346 results on '"Susanne S. Renner"'
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2. Population-genomic analyses reveal bottlenecks and asymmetric introgression from Persian into iron walnut during domestication
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Ya-Mei Ding, Yu Cao, Wei-Ping Zhang, Jun Chen, Jie Liu, Pan Li, Susanne S. Renner, Da-Yong Zhang, and Wei-Ning Bai
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Domestication bottleneck ,Introgression ,Iron walnut ,Persian walnut ,Shell-thickness gene ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
Abstract Background Persian walnut, Juglans regia, occurs naturally from Greece to western China, while its closest relative, the iron walnut, Juglans sigillata, is endemic in southwest China; both species are cultivated for their nuts and wood. Here, we infer their demographic histories and the time and direction of possible hybridization and introgression between them. Results We use whole-genome resequencing data, different population-genetic approaches (PSMC and GONE), and isolation-with-migration models (IMa3) on individuals from Europe, Iran, Kazakhstan, Pakistan, and China. IMa3 analyses indicate that the two species diverged from each other by 0.85 million years ago, with unidirectional gene flow from eastern J. regia and its ancestor into J. sigillata, including the shell-thickness gene. Within J. regia, a western group, located from Europe to Iran, and an eastern group with individuals from northern China, experienced dramatically declining population sizes about 80 generations ago (roughly 2400 to 4000 years), followed by an expansion at about 40 generations, while J. sigillata had a constant population size from about 100 to 20 generations ago, followed by a rapid decline. Conclusions Both J. regia and J. sigillata appear to have suffered sudden population declines during their domestication, suggesting that the bottleneck scenario of plant domestication may well apply in at least some perennial crop species. Introgression from introduced J. regia appears to have played a role in the domestication of J. sigillata.
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- 2022
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3. Genome‐wide transcriptome signatures of ant‐farmed Squamellaria epiphytes reveal key functions in a unique symbiosis
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Yuanshu Pu, Alivereti Naikatini, Oscar Alejandro Pérez‐Escobar, Martina Silber, Susanne S. Renner, and Guillaume Chomicki
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ant agriculture ,de novo transcriptomics ,mutualism ,Squamellaria ,symbiosis ,Ecology ,QH540-549.5 - Abstract
Abstract Farming of fungi by ants, termites, or beetles has led to ecologically successful societies fueled by industrial‐scale food production. Another type of obligate insect agriculture in Fiji involves the symbiosis between the ant Philidris nagasau and epiphytes in the genus Squamellaria (Rubiaceae) that the ants fertilize, defend, harvest, and depend on for nesting. All farmed Squamellaria form tubers (domatia) with preformed entrance holes and complex cavity networks occupied by P. nagasau. The inner surface of the domatia consists of smooth‐surfaced walls where the ants nest and rear their brood, and warty‐surfaced walls where they fertilize their crop by defecation. Here, we use RNA sequencing to identify gene expression patterns associated with the smooth versus warty wall types. Since wall differentiation occurred in the most recent common ancestor of all farmed species of Squamellaria, our study also identifies genetic pathways co‐opted following the emergence of agriculture. Warty‐surfaced walls show many upregulated genes linked to auxin transport, root development, and nitrogen transport consistent with their root‐like function; their defense‐related genes are also upregulated, probably to protect these permeable areas from pathogen entry. In smooth‐surfaced walls, genes functioning in suberin and wax biosynthesis are upregulated, contributing to the formation of an impermeable ant‐nesting area in the domatium. This study throws light on a number of functional characteristics of plant farming by ants and illustrates the power of genomic studies of symbiosis.
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- 2021
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4. Three‐dimensional X‐ray‐computed tomography of 3300‐ to 6000‐year‐old Citrullus seeds from Libya and Egypt compared to extant seeds throws doubts on species assignments
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Katherine A. Wolcott, Guillaume Chomicki, Yannick M. Staedler, Krystyna Wasylikowa, Mark Nesbitt, Jürg Schönenberger, and Susanne S. Renner
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Citrullus ,colocynth ,Egyptian tombs ,micro‐CT scanning ,seed shape ,watermelons ,Environmental sciences ,GE1-350 ,Botany ,QK1-989 - Abstract
Societal Impact Statement The watermelon (Citrullus lanatus subsp. vulgaris) is among the world's most important fruit crops. We here use C‐14 dating and morphometric analysis to test whether ancient seeds can be identified to species level, which would help document food expansion, innovation, and diversity in Northeastern Africa. We dated a Libyan seed to 6182–6001 calibrated years BP, making it the oldest Citrullus seed known. Morphometric analysis could not reliably assign ancient seeds to particular species, but several seeds showed breakage patterns characteristic of modern watermelon seeds cracked by human teeth. Our study contributes to the understanding of the early history of watermelon use by humans, who may have mostly snacked on the seeds, and cautions against the use of morphology alone to identify Citrullus archaeological samples.
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- 2021
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5. Foraging distances in six species of solitary bees with body lengths of 6 to 15 mm, inferred from individual tagging, suggest 150 m-rule-of-thumb for flower strip distances
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Michaela M. Hofmann, Andreas Fleischmann, and Susanne S. Renner
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Zoology ,QL1-991 - Abstract
Bees require suitably close foraging and nesting sites to minimize travel time and energy expenditure for brood provisioning. Knowing foraging distances in persistent (‘healthy’) populations is therefore crucial for assessing harmful levels of habitat fragmentation. For small bees, such distances are poorly known because of the difficulty of individual tagging and problems with mark-recapture approaches. Using apiarist’s number tags and colour codes, we marked 2689 males and females of four oligolectic and two polylectic species of Osmiini bees (Megachilidae, genera Chelostoma, Heriades, Hoplitis, Osmia) with body lengths of 6 to 15 mm. The work was carried out in 21 ha-large urban garden that harbours at least 106 species of wild bees. Based on 450 re-sightings, mean female flight distances ranged from 73 to 121 m and male distances from 59 to 100 m. These foraging distances suggest that as a rule of thumb, flower strips and nesting sites for supporting small solitary bees should be no further than 150 m apart.
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- 2020
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6. One-year-old flower strips already support a quarter of a city’s bee species
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Michaela M. Hofmann and Susanne S. Renner
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Zoology ,QL1-991 - Abstract
To combat the loss of flower-rich meadows, many cities are supporting greening measures, including the creation of flower strips. To assess the effectiveness of these measures in supporting flower-visiting insects, their faunas need to be compared to the background fauna at various distances from the flower strips. To meet this goal, we quantified the bee faunas of nine 1000 m2-large and newly established flower strips in the city of Munich, all planted with a regional seed mix, and compared them to the fauna recorded between 1997 and 2017 within 500, 1000, and 1500 m from the respective strip. The 68 species recorded during the flower strips’ first season represent 21% of the 324 species recorded for Munich since 1795 and 29% of the 232 species recorded between 1997 and 2017. Non-threatened species are statistically over-represented in the strips, but pollen generalists are not. These findings illustrate the conservation value of urban flower strips for common species that apparently quickly discover this food source. To our knowledge, this is the first quantitative assessment of the speed and distance over which urban flower strips attract wild bees.
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- 2020
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7. Squamellaria: Plants domesticated by ants
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Guillaume Chomicki, Chris J. Thorogood, Alivereti Naikatini, and Susanne S. Renner
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ant/plant interactions ,insect agriculture ,mutualism ,Squamellaria ,symbiosis ,Environmental sciences ,GE1-350 ,Botany ,QK1-989 - Published
- 2019
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8. Courtship behaviour in the genus Nomada – antennal grabbing and possible transfer of male secretions
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Matthias Schindler, Michaela M. Hofmann, Dieter Wittmann, and Susanne S. Renner
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Zoology ,QL1-991 - Abstract
Due to low population densities, copulation in the cuckoo bee genus Nomada has not previously been observed, although a seminal paper by Tengö and Bergström (1977) on the chemomimesis between these parasitic bees and their Andrena or Melitta hosts postulated that secretions from male glands might be sprayed onto females during copulation. Our observations on the initiation and insertion phase of copulation in three species of Nomada now indicate antennal grabbing as a mechanism by which chemicals are transferred between the sexes. Histological studies of the antennae of N. fucata and N. lathburiana reveal antennal modifications associated with cell aggregations that represent glandular cells, and SEM studies revealed numerous excretory canals.
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- 2018
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9. A valid name for the Xishuangbanna gourd, a cucumber with carotene-rich fruits
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Susanne S. Renner
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Botany ,QK1-989 - Abstract
Herbarium specimens deposited in publicly accessible collections are the basis for all scientific names because only permanent specimens can be re-studied by independent researchers, the very essence of science. Re-investigations may be done with morphological, chemical, genomic, computer-tomographic, or other methods. Based on new herbarium material, I here provide a name for the Xishuangbanna gourd, a plant long cultivated in Yunnan because of its large non-bitter fruits, rich in β-carotene. Genome re-sequencing of numerous accessions has shown that this cucumber mutant is closer to Cucumis sativus var. sativus than is the wild bitter-fruited progenitor C. sativus var. hardwickii, and two dozen studies have further clarified the genetics of key traits, including pulp color, fruit shape, and flowering times. Morphological and molecular diagnoses of the new variety are provided and museum-quality specimens have been distributed to the World’s major herbaria.
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- 2017
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10. A Nuclear Ribosomal DNA Phylogeny of Acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analysis of 606 Sequences
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Guido W. Grimm, Susanne S. Renner, Alexandros Stamatakis, and Vera Hemleben
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Bipartition networks ,large-scale maximum likelihood analyses ,neighbor-nets ,RAxML ,ribosomal DNA ,ITS sequence motifs ,Evolution ,QH359-425 - Abstract
The multi-copy internal transcribed spacer (ITS) region of nuclear ribosomal DNA is widely used to infer phylogenetic relationships among closely related taxa. Here we use maximum likelihood (ML) and splits graph analyses to extract phylogenetic information from ~ 600 mostly cloned ITS sequences, representing 81 species and subspecies of Acer, and both species of its sister Dipteronia. Additional analyses compared sequence motifs in Acer and several hundred Anacardiaceae, Burseraceae, Meliaceae, Rutaceae, and Sapindaceae ITS sequences in GenBank. We also assessed the effects of using smaller data sets of consensus sequences with ambiguity coding (accounting for within-species variation) instead of the full (partly redundant) original sequences. Neighbor-nets and bipartition networks were used to visualize conflict among character state patterns. Species clusters observed in the trees and networks largely agree with morphology-based classifications; of de Jong’s (1994) 16 sections, nine are supported in neighbor-net and bipartition networks, and ten by sequence motifs and the ML tree; of his 19 series, 14 are supported in networks, motifs, and the ML tree. Most nodes had higher bootstrap support with matrices of 105 or 40 consensus sequences than with the original matrix. Within-taxon ITS divergence did not differ between diploid and polyploid Acer, and there was little evidence of differentiated parental ITS haplotypes, suggesting that concerted evolution in Acer acts rapidly.
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- 2006
11. A Nuclear Ribosomal DNA Phylogeny of Inferred with Maximum Likelihood, Splits Graphs, and Motif Analysis of 606 Sequences
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Guido W. Grimm, Susanne S. Renner, Alexandros Stamatakis, and Vera Hemleben
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Evolution ,QH359-425 - Abstract
The multi-copy internal transcribed spacer (ITS) region of nuclear ribosomal DNA is widely used to infer phylogenetic relationships among closely related taxa. Here we use maximum likelihood (ML) and splits graph analyses to extract phylogenetic information from ~ 600 mostly cloned ITS sequences, representing 81 species and subspecies of Acer , and both species of its sister Dipteronia . Additional analyses compared sequence motifs in Acer and several hundred Ana-cardiaceae, Burseraceae, Meliaceae, Rutaceae, and Sapindaceae ITS sequences in GenBank. We also assessed the effects of using smaller data sets of consensus sequences with ambiguity coding (accounting for within-species variation) instead of the full (partly redundant) original sequences. Neighbor-nets and bipartition networks were used to visualize conflict among character state patterns. Species clusters observed in the trees and networks largely agree with morphology-based classifications; of de Jong's (1994) 16 sections, nine are supported in neighbor-net and bipartition networks, and ten by sequence motifs and the ML tree; of his 19 series, 14 are supported in networks, motifs, and the ML tree. Most nodes had higher bootstrap support with matrices of 105 or 40 consensus sequences than with the original matrix. Within-taxon ITS divergence did not differ between diploid and polyploid Acer , and there was little evidence of differentiated parental ITS haplotypes, suggesting that concerted evolution in Acer acts rapidly.
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- 2006
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12. CuGenDBv2: an updated database for cucurbit genomics.
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Jingyin Yu, Shan Wu, Honghe Sun, Xin Wang, Xuemei Tang, Shaogui Guo, Zhonghua Zhang, Sanwen Huang, Yong Xu, Yiqun Weng, Michael Mazourek, Cecilia McGregor, Susanne S. Renner, Sandra Branham, Chandrasekar Kousik, W. Patrick Wechter, Amnon Levi, Rebecca Grumet, Yi Zheng, and Zhangjun Fei
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- 2023
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13. Reproductive biology of Bellucia (MELASTOMATACEAE)
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Susanne S. Renner
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Science (General) ,Q1-390 - Abstract
The reproductive biology of five of the seven species of Bellucia (Melastomataceae), a genus of shrubs and small trees, was investigated in Amazonia. Sucessful fruit-set by Bellucia requires floral visitation by bees. The flowers are produced continuously all year, and are visited by a wide variety of female bees, the principal pollinators being Xylocopa, Centris, Ptilotopus, Epicharis, Eulaema, Bombus, and Oxaea. The floral attractants are color and the odor produced by the pollen, stamens, and petals; the reqard is pollen. Three species of Bellucia are self-incompatible. Indiscriminate visitor behavior and lack of phenological, morphological, or genetic barriers lead to hybridization between sympatric species of Bellucia, and no more than two species occupy the same habitat at anu one locality. Bellucia produces berries with numerous small seeds, and is dispersed by birds, bats, monkeys, tapirs, turtles, and ants. Seedling establisment requires full sunlight, and occurs on a variety of soil types. The reproductive strategy is interpreted as that of a pioneer species.
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- 1986
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14. Sex-chrom v. 2.0: a database of green plant species with sex chromosomes
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Sònia Garcia, Bohuslav Janousek, Joan Pere Pascual-Díaz, Susanne S. Renner, and Ministerio de Ciencia e Innovación (España)
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Genetics ,Genetics (clinical) - Abstract
The work was supported by a grant from the Spanish Ministerio de Ciencia e Innovación, PID2020-119163 GB-I00, and SG benefited from a Ramón y Cajal contract (RYC-2014–16608), both funded by MCIN/AEI/10.13039/501100011033., Introduction Materials and methods Results and discussion Data availability References Acknowledgements Funding Author information Ethics declarations Additional information Rights and permissions About this article
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- 2023
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15. How Sherwin Carlquist turned long-distance dispersal research into a field of empirical and experimental enquiry
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Susanne S. Renner
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Forestry ,Plant Science - Abstract
Summary While Sherwin J. Carlquist (1930–2021) did not originate the concept of long-distance dispersal and its role in evolution — a major pillar in Darwin’s theory (1859) — he almost single-handedly turned research on dispersal to insular habitats into an empirical and experimental research area. This contribution explains how and why this occurred based on Carlquist’s own papers and personal account, and provides a brief assessment of the historical context of his research on long-distance dispersal. I end on a personal note; in 1981, when I was a graduate student, Carlquist participated in a symposium on ‘Dispersal and Distribution’ in Hamburg, and the paper he gave there on intercontinental dispersal greatly influenced my own work.
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- 2022
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16. Vegetation change on Mt. Teide, the Atlantic's highest volcano, inferred by incorporating the data underlying Humboldt's Tableau Physique des Iles Canaries
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Susanne S. Renner, Rüdiger Otto, José Luis Martín‐Esquivel, Manuel V. Marrero‐Gómez, and José María Fernández‐Palacios
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Ecology ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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17. DNA sequences as types: A discussion paper from the Special‐purpose Committee established at the XIX International Botanical Congress in Shenzhen, China
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Kevin R. Thiele, Wendy L. Applequist, Susanne S. Renner, Tom W. May, Ali A. Dönmez, Quentin Groom, Samuli Lehtonen, Christine A. Maggs, Valéry Malécot, and Hwan Su Yoon
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Plant Science ,DNA sequences ,eDNA ,typification ,Ecology, Evolution, Behavior and Systematics - Abstract
A special‐purpose Committee on DNA Sequences as Types was established at the XIX International Botanical Congress (IBC) in Shenzhen, China, in 2017, with a mandate to report to the XX IBC in Madrid in 2024 with recommendations on a preferred course of action with respect to potential amendments of the International Code of Nomenclature for algae, fungi, and plants to allow DNA sequences as types. This is the first in an expected series of papers from the Special‐purpose Committee on this issue. We set out the background to the establishment of the Committee, explore key issues around typification that are pertinent to the question of DNA sequences as types, enumerate pros and cons of allowing DNA sequences as types, and foreshadow options for future discussion and potential recommendations.
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- 2023
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18. The evolution of huge Y chromosomes in
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Bohuslav, Janousek, Roman, Gogela, Vaclav, Bacovsky, and Susanne S, Renner
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Evolution, Molecular ,Cucurbitaceae ,Articles ,Chromosomes, Plant - Abstract
Microscopically dimorphic sex chromosomes in plants are rare, reducing our ability to study them. One difficulty has been the paucity of cultivatable species pairs for cytogenetic, genomic and experimental work. Here, we study the newly recognized sisters Coccinia grandis and Coccinia schimperi, both with large Y chromosomes as we here show for Co. schimperi. We built genetic maps for male and female Co. grandis using a full-sibling family, inferred gene sex-linkage, and, with Co. schimperi transcriptome data, tested whether X- and Y-alleles group by species or by sex. Most sex-linked genes for which we could include outgroups grouped the X- and Y-alleles by species, but some 10% instead grouped the two species' X-alleles. There was no relationship between XY synonymous-site divergences in these genes and gene position on the non-recombining part of the X, suggesting recombination arrest shortly before or after species divergence, here dated to about 3.6 Ma. Coccinia grandis and Co. schimperi are the species pair with the most heteromorphic sex chromosomes in vascular plants (the condition in their sister remains unknown), and future work could use them to study mechanisms of Y chromosome enlargement and parallel degeneration, or to test Haldane's rule about lower hybrid fitness in the heterogametic sex. This article is part of the theme issue ‘Sex determination and sex chromosome evolution in land plants’.
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- 2023
19. 'My Reputation is at Stake.' Humboldt's Mountain Plant Geography in the Making (1803–1825)
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Susanne S. Renner, Ulrich Päßler, and Pierre Moret
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History and Philosophy of Science ,General Agricultural and Biological Sciences - Published
- 2023
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20. Trees growing in Eastern North America experience higher autumn solar irradiation than their European relatives, but is nitrogen limitation another factor explaining anthocyanin‐red autumn leaves?
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Susanne S. Renner and Constantin M. Zohner
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Ecology, Evolution, Behavior and Systematics - Published
- 2022
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21. In memoriam Klaus Kubitzki (1933–2022)
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Susanne S. Renner, Hans‐Helmut Poppendieck, Joachim W. Kadereit, and Jens G. Rohwer
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Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2023
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22. Author response: Touch-sensitive stamens enhance pollen dispersal by scaring away visitors
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Deng-Fei Li, Wen-Long Han, Susanne S Renner, and Shuang-Quan Huang
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- 2022
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23. Genome sequencing of up to 6,000-Year-Old Citrullus seeds reveals use of a bitter-fleshed species prior to watermelon domestication
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Oscar A Pérez-Escobar, Sergio Tusso, Natalia A S Przelomska, Shan Wu, Philippa Ryan, Mark Nesbitt, Martina V Silber, Michaela Preick, Zhangjun Fei, Michael Hofreiter, Guillaume Chomicki, Susanne S Renner, and Purugganan, M
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Citrullus ,Domestication ,Seeds ,Genetics ,Chromosome Mapping ,Genomics ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
Iconographic evidence from Egypt suggests that watermelon pulp was consumed there as a dessert by 4,360 BP. Earlier archaeobotanical evidence comes from seeds from Neolithic settlements in Libya, but whether these were watermelons with sweet pulp or other forms is unknown. We generated genome sequences from 6,000- and 3,300-year-old seeds from Libya and Sudan, and from worldwide herbarium collections made between 1824 and 2019, and analyzed these data together with resequenced genomes from important germplasm collections for a total of 131 accessions. Phylogenomic and population-genomic analyses reveal that (1) much of the nuclear genome of both ancient seeds is traceable to West African seed-use “egusi-type” watermelon (Citrullus mucosospermus) rather than domesticated pulp-use watermelon (Citrullus lanatus ssp. vulgaris); (2) the 6,000-year-old watermelon likely had bitter pulp and greenish-white flesh as today found in C. mucosospermus, given alleles in the bitterness regulators ClBT and in the red color marker LYCB; and (3) both ancient genomes showed admixture from C. mucosospermus, C. lanatus ssp. cordophanus, C. lanatus ssp. vulgaris, and even South African Citrullus amarus, and evident introgression between the Libyan seed (UMB-6) and populations of C. lanatus. An unexpected new insight is that Citrullus appears to have initially been collected or cultivated for its seeds, not its flesh, consistent with seed damage patterns induced by human teeth in the oldest Libyan material.
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- 2022
24. How changes in spring and autumn phenology translate into growth‐experimental evidence of asymmetric effects
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Constantin M. Zohner, Thomas W. Crowther, Susanne S. Renner, and Veronica Sebald
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geography ,Plant growth ,geography.geographical_feature_category ,Ecology ,Phenology ,Spring (hydrology) ,Environmental science ,Climate change ,Plant Science ,Ecology, Evolution, Behavior and Systematics ,Carbon cycle - Published
- 2021
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25. Climate data and flowering times for 450 species from 1844 deepen the record of phenological change in southern Germany
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Constantin M. Zohner, Susanne S. Renner, and Markus Wesche
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Anemone ,Arum ,Carl Friedrich Philipp von Martius ,climate change ,climate station Hohenpeißenberg ,flowering phenology ,Climate ,Climate Change ,Arum maculatum ,Flowers ,Plant Science ,Pollinator ,Germany ,Genetics ,Botanical garden ,Ecology, Evolution, Behavior and Systematics ,biology ,Phenology ,Ecology ,Temperature ,biology.organism_classification ,Europe ,Herbarium ,Pulsatilla patens ,Female ,Seasons - Abstract
PREMISE State‐sponsored weather stations became ubiquitous by the 1880s, yet many old climate data and phenological observations still need to be digitized and made accessible. METHODS We here make available flowering times for 450 species of herbs and shrubs gathered in 1844 by Carl Friedrich Philipp von Martius (1794–1868), director of the Munich Botanical Garden. The data formed part of the world’s third‐oldest phenological monitoring network as we explain in a brief overview of the history of such networks. Using data from one of the world’s oldest continuously functioning weather stations, Hohenpeißenberg, we relate temperature to flowering in three species with short flowering times and herbarium collections made since 1844 within the city’s perimeter, namely, Anemone patens, A. pulsatilla, and Arum maculatum. RESULTS Mean advances in flowering dates were 1.3–2.1 days/decade or 3.2–4.2 days/1°C warming. These advances are in keeping with similar advances in other European herbs during more recent periods. CONCLUSIONS Future studies might use the 1844 flowering data made available here as a source of information on the availability of particular flowers for specialized pollinators including insects looking for oviposition sites, such as the Psychoda flies that become trapped in Arum inflorescences. Another use of Martius’s 1844 data would be their incorporation into larger‐scale analyses of flowering in southern‐central Europe., American Journal of Botany, 108 (4), ISSN:1914-2016, ISSN:0002-9122
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- 2021
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26. Plant sex chromosomes defy evolutionary models of expanding recombination suppression and genetic degeneration
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Niels A. Müller and Susanne S. Renner
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0106 biological sciences ,0301 basic medicine ,Gametophyte ,biology ,Dioecy ,Marchantia ,Chromosome ,Plant Science ,biology.organism_classification ,01 natural sciences ,Genome ,Sexual conflict ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,Evolutionary biology ,medicine ,Gamete ,Gene ,010606 plant biology & botany - Abstract
Hundreds of land plant lineages have independently evolved separate sexes in either gametophytes (dioicy) or sporophytes (dioecy), but 43% of all dioecious angiosperms are found in just 34 entirely dioecious clades, suggesting that their mode of sex determination evolved a long time ago. Here, we review recent insights on the molecular mechanisms that underlie the evolutionary change from individuals that each produce male and female gametes to individuals specializing in the production of just one type of gamete. The canonical model of sex chromosome evolution in plants predicts that two sex-determining genes will become linked in a sex-determining region (SDR), followed by expanding recombination suppression, chromosome differentiation and, ultimately, degeneration. Experimental work, however, is showing that single genes function as master regulators in model systems, such as the liverwort Marchantia and the angiosperms Diospyros and Populus. In Populus, this type of regulatory function has been demonstrated by genome editing. In other systems, including Actinidia, Asparagus and Vitis, two coinherited factors appear to independently regulate female and male function, yet sex chromosome differentiation has remained low. We discuss the best-understood systems and evolutionary pathways to dioecy, and present a meta-analysis of the sizes and ages of SDRs. We propose that limited sexual conflict explains why most SDRs are small and sex chromosomes remain homomorphic. It appears that models of increasing recombination suppression with age do not apply because selection favours mechanisms in which sex determination depends on minimal differences, keeping it surgically precise.
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- 2021
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27. High honeybee abundances reduce wild bee abundances on flowers in the city of Munich
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Zoe Hentschel, Helen Krause, Marie Sophie Graf, Susanne S. Renner, and Andreas Fleischmann
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0106 biological sciences ,Beekeeping ,Plant Nectar ,media_common.quotation_subject ,Flowers ,Biology ,010603 evolutionary biology ,01 natural sciences ,Competition (biology) ,Exploitative competition ,Honeybees ,Nectar ,Animals ,Resource consumption ,Cities ,Conservation Ecology–Original Research ,Ecology, Evolution, Behavior and Systematics ,media_common ,Urban bee keeping ,Ecology ,Bees ,Plants ,010602 entomology ,Plant species ,Wild bees - Abstract
The increase in managed honeybees (Apis mellifera) in many European cities has unknown effects on the densities of wild bees through competition. To investigate this, we monitored honeybees and non-honeybees from 01 April to 31 July 2019 and 2020 at 29 species of plants representing diverse taxonomic and floral-functional types in a large urban garden in the city of Munich in which the same plant species were cultivated in both years. No bee hives were present in the focal garden, and all bee hives in the adjacent area were closely monitored by interviewing the relevant bee keepers in both 2019 and 2020. Honeybee numbers were similar in April of both years, but increased from May to July 2020 compared to 2019. The higher densities correlated with a significant increase in shifts from wild bee to honeybee visits in May/June/July, while visitor spectra in April 2019 and 2020 remained the same. Most of the species that experienced a shift to honeybee visits in 2020 were visited mostly or exclusively for their nectar. There were no shifts towards increased wild bee visits in any species. These results from a flower-rich garden have implications for the discussion of whether urban bee keeping might negatively impact wild bees. We found clear support that high honeybee densities result in exploitative competition at numerous types of flowers.
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- 2021
28. Mobile stamens enhance pollen dispersal by scaring floral visitors away
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Deng-Fei Li, Wen-Long Han, Susanne S. Renner, and Shuang-Quan Huang
- Abstract
SummaryAnimal-pollinated plants have to get pollen to a conspecific stigma while protecting it from getting eaten. We provide experimental evidence that touch-sensitive stamens function in (i) enhancing pollen export and (ii) reducing pollen loss to thieves. Stamens of Berberis and Mahonia are inserted between paired nectar glands and when touched by an insect’s tongue rapidly snap forward so that their valvate anthers press pollen on the insect’s tongue or face. We immobilized the stamens in otherwise unmodified flowers and studied pollen transfer in the field and under enclosed conditions. On flowers with immobilized stamens, the commonest bee visitor stayed up to 3.6x longer, yet removed 1.3x fewer pollen grains and deposited 2.1x fewer grains on stigmas per visit. Self-pollen from a single stamen hitting the stigma amounted to 6% of the grains received from single bee visits. Bees discarded pollen passively placed on their bodies, likely because of its berberine content; nectar has no berberine. Syrphid flies fed on both nectar and pollen, taking more when stamens were immobilized. Pollen-tracking experiments in two species showed that mobile-stamen-flowers donate pollen to many more recipients. These results demonstrate another mechanism by which plants simultaneously meter out their pollen and reduce pollen theft.HighlightsStamens that snap forward when triggered by a flower visitor may serve to meter out pollen, scare away pollen thieves, or place pollen more accurately.We tested these hypotheses by experimentally immobilizing all six stamens in numerous flowers of Berberis and Mahonia species in the field and under enclosed conditions.In flowers with immobilized stamens, the commonest bee species stayed up to 3.6x longer, yet removed 1.3x fewer pollen grains and deposited 2.1x fewer grains on stigmas per visit. Mobile stamens exported their pollen to significantly more neighboring flowers.Graphic abstractBehaviour and pollen transfer after flower visitors received a beating on the tongue or in the face by the forward-snapping stamens of Berberis. Stamens only snap forward if their filament basis is touched by an insect tongue.
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- 2022
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29. Touch-sensitive stamens enhance pollen dispersal by scaring away visitors
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Deng-Fei Li, Wen-Long Han, Susanne S Renner, and Shuang-Quan Huang
- Subjects
General Immunology and Microbiology ,Plant Nectar ,Touch ,General Neuroscience ,Animals ,Pollen ,General Medicine ,Flowers ,Bees ,Plants ,Pollination ,General Biochemistry, Genetics and Molecular Biology - Abstract
Animal-pollinated plants have to get pollen to a conspecific stigma while protecting it from getting eaten. Touch-sensitive stamens, which are found in hundreds of flowering plants, are thought to function in enhancing pollen export and reducing its loss, but experimental tests are scarce. Stamens of Berberis and Mahonia are inserted between paired nectar glands and when touched by an insect’s tongue rapidly snap forward so that their valvate anthers press pollen on the insect’s tongue or face. We immobilized the stamens in otherwise unmodified flowers and studied pollen transfer in the field and under enclosed conditions. On flowers with immobilized stamens, the most common bee visitor stayed up to 3.6× longer, yet removed 1.3× fewer pollen grains and deposited 2.1× fewer grains on stigmas per visit. Self-pollen from a single stamen hitting the stigma amounted to 6% of the grains received from single bee visits. Bees discarded pollen passively placed on their bodies, likely because of its berberine content; nectar has no berberine. Syrphid flies fed on both nectar and pollen, taking more when stamens were immobilized. Pollen-tracking experiments in two Berberis species showed that mobile-stamen-flowers donate pollen to many more recipients. These results demonstrate another mechanism by which plants simultaneously meter out their pollen and reduce pollen theft.
- Published
- 2022
30. Centromere organization and UU/V sex chromosome behavior in a liverwort
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Susanne S. Renner, Aretuza Sousa, and Veit Schubert
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Hepatophyta ,0106 biological sciences ,0301 basic medicine ,DNA, Plant ,Centromere ,Population ,Aneuploidy ,Plant Science ,Biology ,01 natural sciences ,Chromosomes, Plant ,Molecular cytogenetics ,03 medical and health sciences ,Meiosis ,Genetics ,medicine ,education ,education.field_of_study ,Autosome ,Chromosome ,Cell Biology ,medicine.disease ,030104 developmental biology ,Sex ratio ,010606 plant biology & botany - Abstract
In 1917, sex chromosomes in plants were discovered in a liverwort with hetermorphic U and V chromosomes. Such heteromorphy is unexpected because, unlike the XY chromosomes in diploid-dominant plants, in haploid-dominant plants the female U and the male V chromosomes experience largely symmetrical potential recombination environments. Here we use molecular cytogenetics and super-resolution microscopy to study Frullania dilatata, a liverwort with one male and two female sex chromosomes. We applied a pipeline to Illumina sequences to detect abundant types of repetitive DNA and developed FISH probes to microscopically distinguish the sex chromosomes. We also determined the phenotypic population sex ratio because biased ratios have been reported from other liverworts with heteromorphic sex chromosomes. Populations had male-biased sex ratios. The sex chromosomes are monocentric, and of 14 probes studied (eight satellites, five transposable elements and one plastid region), four resulted in unique signals that differentiated the sex chromosomes from the autosomes and from each other. One FISH probe selectively marked the centromeres of both U chromosomes, so we could prove that during meiosis each U chromosome associates with one of the opposite telomeres of the V chromosome, resulting in a head-to-head trivalent. The similarity of the two U chromosomes to each other in size and in their centromere FISH signal positions points to their origin via a non-disjunction event (aneuploidy), which would fit with the general picture of sex chromosomes rarely crossing-over and being prone to suffer from non-disjunction.
- Published
- 2021
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31. JOSEF BOGNER (1939–2020)
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Simon Joseph Mayo and Susanne S. Renner
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Plant Science ,Biology ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
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32. Bee species decrease and increase between the 1990s and 2018 in large urban protected sites
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Susanne S. Renner and Michaela M. Hofmann
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0106 biological sciences ,0303 health sciences ,Entomology ,Extinction ,Ecology ,business.industry ,Biodiversity ,Biology ,medicine.disease_cause ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Habitat ,Animal ecology ,Agriculture ,Insect Science ,Pollen ,medicine ,Animal Science and Zoology ,business ,Sociality ,030304 developmental biology ,Nature and Landscape Conservation - Abstract
Previous work has shown that among 428 species of bees occurring in Germany, decline or extinction over the past 40 years have been correlated with late-season emergence and restricted habitats, while other factors, such as pollen specialization, body size, nesting sites, and sociality, played no role in models that included a phylogeny of these bees. Doing best are spring-flying, city-dwelling species. Building on these results, we here investigate changes in bee diversity from the 1990s to 2018 at three protected sites within the city perimeter of Munich, focusing on the correlates of flight season (spring or summer), flight duration (in months), and number of habitats (one or two vs. three to six). Local species pools were assessed against the total species pool from 1795 onwards. Twenty years ago, 150 species were present at one or more of the sites, while in 2017/2018, this was true of 188 species, with the increase at two sites being of similar proportion. In two of the three areas, broad habitat use was positively correlated with persistence. Flight season or duration had no statistical effect. These results underscore the function of urban protected sites in bee conservation and imply that summer food shortages, which negatively affect bees in agricultural areas, play no role in urbanized regions so that late-season flight is not an extinction handicap.
- Published
- 2020
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33. Leaf‐out in northern ecotypes of wide‐ranging trees requires less spring warming, enhancing the risk of spring frost damage at cold range limits
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Constantin M. Zohner, Lidong Mo, Susanne S. Renner, and Veronica Sebald
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0106 biological sciences ,Carpinus betulus ,Global and Planetary Change ,Ecology ,biology ,Ecotype ,Phenology ,010604 marine biology & hydrobiology ,Acer platanoides ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Fagus sylvatica ,Agronomy ,Geographic range limit ,Frost ,Temperate climate ,Ecology, Evolution, Behavior and Systematics - Abstract
AIM: Trees need to avoid frost damage to their young leaves by leafing out after the occurrence of the last frost, yet they also need to start photosynthesis early in the season to achieve sufficient growth. This trade‐off leads to the hypothesis that ‘safety margins’ against spring frost should become shorter, the longer the winter duration, perhaps reaching an asymptotic limit where frost damage would occur in most years. Physiologically, shorter safety margins in high‐latitude ecotypes might be achieved by lower degree‐day requirements for leaf‐out, compared to low‐latitude ecotypes. LOCATION: Europe. TIME PERIOD: 1902–2009. MAJOR TAXA STUDIED: Temperate trees. METHODS: Using herbarium collections of Acer platanoides, Carpinus betulus, Fagus sylvatica and Prunus spinosa made over 108 years at 40° to 60° N latitude, we related historic leaf‐out dates to winter and spring temperatures (chilling and degree‐days), winter duration, and date of last frost occurrence in the relevant years and locations. RESULTS: In all species, frost safety margins decreased towards high‐latitude regions with long winters, with each day increase in winter duration reducing frost safety margins by 0.48 days in Fagus and 0.32–0.21 days in Prunus, Acer and Carpinus. These latitudinal differences correlate with northern ecotypes’ shorter degree‐day requirements for leaf‐out. MAIN CONCLUSIONS: The decline in spring frost safety margins in regions with long winters supports the new hypothesis that species may reach their geographic range limit where they ‘bump up’ against experiencing regular frost injury to their young leaves. Larger datasets are necessary to further corroborate our hypothesis and future efforts should thus be directed toward increasing the latitudinal range of existing phenological databases.
- Published
- 2020
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34. Different from tracheophytes, liverworts commonly have mixed 35S and 5S arrays
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Eva M. Temsch, Julia Bechteler, Aretuza Sousa, and Susanne S. Renner
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Hepatophyta ,Pellia ,Nuclear gene ,biology ,Chromosome ,Original Articles ,Plant Science ,biology.organism_classification ,DNA, Ribosomal ,Genome ,Tracheophyta ,Genome Size ,Phylogenetics ,Evolutionary biology ,Monoicous ,Genome size ,Phylogeny ,Genomic organization - Abstract
Background and Aims Unlike other nuclear genes in eukaryotes, rDNA genes (5S and 35S loci) are present in numerous copies per cell and, when stained, can therefore provide basic information about genome organization. In tracheophytes (vascular plants), they are usually located on separate chromosomes, the so-called S-type organization. An analysis of 1791 species of land plants suggested that S-type arrays might be ancestral in land plants, while linked (L-type) organization may be derived. However, no outgroup and only a handful of ferns and bryophytes were included. Methods We analysed genome sizes and the distribution of telomere, 5S and 35S rDNA FISH signals in up to 12 monoicous or dioicous species of liverworts from throughout a phylogeny that includes 287 of the 386 currently recognized genera. We also used the phylogeny to plot chromosome numbers and the occurrence of visibly distinct sex chromosomes. Key Results Chromosome numbers are newly reported for the monoicous Lejeunea cavifolia and for females of the dioicous Scapania aequiloba. We detected sex-related differences in the number of rDNA signals in the dioicous Plagiochila asplenioides and Frullania dilatata. In the latter, the presence of two UU chromosomes in females and additional 5S-35S rDNA loci result in a haploid genome 0.2082 pg larger than the male genome; sex-specific genome differences in the other dioicous species were small. Four species have S-type rDNA, while five species have mixed L-S rDNA organization, and transitions may have occurred multiple times, as suggested by rDNA loci not being conserved among closely related species of Pellia. All species shared an Arabidopsis-like telomere motif, and its detection allowed verification of the chromosome number of Radula complanata and chromosome rearrangements in Aneura pinguis and P. asplenioides, the latter also showing sex-specific interstitial telomere repeats. Conclusions The S and L rDNA arrangements appear to have evolved repeatedly within liverworts, even in the same species. Evidence for differential accumulation of rDNA between the sexes so far is limited.
- Published
- 2020
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35. Tradeoffs in the evolution of plant farming by ants
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E. Toby Kiers, Susanne S. Renner, Gudrun Kadereit, Guillaume Chomicki, and Animal Ecology
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Nitrogen ,Rubiaceae ,ants ,Biology ,Predation ,Crop ,Commentaries ,Animals ,Herbivory ,Symbiosis ,SDG 2 - Zero Hunger ,insect agriculture ,Mutualism (biology) ,Herbivore ,Multidisciplinary ,Obligate ,Agroforestry ,business.industry ,plants ,Crop yield ,fungi ,food and beverages ,Agriculture ,symbioses ,Biological Evolution ,Crop protection ,business ,ant-plant interactions - Abstract
Diverse forms of cultivation have evolved across the tree of life. Efficient farming requires that the farmer deciphers and actively promotes conditions that increase crop yield. For plant cultivation, this can include evaluating tradeoffs among light, nutrients, and protection against herbivores. It is not understood if, or how, nonhuman farmers evaluate local conditions to increase payoffs. Here, we address this question using an obligate farming mutualism between the ant Philidris nagasau and epiphytic plants in the genus Squamellaria that are cultivated for their nesting sites and floral rewards. We focused on the ants' active fertilization of their crops and their protection against herbivory. We found that ants benefited from cultivating plants in full sun, receiving 7.5-fold more floral food rewards compared to shade-cultivated plants. The higher reward levels correlated with higher levels of crop protection provided by the ants. However, while high-light planting yielded the greatest immediate food rewards, sun-grown crops contained less nitrogen compared to shade-grown crops. This was due to lower nitrogen input from ants feeding on floral rewards instead of insect protein gained from predation. Despite this tradeoff, farming ants optimize crop yield by selectively planting their crops in full sun. Ancestral state reconstructions across this ant-plant clade show that a full-sun farming strategy has existed for millions of years, suggesting that nonhuman farmers have evolved the means to evaluate and balance conflicting crop needs to their own benefit.
- Published
- 2020
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36. Early evolution of Coriariaceae (Cucurbitales) in light of a new early Campanian (ca. 82 Mya) pollen record from Antarctica
- Author
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Viviana Barreda, Tanja M. Schuster, María Cristina Tellería, Susanne S. Renner, and Luis Palazzesi
- Subjects
0106 biological sciences ,0301 basic medicine ,biology ,Range (biology) ,Biogeography ,Plant Science ,biology.organism_classification ,medicine.disease_cause ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Genus ,Coriaria ,Pollen ,Botany ,Cucurbitales ,medicine ,Clade ,Southern Hemisphere ,Ecology, Evolution, Behavior and Systematics - Abstract
Coriariaceae comprise only Coriaria , a genus of shrubs with nine species in Australasia (but excluding Australia), five in the Himalayas, Taiwan, the Philippines, and Japan, one in the Mediterranean, and one ranging from Patagonia to Mexico. The sister family, Corynocarpaceae, comprises five species of evergreen trees from New Guinea to New Zealand and Australia. This distribution has long fascinated biogeographers as potential support for Wegener's theory of continental drift, with alternative scenarios invoking either Antarctic or Beringian range expansions. Here, we present the discovery of pollen grains from Early Campanian (ca. 82 Mya) deposits in Antarctica, which we describe as Coriaripites goodii sp. nov., and newly generated nuclear and plastid molecular data for most of the family's species and its outgroup. This greatly expands the family's fossil record and is the so far oldest fossil of the order Cucurbitales. We used the phylogeny, new fossil, and an Oligocene flowering branch assigned to a small subclade of Coriaria to generate a chronogram and to study changes in chromosome number, deciduousness, and andromonoecy. Coriaria comprises a Northern (NH) and a Southern Hemisphere (SH) clade that diverged from each other in the Paleocene (ca. 57 Mya), with the SH clade reaching the New World once, through Antarctica, as supported by the fossil pollen. While the SH clade retained perfect flowers and evergreen leaves, the NH clade evolved andromonoecy and deciduousness. Polyploidy occurs in both clades and points to hybridization, matching weak species boundaries throughout the genus.
- Published
- 2020
- Full Text
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37. Towards a new autumn phenology model integrating seasonal productivity, climate, and day length
- Author
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Constantin M. Zohner, Leila Mirzagholi, Raymo Bucher, Susanne S. Renner, Lidong Mo, Daniel Palouš, Yann Vitasse, and Thomas W. Crowther
- Abstract
Predicting the timing of autumn leaf senescence in northern trees remains challenging because the seasonal interplay in the effects of day length, climate, and plant productivity is not well understood. This severely limits our ability to forecast vegetation activity and carbon uptake in temperate and boreal ecosystems. Here we present a new framework for predicting autumn senescence dates based on the idea that day length mediates the effects of climate on autumn phenology, with early-season (pre-solstice) growth and late-season temperatures constituting antagonistic forces. To test these predictions, we used a combination of satellite-derived vegetation productivity across Northern Hemisphere forests, ground-sourced European phenology observations of four widespread tree species, and a climate-manipulation experiment on European beech. Our results reveal important constraints on the late-season carbon uptake potential of northern trees, improving our understanding of vegetation dynamics in response to climate change.
- Published
- 2022
- Full Text
- View/download PDF
38. Sex determination and sex chromosome evolution in land plants
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Susanne S. Renner and Niels A. Müller
- Subjects
Sex Chromosomes ,Reproduction ,Animals ,Embryophyta ,Plants ,General Agricultural and Biological Sciences ,General Biochemistry, Genetics and Molecular Biology - Abstract
Linnaeus's very first opus, written when he was 22 years old, dealt with the analogy that exists between plants and animals in how they ‘propagate their species’, and a revised version with a plate depicting the union of male and female Mercurialis annua plants became a foundational text on the sexuality of plants. The question how systems with separate males and females have evolved in sedentary organisms that appear ancestrally bisexual has fascinated biologists ever since. The phenomenon, termed dioecy, has important consequences for plant reproductive success and is of commercial interest since it affects seed quality and fruit production. This theme issue presents a series of articles that synthesize and challenge the current understanding of how plants achieve dioecy. The articles deal with a broad set of taxa, including Coccinia , Ginkgo , Mercurialis , Populus , Rumex and Silene , as well as overarching topics, such as the field's terminology, analogies with animal sex determination systems, evolutionary pathways to dioecy, dosage compensation, and the longevity of the two sexes. In this introduction, we focus on four topics, each addressed by several articles from different angles and with different conclusions. Our highlighting of unclear or controversial issues may help future studies to build on the current understanding and to ask new questions that will expand our knowledge of plant sexual systems. This article is part of the theme issue ‘Sex determination and sex chromosome evolution in land plants’.
- Published
- 2022
39. The evolution of huge Y chromosomes inCoccinia grandisand its sister,Coccinia schimperi
- Author
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Bohuslav Janousek, Roman Gogela, Vaclav Bacovsky, and Susanne S. Renner
- Subjects
General Agricultural and Biological Sciences ,General Biochemistry, Genetics and Molecular Biology - Abstract
Microscopically dimorphic sex chromosomes in plants are rare, reducing our ability to study them. One difficulty has been the paucity of cultivatable species pairs for cytogenetic, genomic and experimental work. Here, we study the newly recognized sistersCoccinia grandisandCoccinia schimperi, both with large Y chromosomes as we here show forCo. schimperi. We built genetic maps for male and femaleCo. grandisusing a full-sibling family, inferred gene sex-linkage, and, withCo. schimperitranscriptome data, tested whether X- and Y-alleles group by species or by sex. Most sex-linked genes for which we could include outgroups grouped the X- and Y-alleles by species, but some 10% instead grouped the two species' X-alleles. There was no relationship between XY synonymous-site divergences in these genes and gene position on the non-recombining part of the X, suggesting recombination arrest shortly before or after species divergence, here dated to about 3.6 Ma.Coccinia grandisandCo. schimperiare the species pair with the most heteromorphic sex chromosomes in vascular plants (the condition in their sister remains unknown), and future work could use them to study mechanisms of Y chromosome enlargement and parallel degeneration, or to test Haldane's rule about lower hybrid fitness in the heterogametic sex.This article is part of the theme issue ‘Sex determination and sex chromosome evolution in land plants’.
- Published
- 2022
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40. In memoriam Charles Jeffrey (1934–2022)
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Susanne S. Renner and D.J. Nicholas Hind
- Subjects
Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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41. Plant Evolution and Systematics 1982–2022: Changing Questions and Methods as Seen by a Participant
- Author
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Susanne S. Renner
- Published
- 2022
- Full Text
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42. The Subfamily Kibessioideae, its Tribe Pternandreae, and its Sole Genus, Pternandra
- Author
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Susanne S. Renner
- Published
- 2022
- Full Text
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43. Concatenator, a user-friendly program to concatenate DNA sequences, implementing graphical user interfaces for MAFFT and FastTree
- Author
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Miguel Vences, Stefanos Patmanidis, Vladimir Kharchev, and Susanne S Renner
- Subjects
General Medicine - Abstract
Motivation Phylogenetic and phylogenomic analyses require multi-gene input files in different formats, but there are few user-friendly programs facilitating the workflow of combining, concatenating or separating, aligning and exploring multi-gene datasets. Results We present Concatenator, a user-friendly GUI-driven program that accepts single-marker and multi-marker DNA sequences in different input formats, including Fasta, Phylip and Nexus, and that outputs concatenated sequences as single-marker or multi-marker Fasta, interleaved nexus or Phylip files, including command files for downstream model selection in IQ-TREE. It includes the option to (re)align markers with MAFFT and produces exploratory trees with FastTree. Although tailored for medium-sized phylogenetic projects, Concatenator is able to process phylogenomic datasets of up to 30 000 markers. Availability and implementation Concatenator is written in Python, with C extensions for MAFFT and FastTree. Compiled stand-alone executables of Concatenator for MS Windows and Mac OS along with a detailed manual can be downloaded from www.itaxotools.org; the source code is openly available on GitHub (https://github.com/iTaxoTools/ConcatenatorGui).
- Published
- 2022
- Full Text
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44. Statistical evidence that honeybees competitively reduced wild bee abundance in the Munich Botanic Garden in 2020 compared to 2019
- Author
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Susanne S. Renner and A. Fleischmann
- Subjects
Animals ,Bees ,Plants ,Ecology, Evolution, Behavior and Systematics - Abstract
In a commentary on our paper (Renner et al., Oecologia 195:825–831, 2021), Harder and Miksha lay out why they think that our finding of higher honeybee abundances reducing wild bee abundances in an urban botanical garden is not statistically supported. Here, we explain the statistical test provided in our paper, which took advantage of a natural experiment offered by 2019 being a poorer year for bee keeping than 2020.
- Published
- 2021
45. Author response for 'Trees growing in Eastern North America experience higher autumn solar irradiation than their European relatives, but is nitrogen limitation another factor explaining anthocyanin‐red autumn leaves?'
- Author
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null Susanne S. Renner and null Constantin M. Zohner
- Published
- 2021
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46. Dead-End Hybridization in Walnut Trees Revealed by Large-Scale Genomic Sequence Data
- Author
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Wei-Ning Bai, Ya-Mei Ding, Xin-Rui Lin, Yu Liang, Wei-Ping Zhang, Lei Cao, Erli Pang, Da-Yong Zhang, and Susanne S. Renner
- Subjects
Gene Flow ,media_common.quotation_subject ,Juglans ,Biology ,medicine.disease_cause ,AcademicSubjects/SCI01180 ,Gene flow ,Trees ,Pollen ,Genetics ,medicine ,Humans ,Molecular Biology ,Gene ,hybridization ,Ecology, Evolution, Behavior and Systematics ,Discoveries ,chromosomal rearrangements ,media_common ,Hybrid ,AcademicSubjects/SCI01130 ,Genomics ,postzygotic reproductive barriers ,Sexual reproduction ,Speciation ,speciation ,Evolutionary biology ,Germination ,Hybridization, Genetic ,Pollen tube ,walnuts - Abstract
Although hybridization plays a large role in speciation, some unknown fraction of hybrid individuals never reproduces, instead remaining as genetic dead-ends. We investigated a morphologically distinct and culturally important Chinese walnut, Juglans hopeiensis, suspected to have arisen from hybridization of Persian walnut (J. regia) with Asian butternuts (J. cathayensis, J. mandshurica, and hybrids between J. cathayensis and J. mandshurica). Based on 151 whole-genome sequences of the relevant taxa, we discovered that all J. hopeiensis individuals are first-generation hybrids, with the time for the onset of gene flow estimated as 370,000 years, implying both strong postzygotic barriers and the presence of J. regia in China by that time. Six inversion regions enriched for genes associated with pollen germination and pollen tube growth may be involved in the postzygotic barriers that prevent sexual reproduction in the hybrids. Despite its long-recurrent origination and distinct traits, J. hopeiensis does not appear on the way to speciation.
- Published
- 2021
47. Evolution: How Flowers Switch from Nectar to Oil as a Pollinator Reward
- Author
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Susanne S. Renner
- Subjects
0301 basic medicine ,Plant Nectar ,Pollination ,Flowers ,Bees ,Biology ,medicine.disease_cause ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Reward ,Pollinator ,Pollen ,Botany ,medicine ,Animals ,Nectar ,General Agricultural and Biological Sciences ,030217 neurology & neurosurgery - Abstract
When flowers provide nectar, they can count on visits, and potential pollen transport, by many kinds of nectar-drinking animals. Yet, some flowers instead offer fatty oils that certain specialized bees gather with their forelegs. A recent study reveals how such a switch occurred and may have contributed to the formation of a new species.
- Published
- 2021
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48. In memoriam Professor Dr. Dieter Podlech
- Author
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Susanne S. Renner
- Subjects
Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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49. Phylogenomics Reveals an Ancient Hybrid Origin of the Persian Walnut
- Author
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Da-Yong Zhang, Bowen Zhang, Nan Li, Peng-Cheng Yan, Kui Lin, Xin-Hua Jiang, Wei-Ning Bai, Keith E. Woeste, Lin-Lin Xu, and Susanne S. Renner
- Subjects
0106 biological sciences ,0303 health sciences ,Nuclear gene ,biology ,Platycarya ,Introgression ,Pterocarya stenoptera ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Genome ,03 medical and health sciences ,Evolutionary biology ,Phylogenomics ,Genetics ,Approximate Bayesian computation ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Juglans - Abstract
Persian walnut (Juglans regia) is cultivated worldwide for its high-quality wood and nuts, but its origin has remained mysterious because in phylogenies it occupies an unresolved position between American black walnuts and Asian butternuts. Equally unclear is the origin of the only American butternut, J. cinerea. We resequenced the whole genome of 80 individuals from 19 of the 22 species of Juglans and assembled the genome of its relatives Pterocarya stenoptera and Platycarya strobilacea. Using phylogenetic-network analysis of single-copy nuclear genes, genome-wide site pattern probabilities, and Approximate Bayesian Computation, we discovered that J. regia (and its landrace J. sigillata) arose as a hybrid between the American and the Asian lineages and that J. cinerea resulted from massive introgression from an immigrating Asian butternut into the genome of an American black walnut. Approximate Bayesian Computation modeling placed the hybrid origin in the late Pliocene, ∼3.45 My, with both parental lineages since having gone extinct in Europe.
- Published
- 2019
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50. An illustrated step-by-step protocol for investigating liverwort chromosomes
- Author
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Susanne S. Renner and Aretuza Sousa
- Subjects
0106 biological sciences ,0301 basic medicine ,Sporophyte ,General Medicine ,Meristem ,Biology ,medicine.disease_cause ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Meiosis ,Pollen ,Antheridium ,Botany ,medicine ,Bryophyte ,Ploidy ,Mitosis ,010606 plant biology & botany - Abstract
Cytogenetic studies in bryophytes have been limited by the difficulty of obtaining sufficient dividing nuclei and by the absence of modern protocols. The technical difficulties stem from the plants’ small size and lack of roots and pollen mother cells, the main sources of cells in division in vascular plants. In bryophytes instead, tiny sporophytes, antheridia, or phyllid meristems must be used to obtain meiotic or mitotic chromosome spreads. We here describe the preparation of such spreads from phyllids, antheridia, and sporophytes in several species of liverworts and compare available protocols with or without prefixation treatments. We also provide illustrated step-by-step instructions. The three prefixation agents (including colchicine) that we tested failed to improve synchronization of cell divisions. Young sporophytes were the best source of diploid synchronized cells, while antheridia were the best source of haploid cells. For meiotic nuclei, a short fixation of capsule tissue at the right developmental stage with 45% acetic acid sufficed to conserve the DNA for cytological investigations, while for mitotic nuclei, fixation in 3:1 ethanol/glacial acetic acid for a longer period (4–24 h) worked well.
- Published
- 2021
- Full Text
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