381 results on '"Szymanski W"'
Search Results
2. Towards molecular imaging-guided intervention theatres in oncology
- Author
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Vonk, J., Kruijff, S., Slart, R. H. J. A., Szymanski, W., Witjes, M. J. H., and Glaudemans, A. W. J. M.
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- 2024
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3. Synthesis and preclinical evaluation of novel 18F-vancomycin-based tracers for the detection of bacterial infections using positron emission tomography
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Spoelstra, G. B., Blok, S. N., Reali Nazario, L., Noord, L., Fu, Y., Simeth, N. A., IJpma, F. F. A., van Oosten, M., van Dijl, J. M., Feringa, B. L., Szymanski, W., and Elsinga, P. H.
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- 2024
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- View/download PDF
4. Highlight selection of radiochemistry and radiopharmacy developments by editorial board
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Toyohara, J, Vugts, D, Kiss, O, Todde, S, Li, X, Liu, Z, Yang, Z, Gillings, N, Cazzola, E, Szymanski, W, Meulen, N, Reilly, R, Taddei, C, Schirrmacher, R, Li, Z, Lagebo, Y, Bentaleb, N, Souza Albernaz, M, Lapi, S, Ramogida, C, Mukherjee, A, Ajenjo, J, Deuther-Conrad, W, Bourdeau, C, Toyohara J., Vugts D., Kiss O. C., Todde S., Li X. G., Liu Z., Yang Z., Gillings N., Cazzola E., Szymanski W., Meulen N. v. d., Reilly R., Taddei C., Schirrmacher R., Li Z., Lagebo Y. J., Bentaleb N., Souza Albernaz M. d., Lapi S., Ramogida C., Mukherjee A., Ajenjo J., Deuther-Conrad W., Bourdeau C., Toyohara, J, Vugts, D, Kiss, O, Todde, S, Li, X, Liu, Z, Yang, Z, Gillings, N, Cazzola, E, Szymanski, W, Meulen, N, Reilly, R, Taddei, C, Schirrmacher, R, Li, Z, Lagebo, Y, Bentaleb, N, Souza Albernaz, M, Lapi, S, Ramogida, C, Mukherjee, A, Ajenjo, J, Deuther-Conrad, W, Bourdeau, C, Toyohara J., Vugts D., Kiss O. C., Todde S., Li X. G., Liu Z., Yang Z., Gillings N., Cazzola E., Szymanski W., Meulen N. v. d., Reilly R., Taddei C., Schirrmacher R., Li Z., Lagebo Y. J., Bentaleb N., Souza Albernaz M. d., Lapi S., Ramogida C., Mukherjee A., Ajenjo J., Deuther-Conrad W., and Bourdeau C.
- Abstract
Background The Editorial Board of EJNMMI Radiopharmacy and Chemistry releases a biannual highlight commentary to update the readership on trends in the field of radiopharmaceutical development.Main body This selection of highlights provides commentary on 24 different topics selected by each coauthoring Editorial Board member addressing a variety of aspects ranging from novel radiochemistry to first-in-human application of novel radiopharmaceuticals.Conclusion Trends in radiochemistry and radiopharmacy are highlighted. Hot topics cover the entire scope of EJNMMI Radiopharmacy and Chemistry, demonstrating the progress in the research field in many aspects.
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- 2024
5. Targeted optical fluorescence imaging: a meta-narrative review and future perspectives
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Schouw, H. M., Huisman, L. A., Janssen, Y. F., Slart, R. H. J. A., Borra, R. J. H., Willemsen, A. T. M., Brouwers, A. H., van Dijl, J. M., Dierckx, R. A., van Dam, G. M., Szymanski, W., Boersma, H. H., and Kruijff, S.
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- 2021
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6. Triplet-Triplet Energy Transfer: A Simple Strategy for an Efficient Visible Light-Induced Photoclick Reaction
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Fu, Y., Alachouzos, G., Simeth, Nadja A., Donato, M., Hilbers, Michiel F., Buma, W.J., Szymanski, W., Feringa, Ben L., Fu, Y., Alachouzos, G., Simeth, Nadja A., Donato, M., Hilbers, Michiel F., Buma, W.J., Szymanski, W., and Feringa, Ben L.
- Abstract
Contains fulltext : 306181.pdf (Publisher’s version ) (Open Access)
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- 2024
7. Highlight selection of radiochemistry and radiopharmacy developments by editorial board
- Author
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Toyohara, J., Vugts, D., (0000-0001-7431-0026) Kiß, O., Todde, S., Li, X.-G., Liu, Z., Yang, Z., Gillings, N., Cazzola, E., Szymanski, W., Meulen, N., Reilly, R., Taddei, C., Schirrmacher, R., Li, Z., Lagebo, Y. J., Bentaleb, N., Souza Albernaz, M., Lapi, S., Ramogida, C., Mukherjee, A., Ajenjo, J., (0000-0003-3168-3062) Deuther-Conrad, W., Bourdeau, C., Toyohara, J., Vugts, D., (0000-0001-7431-0026) Kiß, O., Todde, S., Li, X.-G., Liu, Z., Yang, Z., Gillings, N., Cazzola, E., Szymanski, W., Meulen, N., Reilly, R., Taddei, C., Schirrmacher, R., Li, Z., Lagebo, Y. J., Bentaleb, N., Souza Albernaz, M., Lapi, S., Ramogida, C., Mukherjee, A., Ajenjo, J., (0000-0003-3168-3062) Deuther-Conrad, W., and Bourdeau, C.
- Abstract
Background: The Editorial Board of EJNMMI Radiopharmacy and Chemistry releases a biannual highlight commentary to update the readership on trends in the field of radiopharmaceutical development. Main Body: This selection of highlights provides commentary on 24 different topics selected by each coauthoring Editorial Board member addressing a variety of aspects ranging from novel radiochemistry to first-in-human application of novel radiopharmaceuticals. Conclusion: Trends in radiochemistry and radiopharmacy are highlighted. Hot topics cover the entire scope of EJNMMI Radiopharmacy and Chemistry, demonstrating the progress in the research field in many aspects.
- Published
- 2024
8. Pure infiniteness and ideal structure of $C^*$-algebras associated to Fell bundles
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Kwaśniewski, B. K. and Szymański, W.
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Mathematics - Operator Algebras ,46L05 - Abstract
We investigate structural properties of the reduced cross-sectional algebra $C^*_r(\mathcal{B})$ of a Fell bundle $\mathcal{B}$ over a discrete group $G$. Conditions allowing one to determine the ideal structure of $C^*_r(\mathcal{B})$ are studied. Notions of aperiodicity, paradoxicality and $\mathcal{B}$-infiniteness for the Fell bundle $\mathcal{B}$ are introduced and investigated by themselves and in relation to the partial dynamical system dual to $\mathcal{B}$. Several criteria of pure infiniteness of $C^*_r(\mathcal{B})$ are given. It is shown that they generalize and unify corresponding results obtained in the context of crossed products, by the following duos: Laca, Spielberg; Jolissaint, Robertson; Sierakowski, R{\o}rdam; Giordano, Sierakowski and Ortega, Pardo. For exact, separable Fell bundles satisfying the residual intersection property primitive ideal space of $C^*_r(\mathcal{B})$ is determined. The results of the paper are shown to be optimal when applied to graph $C^*$-algebras. Applications to a class of Exel-Larsen crossed products are presented., Comment: This is the version accepted to Journal of Mathematical Analysis and Applications. Pure infiniteness criteria have been generalized. In particular, now they unify the corresponding results of Jolissaint, Robertson and Sierakowski, R{\o}rdam
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- 2015
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9. Synthesis and preclinical evaluation of novel 18F-vancomycin-based tracers for the detection of bacterial infections using positron emission tomography.
- Author
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Spoelstra, G. B., Blok, S. N., Reali Nazario, L., Noord, L., Fu, Y., Simeth, N. A., IJpma, F. F. A., van Oosten, M., van Dijl, J. M., Feringa, B. L., Szymanski, W., and Elsinga, P. H.
- Subjects
POSITRON emission tomography ,BACTERIAL diseases ,SOFT tissue infections ,METHICILLIN-resistant staphylococcus aureus ,GRAM-positive bacteria - Abstract
Introduction: Bacterial infections are a major problem in medicine, and the rapid and accurate detection of such infections is essential for optimal patient outcome. Bacterial infections can be diagnosed by nuclear imaging, but most currently available modalities are unable to discriminate infection from sterile inflammation. Bacteria-targeted positron emission tomography (PET) tracers have the potential to overcome this hurdle. In the present study, we compared three
18 F-labelled PET tracers based on the clinically applied antibiotic vancomycin for targeted imaging of Gram-positive bacteria. Methods: [18 F]FB-NHS and [18 F]BODIPY-FL-NHS were conjugated to vancomycin. The resulting conjugates, together with our previously developed [18 F]PQ-VE1-vancomycin, were tested for stability, lipophilicity, selective binding to Gram-positive bacteria, antimicrobial activity and biodistribution. For the first time, the pharmacokinetic properties of all three tracers were compared in healthy animals to identify potential binding sites. Results: [18 F]FB-vancomycin, [18 F]BODIPY-FL-vancomycin, and [18 F]PQ-VE1-vancomycin were successfully synthesized with radiochemical yields of 11.7%, 2.6%, and 0.8%, respectively. [18 F]FB-vancomycin exhibited poor in vitro and in vivo stability and, accordingly, no bacterial binding. In contrast, [18 F]BODIPY-FL-vancomycin and [18 F]PQ-VE1-vancomycin showed strong and specific binding to Gram-positive bacteria, including methicillin-resistant Staphylococcus aureus (MRSA), which was outcompeted by unlabeled vancomycin only at concentrations exceeding clinically relevant vancomycin blood levels. Biodistribution showed renal clearance of [18 F]PQ-VE1-vancomycin and [18 F]BODIPY-FL-vancomycin with low non-specific accumulation in muscles, fat and bones. Conclusion: Here we present the synthesis and first evaluation of the vancomycin-based PET tracers [18 F]BODIPY-FL-vancomycin and [18 F]PQ-VE1-vancomycin for image-guided detection of Gram-positive bacteria. Our study paves the way towards real-time bacteria-targeted diagnosis of soft tissue and implant-associated infections that are oftentimes caused by Gram-positive bacteria, even after prophylactic treatment with vancomycin. [ABSTRACT FROM AUTHOR]- Published
- 2024
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10. The effect of low content additives on strength, resistivity and microstructural changes in wire drawing of 1xxx series aluminium alloys for electrical purposes
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Koprowski, P., Lech-Grega, M., Wodziński, Ł., Augustyn, B., Boczkal, S., Ożóg, M., Uliasz, P., Żelechowski, J., and Szymański, W.
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- 2020
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11. Topological aperiodicity for product systems over semigroups of Ore type
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Kwasniewski, B. K. and Szymanski, W.
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Mathematics - Operator Algebras ,46L05 - Abstract
We prove a version of uniqueness theorem for Cuntz-Pimsner algebras of discrete product systems over semigroups of Ore type. To this end, we introduce Doplicher-Roberts picture of Cuntz-Pimsner algebras, and the semigroup dual to a product system of 'regular' C*-correspondences. Under a certain aperiodicity condition on the latter, we obtain the uniqueness theorem and a simplicity criterion for the algebras in question. These results generalize the corresponding ones for crossed products by discrete groups, due to Archbold and Spielberg, and for Exel's crossed products, due to Exel and Vershik. They also give interesting conditions for topological higher rank graphs and $P$-graphs, and apply to the new Cuntz C*-algebra $\mathcal{Q}_\mathbb{N}$ arising from the "$ax+b$"-semigroup over $\mathbb{N}$., Comment: 37 pages
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- 2013
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12. Tribological and corrosive investigations of perfluoro and alkylphosphonic self-assembled monolayers on Ti incorporated carbon coatings
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Cichomski, M., Burnat, B., Prowizor, M., Jedrzejczak, A., Batory, D., Piwoński, I., Kozłowski, W., Szymanski, W., and Dudek, M.
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- 2019
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13. Towards molecular imaging-guided intervention theatres in oncology
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Vonk, J., primary, Kruijff, S., additional, Slart, R. H. J. A., additional, Szymanski, W., additional, Witjes, M. J. H., additional, and Glaudemans, A. W. J. M., additional
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- 2023
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14. Evaluation of mechanical properties of carbon coatings synthesised in radio frequency plasma on PDMS
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Kaczorowski, W., Gajewski, K., Szymanski, W., Batory, D., Wojciechowska, A., Swiatek, L., Gotszalk, T., and Niedzielski, P.
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- 2018
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15. Graph C*-algebras and Z/2Z-quotients of quantum spheres
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Hajac, P. M., Matthes, R., and Szymanski, W.
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Mathematics - Quantum Algebra ,Mathematics - K-Theory and Homology ,Mathematics - Operator Algebras - Abstract
We consider two Z/2Z-actions on the Podles generic quantum spheres. They yield, as noncommutative quotient spaces, the Klimek-Lesniewski q-disc and the quantum real projective space, respectively. The C*-algebras of all these quantum spaces are described as graph C*-algebras. The K-groups of the thus presented C*-algebras are then easily determined from the general theory of graph C*-algebras. For the quantum real projective space, we also recall the classification of the classes of irreducible *-representations of its algebra and give a linear basis for this algebra., Comment: 8 pages, latex2e
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- 2002
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16. A Locally Trivial Quantum Hopf Fibration
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Hajac, P. M., Matthes, R., and Szymanski, W.
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Mathematics - Quantum Algebra ,Mathematics - Operator Algebras - Abstract
The irreducible *-representations of the polynomial algebra O(S^3_{pq}) of the quantum 3-sphere introduced by Calow and Matthes are classified. The K-groups of its universal C*-algebra are shown to coincide with their classical counterparts. The U(1)-action on O(S^3_{pq}) corresponding for p=1=q to the classical Hopf fibration is proven to be Galois (free). The thus obtained locally trivial Hopf-Galois extension is shown to be relatively projective (admitting a strong connection) and non-cleft. The latter is proven by determining an appropriate Chern-Connes pairing., Comment: latex 2e, 23 pages in A4
- Published
- 2001
17. The Structure and Properties of Wrought Aluminium Alloys Series 6xxx with Vanadium for Automotive Industry'
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Lech-Grega, Marzena, Szymański, W., Płonka, B., Boczkal, S., Gawlik, M., Bigaj, M., Korczak, P., and Sadler, Barry A., editor
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- 2016
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18. Carbon coatings with high concentrations of silicon deposited by RF PECVD method at relatively high self-bias
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Jedrzejczak, A., Batory, D., Dominik, M., Smietana, M., Cichomski, M., Szymanski, W., Bystrzycka, E., Prowizor, M., Kozlowski, W., and Dudek, M.
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- 2017
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19. Chemical composition of radiolytically formed particles using single-particle mass spectrometry
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Wonaschuetz, A., Kallinger, P., Szymanski, W., and Hitzenberger, R.
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- 2017
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20. Friction and wear of a-C:H:SiOx coatings in combination with AISI 316L and ZrO2 counterbodies
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Jedrzejczak, A., Kolodziejczyk, L., Szymanski, W., Piwonski, I., Cichomski, M., Kisielewska, A., Dudek, M., and Batory, D.
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- 2017
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21. Plasma nitriding of Ti6Al4V alloy for improved water erosion resistance
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Batory, D., Szymanski, W., Panjan, M., Zabeida, O., and Klemberg-Sapieha, J.E.
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- 2017
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22. High strength metallurgical graphene as an additional reinforcing phase for carbon fibre composites
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Kunikowska, A., Szymanski, W., Jedrzejczak, A., Lipa, S., Galazka, M., Szlachetka, M., and Kula, P.
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- 2020
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23. Mechanistic Basis for Red Light Switching of Azonium Ions
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Medved’, M., Di Donato, M., Buma, W.J., Laurent, A.D., Lameijer, L., Hrivnák, T., Romanov, I., Tran, S., Feringa, B.L., Szymanski, W., Woolley, G.A., Medved’, M., Di Donato, M., Buma, W.J., Laurent, A.D., Lameijer, L., Hrivnák, T., Romanov, I., Tran, S., Feringa, B.L., Szymanski, W., and Woolley, G.A.
- Abstract
Contains fulltext : 296755.pdf (Publisher’s version ) (Closed access)
- Published
- 2023
24. Establishing PQ-ERA photoclick reactions with unprecedented efficiency by engineering of the nature of the phenanthraquinone triplet state
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Fu, Y., Alachouzos, G., Simeth, N.A., Di Donato, M., Hilbers, M.F., Buma, W.J., Szymanski, W., Feringa, B.L., Fu, Y., Alachouzos, G., Simeth, N.A., Di Donato, M., Hilbers, M.F., Buma, W.J., Szymanski, W., and Feringa, B.L.
- Abstract
06 juli 2023, Contains fulltext : 294922.pdf (Publisher’s version ) (Open Access)
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- 2023
25. Mechanical characterization of a-C:H:SiOx coatings synthesized using radio-frequency plasma-assisted chemical vapor deposition method
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Batory, D., Jedrzejczak, A., Szymanski, W., Niedzielski, P., Fijalkowski, M., Louda, P., Kotela, I., Hromadka, M., and Musil, J.
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- 2015
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26. Influence of the process parameters on the characteristics of silicon-incorporated a-C:H:SiOx coatings
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Batory, D., Jedrzejczak, A., Kaczorowski, W., Szymanski, W., Kolodziejczyk, L., Clapa, M., and Niedzielski, P.
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- 2015
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27. Silver implanted diamond-like carbon coatings
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Batory, D., Gorzedowski, J., Rajchel, B., Szymanski, W., and Kolodziejczyk, L.
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- 2014
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28. Nanopartikel und Nanoaerosole — Messmethoden
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Szymanski, W. W., Allmaier, G., Gazsó, André, editor, Greßler, Sabine, editor, and Schiemer, Fritz, editor
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- 2007
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29. Distribution, Morphology, and Chemical Composition of Fe-Mn Nodules in Albeluvisols of the Carpathian Foothills, Poland
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SZYMAŃSKI, W. and SKIBA, M.
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- 2013
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30. CrCN/CrN+ta-C multilayer coating for applications in wood processing
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Gilewicz, A., Warcholinski, B., Szymanski, W., and Grimm, W.
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- 2013
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31. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
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Brown, P, Zhou, Y, Tan, A, El-Esawi, M, Liehr, T, Blanck, O, Gladue, D, Almeida, G, Cernava, T, Sorzano, C, Yeung, A, Engel, M, Chandrasekaran, A, Muth, T, Staege, M, Daulatabad, S, Widera, D, Zhang, J, Meule, A, Honjo, K, Pourret, O, Yin, C, Zhang, Z, Cascella, M, Flegel, W, Goodyear, C, van Raaij, M, Bukowy-Bieryllo, Z, Campana, L, Kurniawan, N, Lalaouna, D, Huttner, F, Ammerman, B, Ehret, F, Cobine, P, Tan, E, Han, H, Xia, W, Mccrum, C, Dings, R, Marinello, F, Nilsson, H, Nixon, B, Voskarides, K, Yang, L, Costa, V, Bengtsson-Palme, J, Bradshaw, W, Grimm, D, Kumar, N, Martis, E, Prieto, D, Sabnis, S, Amer, S, Liew, A, Perco, P, Rahimi, F, Riva, G, Zhang, C, Devkota, H, Ogami, K, Basharat, Z, Fierz, W, Siebers, R, Tan, K, Boehme, K, Brenneisen, P, Brown, J, Dalrymple, B, Harvey, D, Ng, G, Werten, S, Bleackley, M, Dai, Z, Dhariwal, R, Gelfer, Y, Hartmann, M, Miotla, P, Tamaian, R, Govender, P, Gurney-Champion, O, Kauppila, J, Zhang, X, Echeverria, N, Subhash, S, Sallmon, H, Tofani, M, Bae, T, Bosch, O, Cuiv, P, Danchin, A, Diouf, B, Eerola, T, Evangelou, E, Filipp, F, Klump, H, Kurgan, L, Smith, S, Terrier, O, Tuttle, N, Ascher, D, Janga, S, Schulte, L, Becker, D, Browngardt, C, Bush, S, Gaullier, G, Ide, K, Meseko, C, Werner, G, Zaucha, J, Al-Farha, A, Greenwald, N, Popoola, S, Rahman, S, Xu, J, Yang, S, Hiroi, N, Alper, O, Baker, C, Bitzer, M, Chacko, G, Debrabant, B, Dixon, R, Forano, E, Gilliham, M, Kelly, S, Klempnauer, K, Lidbury, B, Lin, M, Lynch, I, Ma, W, Maibach, E, Mather, D, Nandakumar, K, Ohgami, R, Parchi, P, Tressoldi, P, Xue, Y, Armitage, C, Barraud, P, Chatzitheochari, S, Coelho, L, Diao, J, Doxey, A, Gobet, A, Hu, P, Kaiser, S, Mitchell, K, Salama, M, Shabalin, I, Song, H, Stevanovic, D, Yadollahpour, A, Zeng, E, Zinke, K, Alimba, C, Beyene, T, Cao, Z, Chan, S, Gatchell, M, Kleppe, A, Piotrowski, M, Torga, G, Woldesemayat, A, Cosacak, M, Haston, S, Ross, S, Williams, R, Wong, A, Abramowitz, M, Effiong, A, Lee, S, Abid, M, Agarabi, C, Alaux, C, Albrecht, D, Atkins, G, Beck, C, Bonvin, A, Bourke, E, Brand, T, Braun, R, Bull, J, Cardoso, P, Carter, D, Delahay, R, Ducommun, B, Duijf, P, Epp, T, Eskelinen, E, Fallah, M, Farber, D, Fernandez-Triana, J, Feyerabend, F, Florio, T, Friebe, M, Furuta, S, Gabrielsen, M, Gruber, J, Grybos, M, Han, Q, Heinrich, M, Helantera, H, Huber, M, Jeltsch, A, Jiang, F, Josse, C, Jurman, G, Kamiya, H, de Keersmaecker, K, Kristiansson, E, de Leeuw, F, Li, J, Liang, S, Lopez-Escamez, J, Lopez-Ruiz, F, Marchbank, K, Marschalek, R, Martin, C, Miele, A, Montagutelli, X, Morcillo, E, Nicoletti, R, Niehof, M, O'Toole, R, Ohtomo, T, Oster, H, Palma, J, Paterson, R, Peifer, M, Portilla, M, Portillo, M, Pritchard, A, Pusch, S, Raghava, G, Roberts, N, Ross, K, Schuele, B, Sergeant, K, Shen, J, Stella, A, Sukocheva, O, Uversky, V, Vanneste, S, Villet, M, Viveiros, M, Vorholt, J, Weinstock, C, Yamato, M, Zabetakis, I, Zhao, X, Ziegler, A, Aizat, W, Atlas, L, Bridges, K, Chakraborty, S, Deschodt, M, Domingues, H, Esfahlani, S, Falk, S, Guisado, J, Kane, N, Kueberuwa, G, Lau, C, Liang, D, Liu, E, Luu, A, Ma, C, Ma, L, Moyer, R, Norris, A, Panthee, S, Parsons, J, Peng, Y, Pinto, I, Reschke, C, Sillanpaa, E, Stewart, C, Uhle, F, Yang, H, Zhou, K, Zhu, S, Ashry, M, Bergsland, N, Berthold, M, Chen, C, Colella, V, Cuypers, M, Eskew, E, Fan, X, Gajda, M, Gonzalezlez-Prendes, R, Goodin, A, Graham, E, Groen, E, Gutierrez-Sacristan, A, Habes, M, Heffler, E, Higginbottom, D, Janzen, T, Jayaraman, J, Jibb, L, Jongen, S, Kinyanjui, T, Koleva-Kolarova, R, Li, Z, Liu, Y, Lund, B, Lussier, A, Mier, P, Moore, M, Nagler, K, Orme, M, Pearson, J, Prajapati, A, Saito, Y, Troder, S, Uchendu, F, Verloh, N, Voutchkova, D, Abu-Zaid, A, Bakkach, J, Baumert, P, Dono, M, Hanson, J, Herbelet, S, Hobbs, E, Kulkarni, A, Liu, S, Loft, N, Reddan, T, Senghore, T, Vindin, H, Xu, H, Bannon, R, Chen, B, Cheung, J, Cooper, J, Esnakula, A, Feghali, K, Ghelardi, E, Gnasso, A, Horbar, J, Lai, H, Ma, R, Pan, Z, Peres, M, Pranata, R, Seow, E, Sydes, M, Testoni, I, Westermair, A, Yang, Y, Afnan, M, Albiol, J, Albuquerque, L, Amir, S, Amiya, E, Amorim, R, An, Q, Andersen, S, Aplin, J, Argyropoulos, C, Asmann, Y, Assaeed, A, Atanasov, A, Atchison, D, Avery, S, Avillach, P, Baade, P, Backman, L, Badie, C, Baldi, A, Ball, E, Bardot, O, Barnett, A, Basner, M, Batra, J, Bazanova, O, Beale, A, Beddoe, T, Bell, M, Berezikov, E, Berners-Price, S, Bernhardt, P, Berry, E, Bessa, T, Billington, C, Birch, J, Blakely, R, Blaskovich, M, Blum, R, Boelaert, M, Bogdanos, D, Bosch, C, Bourgoin, T, Bouvard, D, Boykin, L, Bradley, G, Braun, D, Brownlie, J, Bruhl, A, Burt, A, Butler, L, Byrareddy, S, Byrne, H, Cabantous, S, Calatayud, S, Candal, E, Carlson, K, Casillas, S, Castelvetro, V, Caswell, P, Cavalli, G, Cerovsky, V, Chagoyen, M, Chen, D, Chen, H, Chen, J, Chen, Y, Cheng, C, Cheng, J, Chinapaw, M, Chinopoulos, C, Cho, W, Chong, L, Chowdhury, D, Chwalibog, A, Ciresi, A, Cockcroft, S, Conesa, A, Cook, P, Cooper, D, Coqueret, O, 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O., Bach-Mortensen A., Baltiansky L., Bartas M., Belachew K. Y., Bhardwaj V., Binder K., Bland N. S., Boah M., Bullen B., Calabro G. E., Callahan T. J., Cao B., Chalmers K., Chang W., Che Z., Chen A. T. Y., Chen Z., Choi Y., Chowdhury M. A. K., Christensen M. R., Cooke R. S. C., Cottini M., Covington N. V., Cunningham C., Delarocque J., Devos L., Dhar A. R., Ding K. -F., Dong K., Dong Z., Dreyer N., Ekstrand C., Fardet T., Feleke B. E., Feurer T., Freitas A., Gao T., Giganti F., Grabowski P., Guerra-Mora J. R., Guo C., Guo X., Gupta H., He S., Heijne M., Heinemann S., Hogrebe A., Huang Z., Iskander-Rizk S., Iyer L. M., Jahan Y., James A. S., Joel E., Joffroy B., Jegousse C., Kambondo G., Karnati P., Kaya C., Ke A., Kelly D., Kickert R., Kidibule P. E., Kieselmann J. P., Kim H. J., Kitazawa T., Lamberts A., Liang H., Linn S. N., Litfin T., Liusuo W., Lygirou V., Mahato A. K., Mai Z. -M., Major R. W., Mali S., Mallis P., Mao W., Marvin-Dowle K., Mason L. D., Merideth B., Merino-Plaza M. J., Merlaen B., Messina R., Mishra A. K., Muhammad J., Musinguzi C., Nanou A., Naqash A., Nguyen J. T., Nguyen T. T. H., Ni D., Notcovich S., Ohst B., Ollivier Q. R., Osses D. F., Peng X., Plantinga A., Pulia M., Rafiq M., Raman A., Rawski R., Ray A., Razak L. A., Rudolf K., Rusch P., Sadoine M. L., Schmidt A., Schurr R., Searles S., Sharma S., Sheehan B., Shi C., Shohayeb B., Sommerlad A., Strehlow J., Sun X., Sundar R., Taherzadeh G., Tahir N. D. M., Tang J., Testa J., Tian Z., Tingting Q., Verheijen G. P., Vickstrom C., Wang T., Wang X., Wang Z., Wei P., Wilson A., Yassine A. -A., Yousefzadeh A., Zare A., Zeng Z., Zhang H., Zhou J., Zhu D., Adamo V., Adeyemo A. A., Aggelidou M., Al-Owaifeer A. M., Al-Riyami A. Z., Alzghari S. K., Andersen V., Angus K., Asaduzzaman M., Asady H., Ato D., Bai X., Baines R. L., Ballantyne M., Ban B., Beck J., Ben-Nafa W., Black E., Blancher A., Blankstein R., Bodagh N., Borges P., Brooks A., Brox-Ponce J., Brunetti A., Canham C. D., Carninci P., Carvajal R., Chang S. C., Chao J., Chatterjee P., Chen L., Chhatriwalla A. K., Chikowe I., Chuang T. -J., Collevatti R. G., Cornejo D. A. V., Cuenda A., Dao M., Dauga D., Deng Z., Devkota K., Doan L. V., Elewa Y. H. A., Fan D., Faruk M., Feifei S., Ferguson T. S., Fleres F., Foster E. J., Foster S., Furer T., Gao Y., Garcia-Rivera E. J., Gazdar A., George R. B., Ghosh S., Gianchecchi E., Gleason J. M., Hackshaw A., Hall A., Hall R., Harper P., Hogg W. E., Huang G., Hunter K. E., Ijzerman A. P., Jesus C., Jian G., Lewis J. S., Kanj S. S., Kaur H., Kheir F., Kichatova V. S., Kiyani M., Klein R., Kovesi T., Kraschnewski J. L., Kumar A. P., Labutin D., Lazo-Langner A., Leclercq G., Li M., Li Q., Li T., Liao W. -T., Liao Z. -Y., Lin J., Lizer J., Lobreglio G., Lowies C., Lu C., Majeed H., Martin A., Martinez-Sobrido L., Meresh E., Middelveen M., Mohebbi A., Mota J., Mozaheb Z., Muyaya L., Nandhakumar A., Ng S. H. 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- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science.
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- 2019
32. Anti-wear multilayer coatings based on chromium nitride for wood machining tools
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Gilewicz, A., Warcholinski, B., Myslinski, P., and Szymanski, W.
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- 2010
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33. Phenylimino Indolinone: A Green-Light-Responsive T-Type Photoswitch Exhibiting Negative Photochromism
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Crespi, Stefano, Simeth, Nadja A., Donato, M., Doria, Sandra, Stindt, Charlotte N., Hilbers, Michiel F., Buma, W.J., Feringa, Ben L., Szymanski, W., Crespi, Stefano, Simeth, Nadja A., Donato, M., Doria, Sandra, Stindt, Charlotte N., Hilbers, Michiel F., Buma, W.J., Feringa, Ben L., and Szymanski, W.
- Abstract
Contains fulltext : 240091.pdf (Publisher’s version ) (Open Access)
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- 2021
34. Tailoring the optical and dynamic properties of iminothioindoxyl photoswitches through acidochromism
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Medved', M., Hoorens, M.W.H., Donato, M., Laurent, A., Fan, J., Taddei, M., Buma, W.J., Szymanski, W., Medved', M., Hoorens, M.W.H., Donato, M., Laurent, A., Fan, J., Taddei, M., Buma, W.J., and Szymanski, W.
- Abstract
Contains fulltext : 233529.pdf (Publisher’s version ) (Open Access)
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- 2021
35. Highlight selection of radiochemistry and radiopharmacy developments by editorial board
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Alves, F., Antunes, I., Cazzola, E., Cleeren, F., Cornelissen, B., Denkova, A., Engle, J., Faivre-Chauvet, A., Gillings, N., Hendrikx, J., Jalilian, A., Meulen, N., Mikolajczak, R., (0000-0001-7431-0026) Neels, O., Pillai, M., Reilly, R., Rubow, S., Seimbille, Y., Spreckelmeyer, S., Szymanski, W., Taddei, C., Alves, F., Antunes, I., Cazzola, E., Cleeren, F., Cornelissen, B., Denkova, A., Engle, J., Faivre-Chauvet, A., Gillings, N., Hendrikx, J., Jalilian, A., Meulen, N., Mikolajczak, R., (0000-0001-7431-0026) Neels, O., Pillai, M., Reilly, R., Rubow, S., Seimbille, Y., Spreckelmeyer, S., Szymanski, W., and Taddei, C.
- Abstract
Background: The Editorial Board of EJNMMI Radiopharmacy and Chemistry releases a biyearly highlight commentary to update the readership on trends in the field of radiopharmaceutical development. Results: This commentary of highlights has resulted in 21 different topics selected by each member of the Editorial Board addressing a variety of aspects ranging from novel radiochemistry to first in man application of novel radiopharmaceuticals. Also the first contribution in relation to MRI-agents is included. Conclusion: Trends in (radio)chemistry and radiopharmacy are highlighted demonstrating the progress in the research field being the scope of EJNMMI Radiopharmacy and Chemistry.
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- 2021
36. Sampling and Characterization of PM-fractions of Ambient Particulate Matter in Bangkok Utilizing a Cascade Virtual Impactor
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Prasserttachato, T., Podgorski, A., Luckner, J. H., Furuuchi, M., Gradon, L., Suvachittanont, S., and Szymanski, W. W.
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- 2006
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37. 7.8 Hydrolysis and Reverse Hydrolysis: Halohydrin Dehalogenases
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Schallmey, M., primary, Floor, R.J., additional, Szymanski, W., additional, and Janssen, D.B., additional
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- 2012
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38. Blood platelets in contact with nanocrystalline diamond surfaces
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Okrój, W., Kamińska, M., Klimek, L., Szymański, W., and Walkowiak, B.
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- 2006
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39. Supramolecular interactions between polylactide and model cyclosiloxanes with hydrogen bonding-capable functional groups
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Herc, A. S., primary, Wlodarska, M., additional, Nowacka, M., additional, Bojda, J., additional, Szymanski, W., additional, and Kowalewska, A., additional
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- 2020
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40. Catalytic ketonization over oxide catalysts: X. Transformations of various alkyl heptanoates
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Gliński, M., Szymański, W., and Łomot, D.
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- 2005
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41. The NSL complex maintains nuclear architecture stability via lamin A/C acetylation
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Karoutas, A., Szymanski, W., Rausch, T., Guhathakurta, S., Rog-Zielinska, E. A., Peyronnet, R., Seyfferth, J., Chen, H. R., de Leeuw, R., Herquel, B., Kimura, Hiroshi, Mittler, G., Kohl, P., Medalia, O., Korbel, J. O., Akhtar, A., University of Zurich, and Akhtar, Asifa
- Subjects
Genome instability ,Cell Nucleus/metabolism/*ultrastructure ,610 Medicine & health ,Epigenesis, Genetic ,Histones ,1307 Cell Biology ,03 medical and health sciences ,Histone H3 ,Mice ,Nuclear Proteins/genetics/*metabolism ,0302 clinical medicine ,Heterochromatin ,10019 Department of Biochemistry ,Animals ,Epigenetics ,Histones/genetics/metabolism ,Cells, Cultured ,Histone Acetyltransferases ,030304 developmental biology ,Cell Nucleus ,Mice, Knockout ,0303 health sciences ,Chemistry ,fungi ,Histone Acetyltransferases/genetics/*metabolism ,Nuclear Proteins ,Acetylation ,Cell Biology ,Fibroblasts ,Lamin Type A ,Cell biology ,Mice, Inbred C57BL ,Lamin Type A/chemistry/genetics/*metabolism ,030220 oncology & carcinogenesis ,Acetyltransferase ,Nuclear lamina ,570 Life sciences ,biology ,Lamin ,NSL complex - Abstract
While nuclear lamina abnormalities are hallmarks of human diseases, their interplay with epigenetic regulators and precise epigenetic landscape remain poorly understood. Here, we show that loss of the lysine acetyltransferase MOF or its associated NSL-complex members KANSL2 or KANSL3 leads to a stochastic accumulation of nuclear abnormalities with genomic instability patterns including chromothripsis. SILAC-based MOF and KANSL2 acetylomes identified lamin A/C as an acetylation target of MOF. HDAC inhibition or acetylation-mimicking lamin A derivatives rescue nuclear abnormalities observed in MOF-deficient cells. Mechanistically, loss of lamin A/C acetylation resulted in its increased solubility, defective phosphorylation dynamics and impaired nuclear mechanostability. We found that nuclear abnormalities include EZH2-dependent histone H3 Lys 27 trimethylation and loss of nascent transcription. We term this altered epigenetic landscape “heterochromatin enrichment in nuclear abnormalities” (HENA). Collectively, the NSL-complex-dependent lamin A/C acetylation provides a mechanism that maintains nuclear architecture and genome integrity. Karoutas et al. report lamin A/C as a non-histone target for the acetyltransferase MOF. They find that lamin A/C acetylation prevents nuclear envelope rupture and maintains nuclear integrity.
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- 2019
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42. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
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Brown, P. Zhou, Y. Tan, A.-C. El-Esawi, M.A. Liehr, T. Blanck, O. Gladue, D.P. Almeida, G.M.F. Cernava, T. Sorzano, C.O. Yeung, A.W.K. Engel, M.S. Chandrasekaran, A.R. Muth, T. Staege, M.S. Daulatabad, S.V. Widera, D. Zhang, J. Meule, A. Honjo, K. Pourret, O. Yin, C.-C. Zhang, Z. Cascella, M. Flegel, W.A. Goodyear, C.S. van Raaij, M.J. Bukowy-Bieryllo, Z. Campana, L.G. Kurniawan, N.A. Lalaouna, D. Hüttner, F.J. Ammerman, B.A. Ehret, F. Cobine, P.A. Tan, E.-C. Han, H. Xia, W. McCrum, C. Dings, R.P.M. Marinello, F. Nilsson, H. Nixon, B. Voskarides, K. Yang, L. Costa, V.D. Bengtsson-Palme, J. Bradshaw, W. Grimm, D.G. Kumar, N. Martis, E. Prieto, D. Sabnis, S.C. Amer, S.E.D.R. Liew, A.W.C. Perco, P. Rahimi, F. Riva, G. Zhang, C. Devkota, H.P. Ogami, K. Basharat, Z. Fierz, W. Siebers, R. Tan, K.H. Boehme, K.A. Brenneisen, P. Brown, J.A.L. Dalrymple, B.P. Harvey, D.J. Ng, G. Werten, S. Bleackley, M. Dai, Z. Dhariwal, R. Gelfer, Y. Hartmann, M.D. Miotla, P. Tamaian, R. Govender, P. Gurney-Champion, O.J. Kauppila, J.H. Zhang, X. Echeverría, N. Subhash, S. Sallmon, H. Tofani, M. Bae, T. Bosch, O. Cuív, P.O. Danchin, A. Diouf, B. Eerola, T. Evangelou, E. Filipp, F. Klump, H. Kurgan, L. Smith, S.S. Terrier, O. Tuttle, N. Ascher, D.B. Janga, S.C. Schulte, L.N. Becker, D. Browngardt, C. Bush, S.J. Gaullier, G. Ide, K. Meseko, C. Werner, G.D.A. Zaucha, J. Al-Farha, A.A. Greenwald, N.F. Popoola, S.I. Rahman, S. Xu, J. Yang, S.Y. Hiroi, N. Alper, O.M. Baker, C.I. Bitzer, M. Chacko, G. Debrabant, B. Dixon, R. Forano, E. Gilliham, M. Kelly, S. Klempnauer, K.-H. Lidbury, B.A. Lin, M.Z. Lynch, I. Ma, W. Maibach, E.W. Mather, D.E. Nandakumar, K.S. Ohgami, R.S. Parchi, P. Tressoldi, P. Xue, Y. Armitage, C. Barraud, P. Chatzitheochari, S. Coelho, L.P. Diao, J. Doxey, A.C. Gobet, A. Hu, P. Kaiser, S. Mitchell, K.M. Salama, M.F. Shabalin, I.G. Song, H. Stevanovic, D. Yadollahpour, A. Zeng, E. Zinke, K. Alimba, C.G. Beyene, T.J. Cao, Z. Chan, S.S. Gatchell, M. Kleppe, A. Piotrowski, M. Torga, G. Woldesemayat, A.A. Cosacak, M.I. Haston, S. Ross, S.A. Williams, R. Wong, A. Abramowitz, M.K. Effiong, A. Lee, S. Abid, M.B. Agarabi, C. Alaux, C. Albrecht, D.R. Atkins, G.J. Beck, C.R. Bonvin, A.M.J.J. Bourke, E. Brand, T. Braun, R.J. Bull, J.A. Cardoso, P. Carter, D. Delahay, R.M. Ducommun, B. Duijf, P.H.G. Epp, T. Eskelinen, E.-L. Fallah, M. Farber, D.B. Fernandez-Triana, J. Feyerabend, F. Florio, T. Friebe, M. Furuta, S. Gabrielsen, M. Gruber, J. Grybos, M. Han, Q. Heinrich, M. Helanterä, H. Huber, M. Jeltsch, A. Jiang, F. Josse, C. Jurman, G. Kamiya, H. de Keersmaecker, K. Kristiansson, E. de Leeuw, F.-E. Li, J. Liang, S. Lopez-Escamez, J.A. Lopez-Ruiz, F.J. Marchbank, K.J. Marschalek, R. Martín, C.S. Miele, A.E. Montagutelli, X. Morcillo, E. Nicoletti, R. Niehof, M. O'Toole, R. Ohtomo, T. Oster, H. Palma, J.-A. Paterson, R. Peifer, M. Portilla, M. Portillo, M.C. Pritchard, A.L. Pusch, S. Raghava, G.P.S. Roberts, N.J. Ross, K. Schuele, B. Sergeant, K. Shen, J. Stella, A. Sukocheva, O. Uversky, V.N. Vanneste, S. Villet, M.H. Viveiros, M. Vorholt, J.A. Weinstock, C. Yamato, M. Zabetakis, I. Zhao, X. Ziegler, A. Aizat, W.M. Atlas, L. Bridges, K.M. Chakraborty, S. Deschodt, M. Domingues, H.S. Esfahlani, S.S. Falk, S. Guisado, J.L. Kane, N.C. Kueberuwa, G. Lau, C.L. Liang, D. Liu, E. Luu, A.M. Ma, C. Ma, L. Moyer, R. Norris, A.D. Panthee, S. Parsons, J.R. Peng, Y. Pinto, I.M. Reschke, C.R. Sillanpää, E. Stewart, C.J. Uhle, F. Yang, H. Zhou, K. Zhu, S. Ashry, M. Bergsland, N. Berthold, M. Chen, C.-E. Colella, V. Cuypers, M. Eskew, E.A. Fan, X. Gajda, M. Gonzálezlez-Prendes, R. Goodin, A. Graham, E.B. Groen, E.J.N. Gutiérrez-Sacristán, A. Habes, M. Heffler, E. Higginbottom, D.B. Janzen, T. Jayaraman, J. Jibb, L.A. Jongen, S. Kinyanjui, T. Koleva-Kolarova, R.G. Li, Z. Liu, Y.-P. Lund, B.A. Lussier, A.A. Ma, L. Mier, P. Moore, M.D. Nagler, K. Orme, M.W. Pearson, J.A. Prajapati, A.S. Saito, Y. Tröder, S.E. Uchendu, F. Verloh, N. Voutchkova, D.D. Abu-Zaid, A. Bakkach, J. Baumert, P. Dono, M. Hanson, J. Herbelet, S. Hobbs, E. Kulkarni, A. Kumar, N. Liu, S. Loft, N.D. Reddan, T. Senghore, T. Vindin, H. Xu, H. Bannon, R. Chen, B. Cheung, J.T.K. Cooper, J. Esnakula, A.K. Feghali, K.A. Ghelardi, E. Gnasso, A. Horbar, J. Lai, H.M. Li, J. Ma, L. Ma, R. Pan, Z. Peres, M.A. Pranata, R. Seow, E. Sydes, M. Testoni, I. Westermair, A.L. Yang, Y. Afnan, M. Albiol, J. Albuquerque, L.G. Amir, S. Amiya, E. Amorim, R.M. An, Q. Andersen, S.U. Aplin, J.D. Argyropoulos, C. Asmann, Y.W. Assaeed, A.M. Atanasov, A.G. Atchison, D.A. Avery, S.V. Avillach, P. Baade, P.D. Backman, L. Badie, C. Baldi, A. Ball, E. Bardot, O. Barnett, A.G. Basner, M. Batra, J. Bazanova, O.M. Beale, A. Beddoe, T. Bell, M.L. Berezikov, E. Berners-Price, S. Bernhardt, P. Berry, E. Bessa, T.B. Billington, C. Birch, J. Blakely, R.D. Blaskovich, M.A.T. Blum, R. Boelaert, M. Bogdanos, D. Bosch, C. Bourgoin, T. Bouvard, D. Boykin, L.M. Bradley, G. Braun, D. 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Zaritsky, A. Zhang, Y. Zhao, H. Zuckerman, H. Lyu, R. Pullan, W. RELISH Consortium
- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science. © The Author(s) 2019. Published by Oxford University Press.
- Published
- 2019
43. Radiation yield of stable radiolysis products of 1-chlorobutane, 1-chlorobutene-2, 1-chloropropane, 2-chloropropane and 1,3-dichloropropane γ-irradiated in an oxygen-free atmosphere
- Author
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Szymanski, W., Truszkowski, S., Smietanska, G., and Kowal, M.
- Published
- 1993
- Full Text
- View/download PDF
44. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
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M., Hackshaw, A., Hall, A., Hall, R., Harper, P., Hogg, W. E., Huang, G., Hunter, K. E., Ijzerman, A. P., Jesus, C., Jian, G., Lewis, J. S., Kanj, S. S., Kaur, H., Kheir, F., Kichatova, V. S., Kiyani, M., Klein, R., Kovesi, T., Kraschnewski, J. L., Kumar, A. P., Labutin, D., Lazo-Langner, A., Leclercq, G., Li, M., Li, Q., Li, T., Liao, W. -T., Liao, Z. -Y., Lin, J., Lizer, J., Lobreglio, G., Lowies, C., Lu, C., Majeed, H., Martin, A., Martinez-Sobrido, L., Meresh, E., Middelveen, M., Mohebbi, A., Mota, J., Mozaheb, Z., Muyaya, L., Nandhakumar, A., Ng, S. H. X., Obeidat, M., Oh, D. -H., Owais, M., Pace-Asciak, P., Panwar, A., Patterson, C., Penagos-Tabaree, F., Pianosi, P. T., Pinzi, V., Pridans, C., Psaroulaki, A., Pujala, R. K., Pulido-Arjona, L., Qi, P. -F., Rahman, P., Rai, N. K., Rassaf, T., Refardt, J., Ricciardi, Walter, Riess, O., Rovas, A., Sacks, F. M., Saleh, S., Sampson, C., Schmutz, A., Sepanski, R., Sharma, N., Spearman, P., Subramaniapillai, M., Swali, R., Tan, C. 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- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science.
- Published
- 2019
45. Measurement standard for determination of aerosol number concentration
- Author
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Filipovicova, D., primary, Reischl, G.P., additional, Rudolf, R., additional, W. Szymanski, W., additional, Vrtala, A., additional, and E. Wagner, P., additional
- Published
- 1996
- Full Text
- View/download PDF
46. Tavipec® in acute rhinosinusitis: a multi-centre, doubleblind, randomized, placebo-controlled, clinical trial
- Author
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Dejaco, D., primary, Bocian-Sobkowska, J., additional, Szymanski, W., additional, Zacke, G., additional, Hockner, V., additional, and Riechelmann, H., additional
- Published
- 2019
- Full Text
- View/download PDF
47. A light-responsive liposomal agent for MRI contrast enhancement and monitoring of cargo delivery
- Author
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Reeßing, F., primary, Stuart, M. C. A., additional, Samplonius, D. F., additional, Dierckx, R. A. J. O., additional, Feringa, B. L., additional, Helfrich, W., additional, and Szymanski, W., additional
- Published
- 2019
- Full Text
- View/download PDF
48. Controlling the activity of quorum sensing autoinducers with light† †Electronic supplementary information (ESI) available: Detailed experimental information on chemical synthesis, photoswitching experiments, bacterial growth conditions, bioluminescence assay, RNA isolation and cDNA synthesis, gene expression and pyocyanine assay details. See DOI: 10.1039/c5sc00215j
- Author
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Van der Berg, J. P., Velema, W. A., Szymanski, W., Driessen, A. J. M., and Feringa, B. L.
- Subjects
Chemistry - Abstract
Bacteria use Quorum Sensing (QS) to organize into communities and synchronize gene expression. Here we report on a method to externally interfere with QS system using light., Bacteria use a communication system, called quorum sensing (QS), to organize into communities and synchronize gene expression to promote virulence and secure survival. Here we report on a proof-of-principle for externally interfering with this bacterial communication system, using light. By employing photoswitchable small molecules, we were able to photocontrol the QS-related bioluminescence in an Escherichia coli reporter strain, and the expression of target QS genes and pyocyanin production in Pseudomonas aeruginosa.
- Published
- 2015
49. SATURATED ACTIONS OF FINITE DIMENSIONAL HOPF *-ALGEBRAS ON C*-ALGEBRAS
- Author
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SZYMAŃSKI, W. and PELIGRAD, C.
- Published
- 1994
50. Order Structure and Lebesgue Decomposition of Positive Definite Operator Functions
- Author
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ANDO, T. and SZYMAŃSKI, W.
- Published
- 1986
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