4 (V1, V2, C2, and V3) was modified and Env displayed altered interaction with this coreceptor. These results are consistent with the inhibition by DNM of virus entry at the Env/coreceptor interaction step. Finally, preliminary data indicate that suboptimal concentrations of DNM and natural or synthetic CXCR4 ligands used in combination potently inhibit the Env-mediated membrane fusion process. Altogether, our results suggest that DNM and its analogs deserve further investigation as anti-HIV agents in combination with experimental compounds targeting CXCR4 to inhibit each partner of this crucial step of HIV entry.
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- 2002
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30. An Anti-Human Immunodeficiency Virus Multiple Antigen Peptide Encompassing the Cleavage Region of the Env Precursor Interferes With Membrane Fusion at a Post-CD4 Binding Step
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Emmanuel Fenouillet, Etienne Decroly, Marie Paule Kieny, Rym Barbouche, Laboratoire des Venins et Toxines, Institut Pasteur de Tunis, Institut Pasteur de Tunis, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP), Pathogénie des infections à lentivirus, Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR48, Institut des sciences biologiques (INSB-CNRS)-Institut des sciences biologiques (INSB-CNRS), Transgene SA, Neurobiologie des interactions cellulaires et neurophysiopathologie - NICN (NICN), and Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS)
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Anti-HIV Agents ,HIV Antigens ,viruses ,[SDV]Life Sciences [q-bio] ,Genetic Vectors ,Molecular Sequence Data ,Cell ,membrane fusion ,Vaccinia virus ,Peptide ,HIV Env ,HIV Envelope Protein gp120 ,Biology ,Cleavage (embryo) ,Giant Cells ,Cell Line ,Antigen ,Virology ,[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,medicine ,Humans ,Amino Acid Sequence ,Lymphocytes ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,Peptide sequence ,cleavage sequence ,chemistry.chemical_classification ,Syncytium ,Cell Membrane ,Gene Products, env ,Lipid bilayer fusion ,virus diseases ,Molecular biology ,Peptide Fragments ,anti-HIV peptide ,medicine.anatomical_structure ,chemistry ,Cell culture ,CD4 Antigens ,HIV-2 ,HIV-1 ,processing ,Protein Processing, Post-Translational ,Protein Binding - Abstract
CLIV is a multiple antigen peptide ([PTKAKRRVVQREKR](4)-K(2)-K-betaA) that encompasses the cleavage region of the human immunodeficiency virus type 1 (HIV-1) envelope precursor. It displays an antiviral activity against HIV-1 and HIV-2 and inhibits HIV-1 Env-mediated cell-to-cell fusion. This effect has previously been attributed to interference with Env processing, resulting in the expression of a nonfusogenic envelope [Virology (1998) 247, 137]. However, we show here that CLIV does not alter the status of Env cleavage at steady state. Using various aggregation/syncytium assays that allow us to discriminate between gp120/CD4 binding and binding followed by gp41-mediated fusion, we demonstrate that CLIV inhibits a step of the cell-to-cell fusion process after CD4 binding. We demonstrate also that CLIV binds at 37 degrees C to a single class of protein present at the CD4(+) cell surface (Scatchard analysis: K(d) = 8 nM; B(max) = 10(4) sites/cell) and that the fusion inhibition activity seems to correlate with binding to this proteic component. In contrast, CLIV interacts with neither membrane-inserted nor CD4-associated Env. We therefore propose that CLIV interferes after Env/CD4 binding with a step of the membrane fusion process that may involve the C-terminal domain of gp120.
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- 2000
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31. Active site mapping of yeast aspartyl-tRNA synthetase by in vivo selection of enzyme mutations lethal for cell growth
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Dino Moras, Alain Camasses, Laurent Ador, Jean Gangloff, Jean Cavarelli, Philippe Erbs, Gilbert Eriani, Architecture et réactivité de l'ARN (ARN), Centre National de la Recherche Scientifique (CNRS)-Université Louis Pasteur - Strasbourg I, Institut de Génétique Moléculaire de Montpellier (IGMM), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Transgene SA [Illkirch], Institut de génétique et biologie moléculaire et cellulaire (IGBMC), Université Louis Pasteur - Strasbourg I-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut de biologie moléculaire et cellulaire (IBMC), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Architecture et Réactivité de l'ARN (ARN), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), and Université Louis Pasteur - Strasbourg I-Centre National de la Recherche Scientifique (CNRS)
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Models, Molecular ,Protein Conformation ,[SDV]Life Sciences [q-bio] ,Mutant ,Aspartate-tRNA Ligase ,Genes, Fungal ,Saccharomyces cerevisiae ,Substrate Specificity ,Fungal Proteins ,03 medical and health sciences ,chemistry.chemical_compound ,Structure-Activity Relationship ,Structural Biology ,Anticodon ,Point Mutation ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Selection, Genetic ,Molecular Biology ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,RNA, Transfer, Asp ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Binding Sites ,biology ,Aminoacyl tRNA synthetase ,030302 biochemistry & molecular biology ,Active site ,Enzyme assay ,Yeast ,Complementation ,Enzyme ,Biochemistry ,chemistry ,Amino Acid Substitution ,Mutagenesis ,Transfer RNA ,biology.protein ,Genes, Lethal ,Sequence Analysis ,Cell Division ,Protein Binding - Abstract
The active site of yeast aspartyl-tRNA synthetase has been characterised by structural and functional approaches. However, residues or structural elements that indirectly contribute to the active site organisation have still to be described. They have not been assessed by simple analysis of structural data or site-directed mutagenesis analysis, since rational targetting has proven difficult. Here, we attempt to locate these functional features by using a genetic selection method to screen a randomly mutated yeast AspRS library for mutations lethal for cell growth. This approach is an efficient method to map the active site residues, since of the 23 different mutations isolated, 13 are in direct contact with the substrates. Most of the mutations are located in a 15 A radius sphere around the ATP molecule, where they affect the very conserved residues of the class-defining motifs. The results also showed the importance of the dimer interface for the enzyme activity: a single mutation of the invariant proline residue of motif 1 led to a structural defect inactivating the enzyme. From in vivo complementation studies it appeared that the enzyme activity can be recovered by reconstitution of an intact interface through the formation of heterodimers. We also show that a single mutation affecting an interaction with G34 of the tRNA can inactivate the enzyme by inducing a relaxation of the tRNA recognition specificity. Finally, several mutants whose functional importance could not be assessed from the structural data were selected, demonstrating the importance of this type of approach in the context of a structure-function relationship study.
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- 1999
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32. Expression of heterologous genes in Mycobacterium bovis BCG: induction of a cellular response against HIV-1 Nef protein
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Marie Paule Kieny, Nathalie Winter, J. Timm, Brigitte Gicquel, Jean Rauzier, B. Guy, M. Gheorghiu, Micheline Lagranderie, Claude Leclerc, Institut Pasteur [Paris], Biologie des Régulations Immunitaires, Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM), Transgene SA, Institut Pasteur [Paris] (IP), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), and ProdInra, Migration
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Operon ,PROLIFERATIVE RESPONSE ,T-Lymphocytes ,medicine.disease_cause ,Lymphocyte Activation ,Gene Products, nef ,RECOMBINANT DNA ,IMMUNOLOGY ,HEAT-SHOCK PROMOTER ,SEROPOSITIVE INDIVIDUALS ,Promoter Regions, Genetic ,0303 health sciences ,Mycobacterium bovis ,Immunity, Cellular ,General Medicine ,STREPTOMYCES-ALBUS ,Recombinant Proteins ,Streptomyces ,3. Good health ,Bacterial vaccine ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,GROES/GROEL1 OPERON ,Expression cassette ,Genetic Vectors ,Heterologous ,FORTUITUM ,VECTOR ,Biology ,Virus ,Microbiology ,Gene product ,03 medical and health sciences ,EXPRESSION CASSETTE ,Genetics ,medicine ,nef Gene Products, Human Immunodeficiency Virus ,PAL5000 ,Escherichia coli ,[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology ,030304 developmental biology ,ANTITUBERCULOSIS VACCINE ,030306 microbiology ,FOREIGN ANTIGEN ,BACTERIOPHAGE-LAMBDA ,biology.organism_classification ,Virology ,HIV-1 ,bacteria ,Lymph Nodes ,PLASMID - Abstract
International audience; Mycobacterium bovis bacillus Calmette-Guerin (BCG) has been used as a live bacterial vaccine to immunize more than two billion people against tuberculosis. In an attempt to use this vaccinal strain as a vehicle for protective antigens, the human immunodeficiency virus type 1 gene encoding the Nef protein was cloned in a mycobacteria-Escherichia coli shuttle plasmid and transferred into BCG. The nef gene was expressed under the control of an expression cassette carrying the promoter of the groES/groEL1 operon from Streptomyces albus and a synthetic ribosome-binding site. Lymph node cells from mice immunized with BCG-nef proliferated vigorously in response to purified Nef protein. This first report of a proliferative response suggests that recombinant BCG strains may be used to immunize against pathogens for which T-cell-mediated responses are important for protection.
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- 1991
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33. A vitamin D-based strategy overcomes chemoresistance in prostate cancer.
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Len-Tayon K, Beraud C, Fauveau C, Belorusova AY, Chebaro Y, Mouriño A, Massfelder T, Chauchereau A, Metzger D, Rochel N, and Laverny G
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- Male, Humans, Animals, Mice, Antineoplastic Agents pharmacology, Antineoplastic Agents therapeutic use, Cell Line, Tumor, Structure-Activity Relationship, Xenograft Model Antitumor Assays, Drug Resistance, Neoplasm drug effects, Vitamin D pharmacology, Vitamin D analogs & derivatives, Docetaxel pharmacology, Docetaxel therapeutic use, Prostatic Neoplasms, Castration-Resistant drug therapy, Prostatic Neoplasms, Castration-Resistant pathology, Prostatic Neoplasms, Castration-Resistant metabolism, Receptors, Calcitriol metabolism, Receptors, Calcitriol agonists
- Abstract
Background and Purpose: Castration-resistant prostate cancer (CRPC) is a common male malignancy that requires new therapeutic strategies due to acquired resistance to its first-line treatment, docetaxel. The benefits of vitamin D on prostate cancer (PCa) progression have been previously reported. This study aimed to investigate the effects of vitamin D on chemoresistance in CRPC., Experimental Approach: Structure function relationships of potent vitamin D analogues were determined. The combination of the most potent analogue and docetaxel was explored in chemoresistant primary PCa spheroids and in a xenograft mouse model derived from a patient with a chemoresistant CRPC., Key Results: Here, we show that Xe4MeCF3 is more potent than the natural ligand to induce vitamin D receptor (VDR) transcriptional activities and that it has a larger therapeutic window. Moreover, we demonstrate that VDR agonists restore docetaxel sensitivity in PCa spheroids. Importantly, Xe4MeCF3 reduces tumour growth in a chemoresistant CRPC patient-derived xenograft. In addition, this treatment targets signalling pathways associated with cancer progression in the remaining cells., Conclusion and Implications: Taken together, these results unravel the potency of VDR agonists to overcome chemoresistance in CRPC and open new avenues for the clinical management of PCa., (© 2024 The Author(s). British Journal of Pharmacology published by John Wiley & Sons Ltd on behalf of British Pharmacological Society.)
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- 2024
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34. Oncolytic viruses alter the biogenesis of tumor extracellular vesicles and influence their immunogenicity.
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Hirigoyen U, Guilbaud C, Krejbich M, Fouet M, Fresquet J, Arnaud B, Com E, Pineau C, Cadiou G, Burlaud-Gaillard J, Erbs P, Fradin D, Labarrière N, Fonteneau JF, Petithomme T, and Boisgerault N
- Abstract
Extracellular vesicles (EVs) are mediators of intercellular communication in the tumor microenvironment. Tumor EVs are commonly associated with metastasis, immunosuppression or drug resistance. Viral infections usually increase EV secretion, but little is known about the effect of oncolytic viruses (OVs) on tumor EVs. Here, we investigated the impact of oncolytic vesicular stomatitis virus (VSV) and vaccinia virus on EVs secreted by human melanoma and thoracic cancer cells. We found that OV infection increases the production of EVs by tumor cells. These EVs contain proteins of viral origin, such as VSV-G, thus creating a continuum of particles sharing markers of both canonical EVs and viruses. As such, the presence of VSV-G on EVs improves the transfer of their protein content to cell types commonly found in the tumor microenvironment. A proteomic analysis also revealed that EVs-OV secreted during VSV infection are enriched in immunity-related proteins. Finally, CD8
+ T cells incubated with EVs-OV from infected cells display slightly enhanced cytotoxic functions. Taken together, these data suggest that OVs enhance the communication mediated by tumor EVs, which could participate in the therapeutic efficacy of OVs. These results also provide rationale for engineering OVs to exploit EVs and disseminate therapeutic proteins within the tumor microenvironment., Competing Interests: P.E. is an employee of Transgene SA. Transgene SA is a member of the Institut Mérieux Group, a publicly traded French biopharmaceutical company., (© 2024 The Author(s).)- Published
- 2024
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35. TG6050, an oncolytic vaccinia virus encoding interleukin-12 and anti-CTLA-4 antibody, favors tumor regression via profound immune remodeling of the tumor microenvironment.
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Azar F, Deforges J, Demeusoit C, Kleinpeter P, Remy C, Silvestre N, Foloppe J, Fend L, Spring-Giusti C, Quéméneur E, and Marchand JB
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- Animals, Mice, Humans, Female, Macaca fascicularis, Antibodies, Monoclonal pharmacology, Antibodies, Monoclonal therapeutic use, Cell Line, Tumor, Oncolytic Virotherapy methods, Neoplasms therapy, Neoplasms immunology, Tumor Microenvironment, Interleukin-12, Vaccinia virus genetics, CTLA-4 Antigen antagonists & inhibitors, Oncolytic Viruses immunology
- Abstract
Background: TG6050 was designed as an improved oncolytic vector, combining the intrinsic properties of vaccinia virus to selectively replicate in tumors with the tumor-restricted expression of recombinant immune effectors to modify the tumor immune phenotype. These properties might be of particular interest for "cold" tumors, either poorly infiltrated or infiltrated with anergic T cells., Methods: TG6050, an oncolytic vaccinia virus encodes single-chain human interleukin-12 (hIL-12) and full-length anti-cytotoxic T-lymphocyte-associated antigen-4 (@CTLA-4) monoclonal antibody. The relevant properties of TG6050 (replication, cytopathy, transgenes expression and functionality) were extensively characterized in vitro . The biodistribution and pharmacokinetics of the viral vector, @CTLA-4 and IL-12, as well as antitumoral activities (alone or combined with immune checkpoint inhibitors) were investigated in several "hot" (highly infiltrated) and "cold" (poorly infiltrated) syngeneic murine tumor models. The mechanism of action was deciphered by monitoring both systemic and intratumoral immune responses, and by tumor transcriptome analysis. The safety of TG6050 after repeated intravenous administrations was evaluated in cynomolgus monkeys, with a focus on the level of circulating IL-12., Results: Multiplication and propagation of TG6050 in tumor cells in vitro and in vivo were associated with local expression of functional IL-12 and @CTLA-4. This dual mechanism translated into a strong antitumoral activity in both "cold" and "hot" tumor models (B16F10, LLC1 or EMT6, CT26, respectively) that was further amplified when combined with anti-programmed cell death protein-1. Analysis of changes in the tumor microenvironment (TME) after treatment with TG6050 showed increases in interferon-gamma, of CD8+T cells, and of M1/M2 macrophages ratio, as well as a drastic decrease of regulatory T cells. These local modifications were observed alongside bolstering a systemic and specific antitumor adaptive immune response. In toxicology studies, TG6050 did not display any observable adverse effects in cynomolgus monkeys., Conclusions: TG6050 effectively delivers functional IL-12 and @CTLA-4 into the tumor, resulting in strong antitumor activity. The shift towards an inflamed TME correlated with a boost in systemic antitumor T cells. The solid preclinical data and favorable benefit/risk ratio paved the way for the clinical evaluation of TG6050 in metastatic non-small cell lung cancer (NCT05788926 trial in progress)., Competing Interests: Competing interests: All authors were employees and shareholders of Transgene SA., (© Author(s) (or their employer(s)) 2024. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)
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- 2024
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36. 3D bioprinted CRC model brings to light the replication necessity of an oncolytic vaccinia virus encoding FCU1 gene to exert an efficient anti-tumoral activity.
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Marquette CA, Petiot E, Spindler A, Ebel C, Nzepa M, Moreau B, Erbs P, Balloul JM, Quemeneur E, and Zaupa C
- Abstract
The oncolytic virus represents a promising therapeutic strategy involving the targeted replication of viruses to eliminate cancer cells, while preserving healthy ones. Despite ongoing clinical trials, this approach encounters significant challenges. This study delves into the interaction between an oncolytic virus and extracellular matrix mimics (ECM mimics). A three-dimensional colorectal cancer model, enriched with ECM mimics through bioprinting, was subjected to infection by an oncolytic virus derived from the vaccinia virus (oVV). The investigation revealed prolonged expression and sustained oVV production. However, the absence of a significant antitumor effect suggested that the virus's progression toward non-infected tumoral clusters was hindered by the ECM mimics. Effective elimination of tumoral cells was achieved by introducing an oVV expressing FCU1 (an enzyme converting the prodrug 5-FC into the chemotherapeutic compound 5-FU) alongside 5-FC. Notably, this efficacy was absent when using a non-replicative vaccinia virus expressing FCU1. Our findings underscore then the crucial role of oVV proliferation in a complex ECM mimics. Its proliferation facilitates payload expression and generates a bystander effect to eradicate tumors. Additionally, this study emphasizes the utility of 3D bioprinting for assessing ECM mimics impact on oVV and demonstrates how enhancing oVV capabilities allows overcoming these barriers. This showcases the potential of 3D bioprinting technology in designing purpose-fit models for such investigations., Competing Interests: Author AS, CE, MN, BM, PE, J-MB, EQ and CZ were employed by company Transgene SA. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Marquette, Petiot, Spindler, Ebel, Nzepa, Moreau, Erbs, Balloul, Quemeneur and Zaupa.)
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- 2024
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37. Mediation of antitumor activity by AZD4820 oncolytic vaccinia virus encoding IL-12.
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Kurokawa C, Agrawal S, Mitra A, Galvani E, Burke S, Varshine A, Rothstein R, Schifferli K, Monks NR, Foloppe J, Silvestre N, Quemeneur E, Demeusoit C, Kleinpeter P, Sapra P, Barrett C, Hammond SA, Kelly EJ, Laliberte J, Durham NM, Oberst M, and Broggi MAS
- Abstract
Oncolytic viruses are engineered to selectively kill tumor cells and have demonstrated promising results in early-phase clinical trials. To further modulate the innate and adaptive immune system, we generated AZD4820, a vaccinia virus engineered to express interleukin-12 (IL-12), a potent cytokine involved in the activation of natural killer (NK) and T cells and the reprogramming of the tumor immune microenvironment. Testing in cultured human tumor cell lines demonstrated broad in vitro oncolytic activity and IL-12 transgene expression. A surrogate virus expressing murine IL-12 demonstrated antitumor activity in both MC38 and CT26 mouse syngeneic tumor models that responded poorly to immune checkpoint inhibition. In both models, AZD4820 significantly upregulated interferon-gamma (IFN-γ) relative to control mice treated with oncolytic vaccinia virus (VACV)-luciferase. In the CT26 study, 6 of 10 mice had a complete response after treatment with AZD4820 murine surrogate, whereas control VACV-luciferase-treated mice had 0 of 10 complete responders. AZD4820 treatment combined with anti-PD-L1 blocking antibody augmented tumor-specific T cell immunity relative to monotherapies. These findings suggest that vaccinia virus delivery of IL-12, combined with immune checkpoint blockade, elicits antitumor immunity in tumors that respond poorly to immune checkpoint inhibitors., Competing Interests: At the time this study was conducted, C.K., S.A., A.M., E.G., S.B., A.V., R.R., K.S., N.R.M., P.S., C.B., S.A.H., E.J.K., J.L., N.M.D., M.O., and M.A.S.B. were employees of AstraZeneca, with stock ownership and/or stock options or interests in the company; and J.F., N.S., E.Q., C.D., and P.K. were employees and stockholders of Transgene SA. N.R.M is an employee of Ratio Therapeutics (Boston, MA)., (© 2024 The Author(s).)
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- 2024
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38. Design and selection of anti-PD-L1 single-domain antibody and tumor necrosis factor superfamily ligands for an optimal vectorization in an oncolytic virus.
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Remy C, Pintado E, Dunlop M, Schön S, Kleinpeter P, Rozanes H, Fend L, Brandely R, Geist M, Suhner D, Winter E, Silvestre N, Huguet C, Fitzgerald P, Quéméneur E, and Marchand JB
- Abstract
Arming oncolytic viruses with transgenes encoding immunomodulators improves their therapeutic efficacy by enhancing and/or sustaining the innate and adaptive anti-tumoral immune responses. We report here the isolation, selection, and vectorization of a blocking anti-human PDL1 single-domain antibody (sdAb) isolated from PDL1-immunized alpacas. Several formats of this sdAb were vectorized into the vaccinia virus (VV) and evaluated for their programmed cell death protein 1 (PD1)/PD1 ligand (PDL1) blocking activity in the culture medium of tumor cells infected in vitro . In those conditions, VV-encoded homodimeric sdAb generated superior PDL1 blocking activity compared to a benchmark virus encoding full-length avelumab. The sdAb was further used to design simple, secreted, and small tumor necrosis factor superfamily (TNFSF) fusions with the ability to engage their cognate receptors (TNFRSF) only in the presence of PDL1-positive cells. Finally, PDL1-independent alternatives of TNFRSF agonists were also constructed by fusing different variants of surfactant protein-D (SP-D) oligomerization domains with TNFSF ectodomains. An optimal SP-D-CD40L fusion with an SP-D collagen domain reduced by 80% was identified by screening with a transfection/infection method where poxvirus transfer plasmids and vaccinia virus were successively introduced into the same cell. However, once vectorized in VV, this construct had a much lower CD40 agonist activity compared to the SP-D-CD40L construct, which is completely devoid of the collagen domain that was finally selected. This latest result highlights the importance of working with recombinant viruses early in the payload selection process. Altogether, these results bring several complementary solutions to arm oncolytic vectors with powerful immunomodulators to improve their immune-based anti-tumoral activity., Competing Interests: Authors CR, EP, PK, HR, LF, RB, MG, CR, DS, EW, NS, EQ, and J-BM were employed by the company Transgene SA. MD, SS, CH, and PF were employed by the company Randox Laboratories Ltd., (Copyright © 2023 Remy, Pintado, Dunlop, Schön, Kleinpeter, Rozanes, Fend, Brandely, Geist, Suhner, Winter, Silvestre, Huguet, Fitzgerald, Quéméneur and Marchand.)
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- 2023
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39. Patient-Derived Tumoroid for the Prediction of Radiotherapy and Chemotherapy Responses in Non-Small-Cell Lung Cancer.
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Nounsi A, Seitlinger J, Ponté C, Demiselle J, Idoux-Gillet Y, Pencreach E, Beau-Faller M, Lindner V, Balloul JM, Quemeneur E, Burckel H, Noël G, Olland A, Fioretti F, Falcoz PE, Benkirane-Jessel N, and Hua G
- Abstract
Radiation therapy and platinum-based chemotherapy are common treatments for lung cancer patients. Several factors are considered for the low overall survival rate of lung cancer, such as the patient's physical state and the complex heterogeneity of the tumor, which leads to resistance to the treatment. Consequently, precision medicines are needed for the patients to improve their survival and their quality of life. Until now, no patient-derived tumoroid model has been reported to predict the efficiency of radiation therapy in non-small-cell lung cancer. Using our patient-derived tumoroid model, we report that this model could be used to evaluate the efficiency of radiation therapy and cisplatin-based chemotherapy in non-small-cell lung cancer. In addition, these results can be correlated to clinical outcomes of patients, indicating that this patient-derived tumoroid model can predict the response to radiotherapy and chemotherapy in non-small-cell lung cancer.
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- 2023
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40. Intravenous injection of a novel viral immunotherapy encoding human interleukin-7 in nonhuman primates is safe and increases absolute lymphocyte count.
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Coupet CA, Dubois C, Evlachev A, Kehrer N, Baldazza M, Hofman S, Vierboom M, Martin P, and Inchauspe G
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- Humans, Mice, Animals, Immunotherapy, Lymphocyte Count, Macaca fascicularis, Interleukin-7 genetics, Vaccinia virus
- Abstract
Persistence of an immunosuppression, affecting both the innate and adaptive arms of the immune system, plays a role in sepsis patients' morbidity and late mortality pointing to the need for broad and effective immune interventions. MVA-hIL-7-Fc is a non-replicative recombinant Modified Vaccinia virus Ankara encoding the human interleukin-7 fused to human IgG2 Fc fragment. We have shown in murine sepsis models the capacity of this new virotherapy to stimulate both arms of the immune system and increase survival. Herein, an exploratory study in nonhuman primates was performed following a single intravenous injection of the MVA-hIL-7-Fc used at the clinical dose to assess its safety and biological activities. Four cynomolgus macaques were followed for 3 weeks post-injection (p.i), without observed acute adverse reactions. Circulating hIL-7-Fc was detected during the first 3-5 days p.i with a detection peaking at 12 h p.i. IL-7 receptor engagement and downstream signal transduction were detected in T cells demonstrating functionality of the expressed IL-7. Expansion of blood lymphocytes, mainly CD4 and CD8 naïve and central memory T cells, was observed on day 7 p.i. together with a transient increase of Ki67 expression on T lymphocytes. In addition, we observed an increase in circulating B and NK cells as well as monocytes were albeit with different kinetics and levels. This study indicates that a vectorized IL-7-Fc, injected by intravenous route at a relevant clinical dose in a large animal model, is active without adverse reactions supporting the clinical development of this novel virotherapy for treatment of sepsis patients.
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- 2022
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41. Direct imaging and automatic analysis in tumor-on-chip reveal cooperative antitumoral activity of immune cells and oncolytic vaccinia virus.
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Mencattini A, Lansche C, Veith I, Erbs P, Balloul JM, Quemeneur E, Descroix S, Mechta-Grigoriou F, Zalcman G, Zaupa C, Parrini MC, and Martinelli E
- Subjects
- Humans, Tumor Microenvironment, Vaccinia virus, Biosensing Techniques, Neoplasms therapy, Oncolytic Virotherapy methods, Oncolytic Viruses
- Abstract
Organ-on-chip and tumor-on-chip microfluidic cell cultures represent a fast-growing research field for modelling organ functions and diseases, for drug development, and for promising applications in personalized medicine. Still, one of the bottlenecks of this technology is the analysis of the huge amount of bio-images acquired in these dynamic 3D microenvironments, a task that we propose to achieve by exploiting the interdisciplinary contributions of computer science and electronic engineering. In this work, we apply this strategy to the study of oncolytic vaccinia virus (OVV), an emerging agent in cancer immunotherapy. Infection and killing of cancer cells by OVV were recapitulated and directly imaged in tumor-on-chip. By developing and applying appropriate image analysis strategies and advanced automatic algorithms, we uncovered synergistic cooperation of OVV and immune cells to kill cancer cells. Moreover, we observed that the kinetics of immune cells were modified in presence of OVV and that these immune modulations varied during the course of infection. A correlation between cancer cell infection and cancer-immune interaction time was pointed out, strongly supporting a cause-effect relationship between infection of cancer cells and their recognition by the immune cells. These results shed new light on the mode of action of OVV, and suggest new clinical avenues for immunotherapy developments., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2022
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42. A novel virotherapy encoding human interleukin-7 improves ex vivo T lymphocyte functions in immunosuppressed patients with septic shock and critically ill COVID-19.
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Crausaz M, Monneret G, Conti F, Lukaszewicz AC, Marchand JB, Martin P, Inchauspé G, and Venet F
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- Animals, Critical Illness, Cytokines metabolism, Humans, Interleukin-7 metabolism, Mice, Receptors, Antigen, T-Cell metabolism, STAT5 Transcription Factor metabolism, COVID-19 therapy, Sepsis therapy, Shock, Septic
- Abstract
A majority of patients with sepsis surviving the first days in intensive care units (ICU) enter a state of immunosuppression contributing to their worsening. A novel virotherapy based on the non-propagative Modified Virus Ankara (MVA) expressing the human interleukin-7 (hIL-7) cytokine fused to an Fc fragment, MVA-hIL-7-Fc, was developed and shown to enhance innate and adaptive immunity and confer survival advantages in murine sepsis models. Here, we assessed the capacity of hIL-7-Fc produced by the MVA-hIL-7-Fc to improve ex vivo T lymphocyte functions from ICU patients with sepsis. Primary hepatocytes were transduced with the MVA-hIL-7-Fc or an empty MVA, and cell supernatants containing the secreted hIL-7-Fc were harvested for in vitro and ex vivo studies. Whole blood from ICU patients [septic shock = 15, coronavirus disease 2019 (COVID-19) = 30] and healthy donors (n = 36) was collected. STAT5 phosphorylation, cytokine production, and cell proliferation were assessed upon T cell receptor (TCR) stimulation in presence of MVA-hIL-7-Fc-infected cell supernatants. Cells infected by MVA-hIL-7-Fc produced a dimeric, glycosylated, and biologically active hIL-7-Fc. Cell supernatants containing the expressed hIL-7-Fc triggered the IL-7 pathway in T lymphocytes as evidenced by the increased STAT5 phosphorylation in CD3+ cells from patients and healthy donors. The secreted hIL-7-Fc improved Interferon-γ (IFN-γ) and/or Tumor necrosis factor-α (TNF-α) productions and CD4+ and CD8+ T lymphocyte proliferation after TCR stimulation in patients with bacterial and viral sepsis. This study demonstrates the capacity of the novel MVA-hIL-7-Fc-based virotherapy to restore ex vivo T cells immune functions in ICU patients with sepsis and COVID-19, further supporting its clinical development., Competing Interests: MC, J-BM, PM, and GI were employees of Transgene SA when the work was performed. Transgene SA is a publicly traded French biopharmaceutical company, with Institut Merieux as the major shareholder. MC, GM, FC and A-CL work at EA7426, a joint unit including University, Hospital and bioMérieux, but are not employed by bioMérieux. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The authors declare that this study received funding from Transgene SA. The funder had the following involvement with the study: collection of data, analysis, interpretation of data and writing of the article., (Copyright © 2022 Crausaz, Monneret, Conti, Lukaszewicz, Marchand, Martin, Inchauspé and Venet.)
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- 2022
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43. Viral Delivery of IL-7 Is a Potent Immunotherapy Stimulating Innate and Adaptive Immunity and Confers Survival in Sepsis Models.
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Lélu K, Dubois C, Evlachev A, Crausaz M, Baldazza M, Kehrer N, Brandely R, Schlesinger Y, Silvestre N, Marchand JB, Bastien B, Leung-Theung-Long S, Unsinger J, Martin P, and Inchauspé G
- Subjects
- Adaptive Immunity, Animals, Immunity, Innate, Immunologic Factors, Immunotherapy, Mice, T-Lymphocytes, Vaccinia virus, Interleukin-7, Sepsis therapy
- Abstract
Persistence of an immunosuppressive state plays a role in septic patient morbidity and late mortality. Both innate and adaptive pathways are impaired, pointing toward the need for immune interventions targeting both arms of the immune system. We developed a virotherapy using the nonpropagative modified vaccinia virus Ankara (MVA), which harbors the intrinsic capacity to stimulate innate immunity, to deliver IL-7, a potent activator of adaptive immunity. The rMVA-human IL-7 (hIL-7)-Fc encoding the hIL-7 fused to the human IgG2-Fc was engineered and shown to express a dimeric, glycosylated, and biologically active cytokine. Following a single i.v. injection in naive mice, the MVA-hIL-7-Fc increased the number of total and activated B, T, and NK cells but also myeloid subpopulations (Ly6C
high , Ly6Cint , and Ly6Cneg cells) in both lung and spleen. It triggered differentiation of T cells in central memory, effector memory, and acute effector phenotypes and enhanced polyfunctionality of T cells, notably the number of IFN-γ-producing cells. The MVA vector contributed significantly to immune cell activation, particularly of NK cells. The MVA-hIL-7-Fc conferred a significant survival advantage in the cecal ligation and puncture (CLP) and Candida albicans sepsis models. It significantly increased cell numbers and activation in both spleen and lung of CLP mice. Comparatively, in naive and CLP mice, the rhIL-7-Fc soluble counterpart overall induced less vigorous, shorter lasting, and narrower immune activities than did the MVA-hIL-7-Fc and favored TNF-α-producing cells. The MVA-hIL-7-Fc represents a novel class of immunotherapeutic with clinical potential for treatment of septic patients., (Copyright © 2022 by The American Association of Immunologists, Inc.)- Published
- 2022
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44. Vascularization of Patient-Derived Tumoroid from Non-Small-Cell Lung Cancer and Its Microenvironment.
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Seitlinger J, Nounsi A, Idoux-Gillet Y, Santos Pujol E, Lê H, Grandgirard E, Olland A, Lindner V, Zaupa C, Balloul JM, Quemeneur E, Massard G, Falcoz PE, Hua G, and Benkirane-Jessel N
- Abstract
Patient-derived tumoroid (PDT) has been developed and used for anti-drug screening in the last decade. As compared to other existing drug screening models, a PDT-based in vitro 3D cell culture model could preserve the histological and mutational characteristics of their corresponding tumors and mimic the tumor microenvironment. However, few studies have been carried out to improve the microvascular network connecting the PDT and its surrounding microenvironment, knowing that poor tumor-selective drug transport and delivery is one of the major reasons for both the failure of anti-cancer drug screens and resistance in clinical treatment. In this study, we formed vascularized PDTs in six days using multiple cell types which maintain the histopathological features of the original cancer tissue. Furthermore, our results demonstrated a vascular network connecting PDT and its surrounding microenvironment. This fast and promising PDT model opens new perspectives for personalized medicine: this model could easily be used to test all therapeutic treatments and could be connected with a microfluidic device for more accurate drug screening.
- Published
- 2022
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45. Pseudocowpox virus, a novel vector to enhance the therapeutic efficacy of antitumor vaccination.
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Ramos RN, Tosch C, Kotsias F, Claudepierre MC, Schmitt D, Remy-Ziller C, Hoffmann C, Ricordel M, Nourtier V, Farine I, Laruelle L, Hortelano J, Spring-Giusti C, Sedlik C, Le Tourneau C, Hoffmann C, Silvestre N, Erbs P, Bendjama K, Thioudellet C, Quemeneur E, Piaggio E, and Rittner K
- Abstract
Objective: Antitumor viral vaccines, and more particularly poxviral vaccines, represent an active field for clinical development and translational research. To improve the efficacy and treatment outcome, new viral vectors are sought, with emphasis on their abilities to stimulate innate immunity, to display tumor antigens and to induce a specific T-cell response., Methods: We screened for a new poxviral backbone with improved innate and adaptive immune stimulation using IFN-α secretion levels in infected PBMC cultures as selection criteria. Assessment of virus effectiveness was made in vitro and in vivo ., Results: The bovine pseudocowpox virus (PCPV) stood out among several poxviruses for its ability to induce significant secretion of IFN-α. PCPV produced efficient activation of human monocytes and dendritic cells, degranulation of NK cells and reversed MDSC-induced T-cell suppression, without being offensive to activated T cells. A PCPV-based vaccine, encoding the HPV16 E7 protein (PCPV-E7), stimulated strong antigen-specific T-cell responses in TC1 tumor-bearing mice. Complete regression of tumors was obtained in a CD8
+ T-cell-dependent manner after intratumoral injection of PCPV-E7, followed by intravenous injection of the cancer vaccine MVA-E7. PCPV also proved active when injected repeatedly intratumorally in MC38 tumor-bearing mice, generating tumor-specific T-cell responses without encoding a specific MC38 antigen. From a translational perspective, we demonstrated that PCPV-E7 effectively stimulated IFN-γ production by T cells from tumor-draining lymph nodes of HPV+ -infected cancer patients., Conclusion: We propose PCPV as a viral vector suitable for vaccination in the field of personalised cancer vaccines, in particular for heterologous prime-boost regimens., Competing Interests: All authors except RR, FK, CS, CLT, CaH and EP are employees of Transgene. Institute Curie employees RR, FK and EP receive funding from Transgene., (© 2022 Transgene SA. Clinical & Translational Immunology published by John Wiley & Sons Australia, Ltd on behalf of Australian and New Zealand Society for Immunology, Inc.)- Published
- 2022
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46. Vectorized Treg-depleting αCTLA-4 elicits antigen cross-presentation and CD8 + T cell immunity to reject 'cold' tumors.
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Semmrich M, Marchand JB, Fend L, Rehn M, Remy C, Holmkvist P, Silvestre N, Svensson C, Kleinpeter P, Deforges J, Junghus F, Cleary KL, Bodén M, Mårtensson L, Foloppe J, Teige I, Quéméneur E, and Frendéus B
- Subjects
- Animals, CD8-Positive T-Lymphocytes, Cell Line, Tumor, Humans, Immune Checkpoint Inhibitors pharmacology, Male, Mice, Antigen Presentation immunology, CTLA-4 Antigen metabolism, Immune Checkpoint Inhibitors therapeutic use, T-Lymphocytes, Regulatory immunology
- Abstract
Background: Immune checkpoint blockade (ICB) is a clinically proven concept to treat cancer. Still, a majority of patients with cancer including those with poorly immune infiltrated 'cold' tumors are resistant to currently available ICB therapies. Cytotoxic T lymphocyte-associated antigen-4 (CTLA-4) is one of few clinically validated targets for ICB, but toxicities linked to efficacy in approved αCTLA-4 regimens have restricted their use and precluded full therapeutic dosing. At a mechanistic level, accumulating preclinical and clinical data indicate dual mechanisms for αCTLA-4; ICB and regulatory T cell (Treg) depletion are both thought to contribute efficacy and toxicity in available, systemic, αCTLA-4 regimens. Accordingly, strategies to deliver highly effective, yet safe αCTLA-4 therapies have been lacking. Here we assess and identify spatially restricted exposure to a novel strongly Treg-depleting, checkpoint-blocking, vectorized αCTLA-4, as a highly efficacious and potentially safe strategy to target CTLA-4., Methods: A novel human IgG1 CTLA-4 antibody (4-E03) was identified using function-first screening for monoclonal antibodies (mAbs) and targets associated with superior Treg-depleting activity. A tumor-selective oncolytic vaccinia vector was then engineered to encode this novel, strongly Treg-depleting, checkpoint-blocking, αCTLA-4 antibody or a matching surrogate antibody, and Granulocyte-macrophage colony-stimulating factor (GM-CSF) (VV
GM -αCTLA-4)., Results: The identified 4-E03 antibody showed significantly stronger Treg depletion, but equipotent checkpoint blockade, compared with clinically validated αCTLA-4 ipilimumab against CTLA-4-expressing Treg cells in a humanized mouse model in vivo. Intratumoral administration of VVGM -αCTLA-4 achieved tumor-restricted CTLA-4 receptor saturation and Treg depletion, which elicited antigen cross-presentation and stronger systemic expansion of tumor-specific CD8+ T cells and antitumor immunity compared with systemic αCTLA-4 antibody therapy. Efficacy correlated with FcγR-mediated intratumoral Treg depletion. Remarkably, in a clinically relevant mouse model resistant to systemic ICB, intratumoral VVGM -αCTLA-4 synergized with αPD-1 to reject cold tumors., Conclusion: Our findings demonstrate in vivo proof of concept for spatial restriction of Treg depletion-optimized immune checkpoint blocking, vectorized αCTLA-4 as a highly effective and safe strategy to target CTLA-4. A clinical trial evaluating intratumoral VVGM -αhCTLA-4 (BT-001) alone and in combination with αPD-1 in metastatic or advanced solid tumors has commenced., Competing Interests: Competing interests: MS, MR, PH, LM, CS, FJ, MB, IT, and BF are employees, MS, MR, LM, FJ, MB, IT, and BF are shareholders of BioInvent International. KLC received funding from BioInvent. J-BM, LF, CR, NS, PK, JD, JF, and EQ are employees and shareholders of Transgene., (© Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)- Published
- 2022
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47. Correlation of HPV16 Gene Status and Gene Expression With Antibody Seropositivity and TIL Status in OPSCC.
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von Witzleben A, Currall E, Wood O, Chudley L, Akinyegun O, Thomas J, Bendjama K, Thomas GJ, Friedmann PS, King EV, Laban S, and Ottensmeier CH
- Abstract
Introduction: Human papillomavirus 16 (HPV16) is the main cause of oropharyngeal squamous cell carcinoma (OPSCC). To date, the links between HPV16 gene expression and adaptive immune responses have not been investigated. We evaluated the correlation of HPV16 DNA, RNA transcripts and features of adaptive immune response by evaluating antibody isotypes against E2, E7 antigens and density of tumor-infiltrating lymphocytes (TIL)., Material and Methods: FFPE-tissue from 27/77 p16-positive OPSCC patients was available. DNA and RNA were extracted and quantified using qPCR for all HPV16 genes. The TIL status was assessed. Immune responses against E2 and E7 were quantified by ELISA (IgG, IgA, and IgM; 77 serum samples pre-treatment, 36 matched post-treatment)., Results: Amounts of HPV16 genes were highly correlated at DNA and RNA levels. RNA co-expression of all genes was detected in 37% (7/19). E7 qPCR results were correlated with higher anti-E7 antibody (IgG, IgA) level in the blood. Patients with high anti-E2 IgG antibody (>median) had better overall survival (p=0.0311); anti-E2 and anti-E7 IgA levels had no detectable effect. During the first 6 months after treatment, IgA but not IgG increased significantly, and >6 months both antibody classes declined over time. Patients with immune cell-rich tumors had higher levels of circulating antibodies against HPV antigens., Conclusion: We describe an HPV16 qPCR assay to quantify genomic and transcriptomic expression and correlate this with serum antibody levels against HPV16 oncoproteins. Understanding DNA/RNA expression, relationship to the antibody response in patients regarding treatment and outcome offers an attractive tool to improve patient care., Competing Interests: Author KB was employed by company Transgene SA. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 von Witzleben, Currall, Wood, Chudley, Akinyegun, Thomas, Bendjama, Thomas, Friedmann, King, Laban and Ottensmeier.)
- Published
- 2021
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48. Fluorescent Tagged Vaccinia Virus Genome Allows Rapid and Efficient Measurement of Oncolytic Potential and Discovery of Oncolytic Modulators.
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Gallardo F, Schmitt D, Brandely R, Brua C, Silvestre N, Findeli A, Foloppe J, Top S, Kappler-Gratias S, Quentin-Froignant C, Morin R, Lagarde JM, Bystricky K, Bertagnoli S, and Erbs P
- Abstract
As a live biologic agent, oncolytic vaccinia virus has the ability to target and selectively amplify at tumor sites. We have previously reported that deletion of thymidine kinase and ribonucleotide reductase genes in vaccinia virus can increase the safety and efficacy of the virus. Here, to allow direct visualization of the viral genome in living cells, we incorporated the ANCH target sequence and the OR3-Santaka gene in the double-deleted vaccinia virus. Infection of human tumor cells with ANCHOR3-tagged vaccinia virus enables visualization and quantification of viral genome dynamics in living cells. The results show that the ANCHOR technology permits the measurement of the oncolytic potential of the double deleted vaccinia virus. Quantitative analysis of infection kinetics and of viral DNA replication allow rapid and efficient identification of inhibitors and activators of oncolytic activity. Our results highlight the potential application of the ANCHOR technology to track vaccinia virus and virtually any kind of poxvirus in living cells.
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- 2020
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49. Evaluation of heterologous prime-boost vaccination strategies using chimpanzee adenovirus and modified vaccinia virus for TB subunit vaccination in rhesus macaques.
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Vierboom MPM, Chenine AL, Darrah PA, Vervenne RAW, Boot C, Hofman SO, Sombroek CC, Dijkman K, Khayum MA, Stammes MA, Haanstra KG, Hoffmann C, Schmitt D, Silvestre N, White AG, Borish HJ, Seder RA, Ouaked N, Leung-Theung-Long S, Inchauspé G, Anantha R, Limbach M, Evans TG, Casimiro D, Lempicki M, Laddy DJ, Bonavia A, and Verreck FAW
- Abstract
Tuberculosis (TB) still is the principal cause of death from infectious disease and improved vaccination strategies are required to reduce the disease burden and break TB transmission. Here, we investigated different routes of administration of vectored subunit vaccines based on chimpanzee-derived adenovirus serotype-3 (ChAd3) for homologous prime-boosting and modified vaccinia virus Ankara (MVA) for heterologous boosting with both vaccine vectors expressing the same antigens from Mycobacterium tuberculosis (Ag85B, ESAT6, Rv2626, Rv1733, RpfD). Prime-boost strategies were evaluated for immunogenicity and protective efficacy in highly susceptible rhesus macaques. A fully parenteral administration regimen was compared to exclusive respiratory mucosal administration, while parenteral ChAd3-5Ag prime-boosting and mucosal MVA-5Ag boosting were applied as a push-and-pull strategy from the periphery to the lung. Immune analyses corroborated compartmentalized responses induced by parenteral versus mucosal vaccination. Despite eliciting TB-specific immune responses, none of the investigational regimes conferred a protective effect by standard readouts of TB compared to non-vaccinated controls, while lack of protection by BCG underpinned the stringency of this non-human primate test modality. Yet, TB manifestation after full parenteral vaccination was significantly less compared to exclusive mucosal vaccination., Competing Interests: Competing interestsThe authors from the BPRC, University of Pittsburgh, and NIH have no competing interests. IAVI (transferred from Aeras 2018) holds the patent to the classical 5Ag cassette. A.B., R.A., D.J.L., and T.G.E. are listed as an inventor on a patent application originally filed by Aeras. GlaxoSmithKline Biologicals SA and Transgene are the respective developers of the investigational vaccines in this study. N.O. is an employee and shareholder of the GSK group of companies and is listed as an inventor on a patent application filed by the GSK group of companies. Remaining authors of Aeras and Transgene have no competing interests., (© The Author(s) 2020.)
- Published
- 2020
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50. Safety and immunogenicity of the therapeutic vaccine TG1050 in chronic hepatitis B patients: a phase 1b placebo-controlled trial.
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Zoulim F, Fournier C, Habersetzer F, Sprinzl M, Pol S, Coffin CS, Leroy V, Ma M, Wedemeyer H, Lohse AW, Thimme R, Lugardon K, Martin P, Bastien B, Sansas B, Adda N, Halluard C, Bendjama K, Brandely M, and Inchauspé G
- Subjects
- Adenoviridae, Animals, Antiviral Agents therapeutic use, Hepatitis B Surface Antigens, Humans, Immunogenicity, Vaccine, Mice, Hepatitis B, Chronic drug therapy, Vaccines therapeutic use
- Abstract
Treatment of chronic hepatitis B (CHB) typically requires life-long administration of drugs. Cohort and pre-clinical studies have established the link between a functional T-cell-mounted immunity and resolution of infection. TG1050 is an adenovirus 5-based vaccine that expresses HBV polymerase and domains of core and surface antigen and has shown immunogenicity and antiviral effects in mice. We performed a phase 1 clinical trial to assess safety and explore immunogenicity and early efficacy of TG1050 in CHB patients. This randomized, double blind, placebo-controlled study included two sequential phases: one single dose cohort (SD, n = 12) and one multiple (3) doses cohort (MD, n = 36). Patients, virally suppressed under nucleoside(d)tide analog NUC therapy, were randomized 1:1:1 across 3 dose levels (DL) and assigned to receive 10
9 , 1010 , 1011 virus particles (vp) of TG1050 and then randomized within each DL to placebo (3:1 and 9:3 vaccines/placebo in each DL, respectively, for the SD and MD cohorts). Cellular (ELISPOT) and antibody responses (anti-Adenovirus), as well as evolution of circulating HBsAg and HBcrAg, were monitored. All doses were well tolerated in both cohorts, without severe adverse event. TG1050 was capable to induce IFN-γ producing T-cells targeting 1 to 3 encoded antigens, in particular at the 1010 vp dose. Overall, minor decreases of HBsAg were observed while a number of vaccinees reached unquantifiable HBcrAg by end of the study. In CHB patients under NUC, TG1050 exhibited a good safety profile and was capable to induce HBV-specific cellular immune response. These data support further clinical evaluation, especially in combination studies.- Published
- 2020
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