24 results on '"Swedish Childhood Cancer Foundation"'
Search Results
2. A Treatment Study Protocol for Participants 0-45 Years With Acute Lymphoblastic Leukaemia
- Author
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The Swedish Research Council, The Swedish Childhood Cancer Foundation, Pfizer, Servier, NordForsk, Aamu Pediatric Cancer Foundation, German Society for Pediatric Oncology and Hematology GPOH gGmbH, Clinical Trial Center North (CTC North GmbH & Co. KG), Belgium Health Care Knowledge Centre, Karolinska Institutet, Cancer Research UK, Fundação Rui Osório de Castro, Acreditar - Associação de Pais e Amigos das Crianças com Cancro, Grupo Português De Leucemias Pediátricas, Amgen, Nova Laboratories Limited, Danish Child Cancer Foundation, Danish Cancer Society, The Novo Nordic Foundation, Assistance Publique - Hôpitaux de Paris, Direction Générale de l'Offre de Soins, and Mats Heyman, MD, Associate Professor
- Published
- 2024
3. Cryotherapy for Prevention of Oral Mucositis in Children Undergoing Hematopoietic Stem Cell Transplantation
- Author
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The Swedish Childhood Cancer Foundation
- Published
- 2016
4. ARG1-expressing microglia show a distinct molecular signature and modulate postnatal development and function of the mouse brain
- Author
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Karolinska Institute, Swedish Research Council, Swedish Brain Foundation, Sigrid Juselius Foundation, Academy of Finland, Swedish Cultural Foundation, Swedish Cancer Society, Consejo Nacional de Ciencia y Tecnología (México), Fonds de la Recherche en Sante du Québec, Wenner-Gren Foundation, Ake Wiberg Foundation, Ministerio de Ciencia e Innovación (España), European Commission, Junta de Andalucía, Swedish Childhood Cancer Foundation, Canada Research Chairs, Stratoulias, Vassilis, Ruiz, Rocío, Kanatani, Shigeaki, Osman, Ahmed M., Keane, Lily, Armengol, José Ángel, Rodríguez-Moreno, Antonio, Murgoci, Adriana-Natalia, García-Domínguez, Irene, Alonso-Bellido, Isabel María, González Ibáñez, Fernando, Picard, Katherine, Vázquez Cabrera, Guillermo, Posada-Pérez, Mercedes, Vernoux, Nathalie, Tejera, Dario, Grabert, Kathleen, Cheray, Mathilde, González-Rodríguez, Patricia, Pérez-Villegas, Eva María, Martínez-Gallego, Irene, Lastra-Romero, Alejandro, Brodin, David, Ávila-Cariño, Javier, Cao, Yang, Airavaara, Mikko, Uhlén, Per, Heneka, Michael T., Tremblay, Marie-Ève, Blomgren, Klas, Venero, José L., Joseph, Bertrand, Karolinska Institute, Swedish Research Council, Swedish Brain Foundation, Sigrid Juselius Foundation, Academy of Finland, Swedish Cultural Foundation, Swedish Cancer Society, Consejo Nacional de Ciencia y Tecnología (México), Fonds de la Recherche en Sante du Québec, Wenner-Gren Foundation, Ake Wiberg Foundation, Ministerio de Ciencia e Innovación (España), European Commission, Junta de Andalucía, Swedish Childhood Cancer Foundation, Canada Research Chairs, Stratoulias, Vassilis, Ruiz, Rocío, Kanatani, Shigeaki, Osman, Ahmed M., Keane, Lily, Armengol, José Ángel, Rodríguez-Moreno, Antonio, Murgoci, Adriana-Natalia, García-Domínguez, Irene, Alonso-Bellido, Isabel María, González Ibáñez, Fernando, Picard, Katherine, Vázquez Cabrera, Guillermo, Posada-Pérez, Mercedes, Vernoux, Nathalie, Tejera, Dario, Grabert, Kathleen, Cheray, Mathilde, González-Rodríguez, Patricia, Pérez-Villegas, Eva María, Martínez-Gallego, Irene, Lastra-Romero, Alejandro, Brodin, David, Ávila-Cariño, Javier, Cao, Yang, Airavaara, Mikko, Uhlén, Per, Heneka, Michael T., Tremblay, Marie-Ève, Blomgren, Klas, Venero, José L., and Joseph, Bertrand
- Abstract
Molecular diversity of microglia, the resident immune cells in the CNS, is reported. Whether microglial subsets characterized by the expression of specific proteins constitute subtypes with distinct functions has not been fully elucidated. Here we describe a microglial subtype expressing the enzyme arginase-1 (ARG1; that is, ARG1+ microglia) that is found predominantly in the basal forebrain and ventral striatum during early postnatal mouse development. ARG1+ microglia are enriched in phagocytic inclusions and exhibit a distinct molecular signature, including upregulation of genes such as Apoe, Clec7a, Igf1, Lgals3 and Mgl2, compared to ARG1- microglia. Microglial-specific knockdown of Arg1 results in deficient cholinergic innervation and impaired dendritic spine maturation in the hippocampus where cholinergic neurons project, which in turn results in impaired long-term potentiation and cognitive behavioral deficiencies in female mice. Our results expand on microglia diversity and provide insights into microglia subtype-specific functions.
- Published
- 2023
5. Leveraging base-pair mammalian constraint to understand genetic variation and human disease
- Author
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Swedish Research Council, Knut and Alice Wallenberg Foundation, Swedish Cancer Society, Swedish Childhood Cancer Foundation, National Institute of Mental Health (US), Gladstone Institutes, National Institute on Drug Abuse (US), University College Dublin, National Human Genome Research Institute (US), National Institutes of Health (US), National Health and Medical Research Council (Australia), Juan, David [0000-0003-1912-9667], Marqués-Bonet, Tomàs [0000-0002-5597-3075], Muntané, Gerard [0000-0003-1541-8365], Navarro, Arcadi [0000-0003-2162-8246], Valenzuela, Alejandro [0000-0001-6120-6246], Sullivan, Patrick F., Meadows, Jennifer R. S., Gazal, Steven, Phan, BaDoi N., Li, Xue, Genereux, Diane P., Dong, Michael X., Bianchi, Matteo, Andrews, Gregory, Sakthikumar, Sharadha, Nordin, Jessika, Roy, Ananya, Christmas, Matthew J., Marinescu, Voichita D., Wang, Chao, Wallerman, Ola, Xue, James, Yao, Shuyang, Sun, Quan, Szatkiewicz, Jin, Wen, Jia, Huckins, Laura M., Lawler, Alyssa, Keough, Kathleen C., Zheng, Zhili, Zeng, Jian, Wray, Naomi R., Li, Yun, Johnson, Jessica, Chen, Jiawen, Zoonomia Consortium, Juan, David, Marqués-Bonet, Tomàs, Muntané, Gerard, Navarro, Arcadi, Serres-Armero, Aitor, Valenzuela, Alejandro, Paten, Benedict, Reilly, Steven K., Hughes, Graham M., Weng, Zhiping, Pollard, Katherine S., Pfenning, Andreas R., Forsberg-Nilsson, Karin, Karlsson, Elinor K., Lindblad-Toh, Kerstin, Swedish Research Council, Knut and Alice Wallenberg Foundation, Swedish Cancer Society, Swedish Childhood Cancer Foundation, National Institute of Mental Health (US), Gladstone Institutes, National Institute on Drug Abuse (US), University College Dublin, National Human Genome Research Institute (US), National Institutes of Health (US), National Health and Medical Research Council (Australia), Juan, David [0000-0003-1912-9667], Marqués-Bonet, Tomàs [0000-0002-5597-3075], Muntané, Gerard [0000-0003-1541-8365], Navarro, Arcadi [0000-0003-2162-8246], Valenzuela, Alejandro [0000-0001-6120-6246], Sullivan, Patrick F., Meadows, Jennifer R. S., Gazal, Steven, Phan, BaDoi N., Li, Xue, Genereux, Diane P., Dong, Michael X., Bianchi, Matteo, Andrews, Gregory, Sakthikumar, Sharadha, Nordin, Jessika, Roy, Ananya, Christmas, Matthew J., Marinescu, Voichita D., Wang, Chao, Wallerman, Ola, Xue, James, Yao, Shuyang, Sun, Quan, Szatkiewicz, Jin, Wen, Jia, Huckins, Laura M., Lawler, Alyssa, Keough, Kathleen C., Zheng, Zhili, Zeng, Jian, Wray, Naomi R., Li, Yun, Johnson, Jessica, Chen, Jiawen, Zoonomia Consortium, Juan, David, Marqués-Bonet, Tomàs, Muntané, Gerard, Navarro, Arcadi, Serres-Armero, Aitor, Valenzuela, Alejandro, Paten, Benedict, Reilly, Steven K., Hughes, Graham M., Weng, Zhiping, Pollard, Katherine S., Pfenning, Andreas R., Forsberg-Nilsson, Karin, Karlsson, Elinor K., and Lindblad-Toh, Kerstin
- Abstract
[INTRODUCTION] Thousands of genetic variants have been associated with human diseases and traits through genome-wide association studies (GWASs). Translating these discoveries into improved therapeutics requires discerning which variants among hundreds of candidates are causally related to disease risk. To date, only a handful of causal variants have been confirmed. Here, we leverage 100 million years of mammalian evolution to address this major challenge., [RATIONALE] We compared genomes from hundreds of mammals and identified bases with unusually few variants (evolutionarily constrained). Constraint is a measure of functional importance that is agnostic to cell type or developmental stage. It can be applied to investigate any heritable disease or trait and is complementary to resources using cell type– and time point–specific functional assays like Encyclopedia of DNA Elements (ENCODE) and Genotype-Tissue Expression (GTEx)., [RESULTS] Using constraint calculated across placental mammals, 3.3% of bases in the human genome are significantly constrained, including 57.6% of coding bases. Most constrained bases (80.7%) are noncoding. Common variants (allele frequency ≥ 5%) and low-frequency variants (0.5% ≤ allele frequency < 5%) are depleted for constrained bases (1.85 versus 3.26% expected by chance, P < 2.2 × 10−308). Pathogenic ClinVar variants are more constrained than benign variants (P < 2.2 × 10−16). The most constrained common variants are more enriched for disease single-nucleotide polymorphism (SNP)–heritability in 63 independent GWASs. The enrichment of SNP-heritability in constrained regions is greater (7.8-fold) than previously reported in mammals and is even higher in primates (11.1-fold). It exceeds the enrichment of SNP-heritability in nonsynonymous coding variants (7.2-fold) and fine-mapped expression quantitative trait loci (eQTL)–SNPs (4.8-fold). The enrichment peaks near constrained bases, with a log-linear decrease of SNP-heritability enrichment as a function of the distance to a constrained base. Zoonomia constraint scores improve functionally informed fine-mapping. Variants at sites constrained in mammals and primates have greater posterior inclusion probabilities and higher per-SNP contributions. In addition, using both constraint and functional annotations improves polygenic risk score accuracy across a range of traits. Finally, incorporating constraint information into the analysis of noncoding somatic variants in medulloblastomas identifies new candidate driver genes., [CONCLUSION] Genome-wide measures of evolutionary constraint can help discern which variants are functionally important. This information may accelerate the translation of genomic discoveries into the biological, clinical, and therapeutic knowledge that is required to understand and treat human disease.
- Published
- 2023
6. NK cells and solid tumors therapeutic potential and persisting obstacles
- Author
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Universidad de Sevilla. Departamento de Bioquímica Médica y Biología Molecular e Inmunología, 2019 Laura Ziskin Prize in Translational Research, Cancer Research Foundations of Radiumhemmet, Dept. of Radiation Oncology at Weill Cornell Medicine (New York, US), donations from Promontory (New York, US), Functional Genomics Initiative (New York, US), Leukemia and Lymphoma Society (LLS), Luke Heller TECPR2 Foundation (Boston, US), Lytix Biopharma (Oslo, Norway), NIH/NCI, Noxopharm (Chatswood, Australia), Onxeo (Paris, France), Ricerchiamo (Brescia, Italy), romontory (New York, US), Sotio a.s. (Prague, Czech Republic), Stand Up to Cancer (SU2C), Swedish Cancer Society, Swedish Childhood Cancer Foundation, US DoD BCRP, Tong, Le, Jiménez Cortegana, Carlos, Tay, Apple H.M., Wickström, Stina, Galluzzi, Lorenzo, Lundqvist, Andreas, Universidad de Sevilla. Departamento de Bioquímica Médica y Biología Molecular e Inmunología, 2019 Laura Ziskin Prize in Translational Research, Cancer Research Foundations of Radiumhemmet, Dept. of Radiation Oncology at Weill Cornell Medicine (New York, US), donations from Promontory (New York, US), Functional Genomics Initiative (New York, US), Leukemia and Lymphoma Society (LLS), Luke Heller TECPR2 Foundation (Boston, US), Lytix Biopharma (Oslo, Norway), NIH/NCI, Noxopharm (Chatswood, Australia), Onxeo (Paris, France), Ricerchiamo (Brescia, Italy), romontory (New York, US), Sotio a.s. (Prague, Czech Republic), Stand Up to Cancer (SU2C), Swedish Cancer Society, Swedish Childhood Cancer Foundation, US DoD BCRP, Tong, Le, Jiménez Cortegana, Carlos, Tay, Apple H.M., Wickström, Stina, Galluzzi, Lorenzo, and Lundqvist, Andreas
- Abstract
Natural killer (NK) cells, which are innate lymphocytes endowed with potent cytotoxic activity, have recently attracted attention as potential anticancer therapeutics. While NK cells mediate encouraging responses in patients with leukemia, the therapeutic effects of NK cell infusion in patients with solid tumors are limited. Preclinical and clinical data suggest that the efficacy of NK cell infusion against solid malignancies is hampered by several factors including inadequate tumor infiltration and persistence/activation in the tumor microenvironment (TME). A number of metabolic features of the TME including hypoxia as well as elevated levels of adenosine, reactive oxygen species, and prostaglandins negatively affect NK cell activity. Moreover, cancer-associated fibroblasts, tumor-associated macrophages, myeloid-derived suppressor cells, and regulatory T cells actively suppress NK cell-dependent anticancer immunity. Here, we review the metabolic and cellular barriers that inhibit NK cells in solid neoplasms as we discuss potential strategies to circumvent such obstacles towards superior therapeutic activity.
- Published
- 2022
7. Integrin-Mediated Adhesion Promotes Centrosome Separation in Early Mitosis
- Author
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Swedish Childhood Cancer Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, Kamranvar, Siamak A., Kumar Gupta, Deepesh, Wasberg, Anishia, Liu, Liangwen, Roig, Joan, Johansson, Staffan, Swedish Childhood Cancer Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, Kamranvar, Siamak A., Kumar Gupta, Deepesh, Wasberg, Anishia, Liu, Liangwen, Roig, Joan, and Johansson, Staffan
- Abstract
Integrin-mediated adhesion to the extracellular matrix is a key regulator of the cell cycle, as demonstrated for the passage of the G1/S checkpoint and the completion of cytokinetic abscission. Here, integrin-dependent regulation of the cell cycle in G2 and early M phases was investigated. The progression through the G2 and M phases was monitored by live-cell imaging and immunofluorescence staining in adherent and non-adherent fibroblast cells. Non-adherent cells, as well as adherent cells lacking FAK activity due to suppressed expression or pharmacological inhibition, exhibited a prolonged G2 phase and severely defect centrosome separation, resulting in delayed progress through the early mitotic stages. The activation of the critical mitotic regulator PLK1 and its indirect target Eg5, a kinesin-family motor protein driving the centrosome separation, were reduced in the cells lacking FAK activity. Furthermore, the absence of integrin adhesion or FAK activity destabilized the structural integrity of centrosomes and often caused detachment of pericentriolar material from the centrioles. These data identify a novel adhesion-dependent mechanism by which integrins via FAK and PLK1 contribute to the regulation of the cell cycle in the G2 and early M phases, and to the maintenance of genome integrity.
- Published
- 2022
8. The multiple faces of mnt and its role as a myc modulator
- Author
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Swedish Cancer Society, Swedish Childhood Cancer Foundation, Swedish Research Council, Karolinska Institute, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Liaño-Pons, Judith, Arsenian-Henriksson, Marie, León, Javier, Swedish Cancer Society, Swedish Childhood Cancer Foundation, Swedish Research Council, Karolinska Institute, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Liaño-Pons, Judith, Arsenian-Henriksson, Marie, and León, Javier
- Abstract
MNT is a crucial modulator of MYC, controls several cellular functions, and is activated in most human cancers. It is the largest, most divergent, and most ubiquitously expressed protein of the MXD family. MNT was first described as a MYC antagonist and tumor suppressor. Indeed, 10% of human tumors present deletions of one MNT allele. However, some reports show that MNT functions in cooperation with MYC by maintaining cell proliferation, promoting tumor cell survival, and supporting MYC-driven tumorigenesis in cellular and animal models. Although MAX was originally considered MNT’s obligate partner, our recent findings demonstrate that MNT also works independently. MNT forms homodimers and interacts with proteins both outside and inside of the proximal MYC network. These complexes are involved in a wide array of cellular processes, from transcriptional repression via SIN3 to the modulation of metabolism through MLX as well as immunity and apoptosis via REL. In this review, we discuss the present knowledge of MNT with a special focus on its interactome, which sheds light on the complex and essential role of MNT in cell biology.
- Published
- 2021
9. Microglial subtypes: diversity within the microglial community
- Author
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Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Canada Research Chairs, Swedish Research Council, Swedish Childhood Cancer Foundation, Swedish Cancer Society, Swedish Brain Foundation, Karolinska Institutet Foundation, Agencia Estatal de Investigación (España), Stratoulias, Vassilis, Venero, José L., Tremblay, Marie‐Ève, Joseph, Bertrand, Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Canada Research Chairs, Swedish Research Council, Swedish Childhood Cancer Foundation, Swedish Cancer Society, Swedish Brain Foundation, Karolinska Institutet Foundation, Agencia Estatal de Investigación (España), Stratoulias, Vassilis, Venero, José L., Tremblay, Marie‐Ève, and Joseph, Bertrand
- Abstract
Microglia are brain‐resident macrophages forming the first active immune barrier in the central nervous system. They fulfill multiple functions across development and adulthood and under disease conditions. Current understanding revolves around microglia acquiring distinct phenotypes upon exposure to extrinsic cues in their environment. However, emerging evidence suggests that microglia display differences in their functions that are not exclusively driven by their milieu, rather by the unique properties these cells possess. This microglial intrinsic heterogeneity has been largely overlooked, favoring the prevailing view that microglia are a single‐cell type endowed with spectacular plasticity, allowing them to acquire multiple phenotypes and thereby fulfill their numerous functions in health and disease. Here, we review the evidence that microglia might form a community of cells in which each member (or “subtype”) displays intrinsic properties and performs unique functions. Distinctive features and functional implications of several microglial subtypes are considered, across contexts of health and disease. Finally, we suggest that microglial subtype categorization shall be based on function and we propose ways for studying them. Hence, we advocate that plasticity (reaction states) and diversity (subtypes) should both be considered when studying the multitasking microglia.
- Published
- 2019
10. Glioma-induced inhibition of caspase-3 in microglia promotes a tumor-supportive phenotype
- Author
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Karolinska Institutet Foundation, Swedish Childhood Cancer Foundation, Swedish Research Council, Swedish Cancer Society, Ministerio de Economía y Competitividad (España), European Commission, Swedish Brain Foundation, Government of Sweden, Shen, Xianli, Burguillos, Miguel Ángel, Osman, Ahmed M., Frijhoff, Jeroen, Carrillo-Jiménez, Alejandro, Kanatani, Sachie, Augsten, Martin, Saidi, Dalel, Rodhe, Johanna, Kavanagh, Edel, Rongvaux, Anthony, Rraklli, Vilma, Nyman, Ulrika, Holmberg, Johan, Östman, Arne, Flavell, Richard A., Barragán, Antonio, Venero, José L., Blomgren, Klas, Joseph, Bertrand, Karolinska Institutet Foundation, Swedish Childhood Cancer Foundation, Swedish Research Council, Swedish Cancer Society, Ministerio de Economía y Competitividad (España), European Commission, Swedish Brain Foundation, Government of Sweden, Shen, Xianli, Burguillos, Miguel Ángel, Osman, Ahmed M., Frijhoff, Jeroen, Carrillo-Jiménez, Alejandro, Kanatani, Sachie, Augsten, Martin, Saidi, Dalel, Rodhe, Johanna, Kavanagh, Edel, Rongvaux, Anthony, Rraklli, Vilma, Nyman, Ulrika, Holmberg, Johan, Östman, Arne, Flavell, Richard A., Barragán, Antonio, Venero, José L., Blomgren, Klas, and Joseph, Bertrand
- Abstract
Glioma cells recruit and exploit microglia (the resident immune cells of the brain) for their proliferation and invasion ability. The underlying molecular mechanism used by glioma cells to transform microglia into a tumor-supporting phenotype has remained elusive. We found that glioma-induced microglia conversion was coupled to a reduction in the basal activity of microglial caspase-3 and increased S-nitrosylation of mitochondria-associated caspase-3 through inhibition of thioredoxin-2 activity, and that inhibition of caspase-3 regulated microglial tumor-supporting function. Furthermore, we identified the activity of nitric oxide synthase 2 (NOS2, also known as iNOS) originating from the glioma cells as a driving stimulus in the control of microglial caspase-3 activity. Repression of glioma NOS2 expression in vivo led to a reduction in both microglia recruitment and tumor expansion, whereas depletion of microglial caspase-3 gene promoted tumor growth. Our results provide evidence that inhibition of the denitrosylation of S-nitrosylated procaspase-3 mediated by the redox protein Trx2 is a part of the microglial pro-tumoral activation pathway initiated by glioma cancer cells.
- Published
- 2016
11. Tudor staphylococcal nuclease: biochemistry and functions
- Author
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Olle Engkvist Foundation, Russian Foundation for Basic Research, Russian Science Foundation, Knut and Alice Wallenberg Foundation, Russian Government, Swedish Cancer Society, Cancer Society in Stockholm, Swedish Childhood Cancer Foundation, Swedish Foundation for Strategic Research, Swedish Research Council, Gutiérrez-Beltrán, Emilio, Denisenko, Tatiana V., Zhivotovsky, Boris, Bozhkov, Peter V., Olle Engkvist Foundation, Russian Foundation for Basic Research, Russian Science Foundation, Knut and Alice Wallenberg Foundation, Russian Government, Swedish Cancer Society, Cancer Society in Stockholm, Swedish Childhood Cancer Foundation, Swedish Foundation for Strategic Research, Swedish Research Council, Gutiérrez-Beltrán, Emilio, Denisenko, Tatiana V., Zhivotovsky, Boris, and Bozhkov, Peter V.
- Abstract
Tudor staphylococcal nuclease (TSN, also known as Tudor-SN, SND1 or p100) is an evolutionarily conserved protein with invariant domain composition, represented by tandem repeat of staphylococcal nuclease domains and a tudor domain. Conservation along significant evolutionary distance, from protozoa to plants and animals, suggests important physiological functions for TSN. It is known that TSN is critically involved in virtually all pathways of gene expression, ranging from transcription to RNA silencing. Owing to its high protein-protein binding affinity coexistent with enzymatic activity, TSN can exert its biochemical function by acting as both a scaffolding molecule of large multiprotein complexes and/or as a nuclease. TSN is indispensible for normal development and stress resistance, whereas its increased expression is closely associated with various types of cancer. Thus, TSN is an attractive target for anti-cancer therapy and a potent tumor marker. Considering ever increasing interest to further understand a multitude of TSN-mediated processes and a mechanistic role of TSN in these processes, here we took an attempt to summarize and update the available information about this intriguing multifunctional protein.
- Published
- 2016
12. NK cells and solid tumors: therapeutic potential and persisting obstacles
- Author
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Le Tong, Carlos Jiménez-Cortegana, Apple H.M. Tay, Stina Wickström, Lorenzo Galluzzi, Andreas Lundqvist, Universidad de Sevilla. Departamento de Bioquímica Médica y Biología Molecular e Inmunología, 2019 Laura Ziskin Prize in Translational Research, Cancer Research Foundations of Radiumhemmet, Dept. of Radiation Oncology at Weill Cornell Medicine (New York, US), donations from Promontory (New York, US), Functional Genomics Initiative (New York, US), Leukemia and Lymphoma Society (LLS), Luke Heller TECPR2 Foundation (Boston, US), Lytix Biopharma (Oslo, Norway), NIH/NCI, Noxopharm (Chatswood, Australia), Onxeo (Paris, France), Ricerchiamo (Brescia, Italy), romontory (New York, US), Sotio a.s. (Prague, Czech Republic), Stand Up to Cancer (SU2C), Swedish Cancer Society, Swedish Childhood Cancer Foundation, and US DoD BCRP
- Subjects
PD-L1 ,CAR T cells ,Cancer Research ,Myeloid-Derived Suppressor Cells ,CGAS/STING1 signaling ,Adoptive cell therapy ,Killer Cells, Natural ,Immune checkpoint inhibitors ,TREG cells ,Oncology ,Neoplasms ,Tumor Microenvironment ,Molecular Medicine ,Humans - Abstract
Natural killer (NK) cells, which are innate lymphocytes endowed with potent cytotoxic activity, have recently attracted attention as potential anticancer therapeutics. While NK cells mediate encouraging responses in patients with leukemia, the therapeutic effects of NK cell infusion in patients with solid tumors are limited. Preclinical and clinical data suggest that the efficacy of NK cell infusion against solid malignancies is hampered by several factors including inadequate tumor infiltration and persistence/activation in the tumor microenvironment (TME). A number of metabolic features of the TME including hypoxia as well as elevated levels of adenosine, reactive oxygen species, and prostaglandins negatively affect NK cell activity. Moreover, cancer-associated fibroblasts, tumor-associated macrophages, myeloid-derived suppressor cells, and regulatory T cells actively suppress NK cell-dependent anticancer immunity. Here, we review the metabolic and cellular barriers that inhibit NK cells in solid neoplasms as we discuss potential strategies to circumvent such obstacles towards superior therapeutic activity.
- Published
- 2022
13. Integrin-Mediated Adhesion Promotes Centrosome Separation in Early Mitosis
- Author
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Kamranvar, Siamak A., Gupta, Deepesh Kumar, Wasberg, Anishia, Liu, Liangwen, Roig, Joan, Johansson, Staffan, Swedish Childhood Cancer Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), and Generalitat de Catalunya
- Subjects
Centrosome ,FAK ,Biochemistry and Molecular Biology ,Mitosis ,Integrin ,PLK1 ,Biokemi och molekylärbiologi ,Eg5 - Abstract
Integrin-mediated adhesion to the extracellular matrix is a key regulator of the cell cycle, as demonstrated for the passage of the G1/S checkpoint and the completion of cytokinetic abscission. Here, integrin-dependent regulation of the cell cycle in G2 and early M phases was investigated. The progression through the G2 and M phases was monitored by live-cell imaging and immunofluorescence staining in adherent and non-adherent fibroblast cells. Non-adherent cells, as well as adherent cells lacking FAK activity due to suppressed expression or pharmacological inhibition, exhibited a prolonged G2 phase and severely defect centrosome separation, resulting in delayed progress through the early mitotic stages. The activation of the critical mitotic regulator PLK1 and its indirect target Eg5, a kinesin-family motor protein driving the centrosome separation, were reduced in the cells lacking FAK activity. Furthermore, the absence of integrin adhesion or FAK activity destabilized the structural integrity of centrosomes and often caused detachment of pericentriolar material from the centrioles. These data identify a novel adhesion-dependent mechanism by which integrins via FAK and PLK1 contribute to the regulation of the cell cycle in the G2 and early M phases, and to the maintenance of genome integrity., This research was funded by Swedish Cancer Foundation, grant number 19 0531 Pj. J.R. is funded by grant PGC2018-096307-B-I00 (MCIN/AEI/10.13039/501100011033/FEDER “Una manera de hacer Europa”), and by network grant 2017 SGR 1089 (AGAUR, Generalitat de Catalunya).
- Published
- 2022
14. The Multiple Faces of MNT and Its Role as a MYC Modulator
- Author
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Judit Liaño-Pons, Javier León, Marie Arsenian-Henriksson, Universidad de Cantabria, Swedish Cancer Society, Swedish Childhood Cancer Foundation, Swedish Research Council, Karolinska Institute, Ministerio de Ciencia, Innovación y Universidades (España), and Agencia Estatal de Investigación (España)
- Subjects
Cancer Research ,proliferation ,Proliferation ,Review ,MYC ,Biology ,medicine.disease_cause ,Interactome ,MNT ,law.invention ,Transcriptional regulation ,law ,medicine ,transcriptional regulation ,Allele ,MLX ,RC254-282 ,Cancer ,Cell growth ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Cell biology ,Oncology ,Apoptosis ,REL ,Suppressor ,Carcinogenesis ,MAX - Abstract
© 2021 by the authors., MNT is a crucial modulator of MYC, controls several cellular functions, and is activated in most human cancers. It is the largest, most divergent, and most ubiquitously expressed protein of the MXD family. MNT was first described as a MYC antagonist and tumor suppressor. Indeed, 10% of human tumors present deletions of one MNT allele. However, some reports show that MNT functions in cooperation with MYC by maintaining cell proliferation, promoting tumor cell survival, and supporting MYC-driven tumorigenesis in cellular and animal models. Although MAX was originally considered MNT’s obligate partner, our recent findings demonstrate that MNT also works independently. MNT forms homodimers and interacts with proteins both outside and inside of the proximal MYC network. These complexes are involved in a wide array of cellular processes, from transcriptional repression via SIN3 to the modulation of metabolism through MLX as well as immunity and apoptosis via REL. In this review, we discuss the present knowledge of MNT with a special focus on its interactome, which sheds light on the complex and essential role of MNT in cell biology., J.L.-P. was supported by a postdoctoral scholarship from the Radiumhemmet Research Funds, Stockholm. M.A.-H. was supported by grants from the Swedish Cancer Society, the Swedish Childhood Cancer Fund, the Swedish Research Council, Radiumhemmet Research Funds, and Karolinska Institutet, and J.L. was supported by grant SAF2017-88026-R from Agencia Estatal de Investigación, from the Spanish Government.
- Published
- 2021
15. The multiple faces of mnt and its role as a myc modulator
- Author
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Liaño-Pons, Judith, Arsenian-Henriksson, Marie, León, Javier, Swedish Cancer Society, Swedish Childhood Cancer Foundation, Swedish Research Council, Karolinska Institute, Ministerio de Ciencia, Innovación y Universidades (España), and Agencia Estatal de Investigación (España)
- Subjects
Transcriptional regulation ,REL ,Proliferation ,MYC ,MNT ,MAX ,Cancer - Abstract
© 2021 by the authors. MNT is a crucial modulator of MYC, controls several cellular functions, and is activated in most human cancers. It is the largest, most divergent, and most ubiquitously expressed protein of the MXD family. MNT was first described as a MYC antagonist and tumor suppressor. Indeed, 10% of human tumors present deletions of one MNT allele. However, some reports show that MNT functions in cooperation with MYC by maintaining cell proliferation, promoting tumor cell survival, and supporting MYC-driven tumorigenesis in cellular and animal models. Although MAX was originally considered MNT’s obligate partner, our recent findings demonstrate that MNT also works independently. MNT forms homodimers and interacts with proteins both outside and inside of the proximal MYC network. These complexes are involved in a wide array of cellular processes, from transcriptional repression via SIN3 to the modulation of metabolism through MLX as well as immunity and apoptosis via REL. In this review, we discuss the present knowledge of MNT with a special focus on its interactome, which sheds light on the complex and essential role of MNT in cell biology. J.L.-P. was supported by a postdoctoral scholarship from the Radiumhemmet Research Funds, Stockholm. M.A.-H. was supported by grants from the Swedish Cancer Society, the Swedish Childhood Cancer Fund, the Swedish Research Council, Radiumhemmet Research Funds, and Karolinska Institutet, and J.L. was supported by grant SAF2017-88026-R from Agencia Estatal de Investigación, from the Spanish Government.
- Published
- 2021
16. Glioma-induced inhibition of caspase-3 in microglia promotes a tumor-supportive phenotype
- Author
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José L. Venero, Ahmed M. Osman, Alejandro Carrillo-Jimenez, Johan Holmberg, Xianli Shen, Antonio Barragan, Sachie Kanatani, Bertrand Joseph, Richard A. Flavell, Klas Blomgren, Johanna Rodhe, Ulrika Nyman, Arne Östman, Jeroen Frijhoff, Anthony Rongvaux, Edel Kavanagh, Dalel Saidi, Martin Augsten, Vilma Rraklli, Miguel Angel Burguillos, Karolinska Institutet Foundation, Swedish Childhood Cancer Foundation, Swedish Research Council, Swedish Cancer Society, Ministerio de Economía y Competitividad (España), European Commission, Swedish Brain Foundation, Government of Sweden, RS: CARIM - R3.10 - Utilising network pharmacology and common mechanisms for cardiovascular target validation and drug discovery, Pharmacology and Personalised Medicine, Burguillos, Miguel Angel [0000-0002-3165-9997], and Apollo - University of Cambridge Repository
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Male ,0301 basic medicine ,Immunology ,Nitric Oxide Synthase Type II ,Caspase 3 ,Mitochondrial Proteins ,Mice ,03 medical and health sciences ,Thioredoxins ,Immune system ,Cell Movement ,Cell Line, Tumor ,Glioma ,medicine ,Tumor Expansion ,cancer ,Animals ,Humans ,Immunology and Allergy ,innate immune cells ,biology ,Microglia ,Nitric oxide synthase 2 ,medicine.disease ,Mitochondria ,Tumor Burden ,Enzyme Activation ,Disease Models, Animal ,Phenotype ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,Gene Knockdown Techniques ,Cancer cell ,biology.protein ,Cancer research ,Heterografts - Abstract
Glioma cells recruit and exploit microglia (the resident immune cells of the brain) for their proliferation and invasion ability. The underlying molecular mechanism used by glioma cells to transform microglia into a tumor-supporting phenotype has remained elusive. We found that glioma-induced microglia conversion was coupled to a reduction in the basal activity of microglial caspase-3 and increased S-nitrosylation of mitochondria-associated caspase-3 through inhibition of thioredoxin-2 activity, and that inhibition of caspase-3 regulated microglial tumor-supporting function. Furthermore, we identified the activity of nitric oxide synthase 2 (NOS2, also known as iNOS) originating from the glioma cells as a driving stimulus in the control of microglial caspase-3 activity. Repression of glioma NOS2 expression in vivo led to a reduction in both microglia recruitment and tumor expansion, whereas depletion of microglial caspase-3 gene promoted tumor growth. Our results provide evidence that inhibition of the denitrosylation of S-nitrosylated procaspase-3 mediated by the redox protein Trx2 is a part of the microglial pro-tumoral activation pathway initiated by glioma cancer cells., Supported by the Karolinska Institutet Foundation (X.S. and B.J.), the Swedish Childhood Cancer Foundation (A.M.O., B.J. and K.B.), the Swedish Research Council (M.A.B. and B.J.), the Strategic Research Programme in Cancer (B.J.), the Strategic Research Programme in Neuroscience (K.B.), the Swedish Cancer Foundation (B.J.), Spanish MINECO/FEDER/UE (J.L.V.), the Swedish Cancer Society (B.J.), the Swedish Brain Foundation (B.J.) and Swedish governmental grants for researchers working in healthcare (K.B.).
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- 2016
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17. Microglial subtypes: diversity within the microglial community
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Marie-Ève Tremblay, Vassilis Stratoulias, José L. Venero, Bertrand Joseph, Universidad de Sevilla. Departamento de Bioquímica y Biología Molecular, Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Canada Research Chairs, Swedish Research Council, Swedish Childhood Cancer Foundation, Swedish Cancer Society, Swedish Brain Foundation, Karolinska Institutet Foundation, and Agencia Estatal de Investigación (España)
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media_common.quotation_subject ,Central nervous system ,Cell Plasticity ,Immunology ,microglia ,Disease ,Review ,Biology ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,0302 clinical medicine ,homeostasis ,medicine ,Animals ,Humans ,Homeostasis ,Molecular Biology ,030304 developmental biology ,media_common ,Subtypes ,0303 health sciences ,General Immunology and Microbiology ,Microglia ,General Neuroscience ,subtypes ,Immune barrier ,Phenotype ,medicine.anatomical_structure ,Heterogeneity ,heterogeneity ,Neuroscience ,030217 neurology & neurosurgery ,Diversity (politics) - Abstract
Microglia are brain‐resident macrophages forming the first active immune barrier in the central nervous system. They fulfill multiple functions across development and adulthood and under disease conditions. Current understanding revolves around microglia acquiring distinct phenotypes upon exposure to extrinsic cues in their environment. However, emerging evidence suggests that microglia display differences in their functions that are not exclusively driven by their milieu, rather by the unique properties these cells possess. This microglial intrinsic heterogeneity has been largely overlooked, favoring the prevailing view that microglia are a single‐cell type endowed with spectacular plasticity, allowing them to acquire multiple phenotypes and thereby fulfill their numerous functions in health and disease. Here, we review the evidence that microglia might form a community of cells in which each member (or “subtype”) displays intrinsic properties and performs unique functions. Distinctive features and functional implications of several microglial subtypes are considered, across contexts of health and disease. Finally, we suggest that microglial subtype categorization shall be based on function and we propose ways for studying them. Hence, we advocate that plasticity (reaction states) and diversity (subtypes) should both be considered when studying the multitasking microglia., This work was funded by grants from the Spanish Ministerio de Ciencia, Innovación y Universidades/FEDER/UE RTI2018‐098645‐B‐100 (J.L.V.), the Canada Research Chair (Tier 2) of Neuroimmune Plasticity in Health and Therapy to (M.E.T.), the TracInflam grant from ERA‐NET NEURON Neuroinflammation (M.E.T. and B.J.), the Swedish Research Council (B.J.), the Swedish Childhood Cancer Foundation (B.J.), the Swedish Cancer Foundation (B.J.), the Swedish Cancer Society (B.J.), the Swedish Brain Foundation (B.J.), and the Karolinska Institutet Foundation (B.J.).
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- 2019
18. Magical attachment: Children in magical relations with hospital clowns
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Lotta Linge and The Swedish Childhood Cancer Foundation
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Psychoanalysis ,Context (language use) ,humor development ,Hospital clowns, child perspective, psychological theory, humor development, magical attachment, well-being ,well-being ,Psychological Theory ,Psychology ,Fantasy ,Relation (history of concept) ,lcsh:R5-920 ,Magic (illusion) ,psychological theory ,Health Policy ,Interpretation (philosophy) ,Perspective (graphical) ,Hospital clowns ,Issues, ethics and legal aspects ,child perspective ,Well-being ,Empirical/Theorethical Studies ,Fundamentals and skills ,magical attachment ,lcsh:Medicine (General) ,Gerontology ,Social psychology - Abstract
The aim of the present study was to achieve a theoretical understanding of several different-age children’s experiences of magic relations with hospital clowns in the context of medical care, and to do so using psychological theory and a child perspective. The method used was qualitative and focused on nine children. The results showed that age was important to consider in better understanding how the children experienced the relation with the hospital clowns, how they described the magical aspects of the encounter and how they viewed the importance of clown encounters to their own well-being. The present theoretical interpretation characterized the encounter with hospital clowns as a magical safe area , an intermediate area between fantasy and reality. The discussion presented a line of reasoning concerning a magical attachment between the child and the hospital clowns, stating that this attachment: a) comprised a temporary relation; b) gave anonymity; c) entailed reversed roles; and d) created an emotional experience of boundary-transcending opportunities. Key words: Hospital clowns, child perspective, psychological theory, humor development, magical attachment, well-being (Published: 24 February 2012) Citation: Int J Qualitative Stud Health Well-being 2012, 7 : 11862 - DOI: 10.3402/qhw.v7i0.11862
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- 2012
19. Tudor staphylococcal nuclease: biochemistry and functions
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Tatiana V. Denisenko, Boris Zhivotovsky, Peter V. Bozhkov, Emilio Gutierrez-Beltran, Olle Engkvist Foundation, Russian Foundation for Basic Research, Russian Science Foundation, Knut and Alice Wallenberg Foundation, Russian Government, Swedish Cancer Society, Cancer Society in Stockholm, Swedish Childhood Cancer Foundation, Swedish Foundation for Strategic Research, and Swedish Research Council
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0301 basic medicine ,SND1 ,Tudor domain ,Transcription, Genetic ,Carcinogenesis ,RNA Splicing ,Review ,Models, Biological ,03 medical and health sciences ,Tandem repeat ,Transcription (biology) ,Gene expression ,Animals ,Humans ,Micrococcal Nuclease ,Molecular Biology ,chemistry.chemical_classification ,Nuclease ,Cell Death ,biology ,Cell Biology ,RNA silencing ,030104 developmental biology ,Enzyme ,chemistry ,Biochemistry ,biology.protein - Abstract
Tudor staphylococcal nuclease (TSN, also known as Tudor-SN, SND1 or p100) is an evolutionarily conserved protein with invariant domain composition, represented by tandem repeat of staphylococcal nuclease domains and a tudor domain. Conservation along significant evolutionary distance, from protozoa to plants and animals, suggests important physiological functions for TSN. It is known that TSN is critically involved in virtually all pathways of gene expression, ranging from transcription to RNA silencing. Owing to its high protein-protein binding affinity coexistent with enzymatic activity, TSN can exert its biochemical function by acting as both a scaffolding molecule of large multiprotein complexes and/or as a nuclease. TSN is indispensible for normal development and stress resistance, whereas its increased expression is closely associated with various types of cancer. Thus, TSN is an attractive target for anti-cancer therapy and a potent tumor marker. Considering ever increasing interest to further understand a multitude of TSN-mediated processes and a mechanistic role of TSN in these processes, here we took an attempt to summarize and update the available information about this intriguing multifunctional protein., This work was supported by grants from Knut and Alice Wallenberg Foundation (to PVB) and the Russian Science Foundation (14-25-00056; to BZ). The work in our laboratories is also supported by grants from the Olle Engkvist Foundation (to PVB), Pehrssons Fund (to PVB), the Russian Foundation for Basic Research (to TVD) and the Russian President Fund (to BZ), as well as the Stockholm and Swedish Cancer Societies (to BZ), the Swedish Childhood Cancer Foundation (to BZ), the Swedish Foundation for Strategic Research (to PVB) and the Swedish Research Council (to PVB and BZ).
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- 2016
20. Caspase-8 inhibition represses initial human monocyte activation in septic shock model
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Johanna Rodhe, José Antonio Pérez-Simón, Teresa Caballero-Velázquez, Luis Ignacio Sánchez-Abarca, Antonio J. Herrera, José L. Venero, Alejandro Carrillo-Jimenez, P Vlachos, Maria Jose Oliva-Martin, Bertrand Joseph, Albert García-Quintanilla, Universidad de Sevilla. Departamento de Bioquímica y Biología Molecular, Ministerio de Economía y Competitividad (España), European Commission, Swedish Research Council, Swedish Childhood Cancer Foundation, Swedish Cancer Society, Swedish Parkinson Foundation, Swedish Brain Foundation, [Jose Oliva-Martin, Maria] Univ Seville, Fac Pharm, Dept Biochem & Mol Biol, Seville, Spain, [Carrillo-Jimenez, Alejandro] Univ Seville, Fac Pharm, Dept Biochem & Mol Biol, Seville, Spain, [Jose Herrera, Antonio] Univ Seville, Fac Pharm, Dept Biochem & Mol Biol, Seville, Spain, [Garcia-Quintanilla, Albert] Univ Seville, Fac Pharm, Dept Biochem & Mol Biol, Seville, Spain, [Luis Venero, Jose] Univ Seville, Fac Pharm, Dept Biochem & Mol Biol, Seville, Spain, [Jose Oliva-Martin, Maria] Univ Seville, CSIC, Inst Biomed Sevilla IBiS, Seville, Spain, [Rodhe, Johanna] Univ Seville, CSIC, Inst Biomed Sevilla IBiS, Seville, Spain, [Vlachos, Pinelopi] Univ Seville, CSIC, Inst Biomed Sevilla IBiS, Seville, Spain, [Joseph, Bertrand] Univ Seville, CSIC, Inst Biomed Sevilla IBiS, Seville, Spain, [Jose Oliva-Martin, Maria] Karolinska Inst, Canc Ctr Karolinska, Dept Oncol Pathol, Stockholm, Sweden, [Sanchez-Abarca, Luis Ignacio] Karolinska Inst, Canc Ctr Karolinska, Dept Oncol Pathol, Stockholm, Sweden, [Caballero-Velazquez, Teresa] Karolinska Inst, Canc Ctr Karolinska, Dept Oncol Pathol, Stockholm, Sweden, [Perez-Simon, Jose Antonio] Karolinska Inst, Canc Ctr Karolinska, Dept Oncol Pathol, Stockholm, SwedenHosp Univ Virgen del Rocio, Dept Haematol, Malaga, Spain, MINECO/FEDER, UE, Junta of Andalucia, and Swedish Cancer Foundation
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0301 basic medicine ,Monocyte ,Monocytes ,caspase-8 ,sepsis ,Mice ,Mechanisms ,Il-1-beta ,Cells, Cultured ,Caspase ,Mice, Knockout ,Caspase 8 ,biology ,Pro-inflammatory activation ,Switch ,Caspase Inhibitors ,Shock, Septic ,Cell biology ,medicine.anatomical_structure ,Oncology ,Necroptosis ,monocyte ,Cytokines ,medicine.symptom ,Cell activation ,Caspase-8 ,Programmed cell death ,Macrophage differentiation ,necroptosis ,Inflammation ,03 medical and health sciences ,Sepsis ,Pathology Section ,medicine ,Animals ,Humans ,Septic shock ,medicine.disease ,Research Paper: Pathology ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,inflammation ,Immunology ,biology.protein ,Surviving sepsis ,Cell-death - Abstract
In septic patients, the onset of septic shock occurs due to the over-activation of monocytes. We tested the therapeutic potential of directly targeting innate immune cell activation to limit the cytokine storm and downstream phases. We initially investigated whether caspase-8 could be an appropriate target given it has recently been shown to be involved in microglial activation. We found that LPS caused a mild increase in caspase-8 activity and that the caspase-8 inhibitor IETD-fmk partially decreased monocyte activation. Furthermore, caspase-8 inhibition induced necroptotic cell death of activated monocytes. Despite inducing necroptosis, caspase-8 inhibition reduced LPS-induced expression and release of IL-1β and IL-10. Thus, blocking monocyte activation has positive effects on both the pro and anti-inflammatory phases of septic shock. We also found that in primary mouse monocytes, caspase-8 inhibition did not reduce LPS-induced activation or induce necroptosis. On the other hand, broad caspase inhibitors, which have already been shown to improve survival in mouse models of sepsis, achieved both. Thus, given that monocyte activation can be regulated in humans via the inhibition of a single caspase, we propose that the therapeutic use of caspase-8 inhibitors could represent a more selective alternative that blocks both phases of septic shock at the source., This work was supported by grants SAF2012-39029 and SAF2015-64171R (MINECO/FEDER, UE), the Junta of Andalucía (P10-CTS-6494), the Swedish Research Council, the Swedish Childhood Cancer Foundation, the Swedish Cancer Foundation, Swedish Parkinson Foundation and the Swedish Brain Foundation.
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- 2016
21. Low/Negative Expression of PDGFR-alpha Identifies the Candidate Primary Mesenchymal Stromal Cells in Adult Human Bone Marrow
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Roshanak Ghazanfari, Stefan Scheding, Marja Ekblom, Joan Isern, Nicholas Ditzel, Dimitra Zacharaki, Simón Méndez-Ferrer, Moustapha Kassem, Hongzhe Li, Swedish Research Council, Swedish Cancer Foundation, Swedish Childhood Cancer Foundation, Gunnar Nilsson's Cancer Foundation, Gunnel Bjork's Testament, and Skane County Council's Research Foundation
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Receptor, Platelet-Derived Growth Factor alpha ,Population ,CD34 ,Gene Expression ,Biology ,Biochemistry ,Immunophenotyping ,Colony-Forming Units Assay ,Stroma ,Antigens, CD ,Report ,Genetics ,Cluster Analysis ,Humans ,Progenitor cell ,education ,lcsh:QH301-705.5 ,education.field_of_study ,lcsh:R5-920 ,Gene Expression Profiling ,Mesenchymal stem cell ,Mesenchymal Stem Cells ,Cell Biology ,EXPANSION ,Molecular biology ,Haematopoiesis ,Phenotype ,lcsh:Biology (General) ,Cancer research ,Stem cell ,lcsh:Medicine (General) ,Transcriptome ,STEM-CELLS ,Cell and Molecular Biology ,Biomarkers ,Developmental Biology - Abstract
Summary Human bone marrow (BM) contains a rare population of nonhematopoietic mesenchymal stromal cells (MSCs), which are of central importance for the hematopoietic microenvironment. However, the precise phenotypic definition of these cells in adult BM has not yet been reported. In this study, we show that low/negative expression of CD140a (PDGFR-α) on lin−/CD45−/CD271+ BM cells identified a cell population with very high MSC activity, measured as fibroblastic colony-forming unit frequency and typical in vitro and in vivo stroma formation and differentiation capacities. Furthermore, these cells exhibited high levels of genes associated with mesenchymal lineages and HSC supportive function. Moreover, lin−/CD45−/CD271+/CD140alow/− cells effectively mediated the ex vivo expansion of transplantable CD34+ hematopoietic stem cells. Taken together, these data indicate that CD140a is a key negative selection marker for adult human BM-MSCs, which enables to prospectively isolate a close to pure population of candidate human adult stroma stem/progenitor cells with potent hematopoiesis-supporting capacity., Graphical Abstract, Highlights • Comparative gene expression profiling identified MSC markers • Primary adult bone marrow MSCs are CD140 (PDGFR-α) low/negative • CD140alow/− cells have typical in vitro and in vivo MSC properties • Coculture with CD140alow/− cells effectively expanded transplantable CD34+ HSCs, Scheding and colleagues report that low/negative expression of PDGFR-α on lin−/CD45−/CD271+ bone marrow cells identified a cell population with very high CFU-F activity, typical in vitro and in vivo MSC properties, and HSC supportive function. These data indicate that PDGFR-α is a key marker for adult human BM-MSCs, which are critical for the definition of the putative stroma stem cells.
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- 2014
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22. Mathematical modelling of cell-fate decision in response to death receptor engagement
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Andrei Zinovyev, Denis Thieffry, Laurence Calzone, Simon Fourquet, Emmanuel Barillot, Boris Zhivotovsky, Laurent Tournier, Cancer et génome: Bioinformatique, biostatistiques et épidémiologie d'un système complexe, Mines Paris - PSL (École nationale supérieure des mines de Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut Curie [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM), Constraint programming (CONTRAINTES), Inria Paris-Rocquencourt, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria), Technologies avancées pour le génôme et la clinique (TAGC), Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), The Institute of Environmental Medicine [Stockholm] (IMM), Karolinska Institutet [Stockholm], This work is supported by the APO-SYS EU FP7 project. LC, LT, SF, EB and AZ are members of the team 'Systems Biology of Cancer,' Equipe labellisée par la Ligue Nationale Contre le Cancer. The study was also funded by the Projet Incitatif Collaboratif 'Bioinformatics and Biostatistics of Cancer' at Institut Curie. Work in BZ's laboratory is supported by the Swedish and Stockholm Cancer Societies, the Swedish Childhood Cancer Foundation, the Swedish Research Council, the EC-FP-6 (Oncodeath and Chemores) programs. DT acknowledges the support from the Belgian Federal Science Policy Office: IUAP P6/25 (BioMaGNet, Bioinformatics and Modeling: from Genomes to Networks, 2007-2011), European Project: 200767,EC:FP7:HEALTH,FP7-HEALTH-2007-A,APO-SYS(2008), MINES ParisTech - École nationale supérieure des mines de Paris, Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM), Autard, Delphine, and Apoptosis systems biology applied to cancer and AIDS. An integrated approach of experimental biology, data mining, mathematical modelling, biostatistics, systems engineering and molecular medicine - APO-SYS - - EC:FP7:HEALTH2008-02-01 - 2012-01-31 - 200767 - VALID
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Cell type ,QH301-705.5 ,In silico ,Cell ,Apoptosis ,Computational biology ,Biology ,Cell fate determination ,Bioinformatics ,Models, Biological ,Cell Biology/Cell Signaling ,Fas ligand ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,MESH: Computer Simulation ,Genetics ,medicine ,Animals ,Humans ,Computer Simulation ,MESH: Animals ,Biology (General) ,Receptor ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,[INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM] ,030304 developmental biology ,0303 health sciences ,[SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,Computational Biology/Systems Biology ,MESH: Humans ,Ecology ,MESH: Apoptosis ,Wild type ,MESH: Models, Biological ,Receptors, Death Domain ,Cell Biology/Cellular Death and Stress Responses ,Phenotype ,[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,Computational Biology/Signaling Networks ,medicine.anatomical_structure ,Computational Theory and Mathematics ,Modeling and Simulation ,[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM] ,030217 neurology & neurosurgery ,Research Article ,MESH: Receptors, Death Domain - Abstract
Cytokines such as TNF and FASL can trigger death or survival depending on cell lines and cellular conditions. The mechanistic details of how a cell chooses among these cell fates are still unclear. The understanding of these processes is important since they are altered in many diseases, including cancer and AIDS. Using a discrete modelling formalism, we present a mathematical model of cell fate decision recapitulating and integrating the most consistent facts extracted from the literature. This model provides a generic high-level view of the interplays between NFκB pro-survival pathway, RIP1-dependent necrosis, and the apoptosis pathway in response to death receptor-mediated signals. Wild type simulations demonstrate robust segregation of cellular responses to receptor engagement. Model simulations recapitulate documented phenotypes of protein knockdowns and enable the prediction of the effects of novel knockdowns. In silico experiments simulate the outcomes following ligand removal at different stages, and suggest experimental approaches to further validate and specialise the model for particular cell types. We also propose a reduced conceptual model implementing the logic of the decision process. This analysis gives specific predictions regarding cross-talks between the three pathways, as well as the transient role of RIP1 protein in necrosis, and confirms the phenotypes of novel perturbations. Our wild type and mutant simulations provide novel insights to restore apoptosis in defective cells. The model analysis expands our understanding of how cell fate decision is made. Moreover, our current model can be used to assess contradictory or controversial data from the literature. Ultimately, it constitutes a valuable reasoning tool to delineate novel experiments., Author Summary Activation of death receptors (TNFR and Fas) can trigger either survival or cell death according to the cell type and the cellular conditions. In other words, the same signal can have antagonist responses. On one hand, the cell can survive by activating the NFκB signalling pathway. On the other hand, it can die by apoptosis or necrosis. Apoptosis is a suicide mechanism, i.e., an orchestrated way to disrupt cellular components and pack them into specialized vesicles that can be easily removed from the environment, whereas necrosis is a type of death that involves release of intracellular components in the surrounding tissues, possibly causing inflammatory response and severe injury. We, biologists and theoreticians, have recapitulated and integrated known biological data from the literature into an influence diagram describing the molecular events leading to each possible outcome. The diagram has been translated into a dynamical Boolean model. Simulations of wild type, mutant cells and drug treatments qualitatively match current data, and predict several novel mutant phenotypes, along with general characteristics of the cell fate decision mechanism: transient activation of some key proteins in necrosis, mutual inhibitory cross-talks between the three pathways. Our model can further be used to assess contradictory data and address specific biological questions through in silico experiments.
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- 2010
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23. Discovery of microvascular miRNAs using public gene expression data: miR-145 is expressed in pericytes and is a regulator of Fli1
- Author
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Irmeli Barkefors, Bernhard Schermer, Peder Fredlund Fuchs, Guillem Genové, Johan Kreuger, Christine Kurschat, Erik Larsson, Per Lindahl, Cecilia Bondjers, Scott J. Harvey, Christelle Arrondel, Johan Heldin, Pär Gerwins, Thomas Benzing, Wallenberg Laboratory for Cardiovascular Research, Sahlgrenska University Hospital [Gothenburg], Institute of Biomedicine, University of Gothenburg (GU), Department of Medical Biochemistry and Microbiology, Uppsala University, Department of Medical Biochemistry and Biophysics, Karolinska Institutet [Stockholm], Neuropathies héréditaires et rein en développement, Institut National de la Santé et de la Recherche Médicale (INSERM), Equipe Avenir Tour Lavoisier, Université Paris Descartes - Paris 5 (UPD5)-CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Department of Medicine and Centre for Molecular Medicine, University of Cologne, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, PL was supported by the Swedish Research Council, Polysackaridforskning AB, the Swedish Cancer Foundation, the University of Gothenburg, and by Lymphangiogenomics, an Integrated Project funded by the European Commission within its FP6 Program, under the thematic area 'Life sciences, genomics and biotechnology for health' (contract no. LSHG-CT-2004-503573). JK was supported by the Swedish Research Council, the Swedish Cancer Foundation, the Swedish Childhood Cancer Foundation, the Swedish Foundation for Strategic Research and Uppsala University., BMC, Ed., Sahlgrenska University Hospital, University of Gothenburg ( GU ), Institut National de la Santé et de la Recherche Médicale ( INSERM ), and Université Paris Descartes - Paris 5 ( UPD5 ) -CHU Necker - Enfants Malades [AP-HP]
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Angiogenesis ,In situ hybridization ,[SDV.GEN] Life Sciences [q-bio]/Genetics ,Biology ,03 medical and health sciences ,0302 clinical medicine ,[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Gene expression ,microRNA ,Genetics ,medicine ,Molecular Biology ,Genetics (clinical) ,030304 developmental biology ,0303 health sciences ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,PDGFB ,ETS transcription factor family ,Research ,Molecular biology ,Cell biology ,medicine.anatomical_structure ,[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,030220 oncology & carcinogenesis ,FLI1 ,Molecular Medicine ,[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Pericyte ,[ SDV.GEN ] Life Sciences [q-bio]/Genetics - Abstract
International audience; BACKGROUND: A function for the microRNA (miRNA) pathway in vascular development and angiogenesis has been firmly established. miRNAs with selective expression in the vasculature are attractive as possible targets in miRNA-based therapies. However, little is known about the expression of miRNAs in microvessels in vivo. Here, we identified candidate microvascular-selective miRNAs by screening public miRNA expression datasets. METHODS: Bioinformatics predictions of microvascular-selective expression were validated with real-time quantitative reverse transcription PCR on purified microvascular fragments from mouse. Pericyte expression was shown with in situ hybridization on tissue sections. Target sites were identified with 3' UTR luciferase assays, and migration was tested in a microfluid chemotaxis chamber. RESULTS: miR-145, miR-126, miR-24, and miR-23a were selectively expressed in microvascular fragments isolated from a range of tissues. In situ hybridization and analysis of Pdgfb retention motif mutant mice demonstrated predominant expression of miR-145 in pericytes. We identified the Ets transcription factor Friend leukemia virus integration 1 (Fli1) as a miR-145 target, and showed that elevated levels of miR-145 reduced migration of microvascular cells in response to growth factor gradients in vitro. CONCLUSIONS: miR-126, miR-24 and miR-23a are selectively expressed in microvascular endothelial cells in vivo, whereas miR-145 is expressed in pericytes. miR-145 targets the hematopoietic transcription factor Fli1 and blocks migration in response to growth factor gradients. Our findings have implications for vascular disease and provide necessary information for future drug design against miRNAs with selective expression in the microvasculature.
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- 2009
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24. Self-Renewing Human Bone Marrow Mesenspheres Promote Hematopoietic Stem Cell Expansion
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Juan Antonio López, Pedro Marín, Simón Méndez-Ferrer, Ana M Martín, Abel Sanchez-Aguilera, Willem E. Fibbe, Alvaro Urbano-Ispizua, Joan Isern, Roshanak Ghazanfari, Jesús Vázquez, Stefan Scheding, Beatriz Martín-Antonio, Raquel del Toro, María Suárez-Lledó, Melissa van Pel, Lorena Arranz, Daniel Martín-Pérez, Universitat de Barcelona, Centro Nacional de Investigaciones Cardiovasculares Carlos III (España), Ministerio de Economía y Competitividad (España), Unión Europea. Comisión Europea, Instituto de Salud Carlos III, Regional Government of Andalusia (España), Swedish Research Council, Swedish Childhood Cancer Foundation, Comunidad de Madrid (España), Ministerio de Educación (España), European Hematology Association, Howard Hughes Medical Institute, and Swedish Cancer Foundation
- Subjects
CD31 ,Stromal cell ,Human bone ,Bone Marrow Cells ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Nestin ,03 medical and health sciences ,Mice ,0302 clinical medicine ,stomatognathic system ,Antigens, CD ,Mice, Inbred NOD ,Hematopoesi ,Cell diferentiation ,medicine ,Animals ,Humans ,Cell Lineage ,Bone marrow ,Progenitor cell ,lcsh:QH301-705.5 ,Cells, Cultured ,030304 developmental biology ,0303 health sciences ,Mesenchymal Stromal Cells ,Mesenchymal stem cell ,Hematopoietic stem cell ,Mesenchymal Stem Cells ,Cell Differentiation ,hemic and immune systems ,Cell Biology ,Fetal Blood ,Hematopoietic Stem Cells ,Coculture Techniques ,Cell biology ,Hematopoiesis ,Haematopoiesis ,medicine.anatomical_structure ,lcsh:Biology (General) ,030220 oncology & carcinogenesis ,Medul·la òssia ,Immunology ,Diferenciació cel·lular ,Stem cell - Abstract
Strategies for expanding hematopoietic stem cells (HSCs) include coculture with cells that recapitulate their natural microenvironment, such as bone marrow stromal stem/progenitor cells (BMSCs). Plastic-adherent BMSCs may be insufficient to preserve primitive HSCs. Here, we describe a method of isolating and culturing human BMSCs as nonadherent mesenchymal spheres. Human mesenspheres were derived from CD45(-) CD31(-) CD71(-) CD146(+) CD105(+) nestin(+) cells but could also be simply grown from fetal and adult BM CD45(-)-enriched cells. Human mesenspheres robustly differentiated into mesenchymal lineages. In culture conditions where they displayed a relatively undifferentiated phenotype, with decreased adherence to plastic and increased self-renewal, they promoted enhanced expansion of cord blood CD34(+) cells through secreted soluble factors. Expanded HSCs were serially transplantable in immunodeficient mice and significantly increased long-term human hematopoietic engraftment. These results pave the way for culture techniques that preserve the self-renewal of human BMSCs and their ability to support functional HSCs.
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