25 results on '"Syeda, W"'
Search Results
2. Fabrication, microstructure and mechanical properties of in situ formed particle reinforced titanium matrix composite
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Hayat, Muhammad D., Singh, Harshpreet, Miodowski, Arthur, Bokhari, Syeda W., He, Zhen, and Cao, Peng
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- 2020
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3. Synthesis, Urease Inhibition and Molecular Modelling Studies of Novel Derivatives of the Naturally Occurring β-Amyrenone
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Bankeu, Jean J. K., Sattar, Hira, Fongang, Yannick S. F., Muhammadi, Syeda W., Simoben, Conrad V., Ntie-Kang, Fidele, Feuya, Guy R. T., Tchuenmogne, Marthe A. T., Lateef, Mehreen, Lenta, Bruno N., Ali, Muhammad S., and Ngouela, Augustin S.
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- 2019
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4. Trends in Mortality Due to Stimulants Use in Adolescents and Young Adults
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Surbhi Tyagi, Tasneem Kousar, David Leszkowitz, Rabeet Tariq, Rafael Abreu, Adam M. Qazi, Syeda W. Salari, Namrata Walia, Jessica O. Lat, Mahvish Renzu, Amina Jafar, and Ivan Rodriguez
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business.industry ,Medicine ,General Medicine ,Young adult ,business ,Demography - Published
- 2021
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5. Investigation of Brain Iron in Niemann-Pick Type C: A 7T Quantitative Susceptibility Mapping Study.
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Ravanfar, P., Syeda, W. T., Rushmore, R. J., Moffat, B., Lyall, A. E., Merritt, A. H., Devenyi, G. A., Chakravarty, M. M., Desmond, P., Cropley, V. L., Makris, N., Shenton, M. E., Bush, A. I., Velakoulis, D., Pantelis, C., and Walterfang, M.
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- 2023
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6. Long-term structural brain changes in adult rats after mild ischaemic stroke
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Syeda, W, Ermine, CM, Khilf, MS, Wright, D, Brait, VH, Nithianantharajah, J, Kolbe, S, Johnston, LA, Thompson, LH, Brodtmann, A, Syeda, W, Ermine, CM, Khilf, MS, Wright, D, Brait, VH, Nithianantharajah, J, Kolbe, S, Johnston, LA, Thompson, LH, and Brodtmann, A
- Abstract
Preclinical studies of remote degeneration have largely focused on brain changes over the first few days or weeks after stroke. Accumulating evidence suggests that neurodegeneration occurs in other brain regions remote to the site of infarction for months and even years following ischaemic stroke. Brain atrophy appears to be driven by both axonal degeneration and widespread brain inflammation. The evolution and duration of these changes are increasingly being described in human studies, using advanced brain imaging techniques. Here, we sought to investigate long-term structural brain changes in a model of mild focal ischaemic stroke following injection of endothlin-1 in adult Long-Evans rats (n = 14) compared with sham animals (n = 10), over a clinically relevant time-frame of 48 weeks. Serial structural and diffusion-weighted MRI data were used to assess dynamic volume and white matter trajectories. We observed dynamic regional brain volume changes over the 48 weeks, reflecting both normal changes with age in sham animals and neurodegeneration in regions connected to the infarct following ischaemia. Ipsilesional cortical volume loss peaked at 24 weeks but was less prominent at 36 and 48 weeks. We found significantly reduced fractional anisotropy in both ipsi- and contralesional motor cortex and cingulum bundle regions of infarcted rats (P < 0.05) from 4 to 36 weeks, suggesting ongoing white matter degeneration in tracts connected to but distant from the stroke. We conclude that there is evidence of significant cortical atrophy and white matter degeneration up to 48 weeks following infarct, consistent with enduring, pervasive stroke-related degeneration.
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- 2022
7. Membrane protein extraction and purification using partially-esterified SMA polymers
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Madiha Khan, Arcella Lim, Christine Parisa T. Jahromi, Mohammad Z. Tariq, Ashley Guest, Stephanie A Nestorow, Luke Cavanagh, Aleksandr Jestin, Aneel Akram, Olivia P. Hawkins, Lora Evans, Naadiya Mohiddin, Hannah Healy, Taranpreet Bahra, Asma Ahmed, Christopher Williams, Biser Asparuhov, Rumandeep K. Thandi, Timothy R. Dafforn, Alice Rothnie, Kara Byrnes, Hannah O'rourke, Nila N. Nahar, Roslyn M. Bill, Cassandra Harris, Christian Shelton, Simran Kang, Alan D. Goddard, Mariam Ajmal, Farah Rasool, Syeda W. Hasan, Afroditi Vaitsopoulou, Aswathy Joby, John Simms, Johanna Binding, Aiman A. Gulamhussein, and Quincy K. Owusu-mensah
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Maleic acid ,Protein Conformation ,Lipid Bilayers ,Biophysics ,Cyanobacteria ,Biochemistry ,Thylakoids ,Article ,Divalent ,chemistry.chemical_compound ,Nanoparticle ,Cations ,Lipid bilayer ,Solubilisation ,Magnesium ion ,chemistry.chemical_classification ,SMALP ,Esterification ,Maleates ,Membrane Proteins ,Cell Biology ,Polymer ,SMA ,Lipids ,chemistry ,Membrane protein ,Thylakoid ,Polystyrenes - Abstract
Styrene maleic acid (SMA) polymers have proven to be very successful for the extraction of membrane proteins, forming SMA lipid particles (SMALPs), which maintain a lipid bilayer around the membrane protein. SMALP-encapsulated membrane proteins can be used for functional and structural studies. The SMALP approach allows retention of important protein-annular lipid interactions, exerts lateral pressure, and offers greater stability than traditional detergent solubilisation. However, SMA polymer does have some limitations, including a sensitivity to divalent cations and low pH, an absorbance spectrum that overlaps with many proteins, and possible restrictions on protein conformational change. Various modified polymers have been developed to try to overcome these challenges, but no clear solution has been found. A series of partially-esterified variants of SMA (SMA 2625, SMA 1440 and SMA 17352) has previously been shown to be highly effective for solubilisation of plant and cyanobacterial thylakoid membranes. It was hypothesised that the partial esterification of maleic acid groups would increase tolerance to divalent cations. Therefore, these partially-esterified polymers were tested for the solubilisation of lipids and membrane proteins, and their tolerance to magnesium ions. It was found that all partially esterified polymers were capable of solubilising and purifying a range of membrane proteins, but the yield of protein was lower with SMA 1440, and the degree of purity was lower for both SMA 1440 and SMA 17352. SMA 2625 performed comparably to SMA 2000. SMA 1440 also showed an increased sensitivity to divalent cations. Thus, it appears the interactions between SMA and divalent cations are more complex than proposed and require further investigation., Graphical abstract Unlabelled Image, Highlights • Partially-esterified SMA polymers are effective for solubilisation of membrane proteins from different expression systems. • Proteins in partially-esterified SMALPs can be purified by Ni2+ affinity chromatography, but yield is lower with SMA 1440. • Partial esterification of SMA does not overcome the sensitivity to divalent cations. • SMA1440 is more sensitive to magnesium ions than SMA 2000.
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- 2021
8. Trends in Mortality Due to Stimulants Use in Adolescents and Young Adults
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Walia, Namrata, primary, Lat, Jessica O., additional, Tariq, Rabeet, additional, Tyagi, Surbhi, additional, Qazi, Adam M., additional, Salari, Syeda W., additional, Jafar, Amina, additional, Kousar, Tasneem, additional, Renzu, Mahvish, additional, Leszkowitz, David, additional, Abreu, Rafael, additional, and Rodriguez, Ivan, additional
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- 2021
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9. Changes in negative symptoms are linked to white matter changes in superior longitudinal fasciculus in individuals at ultra-high risk for psychosis
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Kristensen, TD, Glenthoj, LB, Ragahava, JM, Syeda, W, Mandl, RCW, Wenneberg, C, Krakauer, K, Fagerlund, B, Pantelis, C, Glenthoj, BY, Nordentoft, M, Ebdrup, BH, Kristensen, TD, Glenthoj, LB, Ragahava, JM, Syeda, W, Mandl, RCW, Wenneberg, C, Krakauer, K, Fagerlund, B, Pantelis, C, Glenthoj, BY, Nordentoft, M, and Ebdrup, BH
- Abstract
AIM: Growing evidence suggests that subtle white matter (WM) alterations are associated with psychopathology in individuals at ultra-high risk for psychosis (UHR). However, the longitudinal relationship between symptom progression and WM changes over time remains under-explored. Here, we examine associations between changes in clinical symptoms and changes in WM over six months in a large UHR-cohort. METHODS: 110 UHR-individuals and 59 healthy controls underwent diffusion weighted imaging at baseline and after six months. Group × time effects on fractional anisotropy (FA) were tested globally and in four predefined regions of interest (ROIs) bilaterally using linear modelling with repeated measures. Correlations between the changes in clinical symptoms and FA changes in the ROIs were examined with Pearson's correlation. A partial least squares correlation-technique (PLS-C) explored multivariate associations between patterns of changes in psychopathology, regional FA and additional WM indices. RESULTS: At baseline, UHR-individuals displayed significantly lower FA globally (p = 0.018; F = 12.274), in right superior longitudinal fasciculus (p = 0.02; Adj R2 = 0.07) and in left uncinate fasciculus (p = 0.048; Adj R2 = 0.058) compared to controls (corrected). We identified a group × time interaction in global FA and right superior longitudinal fasciculus, but the finding did not survive multiple comparisons. However, an increase of negative symptoms in UHR-individuals correlated with FA increase in right superior longitudinal fasciculus (p = 0.048, corrected, r = 0.357), and this finding was supported by the multivariate PLS-C. CONCLUSION: We found a positive correlation with a moderate effect between change in negative symptoms and FA change over 6 months in right superior longitudinal fasciculus. This link appeared mainly to reflect a subgroup of UHR-individuals, which already at baseline presented as vulnerable.
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- 2021
10. Microstructural correlates of 23Na relaxation in human brain at 7 Tesla.
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Kolbe, SC, Syeda, W, Blunck, Y, Glarin, R, Law, M, Johnston, LA, Cleary, JO, Kolbe, SC, Syeda, W, Blunck, Y, Glarin, R, Law, M, Johnston, LA, and Cleary, JO
- Abstract
23Na provides the second strongest MR-observable signal in biological tissue and exhibits bi-exponential T2∗ relaxation in micro-environments such as the brain. There is significant interest in developing 23Na biomarkers for neurological diseases that are associated with sodium channel dysfunction such as multiple sclerosis and epilepsy. We have previously reported methods for acquisition of multi-echo sodium MRI and continuous distribution modelling of sodium relaxation properties as surrogate markers of brain microstructure. This study aimed to compare 23Na T2∗ relaxation times to more established measures of tissue microstructure derived from advanced diffusion MRI at 7 T. Six healthy volunteers were scanned using a 3D multi-echo radial ultra-short TE sequence using a dual-tuned 1H/23Na birdcage coil, and a high-resolution multi-shell, high angular resolution diffusion imaging sequence using a 32-channel 1H receive coil. 23Na T2∗ relaxation parameters [mean T2∗ (T2∗mean) and fast relaxation fraction (T2∗ff)] were calculated from a voxel-wise continuous gamma distribution signal model. White matter (restricted anisotropic diffusion) and grey matter (restricted isotropic diffusion) density were calculated from multi-shell multi-tissue constrained spherical deconvolution. Sodium parameters were compared with white and grey matter diffusion properties. Sodium T2∗mean and T2∗ff showed little variation across a range of white matter axonal fibre and grey matter densities. We conclude that sodium T2∗ relaxation parameters are not greatly influenced by relative differences in intra- and extracellular partial volumes. We suggest that care be taken when interpreting sodium relaxation changes in terms of tissue microstructure in healthy tissue.
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- 2020
11. Synthesis, Urease Inhibition and Molecular Modelling Studies of Novel Derivatives of the Naturally Occurring β-Amyrenone
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Bruno Ndjakou Lenta, Mehreen Lateef, Hira Sattar, Augustin S. Ngouela, Guy Raymond Tchouya Feuya, Marthe Aimée Tchuente Tchuenmogne, Syeda W. Muhammadi, Yannick S. F. Fongang, Muhammad Ali, Fidele Ntie-Kang, Jean Jules Kezetas Bankeu, and Conrad V. Simoben
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Urease ,Stereochemistry ,Olean-12-en-3-one derivatives ,Plant Science ,Toxicology ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Docking ,chemistry.chemical_compound ,lcsh:Botany ,Bioorganic chemistry ,Moiety ,Carcinogen ,Pharmacology ,Indole test ,biology ,Helicobacter pylori ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Moraceae ,biology.organism_classification ,0104 chemical sciences ,lcsh:QK1-989 ,010404 medicinal & biomolecular chemistry ,Thiourea ,Docking (molecular) ,biology.protein ,Original Article ,Urease inhibition ,Food Science - Abstract
Urease enzyme (UE) has been reported to be a potent virulence factor for Helicobacter pylori (HP) bacteria indicated to be responsible for various gastrointestinal diseases. Therefore, the spread of HP, currently regarded by the World Health Organization as a class 1 carcinogen, could be better controlled by targeting UE. It is in this line that we have synthesized three new derivatives (2–4) of the naturally occurring olean-12-en-3-one (1), which was previously isolated from the figs of Ficus vallis-choudae Delile (Moraceae). Among the synthesized compounds, 3 and 4 contain an indole moiety. Their structures were unambiguously assigned by spectroscopic and spectrometric techniques (1D-NMR, 2D-NMR and MS). The starting material and the synthesized compounds were screened for UE inhibition activity, and showed significant activities with IC50 values ranging from 14.5 to 24.6 μM, with compound (1) being the most potent as compared to the positive control thiourea (IC50 = 21.6 μM). Amongst the synthetic derivatives, compound 4 was the most potent (IC50 = 17.9 μM), while the others showed activities close to that of the control. In addition, molecular docking study of target compounds 2–4 was performed in an attempt to explore their binding mode for the design of more potent UE inhibitors. Graphical Abstract Electronic supplementary material The online version of this article (10.1007/s13659-018-0193-7) contains supplementary material, which is available to authorized users.
- Published
- 2018
12. 5.52 ELEMENTS OF PSYCHOSOCIAL INTERVENTIONS FOR COMMON PERINATAL MENTAL HEALTH PROBLEMS AMONG WOMEN TO IMPROVE EARLY CHILDHOOD DEVELOPMENT IN LOW- AND MIDDLE-INCOME COUNTRIES
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Waqas, Ahmed, primary, Rahman, Atif, additional, Zafar, Syeda W., additional, Suleman, Nadia, additional, Usman Hamdani, Syed, additional, and Fisher, Jane, additional
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- 2019
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13. A continuum of T2* components: Flexible fast fraction mapping in sodium MRI
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Syeda, W, Blunck, Y, Kolbe, S, Cleary, JO, Johnston, LA, Syeda, W, Blunck, Y, Kolbe, S, Cleary, JO, and Johnston, LA
- Abstract
PURPOSE: Parameter mapping in sodium MRI data is challenging due to inherently low SNR and spatial resolution, prompting the need to employ robust models and estimation techniques. This work aims to develop a continuum model of sodium T2* -decay to overcome the limitations of the commonly employed bi-exponential models. Estimates of mean T2* -decay and fast component fraction in tissue are emergent from the inferred continuum model. METHODS: A closed-form continuum model was derived assuming a gamma distribution of T2* components. Sodium MRI was performed on four healthy human subjects and a phantom consisting of closely packed vials filled with an aqueous solution of varying sodium and agarose concentrations. The continuum model was applied to the phantom and in vivo human multi-echo 7T data. Parameter maps by voxelwise model-fitting were obtained. RESULTS: The continuum model demonstrated comparable estimation performance to the bi-exponential model. The parameter maps provided improved contrast between tissue structures. The fast component fraction, an indicator of the heterogeneity of localised sodium motion regimes in tissue, was zero in CSF and high in WM structures. CONCLUSIONS: The continuum distribution model provides high quality, high contrast parameter maps, and informative voxelwise estimates of the relative weighting between fast and slow decay components.
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- 2019
14. Design And Implementation Of Dual Band Microstrip Patch Antenna For Wlan Energy Harvesting System
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Amjad, Osama, Munir, Syeda W., Imeci, Sehabeddin T., and Ercan, Ali O.
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Hardware_GENERAL ,Hardware_INTEGRATEDCIRCUITS - Abstract
Since the demand for self-sustained wireless systems is increasing, there is a trend towards RF energy harvesting. It is a key solution to energize the low power systems such as the Internet of Things (IoT) devices without replacing the batteries periodically. This paper presents the design and analysis of RF energy harvesting system that consists of dual-band microstrip patch antenna operating at 2.4 GHz and 5.8 GHz, an impedance matching network, 4-stage voltage doubler and a storing circuit. The antenna is designed using ADS Agilent and sonnet suites software that provides a directivity of 5.5 dBi and 6.3 dBi at 2.4 GHz and 5.8 GHz respectively. The measured results of the fabricated antenna are well agreement with the simulated results. Simulated results show that for an input received power of 10 mW, the proposed system can provide 4.5 mW power at the output of 4-stage voltage rectifier with an overall efficiency of 45%.
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- 2018
15. Synthesis, Urease Inhibition and Molecular Modelling Studies of Novel Derivatives of the Naturally Occurring β-Amyrenone
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Bankeu, Jean J. K., primary, Sattar, Hira, additional, Fongang, Yannick S. F., additional, Muhammadi, Syeda W., additional, Simoben, Conrad V., additional, Ntie-Kang, Fidele, additional, Feuya, Guy R. T., additional, Tchuenmogne, Marthe A. T., additional, Lateef, Mehreen, additional, Lenta, Bruno N., additional, Ali, Muhammad S., additional, and Ngouela, Augustin S., additional
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- 2018
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16. White matter alterations associated with chronic cannabis use disorder: a structural network and fixel-based analysis.
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Maleki S, Hendrikse J, Richardson K, Segrave RA, Hughes S, Kayayan E, Oldham S, Syeda W, Coxon JP, Caeyenberghs K, Domínguez D JF, Solowij N, Lubman DI, Suo C, and Yücel M
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- Humans, Male, Adult, Female, Young Adult, Brain diagnostic imaging, Brain pathology, Case-Control Studies, White Matter diagnostic imaging, White Matter pathology, Marijuana Abuse pathology, Marijuana Abuse diagnostic imaging, Magnetic Resonance Imaging, Connectome
- Abstract
Cannabis use disorder (CUD) is associated with adverse mental health effects, as well as social and cognitive impairment. Given prevalence rates of CUD are increasing, there is considerable efforts, and need, to identify prognostic markers which may aid in minimising any harm associated with this condition. Previous neuroimaging studies have revealed changes in white matter (WM) organization in people with CUD, though, the findings are mixed. In this study, we applied MRI-based analysis techniques that offer complimentary mechanistic insights, i.e., a connectome approach and fixel-based analysis (FBA) to investigate properties of individual WM fibre populations and their microstructure across the entire brain, providing a highly sensitive approach to detect subtle changes and overcome limitations of previous diffusion models. We compared 56 individuals with CUD (median age 25 years) to a sample of 38 healthy individuals (median age 31.5 years). Compared to controls, those with CUD had significantly increased structural connectivity strength (FDR corrected) across 9 edges between the right parietal cortex and several cortical and subcortical regions, including left orbitofrontal, left temporal pole, and left hippocampus and putamen. Utilizing FBA, WM density was significantly higher in those with CUD (FWE-corrected) across the splenium of the corpus callosum, and lower in the bilateral cingulum and right cerebellum. We observed significant correlation between cannabis use over the past month and connectivity strength of the frontoparietal edge, and between age of regular use and WM density of the bilateral cingulum and right cerebellum. Our findings enhance the understanding of WM architecture alterations associated with CUD., (© 2024. The Author(s).)
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- 2024
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17. Fibre density and fibre-bundle cross-section of the corticospinal tract are distinctly linked to psychosis-specific symptoms in antipsychotic-naïve patients with first-episode schizophrenia.
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Kristensen TD, Raghava JM, Skjerbæk MW, Dhollander T, Syeda W, Ambrosen KS, Bojesen KB, Nielsen MØ, Pantelis C, Glenthøj BY, and Ebdrup BH
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- Humans, Pyramidal Tracts diagnostic imaging, Pyramidal Tracts pathology, Diffusion Magnetic Resonance Imaging methods, Brain pathology, Schizophrenia drug therapy, Antipsychotic Agents pharmacology, Antipsychotic Agents therapeutic use, White Matter diagnostic imaging, White Matter pathology, Psychotic Disorders drug therapy
- Abstract
Multiple lines of research support the dysconnectivity hypothesis of schizophrenia. However, findings on white matter (WM) alterations in patients with schizophrenia are widespread and non-specific. Confounding factors from magnetic resonance image (MRI) processing, clinical diversity, antipsychotic exposure, and substance use may underlie some of the variability. By application of refined methodology and careful sampling, we rectified common confounders investigating WM and symptom correlates in a sample of strictly antipsychotic-naïve first-episode patients with schizophrenia. Eighty-six patients and 112 matched controls underwent diffusion MRI. Using fixel-based analysis (FBA), we extracted fibre-specific measures such as fibre density and fibre-bundle cross-section. Group differences on fixel-wise measures were examined with multivariate general linear modelling. Psychopathology was assessed with the Positive and Negative Syndrome Scale. We separately tested multivariate correlations between fixel-wise measures and predefined psychosis-specific versus anxio-depressive symptoms. Results were corrected for multiple comparisons. Patients displayed reduced fibre density in the body of corpus callosum and in the middle cerebellar peduncle. Fibre density and fibre-bundle cross-section of the corticospinal tract were positively correlated with suspiciousness/persecution, and negatively correlated with delusions. Fibre-bundle cross-section of isthmus of corpus callosum and hallucinatory behaviour were negatively correlated. Fibre density and fibre-bundle cross-section of genu and splenium of corpus callosum were negative correlated with anxio-depressive symptoms. FBA revealed fibre-specific properties of WM abnormalities in patients and differentiated associations between WM and psychosis-specific versus anxio-depressive symptoms. Our findings encourage an itemised approach to investigate the relationship between WM microstructure and clinical symptoms in patients with schizophrenia., (© 2023. The Author(s).)
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- 2023
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18. Investigation of Brain Iron in Niemann-Pick Type C: A 7T Quantitative Susceptibility Mapping Study.
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Ravanfar P, Syeda WT, Rushmore RJ, Moffat B, Lyall AE, Merritt AH, Devenyi GA, Chakravarty MM, Desmond P, Cropley VL, Makris N, Shenton ME, Bush AI, Velakoulis D, Pantelis C, and Walterfang M
- Subjects
- Humans, Brain diagnostic imaging, Thalamus, Cognition, Magnetic Resonance Imaging methods, Brain Mapping, Iron, Niemann-Pick Disease, Type C
- Abstract
Background and Purpose: While brain iron dysregulation has been observed in several neurodegenerative disorders, its association with the progressive neurodegeneration in Niemann-Pick type C is unknown. Systemic iron abnormalities have been reported in patients with Niemann-Pick type C and in animal models of Niemann-Pick type C. In this study, we examined brain iron using quantitative susceptibility mapping MR imaging in individuals with Niemann-Pick type C compared with healthy controls., Materials and Methods: A cohort of 10 patients with adolescent- and adult-onset Niemann-Pick type C and 14 age- and sex-matched healthy controls underwent 7T brain MR imaging with T1 and quantitative susceptibility mapping acquisitions. A probing whole-brain voxelwise comparison of quantitative susceptibility mapping between groups was conducted. Mean quantitative susceptibility mapping in the ROIs (thalamus, hippocampus, putamen, caudate nucleus, and globus pallidus) was further compared. The correlations between regional volume, quantitative susceptibility mapping values, and clinical features, which included disease severity on the Iturriaga scale, cognitive function, and the Social and Occupational Functioning Assessment Scale, were explored as secondary analyses., Results: We observed lower volume in the thalamus and voxel clusters of higher quantitative susceptibility mapping in the pulvinar nuclei bilaterally in patients with Niemann-Pick type C compared with the control group. In patients with Niemann-Pick type C, higher quantitative susceptibility mapping in the pulvinar nucleus clusters correlated with lower volume of the thalamus on both sides. Moreover, higher quantitative susceptibility mapping in the right pulvinar cluster was associated with greater disease severity., Conclusions: Our findings suggest iron deposition in the pulvinar nucleus in Niemann-Pick type C disease, which is associated with thalamic atrophy and disease severity. This preliminary evidence supports the link between iron and neurodegeneration in Niemann-Pick type C, in line with existing literature on other neurodegenerative disorders., (© 2023 by American Journal of Neuroradiology.)
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- 2023
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19. Long-term structural brain changes in adult rats after mild ischaemic stroke.
- Author
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Syeda W, Ermine CM, Khilf MS, Wright D, Brait VH, Nithianantharajah J, Kolbe S, Johnston LA, Thompson LH, and Brodtmann A
- Abstract
Preclinical studies of remote degeneration have largely focused on brain changes over the first few days or weeks after stroke. Accumulating evidence suggests that neurodegeneration occurs in other brain regions remote to the site of infarction for months and even years following ischaemic stroke. Brain atrophy appears to be driven by both axonal degeneration and widespread brain inflammation. The evolution and duration of these changes are increasingly being described in human studies, using advanced brain imaging techniques. Here, we sought to investigate long-term structural brain changes in a model of mild focal ischaemic stroke following injection of endothlin-1 in adult Long-Evans rats ( n = 14) compared with sham animals ( n = 10), over a clinically relevant time-frame of 48 weeks. Serial structural and diffusion-weighted MRI data were used to assess dynamic volume and white matter trajectories. We observed dynamic regional brain volume changes over the 48 weeks, reflecting both normal changes with age in sham animals and neurodegeneration in regions connected to the infarct following ischaemia. Ipsilesional cortical volume loss peaked at 24 weeks but was less prominent at 36 and 48 weeks. We found significantly reduced fractional anisotropy in both ipsi- and contralesional motor cortex and cingulum bundle regions of infarcted rats ( P < 0.05) from 4 to 36 weeks, suggesting ongoing white matter degeneration in tracts connected to but distant from the stroke. We conclude that there is evidence of significant cortical atrophy and white matter degeneration up to 48 weeks following infarct, consistent with enduring, pervasive stroke-related degeneration., (© The Author(s) 2022. Published by Oxford University Press on behalf of the Guarantors of Brain.)
- Published
- 2022
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20. Corrigendum to: Prediction of Early Symptom Remission in Two Independent Samples of First-Episode Psychosis Patients Using Machine Learning.
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Soldatos RF, Cearns M, Nielsen MØ, Kollias C, Xenaki LA, Stefanatou P, Ralli I, Dimitrakopoulos S, Hatzimanolis A, Kosteletos I, Vlachos II, Selakovic M, Foteli S, Nianiakas N, Mantonakis L, Triantafyllou TF, Ntigridaki A, Ermiliou V, Voulgaraki M, Psarra E, Sørensen ME, Bojesen KB, Tangmose K, Sigvard AM, Ambrosen KS, Meritt T, Syeda W, Glenthøj BY, Koutsouleris N, Pantelis C, Ebdrup BH, and Stefanis N
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- 2022
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21. Prediction of Early Symptom Remission in Two Independent Samples of First-Episode Psychosis Patients Using Machine Learning.
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Soldatos RF, Cearns M, Nielsen MØ, Kollias C, Xenaki LA, Stefanatou P, Ralli I, Dimitrakopoulos S, Hatzimanolis A, Kosteletos I, Vlachos II, Selakovic M, Foteli S, Nianiakas N, Mantonakis L, Triantafyllou TF, Ntigridaki A, Ermiliou V, Voulgaraki M, Psarra E, Sørensen ME, Bojesen KB, Tangmose K, Sigvard AM, Ambrosen KS, Meritt T, Syeda W, Glenthøj BY, Koutsouleris N, Pantelis C, Ebdrup BH, and Stefanis N
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- Adolescent, Adult, Cohort Studies, Female, Humans, Male, Models, Statistical, Prognosis, Remission Induction, Remission, Spontaneous, Young Adult, Outcome Assessment, Health Care methods, Psychotic Disorders diagnosis, Psychotic Disorders physiopathology, Psychotic Disorders therapy, Schizophrenia diagnosis, Schizophrenia physiopathology, Schizophrenia therapy, Support Vector Machine
- Abstract
Background: Validated clinical prediction models of short-term remission in psychosis are lacking. Our aim was to develop a clinical prediction model aimed at predicting 4-6-week remission following a first episode of psychosis., Method: Baseline clinical data from the Athens First Episode Research Study was used to develop a Support Vector Machine prediction model of 4-week symptom remission in first-episode psychosis patients using repeated nested cross-validation. This model was further tested to predict 6-week remission in a sample of two independent, consecutive Danish first-episode cohorts., Results: Of the 179 participants in Athens, 120 were male with an average age of 25.8 years and average duration of untreated psychosis of 32.8 weeks. 62.9% were antipsychotic-naïve. Fifty-seven percent attained remission after 4 weeks. In the Danish cohort, 31% attained remission. Eleven clinical scale items were selected in the Athens 4-week remission cohort. These included the Duration of Untreated Psychosis, Personal and Social Performance Scale, Global Assessment of Functioning and eight items from the Positive and Negative Syndrome Scale. This model significantly predicted 4-week remission status (area under the receiver operator characteristic curve (ROC-AUC) = 71.45, P < .0001). It also predicted 6-week remission status in the Danish cohort (ROC-AUC = 67.74, P < .0001), demonstrating reliability., Conclusions: Using items from common and validated clinical scales, our model significantly predicted early remission in patients with first-episode psychosis. Although replicated in an independent cohort, forward testing between machine learning models and clinicians' assessment should be undertaken to evaluate the possible utility as a routine clinical tool., (© The Author(s) 2021. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center.All rights reserved. For permissions, please email: journals.permissions@oup.com.)
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- 2022
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22. Global fractional anisotropy predicts transition to psychosis after 12 months in individuals at ultra-high risk for psychosis.
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Kristensen TD, Glenthøj LB, Ambrosen K, Syeda W, Raghava JM, Krakauer K, Wenneberg C, Fagerlund B, Pantelis C, Glenthøj BY, Nordentoft M, and Ebdrup BH
- Subjects
- Anisotropy, Diffusion Magnetic Resonance Imaging, Humans, Psychiatric Status Rating Scales, Reproducibility of Results, Risk Factors, Psychotic Disorders diagnostic imaging, White Matter diagnostic imaging
- Abstract
Objective: Psychosis spectrum disorders are associated with cerebral changes, but the prognostic value and clinical utility of these findings are unclear. Here, we applied a multivariate statistical model to examine the predictive accuracy of global white matter fractional anisotropy (FA) for transition to psychosis in individuals at ultra-high risk for psychosis (UHR)., Methods: 110 UHR individuals underwent 3 Tesla diffusion-weighted imaging and clinical assessments at baseline, and after 6 and 12 months. Using logistic regression, we examined the reliability of global FA at baseline as a predictor for psychosis transition after 12 months. We tested the predictive accuracy, sensitivity and specificity of global FA in a multivariate prediction model accounting for potential confounders to FA (head motion in scanner, age, gender, antipsychotic medication, parental socioeconomic status and activity level). In secondary analyses, we tested FA as a predictor of clinical symptoms and functional level using multivariate linear regression., Results: Ten UHR individuals had transitioned to psychosis after 12 months (9%). The model reliably predicted transition at 12 months (χ
2 = 17.595, p = 0.040), accounted for 15-33% of the variance in transition outcome with a sensitivity of 0.70, a specificity of 0.88 and AUC of 0.87. Global FA predicted level of UHR symptoms (R2 = 0.055, F = 6.084, p = 0.016) and functional level (R2 = 0.040, F = 4.57, p = 0.036) at 6 months, but not at 12 months., Conclusion: Global FA provided prognostic information on clinical outcome and symptom course of UHR individuals. Our findings suggest that the application of prediction models including neuroimaging data can inform clinical management on risk for psychosis transition., (© 2021 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)- Published
- 2021
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23. Changes in negative symptoms are linked to white matter changes in superior longitudinal fasciculus in individuals at ultra-high risk for psychosis.
- Author
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Kristensen TD, Glenthøj LB, Raghava JM, Syeda W, Mandl RCW, Wenneberg C, Krakauer K, Fagerlund B, Pantelis C, Glenthøj BY, Nordentoft M, and Ebdrup BH
- Subjects
- Anisotropy, Diffusion Magnetic Resonance Imaging methods, Humans, Nerve Net pathology, Psychotic Disorders diagnostic imaging, Psychotic Disorders pathology, White Matter diagnostic imaging, White Matter pathology
- Abstract
Aim: Growing evidence suggests that subtle white matter (WM) alterations are associated with psychopathology in individuals at ultra-high risk for psychosis (UHR). However, the longitudinal relationship between symptom progression and WM changes over time remains under-explored. Here, we examine associations between changes in clinical symptoms and changes in WM over six months in a large UHR-cohort., Methods: 110 UHR-individuals and 59 healthy controls underwent diffusion weighted imaging at baseline and after six months. Group × time effects on fractional anisotropy (FA) were tested globally and in four predefined regions of interest (ROIs) bilaterally using linear modelling with repeated measures. Correlations between the changes in clinical symptoms and FA changes in the ROIs were examined with Pearson's correlation. A partial least squares correlation-technique (PLS-C) explored multivariate associations between patterns of changes in psychopathology, regional FA and additional WM indices., Results: At baseline, UHR-individuals displayed significantly lower FA globally (p = 0.018; F = 12.274), in right superior longitudinal fasciculus (p = 0.02; Adj R
2 = 0.07) and in left uncinate fasciculus (p = 0.048; Adj R2 = 0.058) compared to controls (corrected). We identified a group × time interaction in global FA and right superior longitudinal fasciculus, but the finding did not survive multiple comparisons. However, an increase of negative symptoms in UHR-individuals correlated with FA increase in right superior longitudinal fasciculus (p = 0.048, corrected, r = 0.357), and this finding was supported by the multivariate PLS-C., Conclusion: We found a positive correlation with a moderate effect between change in negative symptoms and FA change over 6 months in right superior longitudinal fasciculus. This link appeared mainly to reflect a subgroup of UHR-individuals, which already at baseline presented as vulnerable., (Copyright © 2021 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2021
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24. Microstructural correlates of 23 Na relaxation in human brain at 7 Tesla.
- Author
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Kolbe SC, Syeda W, Blunck Y, Glarin R, Law M, Johnston LA, and Cleary JO
- Subjects
- Adult, Diffusion Magnetic Resonance Imaging instrumentation, Female, Humans, Male, Neuroimaging instrumentation, Young Adult, Diffusion Magnetic Resonance Imaging methods, Gray Matter diagnostic imaging, Models, Theoretical, Neuroimaging methods, Sodium, White Matter diagnostic imaging
- Abstract
23 Na provides the second strongest MR-observable signal in biological tissue and exhibits bi-exponential T2 ∗ relaxation in micro-environments such as the brain. There is significant interest in developing23 Na biomarkers for neurological diseases that are associated with sodium channel dysfunction such as multiple sclerosis and epilepsy. We have previously reported methods for acquisition of multi-echo sodium MRI and continuous distribution modelling of sodium relaxation properties as surrogate markers of brain microstructure. This study aimed to compare23 Na T2 ∗ relaxation times to more established measures of tissue microstructure derived from advanced diffusion MRI at 7 T. Six healthy volunteers were scanned using a 3D multi-echo radial ultra-short TE sequence using a dual-tuned1 H/23 Na birdcage coil, and a high-resolution multi-shell, high angular resolution diffusion imaging sequence using a 32-channel1 H receive coil.23 Na T2 ∗ relaxation parameters [mean T2 ∗ (T2 ∗ mean ) and fast relaxation fraction (T2 ∗ ff )] were calculated from a voxel-wise continuous gamma distribution signal model. White matter (restricted anisotropic diffusion) and grey matter (restricted isotropic diffusion) density were calculated from multi-shell multi-tissue constrained spherical deconvolution. Sodium parameters were compared with white and grey matter diffusion properties. Sodium T2 ∗ mean and T2 ∗ ff showed little variation across a range of white matter axonal fibre and grey matter densities. We conclude that sodium T2 ∗ relaxation parameters are not greatly influenced by relative differences in intra- and extracellular partial volumes. We suggest that care be taken when interpreting sodium relaxation changes in terms of tissue microstructure in healthy tissue., Competing Interests: Declaration of competing interest The authors report no conflicts of interest relating to this work., (Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2020
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25. A continuum of T 2 * components: Flexible fast fraction mapping in sodium MRI.
- Author
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Syeda W, Blunck Y, Kolbe S, Cleary JO, and Johnston LA
- Subjects
- Brain diagnostic imaging, Humans, Models, Statistical, Phantoms, Imaging, Image Processing, Computer-Assisted methods, Magnetic Resonance Imaging methods, Sodium Isotopes chemistry
- Abstract
Purpose: Parameter mapping in sodium MRI data is challenging due to inherently low SNR and spatial resolution, prompting the need to employ robust models and estimation techniques. This work aims to develop a continuum model of sodium T 2 * -decay to overcome the limitations of the commonly employed bi-exponential models. Estimates of mean T 2 * -decay and fast component fraction in tissue are emergent from the inferred continuum model., Methods: A closed-form continuum model was derived assuming a gamma distribution of T 2 * components. Sodium MRI was performed on four healthy human subjects and a phantom consisting of closely packed vials filled with an aqueous solution of varying sodium and agarose concentrations. The continuum model was applied to the phantom and in vivo human multi-echo 7T data. Parameter maps by voxelwise model-fitting were obtained., Results: The continuum model demonstrated comparable estimation performance to the bi-exponential model. The parameter maps provided improved contrast between tissue structures. The fast component fraction, an indicator of the heterogeneity of localised sodium motion regimes in tissue, was zero in CSF and high in WM structures., Conclusions: The continuum distribution model provides high quality, high contrast parameter maps, and informative voxelwise estimates of the relative weighting between fast and slow decay components., (© 2019 International Society for Magnetic Resonance in Medicine.)
- Published
- 2019
- Full Text
- View/download PDF
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