1,348 results on '"Surya Pratap"'
Search Results
2. Green synthesized TiO2 nanoparticles as a stimulator for aquaculture growth of Oryza sativa L.
- Author
-
Diptarka Roy, Anil Kumar Yadav, and Surya Pratap Goutam
- Subjects
Green synthesis ,TiO2 nanoparticles ,Fruit extract ,Nutrient solution ,Aquaculture ,Oryza sativa L ,Environmental sciences ,GE1-350 ,Technology - Abstract
Depleting agricultural land and water resources with growing human civilization demands an alternative way for faster and more sustainable crop production techniques to meet the current requirements. Recently, nanotechnology-aided hydroponic agriculture (aquaculture) systems have brought remarkable attention. In this context, the present investigation focuses on applying green synthesized TiO2 nanoparticles in soil-free aquaculture systems to stimulate the germination and growth of Oryza sativa L. TiO2 nanoparticles are synthesized using Dillenia indica fruit extract and characterized using various spectroscopic and microscopic techniques. X-ray diffraction pattern (XRD) confirms the anatase phase of the synthesized TiO2 nanoparticles with an average crystallite size of 6.34 nm. Field emission scanning electron microscopy (FESEM) images exhibit spherical morphology, and high-resolution transmission electron microscopy (HRTEM) analysis indicates the most nanoparticles of sizes below 10 nm. The BET surface analysis indicates the mesoporous nature of synthesized nanoparticles, and their pore sizes are distributed between 1 and 10 nm as confirmed by BJH analysis, which is very similar to the result obtained from HRTEM images. Green synthesized TiO2 nanoparticles in Hoagland nutrient solution enhance germination and growth of Oryza sativa L. via soil-free aquaculture relative to previously commercially produced TiO2 nanoparticles and other metal oxide nanoparticles. Among different concentrations of synthesized TiO2 nanoparticles, a particular concentration (10 mg/L) in the nutrient solution efficiently stimulates germination and growth for Oryza sativa L., relative to the control system. TiO2 nanoparticles with a higher specific surface area adsorb nutrients and facilitate nutrient translocation with improved water uptake inside plants, thus stimulating plant growth and increasing fresh and dry biomass.
- Published
- 2025
- Full Text
- View/download PDF
3. Diagnostic Value of T1 Mapping in Detecting Iron Overload in Indian Patients with Thalassemia Major: A Comparison with T2* Mapping
- Author
-
Surya Pratap Singh, Priya Jagia, Vineeta Ojha, Tulika Seth, Nitish Naik, Kartik P. Ganga, and Sanjeev Kumar
- Subjects
T1 mapping ,thalassemia ,T2* mapping ,iron overload ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Purpose T2* is the gold standard for iron quantification in liver as well as myocardium. In this study, we evaluated the diagnostic accuracy of myocardial T1 mapping for the assessment of myocardial iron overload (MIO) as compared to the T2* mapping in patients with thalassemia major (TM).
- Published
- 2024
- Full Text
- View/download PDF
4. Catalytic Thioglycoside Activation with Diazo-Derived Copper Carbenes
- Author
-
Surya Pratap Singh, Umesh Chaudhary, and Indrajeet Sharma
- Subjects
earth-abundant metals ,copper catalysis ,thioglycoside donor ,orthogonal reactivity ,iterative synthesis ,intramolecular activation ,Organic chemistry ,QD241-441 - Abstract
Traditional glycosylation methods using thioglycosides often require harsh conditions or expensive metal catalysts. This study presents a more sustainable alternative by employing copper, an earth-abundant catalyst. We developed diazo-based thioglycoside donors that, through copper catalysis, undergo intramolecular activation to form glycosyl sulfonium ions, leading to the generation of oxocarbenium ions. This versatile approach efficiently accommodates a variety of O-nucleophiles, including primary, secondary, and tertiary, as well as complex bioactive molecules. It is compatible with various glycosyl donors and protecting groups, including superarmed, armed, and disarmed systems. Notably, the methodology operates orthogonally to traditional thioglycoside and alkyne donors and has been successfully applied to the orthogonal iterative synthesis of trisaccharides. Mechanistic insights were gained by studying the electronic effects of electron-donating (OMe) and electron-withdrawing (NO2) groups on the donors, offering a valuable understanding of the intramolecular reaction pathway.
- Published
- 2024
- Full Text
- View/download PDF
5. Study on pH dependent ON/OFF fluorescent switching behaviour of hydrothermally synthesised vanadium disulphide quantum dots (VS2-QDs)
- Author
-
Surya Pratap, Vijay Pratap, Sundeep Kumar, and Horesh Kumar
- Subjects
Vanadium disulphide ,Quantum dots ,Photoluminescence ,Quantum yield ,Zeta-potential ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
It is fascinating to design and develop an inorganic quantum dot (QDs) which exhibit luminescence features with ion concentration, temperature, and pH sensitivity dependence. Vanadium disulphide (VS2) belongs to the family of transition metal dichalcogenides (TMDs), and is extensively studied owing to its layered characteristics features in sensing and filtrations technology, however, its fluorescence features have not been well studied so far. The current work describes a widely adopted eco-friendly hydrothermal approach for the synthesis of VS2-QDs. The average size of particles was determined to be ∼10 nm by transmission electron microscopy (TEM) and Zetasizer analysis. The synthetic approach adopted here facilitates in situ functionalization of QDs, which results in their high stability in aqueous medium and enhanced sensitivity towards their surroundings. As most of the QDs show the sensitivity towards pH, a thorough investigation of VS2 QDs for their pH dependent photoluminescence has been carried out. The VS2-QDs were discovered to exhibit a remarkable luminescence intensity that was found to be about 11 times higher in basic conditions (pH ∼ 13, QY = ∼4.80 %) as compared to that in acidic conditions (pH ∼ 1, QY = ∼1.10 %). The root cause of this ON/OFF florescence flipping may be related to the functional groups (such as −SO42−, −NH2, OH−, etc.) attached over the surface of QDs, acid etching, and protonation–deprotonation process. This paper highlights the pH dependent switching behaviour of VS2-QDs that could offer valuable information for designing a futuristic pH-based device for biomedical applications.
- Published
- 2024
- Full Text
- View/download PDF
6. Overemphasizing individual differences and overlooking systemic factors reinforces educational inequality
- Author
-
Allison Zengilowski, Irum Maqbool, Surya Pratap Deka, Jesse C. Niebaum, Diego Placido, Benjamin Katz, Priti Shah, and Yuko Munakata
- Subjects
Special aspects of education ,LC8-6691 ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
- Full Text
- View/download PDF
7. Oleuropein confers neuroprotection against rotenone-induced model of Parkinson’s disease via BDNF/CREB/Akt pathway
- Author
-
Richa Singh, Walia Zahra, Saumitra Sen Singh, Hareram Birla, Aaina Singh Rathore, Priyanka Kumari Keshri, Hagera Dilnashin, Shekhar Singh, and Surya Pratap Singh
- Subjects
Medicine ,Science - Abstract
Abstract Major pathological features of Parkinson’s disease (PD) include increase in oxidative stress leading to the aggregation of α-synuclein, mitochondrial dysfunction and apoptosis of dopaminergic neurons. In addition, downregulation of the expression of neurotrophic factors like-Brain Derived Neurotrophic Factor (BDNF) is also involved in PD progression. There has been a lot of interest in trophic factor-based neuroprotective medicines over the past few decades to treat PD symptoms. Rotenone, an insecticide, inhibits the mitochondrial complex I causing overproduction of ROS, oxidative stress, and aggregation of α-synuclein. It has been shown that BDNF and Tropomyosin receptor kinase B (TrkB) interaction initiates the regulation of neuronal cell development and differentiation by the serine/threonine protein kinases like Akt and GSK-3β. Additionally, Transcription factor CREB (cAMP Response Element-binding protein) also determines the gene expression of BDNF. The homeostasis of these signalling cascades is compromised with the progression of PD. Therefore, maintaining the equilibrium of these signalling cascades will delay the onset of PD. Oleuropein (OLE), a polyphenolic compound present in olive leaves has been documented to cross blood brain barrier and shows potent antioxidative property. In the present study, the dose of 8, 16 and 32 mg/kg body weight (bwt) OLE was taken for dose standardisation. The optimised doses of 16 and 32 mg/kg bwt was found to be neuroprotective in Rotenone induced PD mouse model. OLE improves motor impairment and upregulate CREB regulation along with phosphorylation of Akt and GSK-3β in PD mouse. In addition, OLE also reduces the mitochondrial dysfunction by activation of enzyme complexes and downregulates the proapoptotic markers in Rotenone intoxicated mouse model. Overall, our study suggests that OLE may be used as a therapeutic agent for treatment of PD by regulating BDNF/CREB/Akt signalling pathway.
- Published
- 2023
- Full Text
- View/download PDF
8. Ten years' follow-up for cemented hip arthroplasty in patients
- Author
-
Imran Sajid, Javed Jameel, Sukhvinder Singh, Surya Pratap Singh, Ankit Varshney, and Sabeel Ahmad
- Subjects
cementing technique ,survivorship ,total hip arthroplasty ,Orthopedic surgery ,RD701-811 - Abstract
Introduction: Total hip arthroplasty (THA) is the preferred treatment for persistent disability due to hip pathologies and restoration of normal functions. Although there is a general consensus of using un-cemented implants for adults and elderly with good bone quality and cemented for senior citizen population, implant choice for middle aged group of 40 years to 60 years is still a subject of debate, especially in financial constrained situations. In our study, we have determined the implant survivorship and functional outcomes of cemented THA in patients between 40 and 60 years of age, at the minimum follow-up of 10 years with emphasis on standardization of cementing technique. Materials and Methods: This is a retrospective study including 25 patients who had undergone cemented hip arthroplasty. Data were collected from five different surgical centres, whose orthopedic surgeons had common surgical training and were following a common cementing technique. Results: Mean Harris Hip Score of 25 hips at final follow-up was 90 and Visual Analog Scale 1.88. The functional outcome was good to excellent at final follow-up in 89% hips. There was a significant improvement in pain and activity level after surgery (P < 0.001) and maintained at the final follow-up. Conclusion: Our series provides evidence for utility of cemented hip implants in low functional demand patients along with emphasizing the importance of a good cementing technique for the long-term survival of cemented hip arthroplasty in the age group of 40–60 years.
- Published
- 2022
- Full Text
- View/download PDF
9. Biophotonics in food technology: Quo vadis?
- Author
-
Jiro Karlo, Ram Prasad, and Surya Pratap Singh
- Subjects
Infrared spectroscopy ,Fluorescence spectroscopy ,Bio-photonics ,Bioimaging ,Food technology ,Raman spectroscopy ,Agriculture (General) ,S1-972 ,Nutrition. Foods and food supply ,TX341-641 - Abstract
In the race for feeding the growing population and making a commercial profit, food that is our daily need is manipulated and adulterated in many ways. Food forgery is real, and can cause a concerning impact on the health of an individual. Food forgery includes adulteration, tampering with the colour, flavour, the texture of food, tampering and mislabelling food packages, shortcuts in the farming and manufacturing process, excessive use of growth hormone, or pesticide, usage of substandard ingredients, and many more. Conventional methods for monitoring the quality of food are diligent, invasive, and time taking. Bio-photonic techniques such as infrared spectroscopy, fluorescence spectroscopy, Raman spectroscopy, and imaging technology combined with computational power give a reliable, non-destructive, portable, non-invasive way to do online quality monitoring and shelf-life prediction of the food. Bio-photonics is the interdisciplinary field of science that studies the interaction of light with biological matters. Studying the emission, absorption, and scattering phenomenon of light when it interacts with the food can give us different aspects of food quantity and quality. These techniques have the potential to detect pathogens, contamination, and protein and lipid structural changes in food at the molecular level. This review article aims to summarize the different spectroscopic techniques and their challenges in analysing and monitoring the different aspects of food quality.
- Published
- 2023
- Full Text
- View/download PDF
10. Anti-Parkinsonian effect of Mucuna pruriens and Ursolic acid on GSK3β/Calcium signaling in neuroprotection against Rotenone-induced Parkinsonism
- Author
-
Walia Zahra, Hareram Birla, Saumitra Sen Singh, Aaina Singh Rathore, Hagera Dilnashin, Richa Singh, Priyanka Kumari Keshri, Shekhar Singh, and Surya Pratap Singh
- Subjects
Parkinson’ disease ,Ca2+ level ,GSK-3β ,Rotenone ,Mucuna pruriens ,Ursolic acid ,Other systems of medicine ,RZ201-999 - Abstract
Background: Exposure of environmental toxin is linked to the onset of Parkinson's disease (PD), especially in majority of sporadic cases. One of such toxins, namely Rotenone has been widely investigated to produce the Parkinsonian model in laboratories. The toxin causes the death of the dopaminergic neurons, aggregation of α-Synuclein, oxidative stress, neuroinflammation and initiate other pathways leading to PD pathogenesis. Glycogen synthase kinase-3 (GSK-3) is a pleiotropic serine/threonine protein kinase found in eukaryotes. One of the two isoforms of the enzyme; GSK-3β plays an important role in regulating the pathogenesis of neurodegenerative diseases, including PD. Whereas, Calcium (Ca2+) is found to regulate important cellular activities in all eukaryotic cells. However, an increased Ca2+ concentration is seen during ageing and the progression of neurodegenerative diseases. Thus, maintaining the Ca2+ homoeostasis is very crucial for proper cell function. Methodology: Hence, behavioural tests were performed to assess the motor abnormalities; immunohistochemical and western blot analyses to identify the alteration in the protein expression; and mitochondrial complexes and antioxidants assay to detect the extent of mitochondrial dysfunction in Rotenone-induced Parkinsonian mouse model. Alternatively, the effect of Mucuna pruriens (Mp) and Ursolic acid (UA) in the PD mouse model was also observed. Results: Increased Ca2+level, and activation of GSK-3β was observed in the Rotenone-intoxicated mouse model of PD. The extract of Mp and UA, on the other hand shows neuroprotection through their anti-oxidative and anti-inflammatory properties. However, their role in maintaining the Ca2+ level and GSK-3β signaling is not yet observed in PD. So, our study deals with the downregulated activity of GSK-3β and Ca2+ level upon the administration of Mp extract and UA, thereby providing neuroprotection to the PD mouse model. Conclusion: Thus, this study deals to explore further the neuroprotective activity of Mp and UA through GSK-3β/Calcium signaling by ameliorating mitochondrial dysfunction mediated apoptosis and inhibiting the overexpression of α-Synuclein in Rotenone-induced PD mouse model.
- Published
- 2022
- Full Text
- View/download PDF
11. Active surveillance of adverse events following coronavirus disease 2019 immunization in the elderly population: A prospective multi-centric study from Jaipur, Rajasthan, India
- Author
-
Surya Pratap Singh Tiwari, Bhandari Anil, Rathore Monika, Sharma Lokendra, Sharma Aditya, Jain Smita, and Agarwal Madhav
- Subjects
adverse events following immunization ,coronavirus disease 2019 vaccine ,covishield (chadox1 ncov-19) adverse events following immunization ,Geriatrics ,RC952-954.6 - Abstract
Background: Vaccine against coronavirus disease 2019 (COVID-19) was rolled out in India to prevent the infection caused by severe acute respiratory syndrome coronavirus 2. We aimed at investigating the adverse events following immunization (AEFI) associated with the first dose of Covishield (ChAdOx1 nCoV-19) vaccine in the elderly population (60 and above). Methodology: An observational study, conducted among 463 vaccinated individuals at multiple community health centers in Jaipur, of AEFIs associated with the first dose of Covishield vaccine. We investigated these AEFIs through telephonic interviews, using pharmacovigilance per forma provided from the Indian Pharmacopoeia Commission, Ghaziabad. Results: Four hundred and sixty-three people responded to the telephone survey. About 7.7% (36/463) of the respondents experienced AEFIs. Of these, commonly reported systemic AEFI were fever (47.2%), fatigue (38.8%), dizziness (5.5%), and diarrhea (2.7%), and local AEFI were injection site soreness (27.7%) and itching with rash (2.7%) AEFI reported in the age group (60–70) was higher (8.7%, 26/297) than those above 70 (6.2%, 10/166). Females (9.9%, 20/202) were associated with higher AEFI than males (6.1%, 16/261). More than one-third (43.8%, 203/463, P = 0.001) were hesitant before vaccination. Respondents in the age group of 60–70 years (55.2%, 164/297) were more hesitant than those above 70 (23.4%, 39/166). There is no association between gender and AEFI status and age group and respondent's AEFI. Conclusion: Only 7.7% of the respondents experienced AEFIs associated with ChAdOx1 nCoV-19, though all were mild and self-limiting. There were no serious events requiring hospitalization, and most AEFIs improved within few days. Vaccine hesitancy among 43.8% of the respondents could be attributed to the unscientific information on social media.
- Published
- 2021
- Full Text
- View/download PDF
12. Active surveillance of adverse events following ChAdOx1 nCoV-19 immunization in geriatric population: a prospective multi-centric study from Jaipur, Rajasthan, India
- Author
-
Anil Bhandari, Surya Pratap Singh Tiwari, Monika Rathore, Lokendra Sharma, and Smita Jain
- Subjects
COVID-19 vaccine ,ChAdOx1nCoV-19 ,adverse events following immunization. ,Geriatrics ,RC952-954.6 - Abstract
India launched its coronavirus disease 2019 (COVID-19) vaccination drive starting with healthcare workers. The aim of the study was to evaluate adverse events following immunization (AEFI) amongst the Geriatric population associated with two doses of ChAdOx1 nCoV-19 vaccine. We also evaluated association of AEFI according to gender and elderly age groups. An observational study, conducted among 437 individuals vaccinated at multiple community healthcare centers in Jaipur, of AEFIs associated with both doses of ChAdOx1 nCoV-19 vaccine, via telephonic interviews on the day of vaccination-Day 0, Day 7 and Day 15 from vaccination. 463 vaccinated individuals who responded for first dose AEFIs, and 437 (94.3% 437/463) responded to the telephone interview regarding the second dose. Of these, 5.5% (24/437) reported AEFIs for the second dose. Among 60 respondents who reported AEFI (both doses) fever (26) and fatigue (22) were the most reported systemic AEFI. Local AEFIs were injection site soreness (23). The AEFIs (both systemic and local) in respondents mostly lasted for 1-2 days. AEFI reported by respondents in the age group 60- 70 years was higher than those above 70 years. Female respondents were associated with higher AEFI than the males. The AEFIs of both the doses were observed in the first 2 days predominantly. Symptoms were minor, short lived and selflimiting. No serious adverse events attributable to vaccines were reported in our study. Adverse event following immunization is independent of gender and age distribution for both the doses.
- Published
- 2022
- Full Text
- View/download PDF
13. Feasibility of sequential anaerobic-aerobic integrated settler-based biofilm reactor for onsite treatment of domestic wastewater
- Author
-
Surya Pratap Singh, Meena Kumari Sharma, Shailesh Kumar Sarangi, Shatrudhan Pandey, Ahmed Farouk Deifalla, and S M Mozammil Hasnain
- Subjects
biofilter ,domestic wastewater ,hydraulic loading ,onsite treatment ,quality assessment ,sequential anaerobic-aerobic treatment ,Environmental sciences ,GE1-350 ,Meteorology. Climatology ,QC851-999 - Abstract
The present study investigates the applicability of sequential anaerobic aerobic integrated settler-based biofilm reactor (SAABR) for the onsite treatment of domestic wastewater. The main aim of the study is to overcome the inherent flaws in an anaerobic system as well as enhancing the effluent quality by means of aerobic post-treatment. The sequential system consisted of an anaerobic settler is followed by two biofilters, anaerobic as well aerobic in series. The first biofilter is anaerobic and the second one is aerobic. The system was run on two hydraulic loading conditions (steady and non-steady flow) with a 24-hour hydraulic retention time (HRT) for the anaerobic system and a 2-hour HRT of aerobic filters. It was found that the performance of the system at steady flow stood at 93.9 ± 2.6, 93.3 ± 1.8, 91.2 ± 4.2, 75.8 ± 3.8 and 98.7 ± 1.1% in terms of total suspended solids (TSS), biochemical oxygen demand (BOD), chemical oxygen demand (COD), total nitrogen (TN) and faecal coliform (FC), respectively while at non-steady flow, it decreased slightly. The Field Emission Scanning Electron Microscope (FESEM) showed the presence of anaerobic bacteria in the system. The system is able to overcome the major flaws of the anaerobic systems and able to deliver high effluent quality. The study demonstrated that the sequential system can be a sustainable alternative for the onsite treatment of domestic wastewater, particularly in rural areas of the developing countries like India.
- Published
- 2023
- Full Text
- View/download PDF
14. Trichoderma spp. mediated induction of systemic defense response in brinjal against Sclerotinia sclerotiorum
- Author
-
Satyendra Pratap Singh, Chetan Keswani, Surya Pratap Singh, Estibaliz Sansinenea, and Trinh Xuan Hoat
- Subjects
Microbial Consortium ,Trichoderma ,Sclerotinia sclerotiorum ,Phenolics ,Brinjal ,Microbiology ,QR1-502 ,Genetics ,QH426-470 - Abstract
Induction of resistance to pathogen is associated with the colonization of root by Trichoderma spp. has been attributed as one of the major mechanisms contributing to pathogenic invasion. The present study sheds light on the defense network of brinjal plant bioprimed with Trichoderma spp. challenged with Sclerotinia sclerotiorum. Plants treated with dual inoculation of Trichoderma harzianum and Trichoderma asperellum triggered further synthesis of TPC under S. sclerotiorum challenge with maximum increment recorded at 72 hours. In consortium treated and pathogen challenged plants, a higher amount of shikimic acid was observed at 72 hours, whereas other phenolics showed little differences among the treatments. The consortium treatment showed significantly higher defense related enzymes (Phenylalanine Ammonia Lyase, Peroxidase and Polyphenol Oxidase) activity than other treatments. The study signifies how Trichoderma spp. reprograms the host's defense network to provide robust protection against S. sclerotiorum. In the present case, overall protection was provided to the brinjal plants against the attack of S. sclerotiorum.
- Published
- 2021
- Full Text
- View/download PDF
15. Acute Aortic Thrombus with Splenic Infarction in a Patient with COVID-19 Infection
- Author
-
Priya Singh and Surya Pratap Singh
- Subjects
COVID-19 ,Splenic infarcts ,Acute Aortic thrombus ,Medicine - Abstract
Acute Aortic thrombus with splenic infarction is a rare complication of COVID-19. This manuscript highlights the importance of early identification of this complication with abdominal imaging and early initiation of anticoagulation despite moderate severity of the disease.
- Published
- 2021
16. Transverse vaginal septum causing hematometrocolpos
- Author
-
Priya Singh, Surya Pratap Singh, and Vaibhav Gupta
- Subjects
Medicine - Published
- 2022
- Full Text
- View/download PDF
17. Isolation and Characterization of Microbial Strains from Refinery Effluent to Screen their Bioremediation Potential
- Author
-
Anuja Mishra, Aditya Saxena, and Surya Pratap Singh
- Subjects
biodegradation ,bioremediation ,petroleum products ,safe and sustainable environment. ,Microbiology ,QR1-502 - Abstract
In the present world of industrial revolution, spills of petroleum products and oil are one of the major sources of the contamination in the ecosystem and cause serious health hazards for humans and livestock. Therefore, the removal of these pollutants has become necessity of the time. Applications of new techniques such as bioremediation and biodegradation, over conventional methods are much more promising for safe and sustainable environment. Aim-The aim of this study is to isolate and characterize microbial strains from effluent of Mathura Refinery – Indian Oil Corporation Limited, the microscopic and biochemical studies and their potential of bioremediation. Bacteria were isolated from Mathura refinery IOCL, Based on the biochemical studies six morphologically distinct bacterial strains with promising bioremediation role were identified. To check the degradation of crude oil sample by bacterial isolates Bushnallhass media and separation funnel method were performed. Six bacteria were isolates from Mathura refinery effluentsand all six bacteria have ability to degrade the crude oil in different range. Maximum potential to degrade the crude oil were identified in Pseudomonas. This study might be important in an important step towards bioremediation techniques
- Published
- 2019
- Full Text
- View/download PDF
18. Neuroprotective effects of Withania somnifera in BPA induced-cognitive dysfunction and oxidative stress in mice
- Author
-
Hareram Birla, Chetan Keswani, Sachchida Nand Rai, Saumitra Sen Singh, Walia Zahra, Hagera Dilnashin, Aaina Singh Rathore, and Surya Pratap Singh
- Subjects
Cognitive impairment ,Neurotoxicity ,Oxidative stress ,Spatial memory ,Reactive oxygen species ,Biomarkers ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Bisphenol A (BPA), a major endocrine disruptor and a xenobiotic compound is used abundantly in the production of polycarbonate plastics and epoxy resins. Human exposure to this compound is primarily via its leaching from the protective internal epoxy resin coatings of containers into the food and beverages. In addition, the plastics used in dental prostheses and sealants also contain considerable amount of BPA and have a high risk of human exposure. Since it is a well-known endocrine disruptor and closely mimics the molecular structure of human estrogen thereby impairing learning and memory. Withania somnifera (Ws), commonly known as Ashwagandha is known for its varied therapeutic uses in Ayurvedic system of medicine. The present study was undertaken to demonstrate the impairment induced by BPA on the spatial learning, working memory and its alleviation by Ws in Swiss albino mice. The study was conducted on thirty Swiss albino mice, randomly distributed among three groups: control, BPA and BPA + Ws. The behavioral recovery after treatment with Ws was investigated using the Y-maize and Morris water maize test. Whereas, for the estimation of recovery of NMDA receptor which is related to learning and memory in hippocampus region by western blot and immunohistochemistry. Furthermore, the oxidative stress and antioxidant level was assessed by biochemical tests like MDA, SOD and catalase. Results The study revealed that administration of Ws alleviated the behavioral deficits induced by BPA. Alongside, Ws treatment reinstated the number of NMDA receptors in hippocampus region and showed anti-oxidative property while ameliorating the endogenous anti-oxidant level in the brain. Conclusion These findings suggest that Ws significantly ameliorates the level of BPA intoxicated oxidative stress thereby potentially treating cognitive dysfunction which acts as the primary symptom in a number of neurodegenerative diseases.
- Published
- 2019
- Full Text
- View/download PDF
19. High-order meshless global stability analysis of Taylor-Couette flows in complex domains
- Author
-
Unnikrishnan, Akash, Narayanan, Vinod, and Vanka, Surya Pratap
- Subjects
Physics - Fluid Dynamics ,Mathematical Physics ,Physics - Computational Physics - Abstract
Recently, meshless methods have become popular in numerically solving partial differential equations and have been employed to solve equations governing fluid flows, heat transfer, and species transport. In the present study, a numerical solver is developed employing the meshless framework to efficiently compute the hydrodynamic stability of fluid flows in complex geometries. The developed method is tested on two cases of Taylor-Couette flows. The concentric case represents the parallel flow assumption incorporated in the Orr-Sommerfeld model and the eccentric Taylor-Couette flow incorporates a non-parallel base flow with separation bubbles. The method was validated against earlier works by Marcus [1], Oikawa et al. [2], Leclercq et al. [3], and Mittal et al. [4]. The results for the two cases and the effectiveness of the method are discussed in detail. The method is then applied to Taylor-Couette flow in an elliptical enclosure and the stability of the flow is investigated.
- Published
- 2024
20. HAT and HDAC: Enzyme with Contradictory Action in Neurodegenerative Diseases
- Author
-
Singh, Richa, Rathore, Aaina Singh, Dilnashin, Hagera, Keshri, Priyanka Kumari, Gupta, Nitesh Kumar, Prakash, Singh Ankit Satya, Zahra, Walia, Singh, Shekhar, and Singh, Surya Pratap
- Published
- 2024
- Full Text
- View/download PDF
21. Unraveling the AKT/ERK cascade and its role in Parkinson disease
- Author
-
Keshri, Priyanka Kumari and Singh, Surya Pratap
- Published
- 2024
- Full Text
- View/download PDF
22. Construction of E. coli-Mycobacterium shuttle vectors with a variety of expression systems and polypeptide tags for gene expression in mycobacteria.
- Author
-
Surya Pratap Seniya, Priya Yadav, and Vikas Jain
- Subjects
Medicine ,Science - Abstract
Cloning and expression of a desired gene is indispensable in molecular biology studies. Expression vectors, in this regard, should offer much needed flexibility and choice of cloning strategies for both in vivo and in vitro protein expression experiments. Furthermore, availability of option to choose from various reporter tags allows one to be flexible during designing of an experiment in a more relevant manner. Thus, the need of a versatile expression system cannot be ignored. Although several different expression vectors are available for gene expression in mycobacteria, they lack the required versatility of expression and the inclusion of reporter tags. We here present the construction of a set of nine E. coli-Mycobacterium shuttle plasmids, which offer a combination of three mycobacterial promoter systems (heat shock inducible-hsp60, tetracycline-, and acetamide-inducible) along with three polypeptide tags (Green Fluorescent Protein (GFP), Glutathione S-transferase (GST) and hexa-histidine tag). These vectors offer the cloning of a target gene in all the nine given vectors in parallel, thus allowing the generation of recombinant plasmids that will express the target gene from different promoters with different tags. Here, while the hexa-histidine and GST tags can be used for protein purification and pull-down experiments, the GFP-tag can be used for protein localization within the cell. Additionally, the vectors also offer the choice of positioning of the reporter tag either at the N-terminus or at the C-terminus of the expressed protein, which is achieved by cloning of the gene at any of the two blunt-end restriction enzyme sites available in the vector. We believe that these plasmids will be extremely useful in the gene expression studies in mycobacteria by offering the choices of promoters and reporters. Our work also paves the way to developing more such plasmids with other tags and promoters that may find use in mycobacterial biology.
- Published
- 2020
- Full Text
- View/download PDF
23. Quantitative Elasticity of Flexible Polymer Chains Using Interferometer-Based AFM
- Author
-
Vikhyaat Ahlawat, Surya Pratap S. Deopa, and Shivprasad Patil
- Subjects
AFM ,oscillatory response ,persistence length ,Chemistry ,QD1-999 - Abstract
We estimate the elasticity of single polymer chains using atomic force microscope (AFM)-based oscillatory experiments. An accurate estimate of elasticity using AFM is limited by assumptions in describing the dynamics of an oscillating cantilever. Here, we use a home-built fiber-interferometry-based detection system that allows a simple and universal point-mass description of cantilever oscillations. By oscillating the cantilever base and detecting changes in cantilever oscillations with an interferometer, we extracted stiffness versus extension profiles for polymers. For polyethylene glycol (PEG) in a good solvent, stiffness–extension data showed significant deviation from conventional force–extension curves (FECs) measured in constant velocity pulling experiments. Furthermore, modeling stiffness data with an entropic worm-like chain (WLC) model yielded a persistence length of (0.5 ± 0.2 nm) compared to anomaly low value (0.12 nm ± 0.01) in conventional pulling experiments. This value also matched well with equilibrium measurements performed using magnetic tweezers. In contrast, polystyrene (PS) in a poor solvent, like water, showed no deviation between the two experiments. However, the stiffness profile for PS in good solvent (8M Urea) showed significant deviation from conventional force–extension curves. We obtained a persistence length of (0.8 ± 0.2 nm) compared to (0.22 nm ± 0.01) in pulling experiments. Our unambiguous measurements using interferometer yield physically acceptable values of persistence length. It validates the WLC model in good solvents but suggests caution for its use in poor solvents.
- Published
- 2022
- Full Text
- View/download PDF
24. Dermorphin [D-Arg2, Lys4] (1-4) Amide Alleviates Frostbite-Induced Pain by Regulating TRP Channel-Mediated Microglial Activation and Neuroinflammation
- Author
-
Ummadisetty, Obulapathi, Akhilesh, Gadepalli, Anagha, Chouhan, Deepak, Patil, Utkarsh, Singh, Surya Pratap, Singh, Sanjay, and Tiwari, Vinod
- Published
- 2024
- Full Text
- View/download PDF
25. Commentary: Synaptic vesicle glycoprotein 2C (SV2C) modulates dopamine release and is disrupted in Parkinson disease
- Author
-
Sachchida Nand Rai, Hareram Birla, Walia Zahra, Saumitra Sen Singh, and Surya Pratap Singh
- Subjects
Parkinson disease ,dopamine ,synapses ,SV2C ,basal ganglia ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2018
- Full Text
- View/download PDF
26. Synthesized Gold Nanoparticles with Moringa Oleifera leaf Extract Induce Mitotic Arrest (G2/M phase) and Apoptosis in Dalton’s Lymphoma Cells
- Author
-
Kumar, Sandeep, Shukla, Alok, Singh, Surya Pratap, Singh, Rishi Kant, Patel, Anand Kumar, Verma, Praveen Kumar, Kumar, Sanjay, Kumar, Naveen, Singh, Varsha, Wasnik, Kirti, and Acharya, Arbind
- Published
- 2024
- Full Text
- View/download PDF
27. Taylor-Couette flow in an elliptical enclosure generated by an inner rotating circular cylinder
- Author
-
Unnikrishnan, Akash, Vanka, Surya Pratap, and Narayanan, Vinod
- Subjects
Physics - Fluid Dynamics ,Physics - Computational Physics - Abstract
Taylor-Couette flow between rotating cylinders is a classical problem in fluid mechanics and has been extensively studied in the case of two concentric circular cylinders. There have been relatively small number of studies in complex-shaped cylinders with one or both cylinders rotating. In this paper, we study the characteristics of Taylor cells in an elliptical outer cylinder with a rotating concentric inner circular cylinder. We numerically solve the three-dimensional unsteady Navier-Stokes equations assuming periodicity in the axial direction. We use a Fourier-spectral meshless discretization by interpolating variables at scattered points using polyharmonic splines and appended polynomials. A pressure-projection algorithm is used to advance the flow equations in time. Results are presented for an ellipse of aspect ratio two and for several flow Reynolds numbers ($Re = \omega r_i (b-r_i))/\nu$, where $\omega$ = angular velocity [rad/s], $r_i$ = radius of inner cylinder, $b$ = semi-minor axis, and $\nu$ = kinematic viscosity) from subcritical to 300. Streamlines, contours of axial velocity, pressure, vorticity, and temperature are presented along with surfaces of Q criterion. The flow is observed to be steady until $Re = 300$ and unsteady at $Re = 350$., Comment: 35 pages, 33 figures
- Published
- 2023
- Full Text
- View/download PDF
28. OriCon3D: Effective 3D Object Detection using Orientation and Confidence
- Author
-
Rajani, Dhyey Manish, Singh, Surya Pratap, and Swayampakula, Rahul Kashyap
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
In this paper, we propose an advanced methodology for the detection of 3D objects and precise estimation of their spatial positions from a single image. Unlike conventional frameworks that rely solely on center-point and dimension predictions, our research leverages a deep convolutional neural network-based 3D object weighted orientation regression paradigm. These estimates are then seamlessly integrated with geometric constraints obtained from a 2D bounding box, resulting in derivation of a comprehensive 3D bounding box. Our novel network design encompasses two key outputs. The first output involves the estimation of 3D object orientation through the utilization of a discrete-continuous loss function. Simultaneously, the second output predicts objectivity-based confidence scores with minimal variance. Additionally, we also introduce enhancements to our methodology through the incorporation of lightweight residual feature extractors. By combining the derived estimates with the geometric constraints inherent in the 2D bounding box, our approach significantly improves the accuracy of 3D object pose determination, surpassing baseline methodologies. Our method is rigorously evaluated on the KITTI 3D object detection benchmark, demonstrating superior performance.
- Published
- 2023
29. Twilight SLAM: Navigating Low-Light Environments
- Author
-
Singh, Surya Pratap, Mazotti, Billy, Rajani, Dhyey Manish, Mayilvahanan, Sarvesh, Li, Guoyuan, and Ghaffari, Maani
- Subjects
Computer Science - Robotics - Abstract
This paper presents a detailed examination of low-light visual Simultaneous Localization and Mapping (SLAM) pipelines, focusing on the integration of state-of-the-art (SOTA) low-light image enhancement algorithms with standard and contemporary SLAM frameworks. The primary objective of our work is to address a pivotal question: Does illuminating visual input significantly improve localization accuracy in both semi-dark and dark environments? In contrast to previous works that primarily address partially dim-lit datasets, we comprehensively evaluate various low-light SLAM pipelines across obscurely-lit environments. Employing a meticulous experimental approach, we qualitatively and quantitatively assess different combinations of image enhancers and SLAM frameworks, identifying the best-performing combinations for feature-based visual SLAM. The findings advance low-light SLAM by highlighting the practical implications of enhancing visual input for improved localization accuracy in challenging lighting conditions. This paper also offers valuable insights, encouraging further exploration of visual enhancement strategies for enhanced SLAM performance in real-world scenarios.
- Published
- 2023
30. Biochemical Changes in Irradiated Oral Mucosa: A FTIR Spectroscopic Study
- Author
-
Helena Ukkonen, Simo Vuokila, Jopi J. W. Mikkonen, Hannah Dekker, Engelbert A. J. M. Schulten, Elisabeth Bloemena, Arto Koistinen, Tulio A. Valdez, Arja M. Kullaa, and Surya Pratap Singh
- Subjects
FTIR spectroscopy ,head and neck cancer ,radiotherapy ,Biotechnology ,TP248.13-248.65 - Abstract
Radiation exposure during the course of treatment in head and neck cancer (HNC) patients can induce both structural and biochemical anomalies. The present study is focused on utilizing infrared imaging for the identification of the minor biochemical alterations in the oral mucosa. Chemical maps generated using glycoprotein band indicates its differential distribution along the superficial layer. Spectra extracted from this layer suggests changes in overall nucleic acid and protein content in response to the therapeutic irradiation. Discrimination among control and irradiated groups have been achieved using principal component analysis. Findings of this preliminary study further support prospective utilization of Fourier Transform InfraRed (FTIR) imaging as a non-destructive, label-free tool for objective assessment of the oral mucosa in patient groups with or without radiation therapy.
- Published
- 2019
- Full Text
- View/download PDF
31. Dynamics of two air bubbles rising in a shear-thinning fluid
- Author
-
Kumar, Purushotam and Vanka, Surya Pratap
- Subjects
Physics - Fluid Dynamics ,Physics - Computational Physics - Abstract
In this paper, we have studied the three-dimensional dynamics of two equally sized air bubbles rising in a shear-thinning fluid. We have used the combined level set and volume of fluid (CLSVOF) method to track interface, maintain mass balance and estimate the interface curvature. Additionally, we have incorporated a Sharp Surface Force Method (SSF) for surface tension forces. This method significantly suppressed the spurious velocities commonly observed with the conventional volume of fluid method and the Continuum Surface Force (CSF). The algorithm is implemented in an in-house code called CUFLOW and runs on multiple GPUs platform. We have explored the effects of fluid rheology on the three-dimensional dynamics of two in-line bubbles. Two power-law indices (0.5 and 1) are investigated to highlight differences in shear-thinning and Newtonian fluids. For a range of parameters examined here, bubbles motion in a shear-thinning fluid is seen to be unsteady with significant shape oscillations. Further, we have examined the rise velocity, droplets rise path, transient shapes and found that modification of viscosity by the motion of the leading bubble changes the dynamics of the trailing bubble., Comment: arXiv admin note: text overlap with arXiv:2301.01797
- Published
- 2023
32. Dynamics of Argon Gas Bubbles Rising in Liquid Steel in the Presence of Transverse Magnetic Field
- Author
-
Kumar, Purushotam and Vanka, Surya Pratap
- Subjects
Physics - Fluid Dynamics ,Physics - Computational Physics - Abstract
Bubbly flows are present in various industrial processes including metallurgical processes in which gas bubbles are injected at the bottom of bulk liquid metal to stir the liquid metal and homogenize the metal. Understanding the motion of such bubbles is essential, as it has been shown that bubble flotation can remove inclusions. In this work, we have numerically studied three-dimensional dynamics of a pair of inline Argon bubbles rising in molten steel under the influence of a transverse magnetic field. We have explored the effects of two transverse magnetic field strengths (Bx = 0 and 0.2 T). The bubbles' motion and transient rise velocities are compared under different magnetic fields. The shape deformations and path of the bubbles are discussed. The flow structures behind the bubbles are analyzed. We found that structures are more organized and elongated under a magnetic field, whereas it is complex and intertwined when the magnetic field is not included. We have used a geometry construction-based volume of fluid (VOF) method to track interface, maintain mass balance and estimate the interface curvature. Additionally, we have incorporated a Sharp Surface Force Method (SSF) for surface tension forces. The algorithm is able to minimize the spurious velocities.
- Published
- 2023
33. LoRaSONN: A Novel Self-Operational Neural Network Learning Framework for RF-Fingerprint Identification of LoRa Devices.
- Author
-
Surya Pratap Singh, Arka Roy, and Udit Satija
- Published
- 2024
- Full Text
- View/download PDF
34. Symbolic Approach in Modeling of Flexible Multi-body Systems Using Absolute Nodal Coordinate Formulation (ANCF) Cable Element
- Author
-
Rathour, Surya Pratap, Rama Krishna, K., Chaari, Fakher, Series Editor, Gherardini, Francesco, Series Editor, Ivanov, Vitalii, Series Editor, Haddar, Mohamed, Series Editor, Cavas-Martínez, Francisco, Editorial Board Member, di Mare, Francesca, Editorial Board Member, Kwon, Young W., Editorial Board Member, Tolio, Tullio A. M., Editorial Board Member, Trojanowska, Justyna, Editorial Board Member, Schmitt, Robert, Editorial Board Member, Xu, Jinyang, Editorial Board Member, Kumar, Rajana Suresh, editor, Sanyal, Shubhashis, editor, and Pathak, P. M., editor
- Published
- 2024
- Full Text
- View/download PDF
35. Simulation of Heat Conduction in Complex Domains of Multi-material Composites using a Meshless Method
- Author
-
Bartwal, Naman, Shahane, Shantanu, Roy, Somnath, and Vanka, Surya Pratap
- Subjects
Mathematics - Numerical Analysis - Abstract
Several engineering applications involve complex materials with significant and discontinuous variations in thermophysical properties. These include materials for thermal storage, biological tissues with blood capillaries, etc. For such applications, numerical simulations must exercise care in not smearing the interfaces by interpolating variables across the interfaces of the subdomains. In this paper, we describe a high accuracy meshless method that uses domain decomposition and cloud-based interpolation of scattered data to solve the heat conduction equation in such situations. The polyharmonic spline (PHS) function with appended polynomial of prescribed degree is used for discretization. A flux balance condition is satisfied at the interface points and the clouds of interpolation points are restricted to be within respective domains. Compared with previously proposed meshless algorithms with domain decomposition, the cloud-based interpolations are numerically better conditioned, and achieve high accuracy through the appended polynomial. The accuracy of the algorithm is demonstrated in several two and three dimensional problems using manufactured solutions to the heat conduction equation with sharp discontinuity in thermal conductivity. Subsequently, we demonstrate the applicability of the algorithm to solve heat conduction in complex domains with practical boundary conditions and internal heat generation. Systematic computations with varying conductivity ratios, interpoint spacing and degree of appended polynomial are performed to investigate the accuracy of the algorithm.
- Published
- 2022
36. Direct and simultaneous measurement of the stiffness and internal friction of a single folded protein
- Author
-
Deopa, Surya Pratap S, Rajput, Shatruhan Singh, Kumar, Aadarsh, and Patil, Shivprasad
- Subjects
Physics - Biological Physics ,Condensed Matter - Soft Condensed Matter - Abstract
The nanomechanical response of a folded single protein, the natural nanomachine responsible for myriad biological processes, provides insight into its function. The conformational flexibility of a folded state, characterized by its viscoelasticity, allows proteins to adopt different shapes to perform their function. Despite efforts, its direct measurement has not been possible so far. We present a direct and simultaneous measurement of the stiffness and internal friction of the folded domains of the protein titin using a special interferometer based atomic force microscope. We analysed the data by carefully separating different contributions affecting the response of the experimental probe to obtain the folded state's viscoelasticity. Above ~ 95 pN of force, the individual immunoglobulins of titin transition from an elastic solid-like native state to a soft viscoelastic intermediate., Comment: 25 pages including supplementary information, 18 figures
- Published
- 2022
- Full Text
- View/download PDF
37. Overemphasizing individual differences and overlooking systemic factors reinforces educational inequality
- Author
-
Zengilowski, Allison, Maqbool, Irum, Deka, Surya Pratap, Niebaum, Jesse C, Placido, Diego, Katz, Benjamin, Shah, Priti, and Munakata, Yuko
- Subjects
Reduced Inequalities - Published
- 2023
38. Combination of Drug Delivery through Nanocarriers for Brain Diseases
- Author
-
Dilnashin, Hagera, primary, Singh, Shekhar, additional, Singh, Richa, additional, and Singh, Surya Pratap, additional
- Published
- 2024
- Full Text
- View/download PDF
39. Mapping forest phenological shift in Nilgiri Biosphere Reserve, Western Ghats: Response to climate change
- Author
-
Kishore, Bodi Surya Pratap Chandra, Kumar, Amit, and Saikia, Purabi
- Published
- 2024
- Full Text
- View/download PDF
40. Consistency and Convergence of a High Order Accurate Meshless Method for Solution of Incompressible Fluid Flows
- Author
-
Shahane, Shantanu and Vanka, Surya Pratap
- Subjects
Mathematics - Numerical Analysis ,Physics - Fluid Dynamics - Abstract
Computations of incompressible flows with velocity boundary conditions require solution of a Poisson equation for pressure with all Neumann boundary conditions. Discretization of such a Poisson equation results in a rank-deficient matrix of coefficients. When a non-conservative discretization method such as finite difference, finite element, or spectral scheme is used, such a matrix also generates an inconsistency which makes the residuals in the iterative solution to saturate at a threshold level that depends on the spatial resolution and order of the discretization scheme. In this paper, we examine inconsistency for a high-order meshless discretization scheme suitable for solving the equations on a complex domain. The high order meshless method uses polyharmonic spline radial basis functions (PHS-RBF) with appended polynomials to interpolate scattered data and constructs the discrete equations by collocation. The PHS-RBF provides the flexibility to vary the order of discretization by increasing the degree of the appended polynomial. In this study, we examine the convergence of the inconsistency for different spatial resolutions and for different degrees of the appended polynomials by solving the Poisson equation for a manufactured solution as well as the Navier-Stokes equations for several fluid flows. We observe that the inconsistency decreases faster than the error in the final solution, and eventually becomes vanishing small at sufficient spatial resolution. The rate of convergence of the inconsistency is observed to be similar or better than the rate of convergence of the discretization errors. This beneficial observation makes it unnecessary to regularize the Poisson equation by fixing either the mean pressure or pressure at an arbitrary point. A simple point solver such as the SOR is seen to be well-convergent, although it can be further accelerated using multilevel methods.
- Published
- 2022
41. Green Synthesis of Fe Doped TiO2 Nanoparticles Using Aegle marmelos Leaves Extract for the Photocatalytic Degradation of Rhodamine B Dye
- Author
-
Chaudhary, Shivani, Goutam, Surya Pratap, Yadav, Anil Kumar, and Pandey, Gajanan
- Published
- 2023
- Full Text
- View/download PDF
42. Machine learning techniques to predict the dimensionless bearing capacity of circular footing on layered sand under inclined loads
- Author
-
Singh, Surya Pratap and Roy, Amrit Kumar
- Published
- 2023
- Full Text
- View/download PDF
43. De novo assembly, functional annotation and comparative analysis of Withania somnifera leaf and root transcriptomes to identify putative genes involved in the withanolides biosynthesis.
- Author
-
Parul Gupta, Ridhi Goel, Sumya Pathak, Apeksha Srivastava, Surya Pratap Singh, Rajender Singh Sangwan, Mehar Hasan Asif, and Prabodh Kumar Trivedi
- Subjects
Medicine ,Science - Abstract
Withania somnifera is one of the most valuable medicinal plants used in Ayurvedic and other indigenous medicine systems due to bioactive molecules known as withanolides. As genomic information regarding this plant is very limited, little information is available about biosynthesis of withanolides. To facilitate the basic understanding about the withanolide biosynthesis pathways, we performed transcriptome sequencing for Withania leaf (101L) and root (101R) which specifically synthesize withaferin A and withanolide A, respectively. Pyrosequencing yielded 8,34,068 and 7,21,755 reads which got assembled into 89,548 and 1,14,814 unique sequences from 101L and 101R, respectively. A total of 47,885 (101L) and 54,123 (101R) could be annotated using TAIR10, NR, tomato and potato databases. Gene Ontology and KEGG analyses provided a detailed view of all the enzymes involved in withanolide backbone synthesis. Our analysis identified members of cytochrome P450, glycosyltransferase and methyltransferase gene families with unique presence or differential expression in leaf and root and might be involved in synthesis of tissue-specific withanolides. We also detected simple sequence repeats (SSRs) in transcriptome data for use in future genetic studies. Comprehensive sequence resource developed for Withania, in this study, will help to elucidate biosynthetic pathway for tissue-specific synthesis of secondary plant products in non-model plant organisms as well as will be helpful in developing strategies for enhanced biosynthesis of withanolides through biotechnological approaches.
- Published
- 2013
- Full Text
- View/download PDF
44. Shear-Driven Flow in an Elliptical Enclosure Generated by an Inner Rotating Circular Cylinder
- Author
-
Unnikrishnan, Akash, Shahane, Shantanu, Narayan, Vinod, and Vanka, Surya Pratap
- Subjects
Physics - Fluid Dynamics ,Mathematics - Numerical Analysis - Abstract
Shear-driven flow between a rotating cylinder and a stationary elliptical enclosure is studied in this paper. Two-dimensional time-dependent Navier Stokes equations are solved using a meshless method where interpolations are done with Polyharmonic Spline Radial Basis Functions. The fluid flow is analyzed for various aspect ratios of the ellipse and eccentric placements of the inner cylinder. Contour plots of vorticity with streamlines, plots of non-dimensional torque, and the angle of eye of the primary vortex are presented in the paper for Reynolds numbers between 200 and 2000. Formation of Moffatt like vortices in the wide-gap region of the model is observed and some benchmark data are provided for various cases that are simulated.
- Published
- 2021
- Full Text
- View/download PDF
45. Biodegradation of furfuryl alcohol by indigenous Bacillus species of industrial effluent-contaminated sites: estimation, biokinetics and toxicity assessment of bio-transformed metabolites
- Author
-
Singh, Priyaragini, Dilnashin, Hagera, Kumar, Kotnees Dinesh, Singh, Surya Pratap, and Kumar, Rakesh
- Published
- 2024
- Full Text
- View/download PDF
46. Validity of point-mass model in off-resonance dynamic atomic force microscopy
- Author
-
Rajput, Shatruhan Singh, Deopa, Surya Pratap S, Ajith, V. J., Kamerkar, Sukrut C., and Patil, Shivprasad
- Subjects
Condensed Matter - Soft Condensed Matter ,Physics - Biological Physics - Abstract
The quantitative measurement of viscoelasticity of nano-scaleentities is an important goal of nanotechnology research and there is considerable progress with advent of dynamic Atomic Force Microscopy. The hydrodynamics of cantilever, the force sensor in AFM measurements, plays a pivotal role in quantitative estimates of nano-scale viscoelasticity. The point-mass model,wherein the AFM cantilever is approximated as a point mass with mass-less spring is widely used in dynamic AFM analysis and its validity, particularly in liquid environments, is debated. It is suggested that the cantilever must be treated as a continuous rectangular beam to obtain accurate estimates of nano-scale viscoelasticity of materials it is probing. Here, we derived equations, which relate stiffness and damping coefficient of the material under investigation to measured parameters, by approximating cantilever as a point mass and also considering the full geometric details. These equations are derived for both tip-excited as well as base excited cantilevers. We have performed off-resonance dynamic atomic force spectroscopy on a single protein molecule to investigate the validity of widely used point-mass model. We performed measurements with AFMs equipped with different cantilever excitation methods as well as detection schemes to measure cantilever response. The data was analyzed using both, continuous-beam model and the point-mass model. We found that both models yield same results when the experiments are performed in truly off-resonance regime with small amplitudes and the cantilever stiffness is much higher than the interaction stiffness. Our findings suggest that a simple point-mass approximation based model is adequate to describe the dynamics, provided care is taken while performing experiments so that the approximations used in these models are valid.
- Published
- 2021
47. Application of a High Order Accurate Meshless Method to Solution of Heat Conduction in Complex Geometries
- Author
-
Bartwal, Naman, Shahane, Shantanu, Roy, Somnath, and Vanka, Surya Pratap
- Subjects
Mathematics - Numerical Analysis ,Physics - Computational Physics - Abstract
In recent years, a variety of meshless methods have been developed to solve partial differential equations in complex domains. Meshless methods discretize the partial differential equations over scattered points instead of grids. Radial basis functions (RBFs) have been popularly used as high accuracy interpolants of function values at scattered locations. In this paper, we apply the polyharmonic splines (PHS) as the RBF together with appended polynomial and solve the heat conduction equation in several geometries using a collocation procedure. We demonstrate the expected exponential convergence of the numerical solution as the degree of the appended polynomial is increased. The method holds promise to solve several different governing equations in thermal sciences.
- Published
- 2021
48. A Semi-Implicit Meshless Method for Incompressible Flows in Complex Geometries
- Author
-
Shahane, Shantanu and Vanka, Surya Pratap
- Subjects
Mathematics - Numerical Analysis ,Physics - Computational Physics - Abstract
We present an exponentially convergent semi-implicit meshless algorithm for the solution of Navier-Stokes equations in complex domains. The algorithm discretizes partial derivatives at scattered points using radial basis functions as interpolants. Higher-order polynomials are appended to polyharmonic splines (PHS-RBF) and a collocation method is used to derive the interpolation coefficients. The interpolating kernels are then differentiated and the partial-differential equations are satisfied by collocation at the scattered points. The PHS-RBF interpolation is shown to be exponentially convergent with discretization errors decreasing as a high power of a representative distance between points. We present here a semi-implicit algorithm for time-dependent and steady state fluid flows in complex domains. At each time step, several iterations are performed to converge the momentum and continuity equations. A Poisson equation for pressure corrections is formulated by imposing divergence free condition on the iterated velocity field. At each time step, the momentum and pressure correction equations are repeatedly solved until the velocities and pressure converge to a pre-specified tolerance. We have demonstrated the convergence and discretization accuracy of the algorithm for two model problems and simulated three other complex problems. In all cases, the algorithm is stable for Courant numbers in excess of ten. The algorithm has the potential to accurately and efficiently solve many fluid flow and heat transfer problems in complex domains. An open source code Meshless Multi-Physics Software (MeMPhyS) is available for interested users of the algorithm.
- Published
- 2021
49. A Non-Nested Multilevel Method for Meshless Solution of the Poisson Equation in Heat Transfer and Fluid Flow
- Author
-
Radhakrishnan, Anand, Xu, Michael, Shahane, Shantanu, and Vanka, Surya Pratap
- Subjects
Mathematics - Numerical Analysis ,Computer Science - Computational Engineering, Finance, and Science - Abstract
We present a non-nested multilevel algorithm for solving the Poisson equation discretized at scattered points using polyharmonic radial basis function (PHS-RBF) interpolations. We append polynomials to the radial basis functions to achieve exponential convergence of discretization errors. The interpolations are performed over local clouds of points and the Poisson equation is collocated at each of the scattered points, resulting in a sparse set of discrete equations for the unkown variables. To solve this set of equations, we have developed a non-nested multilevel algorithm utilizing multiple independently generated coarse sets of points. The restriction and prolongation operators are also constructed with the same RBF interpolations procedure. The performance of the algorithm for Dirichlet and all-Neumann boundary conditions is evaluated in three model geometries using a manufactured solution. For Dirichlet boundary conditions, rapid convergence is observed using SOR point solver as the relaxation scheme. For cases of all-Neumann boundary conditions, convergence is seen to slow down with the degree of the appended polynomial. However, when the multilevel procedure is combined with a GMRES algorithm, the convergence is seen to significantly improve. The GMRES accelerated multilevel algorithm is included in a fractional step method to solve incompressible Navier-Stokes equations.
- Published
- 2021
50. Large Scale GPU Based Simulations of Turbulent Bubbly Flow in a Square Duct
- Author
-
Kumar, Purushotam and Vanka, Surya Pratap
- Subjects
Physics - Fluid Dynamics - Abstract
In this paper, we present the results of a numerical study of air-water turbulent bubbly flow in a periodic vertical square duct. The study is conducted using a novel numerical technique which leverages Volume of Fluid method for interface capturing and Sharp Surface Force method for accurate representation of the surface tension forces. A three-dimensional geometry construction method is employed during solution of interface equation which gives absolute conservation of mass and sharp interface between gas and liquid phases. The entire algorithm has been implemented on a data parallel mode on multiple graphics processing units (GPU) taking advantage of the large number of available cores. We have studied the dynamics of a swarm of spherical bubbles co-flowing with the upward turbulent flow and compared results with an unladen turbulent flow. The frictional Reynolds number of the unladen $Re_{\tau}$ is 360, which is sufficient to sustain a turbulent flow. We observe the turbulence-driven secondary flows in the mean flow, with complex instantaneous turbulent vortical structures. The interaction of these secondary flows with the upwards rising bubbles is very complex and leads to significant changes in the instantaneous and time-averaged flow field. We present the results of mean void fraction distribution, mean velocities, longitudinal and transverse turbulence intensities along the wall, corner bisector, and wall bisector. A peak in the void fraction distribution near the walls is observed representing the migration of bubbles to a preferred section of the duct. The effects of turbulence-driven secondary flows and instantaneous large eddies on preferential concentration of the bubbles are discussed. The dispersed bubbles are seen to break the long elongated turbulent structures commonly observed in the unladen turbulent flow.
- Published
- 2021
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.