3,594 results on '"T, Koike"'
Search Results
2. Developing an Integrated Flood Management Plan under climate change for Grand River North West River basin, Mauritius
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A. Kowlesser, M. Rasmy, and T. Koike
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
In this article, the catchment of Grand River North West (GRNW) in Mauritius was selected as a case study to develop an Integrated Flood Management Plan to address the flood risks that Mauritius is and will be facing due to climate change. The study contains three main components: (i) a climatology analysis for the past (2003–2018) and future climate (2025–2040) to assess the trends in floods under climate change, (ii) the development of a hydrological model to study the hydrological responses of the basin for extreme flooding events, and (iii) a GIS-based flood risk model to develop a risk map. The results show that extreme rainfall events exceeding 50 mm d−1 have a high likelihood of increasing. A flood vulnerability map for the basin was developed based on nine indicators to aid decision making at the village council area (VCA) level and guide financial investments flood mitigation measures. The study established a novel end-to-end approach to develop an Integrated Flood Management Plan based on a case study for a river basin in Mauritius.
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- 2024
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3. Developing a flood monitoring system by utilizing real-time satellite rainfall estimates and water energy budget-based rainfall-runoff inundation model in West Africa
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A. W. Mohamed Rasmy, M. Gusyev, K. Tamakawa, M. Ohara, and T. Koike
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
The African regions have been affected by frequent flood-related disasters. To support decision-makers in flood disaster management, a real-time flood monitoring system was established in the Niger and Volta basins under the Water disaster platform to enhance climate resilience in Africa (WADiRE-Africa). To bridge a gap between data unavailability and inaccessibility, the near-real-time satellite rainfall data (GSMaP-NRT) was evaluated and found to have a very low correlation () with gauge data at daily scales and a higher correlation (>0.7) at monthly scales. The statistically bias-corrected GSMaP-NRT data was used in the Water and Energy Budget-based Rainfall-Runoff-Inundation (WEB-RRI) model to generate hydrological responses of the basins. As the simulated river discharges were overestimated, an additional correction method was employed for the GSMaP-NRT data to match well with observed discharges. The prototype system provides real-time flood information in both basins.
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- 2024
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4. Preface: ICFM9 – River Basin Disaster Resilience and Sustainability by All
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T. Koike, S. Egashira, M. Ohara, A. W. M. Rasmy, T. Ushiyama, M. Miyamoto, D. Harada, K. Naito, C. Cudennec, and S. Fischer
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Published
- 2025
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5. Multiple chiral doublet bands in 104Rh
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A. Krakó, D. Sohler, J. Timár, I. Kuti, Q.B. Chen, S.Q. Zhang, J. Meng, K. Starosta, T. Koike, E.S. Paul, D.B. Fossan, and C. Vaman
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Physics ,QC1-999 - Abstract
Two new negative-parity bands have been identified in the odd-odd 104Rh nucleus. According to their experimentally observed properties, they have the same π(1g9/2)−1⊗ν(1h11/2)1 high-j configuration as the previously known negative-parity chiral doublet bands. This observation raises the possibility of the existence of multiple chiral doublet bands, MχD, in this nucleus. Comparing the properties of the observed bands with results of detailed theoretical calculations, one can conclude that the lower energy parts of bands 1 and 2 are chiral partner bands with the π(1g9/2)−1⊗ν(1h11/2)1 two-quasiparticle configuration, while bands 3 and 4 are chiral partner bands with the π(1g9/2)−1⊗ν(1g7/2)−2(1h11/2)1 four-quasiparticle configuration. Thus, MχD based on different configurations is observed in 104Rh.
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- 2024
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6. Study on a flood damage reduction countermeasure by installing a spillway on a riverine levee for promoting the initiative of River Basin Disaster Resilience and Sustainability by All
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O. Itagaki, M. Ohara, and T. Koike
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
In light of the frequent occurrence of unprecedented heavy rains and floods attributable to climate change effects, the importance of the “River Basin Disaster Resilience and Sustainability by All” initiative is being emphasized and promoted strongly in Japan. For promoting discussions on a wide range of countermeasures for flood damage reduction by the initiative, this paper presents a trial estimation result of quantitative flood damage reduction effect by spillway installation on a riverine levee in a protected area where severe flood disasters have occurred in recent years. The result shows that the countermeasure considerably reduce the flooded area, the days required for drainage, and house flood depths. Results also indicate that the average annual damage to paddy fields in the area can be expected to decrease, although the inundation frequency will increase.
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- 2024
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7. Attributing weather patterns to Davao River extreme rainfall from Reanalysis and GCM
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R. A. Acierto, T. Ushiyama, and T. Koike
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
Extreme rainfall or heavy rainfall events (HREs) causes significant socio-economic damages annually affecting local development especially in developing countries. Thus, assessing changes in frequency and magnitude of HREs under climate change using global climate model (GCM) projections became ubiquitous to hydrological impact studies. Here, we present a framework for evaluating GCM's ability in reproducing the seasonal frequency of HREs in Davao River basin and the associated weather patterns that led to HREs. Our results show that HREs in MRI-AGCM 3.2S occurred 81 % in DJF and 4 % in JJA, which showed over(under) estimation bias during DJF(JJA) season compared to ERA5 HREs that show occurrence of 50 % in DJF and 18 % in JJA. Furthermore, we examined the weather pattern and anomalies that led to anomalous conditions of the season specific HREs in Davao River basin, which showed MRI-AGCM3.2S was able to reproduce the general structure of anomalous conditions fairly well on both seasons in comparison with ERA5. However, the slight over(under)estimation of the surface anomalous conditions in DJF(JJA) are directly proportional to the over(under)estimation in rainfall magnitude in the basin.
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- 2024
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8. Evaluation of satellite precipitation products for real-time extreme river flow modeling in data scarce regions
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M. G. Tedla, M. Rasmy, T. Koike, and L. Zhou
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
Inadequacy of spatio-temporal hydro-climatic data limits the efficacy of hazard monitoring and disaster risk reduction activities in disaster-prone areas. Various satellite missions are recently providing climate data, but prior evaluation and enhancement of these data are necessary for a reliable application. In this study, we conducted performance evaluation and enhancement of three real-time satellite precipitation products (SPPs) (GSMaP, GPM-IMERG, and PERSIANN) for flood modeling in the Blue Nile basin. The bias correction improved the original SPPs, with the largest improvement being for factors generated from 10 d mean data. Flood event hydrograph indicated satisfactory results of error metrics on the devastating flood event of 2012. Employing reliable physical–based distributed hydrologic models provided longer lead time and high-accuracy flood simulation. Furthermore, the results indicate that integrating available initial observed precipitation data improved the efficiency of SPPs simulation, and hence are applicable in operational flood monitoring.
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- 2024
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9. Detection of Nematophagous Fungi from Heterodera schachtii Females Using a Baiting Experiment with Soils Cropped to Brassica Species from California’s Central Coast
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Ying-Yu Chen, Steven T. Koike, Geoffrey D. Logan, Christopher Drozd, Juliana De Oliveira Silva, Nicole B. Colindres, Beth B. Peacock, Jennifer Smith Becker, Angelo Loffredo, Haiyan Wu, Paul M. Ruegger, J. Ole Becker, and James Borneman
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Hyalorbilia oviparasitica ,Dactylella oviparasitica ,Brachyphoris oviparasitica ,Hyalorbilia aff. multiguttulata ,sugarbeet cyst nematode ,suppressive soils ,Plant culture ,SB1-1110 ,Botany ,QK1-989 - Abstract
Until the early 1990s, cyst nematodes were abundant pathogens in fields where hosts of Heterodera spp. were frequent members of crop rotations along California’s Central Coast. To mitigate damage caused by Heterodera schachtii and H. cruciferae, the soil fumigant 1,3-dichloropropene (1,3-D) was used by more than 43% of surveyed broccoli growers. Over the last few decades, use of 1,3-D and other nematicides has dramatically diminished, suggesting a decline in nematode disease pressure. The goal of this study was to examine the hypothesis that increased population densities of nematophagous fungi contribute to the low populations of Heterodera spp. in fields frequently cropped to their hosts. In 2016, soil samples were collected from 152 Brassica fields with a broad geographical distribution, from Santa Barbara County to Santa Cruz County. The average number of Heterodera cysts per 250 cm3 of soil ranged from 0.5 to 27.5, with 62% of the soils harboring no detectable cyst nematodes and only a few samples reaching a potentially damaging threshold level. A baiting experiment with H. schachtii and cabbage was performed in a greenhouse to detect nematophagous fungi associated with nematode females as their posterior end emerged and became exposed to the soil’s rhizosphere. An Illumina-based sequence analysis of these H. schachtii females identified several known nematophagous fungi, including members of the Hyalorbilia oviparasitica clade, Pochonia chlamydosporia, certain Fusarium spp., and others. These soils clearly harbor a diverse population of hyperparasitic fungi that could be biologically suppressing cyst nematodes below a damaging threshold.[Figure: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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- 2021
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10. Multitactic Preplant Soil Fumigation with Allyl Isothiocyanate in Cut Flowers and Strawberry
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Mark Hoffmann, Husein A. Ajwa, Becky B. Westerdahl, Steven T. Koike, Mike Stanghellini, Cheryl Wilen, and Steven A. Fennimore
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combined fumigation ,soil disinfestation ,soil-borne pest management ,Plant culture ,SB1-1110 - Abstract
Allyl isothiocyanate (AITC) is a glucosinolate produced in cruciferous plant species. AITC is known to act as a pesticide on microorganisms, insects, and weeds. Synthetic AITC is registered as a biopesticide for agricultural soil treatment use in the United States and elsewhere in the world. Although a potent pesticide, reports on the weed and pathogen control efficacy of synthetic AITC applied as soil disinfectant are highly variable. Due to the low vapor pressure of AITC, questions remain as to whether pest and weed control efficacy can be improved by combining it with other chemicals. The objective of this study was to assess the control efficacy of AITC stand-alone applications vs. applications, in which AITC was combined with the standard-fumigants chloropicrin, 1,3-dichloropicrin, and methyl isothiocyanate. Two shank-applied on-farm field trials were conducted in cut flower [delphinium (Delphinium elatum), ranunculus (Ranunculus asiaticus)] fields, and two drip tape applied field trials in strawberry (Fragaria ×ananassa) fields in California. Weed pressure, weed seed viability, nematode survival, and pathogen survival of Pythium ultimum, fusarium wilt (Fusarium oxysporum), and verticillium wilt (Verticillium dahliae) were assessed. Cumulative yearly yield of marketable fruit was assessed in the strawberry field trials. The results of this study show that the use of AITC as a stand-alone treatment provided no consistent weed or pathogen control efficacy. However, our results also indicate that shank and drip applied multitactic fumigation approaches with AITC can efficiently control soil-borne diseases and weeds. These findings have potential implications, especially in those areas where certain fumigants are restricted due to regulations and/or availability.
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- 2020
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11. P1212: PERSONALIZED TREATMENT FOR ELDERLY PATIENTS WITH DIFFUSE LARGE B-CELL LYMPHOMA
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H. Nukariya, K. Miura, H. Takahashi, M. Nakagawa, T. Hamada, S. Itho, T. Ichinohe, T. Endo, K. Kurihara, T. Koike, K. Iizuka, S. Ohtake, U. Yoshihito, N. Iriyama, Y. Hatta, and H. Nakamura
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2022
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12. Can needle nitrogen content explain the interspecific difference in ozone sensitivities of photosynthesis between Japanese larch (Larix kaempferi) and Sakhalin fir (Abies sachalinensis)?
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T. SUGAI, M. KITAO, T. WATANABE, and T. KOIKE
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ozone ,deciduous ,evergreen ,interspecific differences ,photosynthetic nitrogen-use efficiency. ,Botany ,QK1-989 - Abstract
Although deciduous and evergreen conifers are expected to utilize needle nitrogen differently, their interspecific differences in the ozone sensitivity remain unclear. We compared the growth and physiological responses to elevated O3 concentrations in deciduous Japanese larch (Larix kaempferi) and evergreen Sakhalin fir (Abies sachalinensis) seedlings. Seedlings of both species were exposed to 62.5 ± 1.95 nmol(O3) mol-1 during the day time in open-top chambers. Elevated O3 had no effect on height or diameter growth in either of the species but suppressed photosynthetic parameters. A decline in photosynthetic nitrogen-use efficiency was observed in both species. However, needle N content in larch was decreased by O3, whereas it was not decreased in fir. Needle N responses to O3 were different between larch and fir seedlings, indicating that the O3 sensitivity of photosynthesis could vary depending on needle N dynamics. We also observed a higher correlation between photosynthesis and needle N even under O3 exposure, particularly in the mass-based relationship with higher accuracy. The result indicated that mass-based needle N could explain difference in O3 sensitivity of photosynthesis between the different leaf habits in larch and fir seedlings.
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- 2019
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13. The structure of low-lying 1− states in 90,94Zr from (α,α′γ) and (p,p′γ) reactions
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F.C.L. Crespi, A. Bracco, E.G. Lanza, A. Tamii, N. Blasi, F. Camera, O. Wieland, N. Aoi, D.L. Balabanski, S. Bassauer, A.S. Brown, M.P. Carpenter, J.J. Carroll, M. Ciemała, A. Czeszumska, P.J. Davies, V. Derya, L.M. Donaldson, Y.D. Fang, H. Fujita, G. Gey, H.T. Ha, M.N. Harakeh, T. Hashimoto, N. Ichige, E. Ideguchi, A. Inoue, J. Isaak, C. Iwamoto, D.G. Jenkins, T. Klaus, N. Kobayashi, T. Koike, M. Krzysiek, M.K. Raju, M. Liu, A. Maj, L. Morris, P. von Neumann Cosel, S. Noji, H.J. Ong, S.G. Pickstone, N. Pietralla, D. Savran, J.M. Schmitt, M. Spieker, G. Steinhilber, C. Sullivan, B. Wasilewska, M. Weinert, V. Werner, Y. Yamamoto, T. Yamamoto, R.G.T. Zegers, X. Zhou, S. Zhu, and A. Zilges
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Nuclear structure ,Dipole excitation around neutron threshold ,Inelastic scattering ,Physics ,QC1-999 - Abstract
The low-lying dipole strength in the 90,94Zr nuclei was investigated via (p,p′γ) at 80 MeV and (α,α′γ) at 130 MeV. The experiments, made at RCNP, used the magnetic spectrometer Grand Raiden for the scattered particles and the array CAGRA with HPGe detectors for the γ-decay. For 94Zr these are the first data for both reactions and for 90Zr these are the first data with (p,p′γ) and the first ones at high resolution for (α,α′γ). The comparison of the present results for the two nuclei with existing (γ,γ′) data shows that both nuclear probes produce an excitation pattern different than that of the electromagnetic probes.DWBA calculations were made using form factors deduced from transition densities, based on RPA calculations, characterized by a strong neutron component at the nuclear surface. A combined analysis of the two reactions was performed for the first time to investigate the isoscalar character of the 1− states in 90,94Zr. The (p,p′γ) cross section was calculated using values for the isoscalar electric dipole energy-weighted sum rule (E1 ISEWSR) obtained from the (α,α′γ) data. The isoscalar strength for 90Zr was found to exhaust 20 ± 2.5% of the EWSR in the energy range up to 12 MeV. In case of 94Zr, a strength of 9 ± 1.1% of the EWSR was found in the range up to 8.5 MeV.Although an overall general description was obtained in the studied energy intervals, not all proton cross sections were well reproduced using the isoscalar strength from (α,α′γ). This might suggest mixing of isoscalar and isovector components and that this mixing and the degree of collectivity are not the same for all the 1− states below the particle binding energy.
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- 2021
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14. Evaluation of the Relationship Between Equol Production and the Risk of Locomotive Syndrome in Very Elderly Women
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T. Koike, S. Yamamoto, T. Furui, C. Miyazaki, H. Ishikawa, and K.-I. Morishige
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Nutrition and Dietetics ,Food Animals ,Public Health, Environmental and Occupational Health ,Applied Microbiology and Biotechnology - Abstract
This study aimed to evaluate whether equol production status has an impact on the risk of locomotive syndrome in very elderly (≥85 years old) women. In this retrospective observational study, 116 very elderly women were recruited from those who lived in nursing homes for the elderly from June 2018 to November 2019. Equol production status was determined by measuring spot urine levels of equol, and risks of locomotive syndrome were evaluated by vulnerable fracture history and loco-check, a simple questionnaire comprising seven questions that can describe locomotive syndrome. Equol production (≥1 μmol/L in a spot urine sample) was found in 46 women (39.6%). Loss of equol production contributes to some lococheck items, which correlate with weakness of lower limb muscle strength (P < 0.05). In this study population, 57 women (49.1%) had previous vulnerable fractures. However, equol production status was not significantly related to the vulnerable fracture in this study population (P = 0.159). Equol production might contribute to the induction of locomotive syndrome, at least in part. However, equol deficiency as a mechanism of locomotive syndrome induction might not be the primary cause of a previous vulnerable fracture in very elderly women who live in nursing homes.
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- 2023
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15. Phase Unwrapping in Correlated Noise for FMCW Lidar Depth Estimation
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A. Ulvog, J. Rapp, T. Koike-Akino, H. Mansour, P. Boufounos, and K. Parsons
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- 2023
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16. Fumigant dosages below maximum label rate control some soilborne pathogens
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Shachaf Triky-Dotan, Becky Westerdahl, Frank N. Martin, Krishna Subbarao, Steven T. Koike, and Husein A. Ajwa
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soil management ,Plant Science and Plant Products ,disease and pest management ,Health and Pathology ,agricultural management ,Farms and Farming Systems ,Agriculture - Abstract
The activity of commercial soil fumigants on some key soilborne pathogens was assessed in sandy loam soil under controlled conditions. Seven soil fumigants that are registered in California or are being or have been considered for registration were used in this study: dimethyl disulfide (DMDS) mixed with chloropicrin (Pic) (79% DMDS and 21% Pic), Tri-Con (50% methyl bromide and 50% Pic), Midas Gold (33% methyl iodide [MI] and 67% Pic), Midas Bronze (50% MI and 50% Pic), Midas (MI, active ingredient [a.i.] 97.8%), Pic (a.i. 99% trichloronitromethane) and Pic-Clor 60 (57% Pic and 37% 1,3-dichloropropene [1–3,D]). Dose-response models were calculated for pathogen mortality after 24 hours of exposure to fumigants. Overall, the tested fumigants achieved good efficacy with dosages below the maximum label rate against the tested pathogens. In this study, Pythium ultimum and citrus nematode were sensitive to all the fumigants and Verticillium dahliae was resistant. For most fumigants, California regulations restrict application rates to less than the maximum (federal) label rate, meaning that it is possible that the fumigants may not control major plant pathogens. This research provides information on the effectiveness of these alternatives at these lower application rates. The results from this study will help growers optimize application rates for registered fumigants (such as Pic and 1,3-D) and will help accelerate the adoption of new fumigants (such as DMDS) if they are registered in California.
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- 2016
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17. Ξ − atomic X-ray spectroscopy using a counter-emulsion hybrid method
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M Fujita, H Ekawa, Y Endo, R Goto, S Hasegawa, S H Hayakawa, K Hayashi, R Honda, K Hoshino, K Hosomi, M Ichikawa, Y Ichikawa, H Ito, Y Ishikawa, W S Jung, A Kasagi, S H Kim, S Kinbara, H Kobayashi, T Koike, J Y Lee, P M Lin, Y Nagase, D Nakashima, K Nakazawa, T Nanamura, N Nishimura, S Nishimura, A N L Nyaw, M Ohashi, H Sako, M K Soe, H Tamura, A M M Theint, K T Tint, Y Toyama, M Ukai, T O Yamamoto, S B Yang, J Yoshida, M Yoshimoto, and D Zhang
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General Physics and Astronomy - Abstract
Ξ− atomic X-ray spectroscopy is one of the most useful methods for investigation of the Ξ–nucleus strong interaction. Since the X-ray energy is shifted and/or broadened due to the Ξ–nucleus strong interaction compared to those calculated from electromagnetic interaction alone, the measurement of the energy shift, ΔE, and the width, Γ, give us information on the Ξ–nucleus potential. A serious problem in the measurement is the significant background derived from in-flight Ξ− decay. A novel method of identifying stopped Ξ− events using the nuclear emulsion was developed to realize the first Ξ− atomic X-ray spectroscopy experiment as the J-PARC E07 experiment, which also aimed at searching for ΛΛ and Ξ− hypernuclei in the emulsion. The X-rays emitted from Ξ− Br and Ξ− Ag atoms were measured using germanium detectors. No clear peaks were observed in the obtained spectra. However, we succeeded in reducing the background to 1/170 by this method employing coincidence measurements using nuclear emulsion and X-ray detectors.
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- 2022
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18. Maximum Likelihood Surface Profilometry Via Optical coherence Tomography
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J. Rapp, H. Mansour, P. Boufounos, P. Orlik, T. Koike-Akino, and K. Parsons
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- 2022
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19. Correcting basin-scale snowfall in a mountainous basin using a distributed snowmelt model and remote-sensing data
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M. Shrestha, L. Wang, T. Koike, H. Tsutsui, Y. Xue, and Y. Hirabayashi
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
Adequate estimation of the spatial distribution of snowfall is critical in hydrologic modelling. However, this is a well-known problem in estimating basin-scale snowfall, especially in mountainous basins with data scarcity. This study focuses on correction and estimation of this spatial distribution, which considers topographic effects within the basin. A method is proposed that optimises an altitude-based snowfall correction factor (Cfsnow). This is done through multi-objective calibration of a spatially distributed, multilayer energy and water balance-based snowmelt model (WEB-DHM-S) with observed discharge and remotely sensed snow cover data from the Moderate Resolution Imaging Spectroradiometer (MODIS). The Shuffled Complex Evolution–University of Arizona (SCE–UA) automatic search algorithm is used to obtain the optimal value of Cfsnow for minimum cumulative error in discharge and snow cover simulations. Discharge error is quantified by Nash–Sutcliffe efficiency and relative volume deviation, and snow cover error was estimated by pixel-by-pixel analysis. The study region is the heavily snow-fed Yagisawa Basin of the Upper Tone River in northeast Japan. First, the system was applied to one snow season (2002–2003), obtaining an optimised Cfsnow of 0.0007 m−1. For validation purposes, the optimised Cfsnow was implemented to correct snowfall in 2004, 2002 and 2001. Overall, the system was effective, implying improvements in correlation of simulated versus observed discharge and snow cover. The 4 yr mean of basin-average snowfall for the corrected spatial snowfall distribution was 1160 mm (780 mm before correction). Execution of sensitivity runs against other model input and parameters indicated that Cfsnow could be affected by uncertainty in shortwave radiation and setting of the threshold air temperature parameter. Our approach is suitable to correct snowfall and estimate its distribution in poorly gauged basins, where elevation dependence of snowfall amount is strong.
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- 2014
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20. VISUALIZATION OF LOWER EXTREMITY LYMPHEDEMA IN THE SAME COHORT USING (^99m)Tc-HUMAN SERUM ALBUMIN AND (^99m)Tc-PHYTATE LYMPHOSCINTIGRAPHY WITH SPECT-CT
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T. Koike, Y. Yabuki, N. Miki, Y. Yamamoto, K. Kokubo, S. Kitayama, and J. Maegawa
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Immunology and Allergy ,Hematology - Abstract
Lymphoscintigraphy with single-photon emission computed tomography (SPECT-CT) is useful in diagnosing lymphedema. However, there are multiple timings, techniques, and tracers utilized worldwide without any comparison. We examined and compared the image clarity with two different radiotracers, 99mTc-human serum albumin (HSA) and 99mTc-phytate (phytate), in the same patients. The study retrospectivity examined 46 limbs of 36 patients who underwent lymphoscintigraphy using HSA and phytate from January 2013 to September 2018. Tracer accumulation in the lymph nodes, linear pattern (LP), and dermal backflow (DBF) were qualitatively analyzed; contrast-to-noise ratios (CNR) of DBF and standardized uptake value ratio (SUVR) of LP were also quantitatively analyzed. Neither lymph node accumulation nor DBF identification showed significant difference. However, a significant difference was observed between the LP identification of the unaffected (p
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- 2022
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21. Detection of Nematophagous Fungi from Heterodera schachtii Females Using a Baiting Experiment with Soils Cropped to Brassica Species from California’s Central Coast
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James Borneman, Paul M. Ruegger, J. Ole Becker, Nicole B. Colindres, Angelo Loffredo, Steven T. Koike, Christopher Drozd, Beth B. Peacock, Geoffrey D. Logan, Jennifer Smith Becker, Juliana de Oliveira Silva, Ying-Yu Chen, and H. Y. Wu
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0106 biological sciences ,0301 basic medicine ,Dactylella oviparasitica ,Heterodera ,fungi ,Brassica ,Biological pest control ,Biology ,Crop rotation ,biology.organism_classification ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Agronomy ,Soil water ,Heterodera schachtii ,010606 plant biology & botany - Abstract
Until the early 1990s, cyst nematodes were abundant pathogens in fields where hosts of Heterodera spp. were frequent members of crop rotations along California’s Central Coast. To mitigate damage caused by Heterodera schachtii and H. cruciferae, the soil fumigant 1,3-dichloropropene (1,3-D) was used by more than 43% of surveyed broccoli growers. Over the last few decades, use of 1,3-D and other nematicides has dramatically diminished, suggesting a decline in nematode disease pressure. The goal of this study was to examine the hypothesis that increased population densities of nematophagous fungi contribute to the low populations of Heterodera spp. in fields frequently cropped to their hosts. In 2016, soil samples were collected from 152 Brassica fields with a broad geographical distribution, from Santa Barbara County to Santa Cruz County. The average number of Heterodera cysts per 250 cm3 of soil ranged from 0.5 to 27.5, with 62% of the soils harboring no detectable cyst nematodes and only a few samples reaching a potentially damaging threshold level. A baiting experiment with H. schachtii and cabbage was performed in a greenhouse to detect nematophagous fungi associated with nematode females as their posterior end emerged and became exposed to the soil’s rhizosphere. An Illumina-based sequence analysis of these H. schachtii females identified several known nematophagous fungi, including members of the Hyalorbilia oviparasitica clade, Pochonia chlamydosporia, certain Fusarium spp., and others. These soils clearly harbor a diverse population of hyperparasitic fungi that could be biologically suppressing cyst nematodes below a damaging threshold. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .
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- 2021
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22. Multitactic Preplant Soil Fumigation with Allyl Isothiocyanate in Cut Flowers and Strawberry
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Cheryl A. Wilen, Steven T. Koike, Husein A. Ajwa, Steven A. Fennimore, B. B. Westerdahl, Mike Stanghellini, and Mark Hoffmann
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Chemistry ,combined fumigation ,soil disinfestation ,fungi ,Fumigation ,food and beverages ,Cut flowers ,Horticulture ,lcsh:Plant culture ,Allyl isothiocyanate ,chemistry.chemical_compound ,soil-borne pest management ,lcsh:SB1-1110 - Abstract
Allyl isothiocyanate (AITC) is a glucosinolate produced in cruciferous plant species. AITC is known to act as a pesticide on microorganisms, insects, and weeds. Synthetic AITC is registered as a biopesticide for agricultural soil treatment use in the United States and elsewhere in the world. Although a potent pesticide, reports on the weed and pathogen control efficacy of synthetic AITC applied as soil disinfectant are highly variable. Due to the low vapor pressure of AITC, questions remain as to whether pest and weed control efficacy can be improved by combining it with other chemicals. The objective of this study was to assess the control efficacy of AITC stand-alone applications vs. applications, in which AITC was combined with the standard-fumigants chloropicrin, 1,3-dichloropicrin, and methyl isothiocyanate. Two shank-applied on-farm field trials were conducted in cut flower [delphinium (Delphinium elatum), ranunculus (Ranunculus asiaticus)] fields, and two drip tape applied field trials in strawberry (Fragaria ×ananassa) fields in California. Weed pressure, weed seed viability, nematode survival, and pathogen survival of Pythium ultimum, fusarium wilt (Fusarium oxysporum), and verticillium wilt (Verticillium dahliae) were assessed. Cumulative yearly yield of marketable fruit was assessed in the strawberry field trials. The results of this study show that the use of AITC as a stand-alone treatment provided no consistent weed or pathogen control efficacy. However, our results also indicate that shank and drip applied multitactic fumigation approaches with AITC can efficiently control soil-borne diseases and weeds. These findings have potential implications, especially in those areas where certain fumigants are restricted due to regulations and/or availability.
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- 2020
23. Use of a summer cover crop as a partial carbon source for anaerobic soil disinfestation in coastal California
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Carol Shennan, Mark Mazzola, E. Miethke, M. Zavatta, T. Wood, Steven T. Koike, Joji Muramoto, and E. Resultay
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Agronomy ,Carbon source ,Environmental science ,Horticulture ,Cover crop ,Anaerobic exercise - Published
- 2020
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24. Improving the snow physics of WEB-DHM and its point evaluation at the SnowMIP sites
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M. Shrestha, L. Wang, T. Koike, Y. Xue, and Y. Hirabayashi
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
In this study, the snow physics of a distributed biosphere hydrological model, referred to as the Water and Energy Budget based Distributed Hydrological Model (WEB-DHM) is significantly improved by incorporating the three-layer physically based energy balance snowmelt model of Simplified Simple Biosphere 3 (SSiB3) and the Biosphere-Atmosphere Transfer Scheme (BATS) albedo scheme. WEB-DHM with improved snow physics is hereafter termed WEB-DHM-S. Since the in-situ observations of spatially-distributed snow variables with high resolution are currently not available over large regions, the new distributed system (WEB-DHM-S) is at first rigorously tested with comprehensive point measurements. The stations used for evaluation comprise the four open sites of the Snow Model Intercomparison Project (SnowMIP) phase 1 with different climate characteristics (Col de Porte in France, Weissfluhjoch in Switzerland, Goose Bay in Canada and Sleepers River in USA) and one open/forest site of the SnowMIP phase 2 (Hitsujigaoka in Japan). The comparisons of the snow depth, snow water equivalent, surface temperature, snow albedo and snowmelt runoff at the SnowMIP1 sites reveal that WEB-DHM-S, in general, is capable of simulating the internal snow process better than the original WEB-DHM. Sensitivity tests (through incremental addition of model processes) are performed to illustrate the necessity of improvements over WEB-DHM and indicate that both the 3-layer snow module and the new albedo scheme are essential. The canopy effects on snow processes are studied at the Hitsujigaoka site of the SnowMIP2 showing that the snow holding capacity of the canopy plays a vital role in simulating the snow depth on ground. Through these point evaluations and sensitivity studies, WEB-DHM-S has demonstrated the potential to address basin-scale snow processes (e.g., the snowmelt runoff), since it inherits the distributed hydrological framework from the WEB-DHM (e.g., the slope-driven runoff generation with a grid-hillslope scheme, and the flow routing in the river network).
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- 2010
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25. Frozen soil parameterization in a distributed biosphere hydrological model
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L. Wang, T. Koike, K. Yang, R. Jin, and H. Li
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
In this study, a frozen soil parameterization has been modified and incorporated into a distributed biosphere hydrological model (WEB-DHM). The WEB-DHM with the frozen scheme was then rigorously evaluated in a small cold area, the Binngou watershed, against the in-situ observations from the WATER (Watershed Allied Telemetry Experimental Research). First, by using the original WEB-DHM without the frozen scheme, the land surface parameters and two van Genuchten parameters were optimized using the observed surface radiation fluxes and the soil moistures at upper layers (5, 10 and 20 cm depths) at the DY station in July. Second, by using the WEB-DHM with the frozen scheme, two frozen soil parameters were calibrated using the observed soil temperature at 5 cm depth at the DY station from 21 November 2007 to 20 April 2008; while the other soil hydraulic parameters were optimized by the calibration of the discharges at the basin outlet in July and August that covers the annual largest flood peak in 2008. With these calibrated parameters, the WEB-DHM with the frozen scheme was then used for a yearlong validation from 21 November 2007 to 20 November 2008. Results showed that the WEB-DHM with the frozen scheme has given much better performance than the WEB-DHM without the frozen scheme, in the simulations of soil moisture profile at the cold regions catchment and the discharges at the basin outlet in the yearlong simulation.
- Published
- 2010
26. Quantum Feature Extraction for THz Multi-Layer Imaging
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T. Koike-Akino, P. Wang, G. Yamashita, W. Tsujita, and M. Nakajima
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Signal Processing (eess.SP) ,FOS: Computer and information sciences ,Quantum Physics ,Computer Science - Machine Learning ,FOS: Electrical engineering, electronic engineering, information engineering ,FOS: Physical sciences ,Electrical Engineering and Systems Science - Signal Processing ,Quantum Physics (quant-ph) ,Machine Learning (cs.LG) - Abstract
A learning-based THz multi-layer imaging has been recently used for contactless three-dimensional (3D) positioning and encoding. We show a proof-of-concept demonstration of an emerging quantum machine learning (QML) framework to deal with depth variation, shadow effect, and double-sided content recognition, through an experimental validation., Comment: 2 pages, 5 figures, IRMMW-THz2022
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- 2022
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27. Precise Measurement of Differential Cross Sections of the Σ^{-}p→Λn Reaction in Momentum Range 470-650 MeV/c
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K, Miwa, J K, Ahn, Y, Akazawa, T, Aramaki, S, Ashikaga, S, Callier, N, Chiga, S W, Choi, H, Ekawa, P, Evtoukhovitch, N, Fujioka, M, Fujita, T, Gogami, T, Harada, S, Hasegawa, S H, Hayakawa, R, Honda, S, Hoshino, K, Hosomi, M, Ichikawa, Y, Ichikawa, M, Ieiri, M, Ikeda, K, Imai, Y, Ishikawa, S, Ishimoto, W S, Jung, S, Kajikawa, H, Kanauchi, H, Kanda, T, Kitaoka, B M, Kang, H, Kawai, S H, Kim, K, Kobayashi, T, Koike, K, Matsuda, Y, Matsumoto, S, Nagao, R, Nagatomi, Y, Nakada, M, Nakagawa, I, Nakamura, T, Nanamura, M, Naruki, S, Ozawa, L, Raux, T G, Rogers, A, Sakaguchi, T, Sakao, H, Sako, S, Sato, T, Shiozaki, K, Shirotori, K N, Suzuki, S, Suzuki, M, Tabata, C D L, Taille, H, Takahashi, T, Takahashi, T N, Takahashi, H, Tamura, M, Tanaka, K, Tanida, Z, Tsamalaidze, M, Ukai, H, Umetsu, S, Wada, T O, Yamamoto, J, Yoshida, and K, Yoshimura
- Abstract
The differential cross sections of the Σ^{-}p→Λn reaction were measured accurately for the Σ^{-} momentum (p_{Σ}) ranging from 470 to 650 MeV/c at the J-PARC Hadron Experimental Facility. Precise angular information about the Σ^{-}p→Λn reaction was obtained for the first time by detecting approximately 100 reaction events at each angular step of Δcosθ=0.1. The obtained differential cross sections show a slightly forward-peaking structure in the measured momentum regions. The cross sections integrated for -0.7≤cosθ≤1.0 were obtained as 22.5±0.68 [statistical error(stat.)] ±0.65 [systematic error(syst.)] mb and 15.8±0.83(stat)±0.52(syst) mb for 470p_{Σ}(MeV/c)550 and 550p_{Σ}(MeV/c)650, respectively. These results show a drastic improvement compared with past measurements of the hyperon-proton scattering experiments. They will play essential roles in updating the theoretical models of the baryon-baryon interactions.
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- 2021
28. Characteristics of aerosol and cloud particle size distributions in the tropical tropopause layer measured with optical particle counter and lidar
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S. Iwasaki, K. Maruyama, M. Hayashi, S.-Y. Ogino, H. Ishimoto, Y. Tachibana, A. Shimizu, I. Matsui, N. Sugimoto, K. Yamashita, K. Saga, K. Iwamoto, Y. Kamiakito, A. Chabangborn, B. Thana, M. Hashizume, T. Koike, and T. Oki
- Subjects
Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
An optical particle counter (OPC) is used in conjunction with lidar measurements to examine the characteristics of the particle size distribution in cirrus cloud in the tropical tropopause layer (TTL) over Thailand where the TTL is defined as the height at which temperature is lower than −75°C in this paper. Of 11 OPC launches, cirrus cloud was detected at 10–15 km high on 7 occasions, cirrus was detected in the TTL in 6 cases, and simultaneous OPC and lidar measurements were made on two occasions. Comparison of lidar and OPC measurements reveal that the cloud heights of cirrus in the TTL varies by several hundred meters over distances of tens kilometers; hence the height is not always horizontally uniform. The mode radii of particles constituting the clouds are estimated by lidar and OPC measurements to be less than approximately 10 μm. The regression lines of the particle size distribution with and without cirrus cloud exhibit similar features at equivalent radii of
- Published
- 2007
29. Development of a Ge detector array and an in-beam calibration system for highly precise measurement of Ξ− atomic X-rays
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M. Fujita, K. Hosomi, Y. Ishikawa, H. Kanauchi, T. Koike, Y. Ogura, H. Tamura, K. Tanida, M. Ukai, and T.O. Yamamoto
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Nuclear and High Energy Physics ,Instrumentation - Published
- 2022
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30. First Report of Root Rot Caused by
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N C, Luecke, K M, Crawford, S T, Koike, H, Stanghellini, and A, Burkhardt
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Ascomycota ,Pythium ,Brassica ,Plant Roots - Published
- 2021
31. Scientists, growers assess trade-offs in use of tillage, cover crops and compost
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Louise E Jackson, Irenee Ramirez, Ron Yokota, Steven A Fennimore, Steven T Koike, Diane M Henderson, William E Chaney, and Karen M Klonsky
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Agriculture - Abstract
Use of cover crops and compost increased soil quality in irrigated, intensive production of lettuce and broccoli in the Salinas Valley. These methods had the beneficial impacts of increasing soil microbial biomass, increasing total soil carbon and nitrogen, reducing surface bulk density and decreasing the potential for groundwater pollution as a result of nitrate leaching below the root zone. These soil benefits did not lead to lower yields and occasionally resulted in fewer weeds and lower lettuce corky root disease. Although surface minimum tillage reduced yields, it led to reduced potential for nitrate leaching below the root zone. Use of conventional tillage, cover crops, and compost produced high vegetable yields and acceptable net economic returns over a 2-year period, but broccoli was more profitable than lettuce under this regime. Understanding the trade-offs of various costs and benefits will help growers choose management practices that optimize economic and environmental benefits.
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- 2003
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32. A 28-nm Automotive Flash Microcontroller With Virtualization-Assisted Processor Supporting ISO26262 ASIL D
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Minoru Uemura, Noriaki Sakamoto, Kosuke Yayama, Yasuhisa Shimazaki, T. Koike, Toshihiro Hattori, Naoto Okumura, Masao Ito, Tomonori Yanagita, Sugako Otani, Hiroyuki Kondo, Norimasa Otsuki, Yasufumi Suzuki, and Shohei Maeda
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Functional safety ,Electronic control unit ,business.industry ,Computer science ,020208 electrical & electronic engineering ,Automotive industry ,Hypervisor ,02 engineering and technology ,computer.software_genre ,Virtualization ,Microcontroller ,Virtual machine ,Embedded system ,0202 electrical engineering, electronic engineering, information engineering ,ComputerSystemsOrganization_SPECIAL-PURPOSEANDAPPLICATION-BASEDSYSTEMS ,Central processing unit ,Electrical and Electronic Engineering ,business ,computer - Abstract
In the autonomous driving era, automotive architecture has been rapidly progressing toward electronic control unit (ECU) integration and centralization. Advanced vehicle control is becoming increasingly important for safe driving. It requires microcontroller unit (MCU) integration, the highest automotive safety integrity level (ASIL), and network performance improvement. A 28-nm 600-MHz automotive flash MCU has been developed for next-generation automotive architecture. The MCU for vehicle control integrates three key features: a virtualization-assisted processor (VAP) for functional safety, a built-in self-test in the field (field-BIST) at a sleep resume (SR) BIST for functional safety, and a serial gigabit media independent interface (SGMII) for the in-vehicle network. The VAP helps the hypervisor to realize real-time virtualization to execute several different virtual machines without interference. The SR-BIST realizes random hardware failures per hour of 10−8 in various automotive applications. In the SGMII circuit, we used 5-V transistors for high reliability despite their narrow bandwidth. The automotive MCU satisfies the ISO26262 ASIL D system requirements with a low power consumption of 0.52 W. The VAP can realize the severe automotive control hard real time capability.
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- 2020
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33. Measurements of Aerial Spore Load by qPCR Facilitates Lettuce Downy Mildew Risk Advisement
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Bullo Erena Mamo, A. D. Fox, Krishna V. Subbarao, Steven T. Koike, Amy Anchieta, Steven J. Klosterman, and Nikhilesh Dhar
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0106 biological sciences ,0301 basic medicine ,Air Microbiology ,Plant Science ,Biology ,Polymerase Chain Reaction ,01 natural sciences ,03 medical and health sciences ,Disease management (agriculture) ,Pathogen ,Plant Diseases ,Oomycete ,Bremia lactucae ,Air ,Sporangium ,Agriculture ,Lettuce ,Spores, Fungal ,biology.organism_classification ,Spore ,Fungicide ,Horticulture ,030104 developmental biology ,Oomycetes ,Downy mildew ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
The lettuce downy mildew pathogen, Bremia lactucae, is an obligate oomycete that causes extensive produce losses. Initial chlorotic symptoms that severely reduce the market value of the produce are followed by the appearance of white, downy sporulation on the abaxial side of the leaves. These spores become airborne and disseminate the pathogen. Controlling lettuce downy mildew has relied on repeated fungicide applications to prevent outbreaks. However, in addition to direct economic costs, heterogeneity and rapid adaptation of this pathogen to repeatedly applied fungicides has led to the development of fungicide-insensitivity in the pathogen. We deployed a quantitative PCR assay-based detection method using a species-specific DNA target for B. lactucae coupled with a spore trap system to measure airborne B. lactucae spore loads within three commercial fields that each contained experimental plots, designated EXP1 to EXP3. Based upon these measurements, when the spore load in the air reached a critical level (8.548 sporangia per m3 air), we advised whether or not to apply fungicides on a weekly basis within EXP1 to EXP3. This approach saved three sprays in EXP1, and one spray each in EXP2 and EXP3 without a significant increase in disease incidence. The reduction in fungicide applications to manage downy mildew can decrease lettuce production costs while slowing the development of fungicide resistance in B. lactucae by eliminating unnecessary fungicide applications.
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- 2020
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34. Non-oak native plants are main hosts for sudden oak death pathogen in California
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Matteo Garbelotto, Jennifer M Davidson, Kelly Ivors, Patricia E Maloney, Daniel Hüberli, Steven T Koike, and David M Rizzo
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Agriculture - Abstract
The finding of Phytophthora ramorum — the pathogen that causes sudden oak death in four California native trees — on rhododendron in Europe led us to hypothesize that its host range in California's natural forests was much greater than previously suspected. In addition to the affected oak species, we have now identified an additional 13 species from 10 plant families that act as hosts for P. ramorum in California. Our data indicates that nearly all of the state's main tree species in mixed-evergreen and redwood-tanoak forests — including the coniferous timber species coast redwood and Douglas fir — may be hosts for P. ramorum. The broad host range of P. ramorum, the variability of symptoms among different hosts and the ability of the pathogen to disperse by air suggests that it may have the potential to cause long-term, landscape-level changes in California forests.
- Published
- 2003
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35. Detection of Fusarium oxysporum f. sp. fragariae from Infected Strawberry Plants
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Peter M. Henry, Alyssa Burkhardt, Frank N. Martin, Steven T. Koike, and Thomas R. Gordon
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0106 biological sciences ,0301 basic medicine ,Fusarium ,biology ,Fungal genetics ,food and beverages ,Recombinase Polymerase Amplification ,Plant Science ,biology.organism_classification ,Fragaria ,01 natural sciences ,Fusarium wilt ,Microbiology ,03 medical and health sciences ,030104 developmental biology ,Genetic marker ,Fusarium oxysporum ,TaqMan ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
Isolates of the Fusarium oxysporum species complex have been characterized as plant pathogens that commonly cause vascular wilt, stunting, and yellowing of the leaves in a variety of hosts. F. oxysporum species complex isolates have been grouped into formae speciales based on their ability to cause disease on a specific host. F. oxysporum f. sp. fragariae is the causal agent of Fusarium wilt of strawberry and has become a threat to production as fumigation practices have changed in California. F. oxysporum f. sp. fragariae is polyphyletic and limited genetic markers are available for its detection. In this study, next-generation sequencing and comparative genomics were used to identify a unique genetic locus that can detect all of the somatic compatibility groups of F. oxysporum f. sp. fragariae identified in California. This locus was used to develop a TaqMan quantitative polymerase chain reaction assay and an isothermal recombinase polymerase amplification (RPA) assay that have very high sensitivity and specificity for more than 180 different isolates of the pathogen tested. RPA assay results from multiple field samples were validated with pathogenicity tests of recovered isolates.
- Published
- 2019
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36. Evaluation of post-contamination survival and persistence of applied attenuated E. coli O157:H7 and naturally-contaminating E. coli O157:H7 on spinach under field conditions and following postharvest handling
- Author
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Adrian Sbodio, Amy M. Gundersen, Steven T. Koike, Trevor V. Suslow, and Eduardo Gutierrez-Rodriguez
- Subjects
Meteorological Concepts ,Food Handling ,Population ,Colony Count, Microbial ,Food Contamination ,Escherichia coli O157 ,Microbiology ,Population density ,California ,Petiole (botany) ,Persistence (computer science) ,03 medical and health sciences ,Spinacia oleracea ,education ,Soil Microbiology ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,Microbial Viability ,biology ,030306 microbiology ,Chemistry ,Agriculture ,Contamination ,biology.organism_classification ,Plant Leaves ,Horticulture ,Consumer Product Safety ,Food Microbiology ,Postharvest ,Silver Nitrate ,Spinach ,Food Science ,Field conditions - Abstract
This study determined the variability in population uniformity of an applied mixture of attenuated E. coli O157:H7 (attEcO157) on spinach leaves as impacted by sampling mass and detection technique over spatial and temporal conditions. Opportunistically, the survival and distribution of naturally contaminating pathogenic E. coli O157:H7 (EcO157), in a single packaged lot following commercial postharvest handling and washing, was also evaluated. From the main study outcomes, differences in the applied inoculum dose of 100-fold, resulted in indistinguishable population densities of approximately Log 1.1 CFU g−1 by 14 days post-inoculation (DPI). Composite leaf samples of 150 g and the inclusion of the spinach petiole resulted in the greatest numerical sensitivity of detection of attEcO157 when compared to 25 and 150 g samples without petioles (P
- Published
- 2019
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37. Hemodynamic Analysis of Cerebral AVMs with 3D Phase-Contrast MR Imaging
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S. Kiyofuji, T. Koike, H. Uchikawa, Y. Shinya, Mariko Kawashima, Hirotaka Hasegawa, Yasuhiro Suzuki, T. Sekine, Taichi Kin, Nobuhito Saito, and Y. Takeda
- Subjects
Intracranial Arteriovenous Malformations ,medicine.medical_specialty ,business.industry ,Phase contrast microscopy ,Adult Brain ,Hemodynamics ,Mr imaging ,Magnetic Resonance Imaging ,law.invention ,Imaging, Three-Dimensional ,law ,cardiovascular system ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Neurology (clinical) ,Radiology ,business ,Cerebral Hemorrhage - Abstract
BACKGROUND AND PURPOSE: The hemodynamics associated with cerebral AVMs have a significant impact on their clinical presentation. This study aimed to evaluate the hemodynamic features of AVMs using 3D phase-contrast MR imaging with dual velocity-encodings. MATERIALS AND METHODS: Thirty-two patients with supratentorial AVMs who had not received any previous treatment and had undergone 3D phase-contrast MR imaging were included in this study. The nidus diameter and volume were measured for classification of AVMs (small, medium, or large). Flow parameters measured included apparent AVM inflow, AVM inflow index, apparent AVM outflow, AVM outflow index, and the apparent AVM inflow-to-outflow ratio. Correlation coefficients between the nidus volume and each flow were calculated. The flow parameters between small and other AVMs as well as between nonhemorrhagic and hemorrhagic AVMs were compared. RESULTS: Patients were divided into hemorrhagic (n = 8) and nonhemorrhagic (n = 24) groups. The correlation coefficient between the nidus volume and the apparent AVM inflow and outflow was .83. The apparent AVM inflow and outflow in small AVMs were significantly smaller than in medium AVMs (P
- Published
- 2021
38. POS0290 THE EFFECTS OF TREATMENT RESPONSE AND RISK FACTOR TO INHIBIT THE CLINICAL RESPONSE IN PATIENTS WITH DIFFICULT-TO-TREAT RHEUMATOID ARTHRITIS TREATED WITH IL-6 RECEPTOR INHIBITOR, ABATACEPT AND JAK INHIBITOR
- Author
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S. Anno, T. Okano, K. Mandai, K. Orita, Y. Yamada, K. Mamoto, T. Iida, M. Tada, K. Inui, T. Koike, and H. Nakamura
- Subjects
Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundRecently, the disease activity of rheumatoid arthritis (RA) was improved due to the ‘treat-to-target’ strategy. However, some patients remain various symptoms despite recommended treatment was performed. Then, the term of ‘difficult-to-treat RA (D2TRA)’ is widely recognized. It is unknown how the difference of type of biological disease-modifying anti rheumatic dugs (bDMARDs)/Janus kinase inhibitor (JAKi) will affect clinical efficacy in patients with D2TRA. Moreover, the risk factor to inhibit the clinical response in patients with D2TRA is unknown.ObjectivesThe aim of this study was to evaluate the treatment response in patients with D2TRA who were treated with interleukin 6 receptor inhibitor (IL-6Ri), abatacept and JAKi.MethodsThis study used the multicenter database included 673 RA patients treated with bDMARDs/JAKi (tocilizumab 240, sarilumab 67, abatacept 146, tofacitinib 101, baricitinib 83, upadacitinib 20, peficitinib 14, filgotinib 2). Two hundred forty-two patients were treated as first line bDMARDs/JAKi (IL-6Ri 117, abatacept 63, JAKi 62), 211 patients were treated as second line bDMARDs/JAKi (IL-6Ri 117, abatacept 37, JAKi 57), 220 patients were treated as third and more bDMARDs/JAKi. In these 220 patients, 82 patients did not meet D2TRA criteria (IL-6Ri 42, abatacept 15, JAKi 25) and 138 patients met D2TRA criteria (IL-6Ri 31, abatacept 31, JAKi 76). In all patients, we analyzed 138 patients with D2TRA (113 female, mean age was 63.1 ± 13.7 years). Drug retention rate and effectiveness of bDMARDs/JAKi in patients with D2TRA were evaluated for 24 weeks. Multivariate linear regression analysis was performed to clarify the risk factors to inhibit the clinical response.ResultsDrug retention rate of patients with D2TRA at 24 weeks was 67.7% in IL-6Ri group, 74.2% in abatacept group, 61.8% in JAKi group. Drug retention rate in patients with D2TRA was not different between groups (IL-6Ri vs abatacept: p=0.86, IL-6Ri vs JAKi group: p=0.39, abatacept vs JAKi group: p=0.33). DAS28-CRP at 4, 12, 24 weeks decreased in all group (Figure 1). Abatacept showed lower improvement ratio of DAS28-CRP at 24 weeks compared to IL-6Ri group (IL-6Ri vs abatacept: p 1.2 with a score < 3.2) was 52.4% patients in IL-6Ri, 17.4% patients in abatacept, 29.8% patients in JAKi. SDAI and CDAI at 4, 12, 24 weeks decreased in all group (Figure 1). There were no diferences between the groups in improvement ratio of SDAI (IL-6Ri vs abatacept: p=0.11, IL-6Ri vs JAKi: p=0.81, abatacept vs JAKi: p=0.08) and CDAI (IL-6Ri vs abatacept: p=0.31, IL-6Ri vs JAKi: p=0.82, abatacept vs JAKi: p=0.13) at 24 weeks. HAQ was 1.42, 1.15, 1.39 at baseline, 1.27, 1.07, 1.22 at 4 weeks, 1.17, 1.07, 1.17 at 12 weeks, 1.26, 1.06, 1.14 at 24 weeks in IL-6Ri group, abatacept and JAKi, respectively. Multivariate linear regression analysis revealed that high HAQ (β=0.28, p=0.02) and high dosage of glucocorticoid (β=0.67, pTable 1.Multivariate linear regression analysis of risk factor to inhibit the clinical response in patients with D2TRA.β95% CIpAge (years)-0.037-0.025, 0.0170.74male-0.047-0.788, 0.4860.64Disease durations (years)-0.048-0.028, 0.0170.63RF (IU/ml)-0.082-0.0004, 0.00020.41Anti CCP antibody (U/ml)0.111-0.0005, 0.0020.26DAS28-CRP-0.063-0.265, 0.1420.55HAQ0.2790.059, 0.7170.02MTX (mg/day)0.136-0.018, 0.0810.21Glucocorticoid dose (mg/day)0.6690.174, 0.324< 0.01Type of bDMARDs/JAKi-0.088-0.415, 0.1510.36ConclusionDrug retention rate and clinical efficacy of D2TRA patients were not different among IL-6Ri, abatacept and JAKi. DT2RA patient with functional disorder and high dosage of glucocorticoid were risk factor to inhibit the clinical response.Disclosure of InterestsNone declared
- Published
- 2022
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39. AB0387 THE RELATIONSHIP BETWEEN JAK INHIBITORS AND CREATINE KINASE ELEVATION IN PATIENTS WITH RHEUMATOID ARTHRITIS: A REAL-WORLD CLINICAL STUDY
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M. Tada, T. Okano, K. Mamoto, Y. Yamada, K. Orita, K. Mandai, S. Anno, T. Iida, K. Inui, and T. Koike
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundSome cases of creatine kinase (CK) elevation caused by Janus kinase (JAK) inhibitor treatment for rheumatoid arthritis (RA) have been reported in clinical trials1. However, the frequency and patients’ background characteristics in clinical practice are unknown.ObjectivesThe correlation between JAK inhibitor treatment for RA and changes in CK levels in clinical practice were investigated using a multicenter database.MethodsThe multicenter database of JAK inhibitors was used, and 103 (tofacitinib 46, baricitinib 44, upadacitinib 11, peficitinib 1, filgotinib 1) of 265 RA patients were followed up at 24 weeks, and their CK levels were evaluated. The time-dependent change of CK was evaluated by sex and analyzed by the Wilcoxon signed-rank test. The percentage abnormal from the standard titer was calculated. The factors related to an elevated CK at 24 weeks were investigated using patients’ background characteristics at the time of starting JAK inhibitors by univariate analysis.ResultsWomen accounted for 85.4% of the patients, the median age was 68 years, disease duration was 15 years, and the mean DAS28ESR was 5.00. The CK levels of both men and women were significantly elevated at 4 weeks and maintained until 24 weeks (men, women: 63, 62 (0 weeks), 101, 95 (4 weeks), 119, 96 (12 weeks), 155, 99 (24 weeks), U/L, PTable 1.Characteristics at the time of starting JAK inhibitors related to elevated creatine kinase levels at 24 weeksUnivariateData at stating JAK inhibitorsR valueP valueCreatine kinase0.653Gender, men0.2470.012Steinbrocker stage-0.2150.039Steinbrocker class-0.2770.008modified health assessment questionnaire-0.2680.008Creatinine0.2890.003eGFR-0.2310.019LDH0.2010.041Glucocorticoid use-0.4090.008Analyzed by Spearman rank correlation coefficientFigure 1.Time-dependent changes of CK in all RA patientsConclusionCK was significantly elevated at 4 weeks and maintained until 24 weeks. However, no patients complained of muscle pain and stopped JAK inhibitors. Patients with high CK, low eGFR, high LDH, or maintained activities of daily living at the time of starting JAK inhibitors tended to have high CK levels at 24 weeks.References[1]Fleischmann, R. et al. Upadacitinib Versus Placebo or Adalimumab in Patients With Rheumatoid Arthritis and an Inadequate Response to Methotrexate: Results of a Phase III, Double-Blind, Randomized Controlled Trial. Arthritis & rheumatology (Hoboken, N.J.) 71, 1788-1800, doi:10.1002/art.41032 (2019).Disclosure of InterestsNone declared
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40. AB0340 SHORTENING THE DOSING INTERVAL OR DOSE ESCALATION OF BIOLOGICAL DMARDs SUPPRESSED RESIDUAL ULTRASOUND SYNOVITIS AND JOINT DESTRUCTION IN PATIENTS WITH RHEUMATOID ARTHRITIS -STARBOARD STUDY
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Y. Yamada, T. Okano, K. Mamoto, K. Inui, K. Mandai, T. Koike, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundIn patients with rheumatoid arthritis (RA) who have residual synovitis even after using biological disease modified anti-rheumatic drug (bDMARDs), joint destruction may progress1,. The enhanced treatment such as shortening the dosing interval or dose escalation of bDMARDs are recommended for these patients, if allowed in package inserts 2, 3.ObjectivesWe investigated the effects of enhanced treatment in RA patients with residual synovitis under treatment with standard dose of bDMARDs.MethodsForty RA patients treated with standard dose of infliximab, tocilizumab or golimumab were included in this study. Ultrasound (US) examination was performed at the bilateral first to fifth metacarpophalangeal (MCP) joints, first interphalangeal (IP) and second to fifth proximal interphalangeal (PIP) joints, wrist joints (three parts of radial, medial and ulnar) and first to fifth metatarsophalangeal (MTP) joints, by using HI VISION Ascendus (Hitachi Medical Corporation, Japan) with a multifrequency linear transducer (18-6 MHz). Residual synovitis was defined as Power Doppler score (PD) ≥2. In patients with residual synovitis, we recommended enhanced treatment. The patients were divided into 3 groups, PD≥2/ET+ group (patients agreed enhanced treatment), PD≥2/ET- group (patients rejected enhanced treatment), and PDResultsThere were 9 patients in PD≥2/ET+ group and 31 patients in PD0.99) (Figure 1).Figure 1.Disease activity, ultrasound assessment and radiographic change from baseline (BL) to 1-year follow-up in RA patients with residual synovitis who had enhanced treatment (PD≥2/ET+) and those without active synovitis (PD*Each parameter at BL and 1-year was statistically analyzed by Wilcoxin signed rank test only in PD≥2/ET+ group.**Difference in two groups at BL was statistically analyzed by Student t test or Mann-Whitney U test.SDAI: simplified disease activity index, HAQ: health assessment questionnaire, PD: Power Doppler, MMP-3: matrix metalloproteinase 3, mTSS: modified Total Sharp Score.ConclusionIn RA patients with the residual synovitis under treatment with standard dose of bDMARDs, enhanced treatment decreased the synovitis and suppressed the joint destruction.References[1]Nguyen H, Ruyssen-Witrand A, Gandjbakhch F, Constantin A, Foltz V, Cantagrel A. Prevalence of ultrasound-detected residual synovitis and risk of relapse and structural progression in rheumatoid arthritis patients in clinical remission: a systematic review and meta-analysis. Rheumatology (Oxford). 2014 Nov;53(11):2110-8.[2]Ogata A, Tanaka Y, Ishii T, Kaneko M, Miwa H, Ohsawa S; SHINOBI study group. A randomized, double-blind, parallel-group, phase III study of shortening the dosing interval of subcutaneous tocilizumab monotherapy in patients with rheumatoid arthritis and an inadequate response to subcutaneous tocilizumab every other week: Results of the 12-week double-blind period. Mod Rheumatol. 2018 Jan;28(1):76-84.[3]Takeuchi T, Miyasaka N, Tatsuki Y, Yano T, Yoshinari T, Abe T, Koike T. Baseline tumour necrosis factor alpha levels predict the necessity for dose escalation of infliximab therapy in patients with rheumatoid arthritis. Ann Rheum Dis. 2011 Jul;70(7):1208-15.Disclosure of InterestsNone declared
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41. POS0631 EVEN LOW-DOSE GLUCOCORTICOID USE IS A RISK FACTOR FOR CLINICAL FRACTURES IN PATIENTS WITH RHEUMATOID ARTHRITIS: TEN-YEAR FINDINGS OF THE TOMORROW STUDY
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C. Yoshimura, T. Koike, K. Mamoto, T. Okano, Y. Sugioka, M. Tada, K. Inui, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundPatients with rheumatoid arthritis (RA) who have sarcopenia and stiff or painful joints might be at increased risk of falls and fractures.ObjectivesThe present study aimed to prospectively identify the incidence of clinical fractures and associated risk factors in patients with RA in a cohort study named the TOMORROW (UMIN000003876) that started in 2010.MethodsWe evaluated anthropometric parameters, bone mineral density (BMD), disease activity, RA medication at entry and observed the incidence of clinical fractures during ten years in 202 patients with RA (mean age, 58.6 y; medication with biological agents, 54.9%) and 202 age- and sex-matched non-RA volunteers (Vo) (mean age, 57.4 y). We compared the incidence of clinical fractures between patients with RA and Vo for ten years, and analyzed the risk factors for clinical fractures using Cox proportional hazard model.ResultsThe incidences of clinical fractures were 0.036 and 0.024/person-year in patients with RA and Vo, respectively. Cox proportional hazard model revealed that low BMD at the thoracic vertebrae (< 0.7 g/cm2) and history of fractures at entry were significantly associated with the incidence of clinical fractures (Hazard ratio [HR]1.737, p=0.020 and HR1.514, p=0.047, respectively) in all participants. RA morbidity, however, was not (HR1.398, p=0.112). In patients with RA, medication with GC at entry was a significant risk factor for clinical fractures (HR1.898, p=0.017). Additionally, a mean GC dose (≥ 2 mg/day) at entry and during the ten-year period increased risk for fractures (HR 2.189, p=0.004, 1.866, p=0.022, respectively).ConclusionRA per se was not a risk factor for clinical fractures in this cohort. Low BMD at the thoracic vertebrae at entry and the use of GC with even low dose at entry and during ten years were significantly associated with an increased frequency of clinical fractures among patients with RA.Disclosure of InterestsNone declared
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42. AB0229 ACHIEVING GLUCOCORTICOID FREE MIGHT DECREASE RISK FOR CLINICAL FRACTURES IN PATIENTS WITH RHEUMATOID ARTHRITIS - TEN-YEAR FINDINGS FROM THE TOMORROW STUDY
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K. Mamoto, T. Koike, T. Okano, Y. Sugioka, M. Tada, K. Inui, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundPatients with rheumatoid arthritis (RA) who have muscle weakness and stiff or painful joints might be at increased risk of falls and fractures.ObjectivesThe present study prospectively investigates correlations between decreasing doses of glucocorticoid (GC) and the incidence of clinical fractures in patients with RA based on the ten-year findings of the TOMORROW study (UMIN000003876) that started in 2010.MethodsWe evaluated anthropometric parameters, bone mineral density, disease activity, RA medication, and the incidence of clinical fractures over a period of ten years in 202 patients with RA (mean age, 58.6 years; mean disease duration, 14.0 years). We also investigated the effects of GC doses on the incidence of clinical fractures over the same period in patients with RA using multivariate regression analysis.ResultsThe incidence of clinical fractures for ten years in patients with RA was 0.036/person-year. There were 89 patients (44.1%) treated with GC at least once during ten years. The incidences of clinical fractures in patients with RA treated with and without GC during ten years were 0.052 and 0.026/person-year, respectively. After adjusting for fracture risk factors including age, sex, smoking, and body mass index, cox proportional hazard model revealed that GC dose of ≥ 2 mg/day at baseline was a significant risk factor for clinical fractures (Hazard ratio [HR]:2.430; 95%CI, 1.040-5.675, p=0.040). Although the risk for clinical fractures did not decrease by just reducing the dose of GC (HR:4.505; 95%CI, 0.589-34.457, p=0.147), it was significantly lower if the dose of GC could be reduced to zero during ten years (HR:0.407; 95%CI, 0.194-0.857, p=0.018).ConclusionMedication with even low dose of GC are apparently significantly associated with an increased frequency of clinical fractures among patients with RA. However, if the dose of GC was reduced to free during ten years, the clinical fracture risk could become lower. We concluded that we should decrease the dose of GC to free after controlling disease activity of RA.Disclosure of InterestsNone declared
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43. AB0188 ULTRASONOGRAPHIC RESIDUAL INTRA-ARTICULAR SYNOVITIS IS MORE SEVERE IN RHEUMATOID ARTHRITIS PATIENTS TREATED WITH PREDNISOLONE
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T. Okano, K. Mamoto, Y. Yamada, K. Mandai, S. Anno, M. Tada, K. Inui, T. Koike, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundThe treatment option including biological DMARDs (BIO) and JAK inhibitor (JAK) was expanded, and the number of patients reached to the treatment target are increasing in rheumatoid arthritis (RA). On the other hand, it is also true that some patients are still using prednisolone (PSL). Recently, ultrasound has played a role of sensitive imaging modality in the diagnosis and follow-up of patients with RA. It is known that residual synovitis was found in ultrasound even in patients with clinical remission.ObjectivesWe investigated the differences of ultrasonographic intra-articular synovitis findings between treatment drugs in patients with RA.MethodsFrom January 2017 to August 2020, 750 RA patients who underwent ultrasound examination were included. A US examination was performed at the bilateral first to fifth metacarpophalangeal (MCP) joints, first interphalangeal (IP) and second to fifth proximal interphalangeal (PIP) joints, wrist joints (three part of radial, medial and ulnar) and first to fifth metatarsophalangeal (MTP) joints, by using HI VISION Ascendus (Hitachi Medical Corporation, Japan) with a multifrequency linear transducer (18-6 MHz). The gray scale and power Doppler findings were assessed by the semi-quantitative method (0-3). All patients were divided into with or without BIO / JAK, methotrexate (MTX) and PSL. Then, patients were matched using the propensity score adjusted for gender, age, RA disease duration, disease activity, CRP value, and MMP-3 value. The total gray scale and power Doppler score (GSUS / PDUS) were compared between treatment drugs of RA by using propensity score matching methods.ResultsThe average age of 750 RA patients were 64.5 years and an average disease duration of RA was 13.9 years and females were 581 (77.5%). There were 517 patients (68.9%) treated with BIO/JAK and 233 patients treated without BIO/JAK. The 205 patients in each group were matched. GSUS were 10.6±11.1 vs 9.2±10.4 (p=0.218) and PDUS 7.4±9.2 vs 6.5±9.0 (p=0.328). Ultrasound residual synovitis was not different between with or without BIO/JAK in matched patients. There were 525 patients (70.0%) treated MTX, the average MTX dose was 9.3 mg, and 225 patients treated without MTX. The 203 patients with or without MTX in each group were matched. GSUS were 9.7±10.6 vs 11.4±12.0 (p=0.119) and PDUS 6.6±8.8 vs 8.1±10.1 (p=0.117). Ultrasound residual synovitis was not different between with or without MTX in matched patients. There were 111 patients (14.8%) treated PSL, the average dose was 4.0mg, and 639 patients treated without PSL. The 105 patients with or without PSL in each group were matched. GSUS were 15.7±13.9 vs 11.6±10.6 (p=0.018) and PDUS 11.5±11.4 vs 8.1±9.6 (p=0.021). Ultrasound residual synovitis was more severe treated with PSL than without PSL in matched patients.ConclusionIn a comparison between RA patients matched backgrounds such as disease activity, there was no difference in ultrasound residual synovitis between patients with or without BIO/JAK and MTX. However, there was significant difference in patients with or without PSL. This suggests that PSL use suppresses clinical symptoms but does not improve synovitis. Thus, it should be noted that joint destruction may progress in patients treating with PSL.References[1]Grassi W, Okano T, Di Geso L, Filippucci E. Imaging in rheumatoid arthritis: options, uses and optimization. Expert Rev Clin Immunol. 2015;11:1131-46.[2]Nguyen H, Ruyssen-Witrand A, Gandjbakhch F, Constantin A, Foltz V, Cantagrel A. Prevalence of ultrasound-detected residual synovitis and risk of relapse and structural progression in rheumatoid arthritis patients in clinical remission: a systematic review and meta-analysis. Rheumatology (Oxford). 2014;53:2110-8.AcknowledgementsWe wish to thank Atsuko Kamiyama, Tomoko Nishimura for clinical assistant, Setsuko Takeda, Emi Yamashita, Yuko Yoshida, Emi Ohtani, Yuka Domae, Asami Yagami, Shingo Washida for their special efforts as a sonographer and collecting data.Disclosure of InterestsTadashi Okano Speakers bureau: Asahi Kasei, Astellas, Abbvie, Amgen, Ayumi, Chugai, Daiichi-Sankyo, Eisai, Eli Lilly, Gilead Sciences, Janssen, Kyowa Kirin, Mitsubishi Tanabe, Novartis, Ono, Pfizer, Sanofi, Takeda, UCB, Grant/research support from: Asahi Kasei, Abbvie, Chugai, Eisai, Mitsubishi Tanabe, Kenji Mamoto: None declared, Yutaro Yamada: None declared, Koji Mandai: None declared, Shohei Anno: None declared, Masahiro Tada: None declared, Kentaro Inui Speakers bureau: Daiichi Sankyo Co. Ltd., Mitsubishi Tanabe Pharma, Janssen Pharmaceutical K.K., Astellas Pharma Inc., Takeda Pharmaceutical Co. Ltd., Ono Pharmaceutical Co. Ltd., Abbvie GK, Pfizer Inc., Eisai Co.,Ltd., Chugai Pharmaceutical Co., Ltd., Grant/research support from: Janssen Pharmaceutical K.K., Astellas Pharma Inc., Sanofi K.K., Abbvie GK, Takeda Pharmaceutical Co. Ltd., QOL RD Co. Ltd., Mitsubishi Tanabe Pharma, Ono Pharmaceutical Co. Ltd., Eisai Co.,Ltd.,, Tatsuya Koike Speakers bureau: Takeda Pharmaceutical, Mitsubishi Tanabe Pharma Corporation, Chugai Pharmaceutical, Eisai, Abbott Japan, Teijin Pharma, Banyu Pharmaceutical and Ono Pharmaceutical, Hiroaki Nakamura: None declared
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44. AB0405 JAK INHIBITORS IMPROVE PATIENT-REPORTED OUTCOMES SUCH AS PAIN AND HAQ EARLIER THAN ANTI-IL-6 INHIBITORS
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T. Okano, T. Koike, K. Inui, M. Tada, K. Mamoto, Y. Yamada, K. Orita, K. Mandai, S. Anno, T. Iida, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundClinical feature of Janus kinase (JAK) inhibitor is recognized as not only suppress inflammation but also improve patient-reported outcomes (PRO) such as pain and health assessment questioner (HAQ) in patients with rheumatoid arthritis (RA). This representative clinical feature was known as a results of phase 3 trial compared to TNF inhibitor. One of the mechanisms of JAK in RA is to suppresses interleikin-6 (IL-6). However, the effect for PRO in JAK inhibitor compared to IL-6 inhibitor have not been known.ObjectivesWe investigated the effect for patient-reported outcomes such as pain and HAQ in patients with RA treated with JAK inhibitor compared to IL-6 inhibitor.MethodsThis study was analysed a multicenter database included RA patients treated with biological disease-modifying anti rheumatic dugs (bDMARDs) and JAK inhibitors. In 307 patients treated with IL-6 inhibitor (tocilizumab 240 and sarilumab 67) and 220 patients with JAK inhibitor (tofacitinib 101, baricitinib 83, upadacitinib 20, peficitinib 14 and filgotinib 2), 155 patients were treated as first-line bDMARDs/JAK inhibitor (IL-6R inhibitor 104 and JAK inhibitor 51). In this first-line patients, patients treated with IL-6R inhibitor and JAK inhibitor were matched using the propensity score adjusted for gender, age, RA disease duration, baseline charactristics of disease activity, CRP level, and MMP-3 level. The beaseline data and the change of clinical and laboratory data at 4, 12 and 24 weeks were compared between IL-6 inhibitor and JAK inhibitor.ResultsThirty-six patients in each group were matched and analyzed. The average age was 62.4 and 62.6 years and the average disease duration of RA was 13.2 and 10.1 years in IL-6 inhibitor and JAK inhibitor. The baseline characteristics were not significantly different in both groups. At week 4, tender joint count (TJC) was significantly improved in JAK inhibitor than IL-6 (IL-6: -1.86 vs JAK: -4.12, p= 0.036) and HAQ was significantly improved in JAK inhibitor than IL-6 (IL-6: -0.04 vs JAK: -0.27, p= 0.041). Moreover, Clinical Disease Activity Index (CDAI) was also improved in JAK inhibitor than IL-6 (IL-6: -6.6 vs JAK: -10.9, p= 0.026) at week 4. However, pain VAS and patient global VAS were not significantly different in each group in week4. TJC, HAQ and CDAI was not different in both groups at week 12 and week 24. On the other hand, ESR was significantly decreased in IL-6 inhibitor than JAK inhibitor at week 4, 12 and 24 (IL-6: -26.6 vs JAK: -14.1, p=0.018 at week 4, IL-6: -32.7 vs JAK: -16.5 p=0.004 at week 12, IL-6: -31.3vs JAK: -17.7 p=0.014 at week 24).ConclusionIn a comparison between IL-6 inhibitor and JAK inhibitor as a first-line molecular-targeted drug matched baseline charactristics of disease activity, TJC and HAQ was improved in JAK inhibitor earlier than IL-6 inhibitors. JAK inhibitor suppress multi cytokine that might be the reason why JAK inhibitor improve pain. Improvement of patient reported outcome in JAK inhibitor was found also in comparison with IL-6 inhibitor.References[1]Taylor PC, Keystone EC, van der Heijde D, et al. Baricitinib versus Placebo or Adalimumab in Rheumatoid Arthritis. N Engl J Med. 2017;376:652-62.[2]Fleischmann R, Pangan AL, Song IH, et al. Upadacitinib Versus Placebo or Adalimumab in Patients with Rheumatoid Arthritis and an Inadequate Response to Methotrexate: Results of a Phase III, Double-Blind, Randomized Controlled Trial. Arthritis Rheumatol. 2019;71:1788-1800.AcknowledgementsWe wish to thank Atsuko Kamiyama and Tomoko Nishimura for clinical assistant, and all member of Team RA.Disclosure of InterestsTadashi Okano Speakers bureau: Asahi Kasei, Astellas, Abbvie, Amgen, Ayumi, Chugai, Daiichi-Sankyo, Eisai, Eli Lilly, Gilead Sciences, Janssen, Kyowa Kirin, Mitsubishi Tanabe, Novartis, Ono, Pfizer, Sanofi, Takeda, UCB, Grant/research support from: Asahi Kasei, Abbvie, Chugai, Eisai, Mitsubishi Tanabe, Tatsuya Koike Speakers bureau: Takeda Pharmaceutical, Mitsubishi Tanabe Pharma Corporation, Chugai Pharmaceutical, Eisai, Abbott Japan, Teijin Pharma, Banyu Pharmaceutical and Ono Pharmaceutical, Kentaro Inui Speakers bureau: Daiichi Sankyo Co. Ltd., Mitsubishi Tanabe Pharma, Janssen Pharmaceutical K.K., Astellas Pharma Inc., Takeda Pharmaceutical Co. Ltd., Ono Pharmaceutical Co. Ltd., Abbvie GK, Pfizer Inc., Eisai Co.,Ltd., Chugai Pharmaceutical Co., Ltd., Grant/research support from: Janssen Pharmaceutical K.K., Astellas Pharma Inc., Sanofi K.K., Abbvie GK, Takeda Pharmaceutical Co. Ltd., QOL RD Co. Ltd., Mitsubishi Tanabe Pharma, Ono Pharmaceutical Co. Ltd., Eisai Co.,Ltd., Masahiro Tada: None declared, Kenji Mamoto: None declared, Yutaro Yamada: None declared, kazuki Orita: None declared, Koji Mandai: None declared, Shohei Anno: None declared, Takahiro Iida: None declared, Hiroaki Nakamura: None declared
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45. POS0681 DRUG RETENTION RATE AND EFFECTIVENESS OF JAK INHIBITOR IN PATIENTS WITH DIFFICULT-TO-TREAT RHEUMATOID ARTHRITIS
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S. Anno, T. Okano, K. Mandai, K. Orita, Y. Yamada, K. Mamoto, T. Iida, M. Tada, K. Inui, T. Koike, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundRecently, the disease activity of rheumatoid arthritis (RA) was improved due to the ‘treat-to-target’ strategy. However, some patients remain various symptoms despite recommended treatment was performed. Then, the term of ‘difficult-to-treat RA (D2TRA)’ is widely recognized. Janus kinase inhibitor (JAKi) might be effective for D2TRA patients, because JAKi can simultaneously block the function of multiple cytokines.ObjectivesThe aim of this study was to evaluate drug retention rate and effectiveness of JAKi in patients with D2TRA.MethodsThis study included 220 RA patients (tofacitinib 101, baricitinib 83, upadacitinib 20, peficitinib 14, filgotinib 2) treated with JAKi. Sixty-two patients were treated as first line bDMARDs/JAKi (1st group), 57 patients were treated as second line bDMARDs/ JAKi (2nd group), 101 patients were treated as third and more bDMARDs/ JAKi. In these 101 patients, 25 patients did not met D2TRA criteria (non-D2TRA group) and 76 patients met D2TRA criteria (D2TRA group). Drug retention rate and effectiveness of JAKi were evaluated during 24 weeks in each group.ResultsUsage rate of methotrexate was lower and dosage of glucocorticoid was higher in D2TRA group than in other groups (Table 1). Drug retention rate at 24 weeks was 87.1% (54/62) in 1st group, 80.1% (46/57) in 2nd group, 88% (22/25) in non-D2TRA group, 61.8% (47/76) in D2TRA group. Drug retention rate was lower in D2TRA group compared to 1st group, 2nd group and non-DT2RA group (pTable 1.Baseline characteristics of RA patients1st group (n=62)2nd group (n=57)non-D2TRA group (n=25)D2TRA group (n=76)Age (years)64.9 ± 14.866.1 ± 11.564.6 ± 16.163.0 ± 15.0Female (%)75.879.096.080.3Disease durations (years)10.4 ± 11.717.6 ± 17.622.6 ± 22.416.3 ± 15.7RF (IU/ml)296.3 ± 1153.8314.9 ± 1037.7262.4 ± 375.9305.9 ± 819.6RF positive ratio (%)81.878.479.275.7Anti CCP antibody (U/ml)221.8 ± 327.2157.8 ± 258.795.9 ± 101.6191.8 ± 250.6Anti CCP antibody positive ratio (%)79.679.672.283.3CRP (U/ml)1.5 ± 2.11.1 ± 2.01.6 ± 1.61.8 ± 2.9MMP-3 (ng/ml)185.7 ± 167.6146.7 ± 122.1190.1 ± 152.6268.0 ± 451.2DAS28-CRP4.3 ± 1.24.1 ± 1.33.9 ± 1.44.4 ± 1.3SDAI21.8 ± 12.221.7 ± 13.118.4 ± 13.023.9 ± 12.8CDAI20.3 ± 11.320.7 ± 12.717.6 ± 12.822.1 ± 12.2HAQ1.1 ± 0.81.2 ± 1.00.9 ± 0.81.4 ± 1.1MTX use (%)69.463.25647.4MTX (mg/day)10.7 ± 3.410.4 ± 3.58.8 ± 3.59.0 ± 4.3Glucocorticoid use (%)29.136.81646.1Glucocorticoid dose (mg/day)3.3 ± 2.13.0 ± 1.53.5 ± 1.95.1 ± 2.8ConclusionDrug retention rate of JAKi in treatment of D2TRA group were lower than that of 1st group, 2nd group, and non-D2TRA group. Clinical efficacy of JAKi in D2TRA group were not significantly different to 2nd group and non-D2TRA group. However, HAQ improvement was weak in D2TRA group.Disclosure of InterestsNone declared
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46. AB0225 FRAX ASSESSMENT IN PATIENTS WITH RHEUMATOID ARTHRITIS PREDICTED THE REAL INCIDENCE OF CLINICAL FRACTURES FOR 10 YEARS FROM THE RESULTS OF THE 10-YEAR TOMORROW STUDY
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K. Mamoto, T. Koike, T. Okano, Y. Sugioka, M. Tada, K. Inui, and H. Nakamura
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundTo investigate if FRAX in patients with RA can predict the incidence of new clinical fractures for 10 years by using the 10-year data of the TOMORROW study (UMIN000003876) which is a prospective cohort study.ObjectivesTo investigate if FRAX in patients with RA can predict the incidence of new clinical fractures for 10 years by using the 10-year data of the TOMORROW study (UMIN000003876) which is a prospective cohort study.MethodsWe calculated ten-year probability of major osteoporotic fracture (FRAX) in 208 RA patients and 205 sex- and age-matched volunteers (Vo), and compared FRAX with the incidence of clinical fractures for 10 years.ResultsThe mean FRAX were 14.5 and 8.8% in 175 RA patients and 168 Vo, respectively, in whom we could calculate FRAX at baseline and complete to investigate the incidence of clinical fractures for 10 years from baseline. The mean FRAX in RA patients was significantly higher than that in Vo (PConclusionFRAX and the incidence of clinical fractures for 10 years were significantly higher in RA patients than them of Vo. We confirmed that FRAX was the risk factor for clinical fractures in actual clinical practice.Disclosure of InterestsNone declared
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47. Superconducting fluctuations above critical temperature in the Bi2Sr2Ca1-xYxCu2O8 single crystals
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Gimazov I.I., Sakhin V.O., Talanov Yu.I., Adachi T., Noji T., Koike Y.
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Electricity and magnetism ,QC501-766 - Abstract
The superconducting fluctuations above critical temperature in the Bi2Sr2Ca1-xYxCu2O8 single crystals are studied. The boundaries of the superconducting fluctuations area are defined by the MWA measurement. The estimation of the fluctuations lifetimes is made.
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- 2016
48. Observation of Coulomb-Assisted Nuclear Bound State of Ξ^{-}-^{14}N System
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S H, Hayakawa, K, Agari, J K, Ahn, T, Akaishi, Y, Akazawa, S, Ashikaga, B, Bassalleck, S, Bleser, H, Ekawa, Y, Endo, Y, Fujikawa, N, Fujioka, M, Fujita, R, Goto, Y, Han, S, Hasegawa, T, Hashimoto, T, Hayakawa, E, Hayata, K, Hicks, E, Hirose, M, Hirose, R, Honda, K, Hoshino, S, Hoshino, K, Hosomi, S H, Hwang, Y, Ichikawa, M, Ichikawa, K, Imai, K, Inaba, Y, Ishikawa, H, Ito, K, Ito, W S, Jung, S, Kanatsuki, H, Kanauchi, A, Kasagi, T, Kawai, M H, Kim, S H, Kim, S, Kinbara, R, Kiuchi, H, Kobayashi, K, Kobayashi, T, Koike, A, Koshikawa, J Y, Lee, T L, Ma, S Y, Matsumoto, M, Minakawa, K, Miwa, A T, Moe, T J, Moon, M, Moritsu, Y, Nagase, Y, Nakada, M, Nakagawa, D, Nakashima, K, Nakazawa, T, Nanamura, M, Naruki, A N L, Nyaw, Y, Ogura, M, Ohashi, K, Oue, S, Ozawa, J, Pochodzalla, S Y, Ryu, H, Sako, S, Sato, Y, Sato, F, Schupp, K, Shirotori, M M, Soe, M K, Soe, J Y, Sohn, H, Sugimura, K N, Suzuki, H, Takahashi, T, Takahashi, T, Takeda, H, Tamura, K, Tanida, A M M, Theint, K T, Tint, Y, Toyama, M, Ukai, E, Umezaki, T, Watabe, K, Watanabe, T O, Yamamoto, S B, Yang, C S, Yoon, J, Yoshida, M, Yoshimoto, D H, Zhang, and Z, Zhang
- Abstract
In an emulsion-counter hybrid experiment performed at J-PARC, a Ξ^{-} absorption event was observed which decayed into twin single-Λ hypernuclei. Kinematic calculations enabled a unique identification of the reaction process as Ξ^{-}+^{14}N→_{Λ}^{10}Be+_{Λ}^{5}He. For the binding energy of the Ξ^{-} hyperon in the Ξ^{-}-^{14}N system a value of 1.27±0.21 MeV was deduced. The energy level of Ξ^{-} is likely a nuclear 1p state which indicates a weak ΞN-ΛΛ coupling.
- Published
- 2020
49. Transcriptional analyses of differential cultivars during resistant and susceptible interactions with Peronospora effusa, the causal agent of spinach downy mildew
- Author
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Allen Van Deynze, Amanda M. Hulse-Kemp, Steven T. Koike, Kevin Stoffel, Steven J. Klosterman, Beiquan Mou, Shyam L. Kandel, and Ainong Shi
- Subjects
0106 biological sciences ,0301 basic medicine ,Candidate gene ,Molecular biology ,Propanols ,Messenger ,lcsh:Medicine ,01 natural sciences ,Polymorphism, Single Nucleotide ,Article ,03 medical and health sciences ,Gene Expression Regulation, Plant ,Spinacia oleracea ,Gene expression ,Genetics ,RNA, Messenger ,Polymorphism ,lcsh:Science ,Gene ,Pathogen ,Disease Resistance ,Plant Diseases ,Oomycete ,Peronospora ,Multidisciplinary ,Genome ,biology ,Effector ,Gene Expression Profiling ,lcsh:R ,food and beverages ,Plant ,Single Nucleotide ,biology.organism_classification ,Gene expression profiling ,030104 developmental biology ,Infectious Diseases ,Gene Ontology ,Gene Expression Regulation ,Downy mildew ,RNA ,lcsh:Q ,Disease Susceptibility ,Plant sciences ,Transcriptome ,Genome, Plant ,010606 plant biology & botany - Abstract
Downy mildew of spinach is caused by the obligate oomycete pathogen, Peronospora effusa. The disease causes significant economic losses, especially in the organic sector of the industry where the use of synthetic fungicides is not permitted for disease control. New pathotypes of this pathogen are increasingly reported which are capable of breaking resistance. In this study, we took advantage of new spinach genome resources to conduct RNA-seq analyses of transcriptomic changes in leaf tissue of resistant and susceptible spinach cultivars Solomon and Viroflay, respectively, at an early stage of pathogen establishment (48 hours post inoculation, hpi) to a late stage of symptom expression and pathogen sporulation (168 hpi). Fold change differences in gene expression were recorded between the two cultivars to identify candidate genes for resistance. In Solomon, the hypersensitive inducible genes such as pathogenesis-related gene PR-1, glutathione-S-transferase, phospholipid hydroperoxide glutathione peroxidase and peroxidase were significantly up-regulated uniquely at 48 hpi and genes involved in zinc finger CCCH protein, glycosyltransferase, 1-aminocyclopropane-1-carboxylate oxidase homologs, receptor-like protein kinases were expressed at 48 hpi through 168 hpi. The types of genes significantly up-regulated in Solomon in response to the pathogen suggests that salicylic acid and ethylene signaling pathways mediate resistance. Furthermore, many genes involved in the flavonoid and phenylpropanoid pathways were highly expressed in Viroflay compared to Solomon at 168 hpi. As anticipated, an abundance of significantly down-regulated genes was apparent at 168 hpi, reflecting symptom development and sporulation in cultivar Viroflay, but not at 48 hpi. In the pathogen, genes encoding RxLR-type effectors were expressed during early colonization of cultivar Viroflay while crinkler-type effector genes were expressed at the late stage of the colonization. Our results provide insights on gene expression in resistant and susceptible spinach-P. effusa interactions, which can guide future studies to assess candidate genes necessary for downy mildew resistance in spinach.
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- 2020
50. Comparative genomics of downy mildews reveals potential adaptations to biotrophy
- Author
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Lien Bertier, Beiquan Mou, Richard W Michelmore, Steven J. Klosterman, Kyle Fletcher, Steven T. Koike, Frank N. Martin, Sebastian Reyes-Chin-Wo, and Lida Derevnina
- Subjects
0301 basic medicine ,Gene loss ,Medical and Health Sciences ,Peronospora effusa ,Oomycete ,Peronospora farinosa ,Phylogenomics ,Phylogeny ,2. Zero hunger ,Genetics ,Peronospora ,Likelihood Functions ,Spinach downy mildew ,biology ,food and beverages ,Genomics ,Biological Sciences ,Adaptation, Physiological ,Mitochondria ,Phytophthora ,Sequence Analysis ,Research Article ,Biotechnology ,Heterozygote ,lcsh:QH426-470 ,Bioinformatics ,Physiological ,lcsh:Biotechnology ,03 medical and health sciences ,Information and Computing Sciences ,lcsh:TP248.13-248.65 ,Adaptation ,Biotrophy ,Plant Diseases ,Synteny ,Comparative genomics ,Peronospora lineage ,Sequence Analysis, RNA ,Terminal Repeat Sequences ,Molecular Sequence Annotation ,15. Life on land ,biology.organism_classification ,lcsh:Genetics ,030104 developmental biology ,RNA ,Downy mildew - Abstract
Background Spinach downy mildew caused by the oomycete Peronospora effusa is a significant burden on the expanding spinach production industry, especially for organic farms where synthetic fungicides cannot be deployed to control the pathogen. P. effusa is highly variable and 15 new races have been recognized in the past 30 years. Results We virulence phenotyped, sequenced, and assembled two isolates of P. effusa from the Salinas Valley, California, U.S.A. that were identified as race 13 and 14. These assemblies are high quality in comparison to assemblies of other downy mildews having low total scaffold count (784 & 880), high contig N50s (48 kb & 52 kb), high BUSCO completion and low BUSCO duplication scores and share many syntenic blocks with Phytophthora species. Comparative analysis of four downy mildew and three Phytophthora species revealed parallel absences of genes encoding conserved domains linked to transporters, pathogenesis, and carbohydrate activity in the biotrophic species. Downy mildews surveyed that have lost the ability to produce zoospores have a common loss of flagella/motor and calcium domain encoding genes. Our phylogenomic data support multiple origins of downy mildews from hemibiotrophic progenitors and suggest that common gene losses in these downy mildews may be of genes involved in the necrotrophic stages of Phytophthora spp. Conclusions We present a high-quality draft genome of Peronospora effusa that will serve as a reference for Peronospora spp. We identified several Pfam domains as under-represented in the downy mildews consistent with the loss of zoosporegenesis and necrotrophy. Phylogenomics provides further support for a polyphyletic origin of downy mildews. Electronic supplementary material The online version of this article (10.1186/s12864-018-5214-8) contains supplementary material, which is available to authorized users.
- Published
- 2018
- Full Text
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