12 results on '"Suntum T"'
Search Results
2. Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides: Understanding Randomness In Clinical Outcomes Following Stem Cell Transplantation
- Author
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Koparde, V, primary, Abdul Razzaq, B, additional, Suntum, T, additional, Sabo, R, additional, Scalora, A, additional, Serrano, M, additional, Jameson-Lee, M, additional, Hall, C, additional, Kobulnicky, D, additional, Sheth, N, additional, Sampson, J, additional, Reed, J, additional, Roberts, C, additional, Qayyum, R, additional, Buck, G, additional, Neale, M, additional, and Toor, A., additional
- Published
- 2016
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3. Molecular distinctions between variant and classic hairy cell leukemia
- Author
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Arons, E., primary, Suntum, T., additional, Sunshine, J., additional, Orthwein, A., additional, Margulies, I., additional, Stetler-Stevenson, M., additional, and Kreitman, R. J., additional
- Published
- 2008
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4. Multilevel Facilitators and Barriers to Healthcare Organization and Delivery Among Childhood Cancer Survivors.
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Miller BM, Yockel MR, Appel BE, Dash C, Harris-Hollingsworth N, Kadan Lottick NS, Potosky AL, Rowland J, Suntum T, Chaillet K, Sleiman MM Jr, Statman MR, and Tercyak KP
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- Humans, Female, Male, Child, Adult, Follow-Up Studies, Health Services Accessibility, Social Determinants of Health, Adolescent, Cancer Survivors psychology, Delivery of Health Care, Neoplasms therapy, Neoplasms psychology
- Abstract
Background: Childhood cancer survivors (CCS) are at risk for medical and psychosocial late effects of their disease and its treatment and are recommended to receive annual follow-ups. Yet, rates of follow-up adherence are suboptimal and may be influenced by the organization and delivery of their healthcare. This research aimed to examine experts' perceptions of facilitators and barriers to healthcare organization and delivery to CCS., Procedure: Thirty-one clinicians and administrators in a comprehensive cancer center's research consortium were interviewed about system-level factors that may promote or deter annual follow-ups among CCS. Interview transcripts were coded and inductively analyzed using a study-specific scheme., Results: Three main themes were identified: (1) healthcare system influences (59%); (2) social determinants of health (25%); and (3) intra/interpersonal factors (16%). Prominent subthemes included age-related changes in the transition of healthcare responsibility that disrupt ongoing CCS care (28.1%), the breadth and quality of psychosocial support available to navigate CCS to follow-up (13.5%), and transportation challenges (24.6%; especially in low-resource areas). In contrast, community trust facilitated follow-up (17.3%)., Conclusion: The system of healthcare was prominent in receipt of follow-up by CCS, and further influenced by social determinants of health and intra/interpersonal factors. Easing transitions of responsibility (from parents to CCS, and acute care to survivorship teams) may be beneficial, especially when social determinants of health obstacles are present. Psychosocial wrap-around care is essential, along with promoting staff awareness of obstacles that CCS encounter in low-resource communities., (© 2024 Wiley Periodicals LLC.)
- Published
- 2025
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5. Second primary rhabdomyosarcoma of the uterine cervix presenting with synchronous ovarian Sertoli-Leydig cell tumor: An illustrative case of DICER1 syndrome.
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Cowan M, Suntum T, Olivas AD, Perpich M, Applebaum MA, Lastra RR, and Yamada SD
- Abstract
•Embryonal rhabdomyosarcoma of the uterine cervix and ovarian Sertoli-Leydig cell tumors are associated with DICER1 mutation• DICER1 -associated tumors should prompt genetic counseling and testing•Somatic and germline genetic mutation profiles can be used to differentiate second primary from recurrent tumors.
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- 2018
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6. Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation.
- Author
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Koparde V, Abdul Razzaq B, Suntum T, Sabo R, Scalora A, Serrano M, Jameson-Lee M, Hall C, Kobulnicky D, Sheth N, Feltz J, Contaifer D Jr, Wijesinghe D, Reed J, Roberts C, Qayyum R, Buck G, Neale M, and Toor A
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- Humans, Cell Transplantation, Models, Theoretical, Peptides immunology, Stem Cell Transplantation, T-Lymphocytes immunology, Exome Sequencing
- Abstract
Quantitative relationship between the magnitude of variation in minor histocompatibility antigens (mHA) and graft versus host disease (GVHD) pathophysiology in stem cell transplant (SCT) donor-recipient pairs (DRP) is not established. In order to elucidate this relationship, whole exome sequencing (WES) was performed on 27 HLA matched related (MRD), & 50 unrelated donors (URD), to identify nonsynonymous single nucleotide polymorphisms (SNPs). An average 2,463 SNPs were identified in MRD, and 4,287 in URD DRP (p<0.01); resulting peptide antigens that may be presented on HLA class I molecules in each DRP were derived in silico (NetMHCpan ver2.0) and the tissue expression of proteins these were derived from determined (GTex). MRD DRP had an average 3,670 HLA-binding-alloreactive peptides, putative mHA (pmHA) with an IC50 of <500 nM, and URD, had 5,386 (p<0.01). To simulate an alloreactive donor cytotoxic T cell response, the array of pmHA in each patient was considered as an operator matrix modifying a hypothetical cytotoxic T cell clonal vector matrix; each responding T cell clone's proliferation was determined by the logistic equation of growth, accounting for HLA binding affinity and tissue expression of each alloreactive peptide. The resulting simulated organ-specific alloreactive T cell clonal growth revealed marked variability, with the T cell count differences spanning orders of magnitude between different DRP. Despite an estimated, uniform set of constants used in the model for all DRP, and a heterogeneously treated group of patients, higher total and organ-specific T cell counts were associated with cumulative incidence of moderate to severe GVHD in recipients. In conclusion, exome wide sequence differences and the variable alloreactive peptide binding to HLA in each DRP yields a large range of possible alloreactive donor T cell responses. Our findings also help understand the apparent randomness observed in the development of alloimmune responses.
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- 2017
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7. Remembering MUDPILES: A Case of Unexplained Metabolic Acidosis.
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Suntum T, Allen N, Pagano S, Jaworski ML, Duncan L, and Lee CC
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- Acid-Base Equilibrium, Child, Diagnosis, Differential, Disease Management, Ethnicity, Female, Growth Disorders diagnosis, Growth Disorders etiology, Humans, Hydrogen-Ion Concentration, Intellectual Disability diagnosis, Intellectual Disability etiology, Muscle Spasticity diagnosis, Muscle Spasticity etiology, Mutation, Acidosis diagnosis, Acidosis etiology, Acidosis metabolism, Acidosis therapy, Diet, Ketogenic methods, Pyruvate Dehydrogenase Complex genetics, Pyruvate Dehydrogenase Complex Deficiency Disease complications, Pyruvate Dehydrogenase Complex Deficiency Disease metabolism, Pyruvate Dehydrogenase Complex Deficiency Disease physiopathology, Pyruvate Dehydrogenase Complex Deficiency Disease therapy
- Abstract
Competing Interests: POTENTIAL CONFLICT OF INTEREST: The authors have indicated they have no potential conflicts of interest to disclose.
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- 2017
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8. Evidence of canonical somatic hypermutation in hairy cell leukemia.
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Arons E, Roth L, Sapolsky J, Suntum T, Stetler-Stevenson M, and Kreitman RJ
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- B-Lymphocytes immunology, Base Pairing, Complementarity Determining Regions genetics, DNA, Neoplasm genetics, Gene Rearrangement, B-Lymphocyte, Heavy Chain, Humans, Immunoglobulin Variable Region genetics, Leukemia, Lymphocytic, Chronic, B-Cell genetics, Leukemia, Lymphocytic, Chronic, B-Cell immunology, Leukemia, Hairy Cell genetics, Leukemia, Hairy Cell immunology, Somatic Hypermutation, Immunoglobulin
- Abstract
To compare hairy cell leukemia (HCL) with chronic lymphocytic leukemia (CLL) and normal B cells with respect to their B-cell receptors, somatic hypermutation (SHM) features in HCL were examined in a series of 130 immunoglobulin gene heavy chain rearrangements, including 102 from 100 classic (HCLc) and 28 from 26 variant (HCLv) patients. The frequency of unmutated rearrangements in HCLc was much lower than that in HCLv (17% vs 54%, P < .001) or historically in CLL (17% vs 46%, P < .001), but HCLv and CLL were similar (P = .45). As previously reported for CLL, evidence of canonical SHM was observed in HCLc rearrangements, including: (1) a higher ratio of replacement to silent mutations in the complementarity determining regions than in the framework regions (2.83 vs 1.41, P < .001), (2) higher transition to transversion ratio than would be expected if mutations were random (1.49 vs 0.5, P < .001), and (3) higher than expected concentration of mutations within RGYW hot spots (13.92% vs 3.33%, P < .001). HCLv met these 3 criteria of canonical SHM to a lesser extent. These data suggest that, whereas HCLc cells may recognize antigen-like CLL and normal B cells before malignant transformation, HCLv cells from some patients may originate differently, possibly without undergoing antigen recognition.
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- 2011
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9. VH4-34+ hairy cell leukemia, a new variant with poor prognosis despite standard therapy.
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Arons E, Suntum T, Stetler-Stevenson M, and Kreitman RJ
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- Adult, Aged, Female, Gene Rearrangement, B-Lymphocyte, Humans, Kaplan-Meier Estimate, Leukemia, Hairy Cell mortality, Male, Middle Aged, Prognosis, Antineoplastic Agents therapeutic use, Cladribine therapeutic use, Complementarity Determining Regions genetics, Immunoglobulin Heavy Chains genetics, Leukemia, Hairy Cell drug therapy, Leukemia, Hairy Cell genetics
- Abstract
Hairy cell leukemia variant (HCLv) presents with high disease burden, lack of typical antigens like CD25, and poor response to standard treatments like cladribine. Occasionally, patients with classic HCL respond poorly. Clinical and molecular features of HCL and HCLv has not been compared. Rearrangements expressing immunoglobulin VH chain were sequenced, including 22 from 20 patients with HCLv and 63 from 62 patients with classic HCL. Most patients were seeking relapsed/refractory trials, representing a poor-prognosis population. VH4-34, a gene commonly used in autoimmune disorders, was observed in 8 (40%) HCLv and 6 (10%) classic (P = .004) HCL patients. Compared with 71 VH4-34(-) rearrangements, 14 VH4-34(+) rearrangements were more frequently (P < .001) unmutated, defined as greater than 98% homologous to germline sequence. VH4-34(+) patients had greater white blood cell counts at diagnosis (P = .002), lower response rate (P < .001) and progression-free survival (P = .007) after initial cladribine, and shorter overall survival from diagnosis (P < .001). Response and survival were more closely related to VH4-34 status than to whether or not patients had HCLv. VH4-34(+) HCL is an important disorder that only partly overlaps with the previously described HCLv. Response to initial single-agent cladribine therapy is suboptimal; these patients should be considered for alternative approaches, including antibody-related therapy.
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- 2009
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10. PRAME expression in hairy cell leukemia.
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Arons E, Suntum T, Margulies I, Yuan C, Stetler-Stevenson M, and Kreitman RJ
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- Antigens, Neoplasm metabolism, Biomarkers, Tumor metabolism, Case-Control Studies, Flow Cytometry, Humans, Leukemia, Hairy Cell metabolism, Leukemia, Lymphocytic, Chronic, B-Cell genetics, Leukemia, Lymphocytic, Chronic, B-Cell metabolism, Lymphoma, Follicular genetics, Lymphoma, Follicular metabolism, RNA, Messenger genetics, RNA, Messenger metabolism, Reverse Transcriptase Polymerase Chain Reaction, Antigens, Neoplasm genetics, Biomarkers, Tumor genetics, Gene Expression Regulation, Leukemic, Leukemia, Hairy Cell genetics
- Abstract
PRAME has been proposed as a useful marker for solid tumors and acute B-cell malignancies. Several studies demonstrate expression in CLL. To further examine its B-cell tumor distribution, we studied PRAME in both CLL and hairy cell leukemia (HCL). While by conventional PCR only 8% of 37 HCL and 27% of 22 CLL patients were positive, nearly all patients and normal donors expressed PRAME by real-time quantitative (TaqMan) PCR. We conclude that HCL and CLL differ in PRAME overexpression, and that basal normal expression of PRAME may limit its usefulness for following patients with minimal residual CLL or HCL.
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- 2008
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11. Immunoglobulin light chain repertoire in hairy cell leukemia.
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Arons E, Suntum T, Sunshine J, Stetler-Stevenson M, and Kreitman RJ
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- Flow Cytometry, Humans, Gene Rearrangement, B-Lymphocyte, Light Chain genetics, Immunoglobulin Light Chains genetics, Immunoglobulin Variable Region genetics, Immunoglobulin kappa-Chains genetics, Leukemia, Hairy Cell genetics
- Abstract
Of 166 hairy cell leukemia (HCL) patients, 81 had kappa and 80 had lambda expression. IGKV-J and IGLV-J rearrangement structure was analyzed in 21 HCL patients (11 kappa, 10 lambda). For kappa, IGKV1-5 was most frequent, and the KJ2 gene was over-utilized. For lambda HCL, LJ3 was over-utilized compared to normal. This study significantly adds to previous studies of light chain usage in HCL and is the first to report light chain gene usage. In HCL, we confirm the lack of kappa predominance observed in normal lymphocytes and in chronic lymphocytic leukemia, and note over-representation of several light chain genes.
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- 2007
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12. Somatic hypermutation and VH gene usage in hairy cell leukaemia.
- Author
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Arons E, Sunshine J, Suntum T, and Kreitman RJ
- Subjects
- Base Sequence, Gene Expression Regulation, Leukemic genetics, Gene Rearrangement, B-Lymphocyte, Heavy Chain genetics, Germ-Line Mutation genetics, Humans, Immunoglobulin Heavy Chains genetics, Immunoglobulin Variable Region genetics, Mutation genetics, Sequence Homology, Nucleic Acid, Somatic Hypermutation, Immunoglobulin genetics, Genes, Immunoglobulin Heavy Chain genetics, Leukemia, Hairy Cell genetics
- Abstract
To examine the usage and mutational status of VH genes in hairy cell leukaemia (HCL), we analysed 24 immunoglobulin heavy chain (IgH) sequences expressed in 23 patients. None had premature stop codons. VH3-23 was the most common gene and a VH6 gene was observed for the first time in HCL. Although the mean mutation frequency was 6.1%, slightly higher than in previous HCL series, four patients had 99.6-100% homology to germline sequences, three of whom had high tumour burdens and poor outcomes. Despite the high mutation frequency, only two of 24 rearrangements had clear statistical evidence of antigen-dependent somatic mutation. Our results increase the database of reported functional HCL rearrangements to 94 in 92 patients. Overall, both gene usage and mutation frequency are very similar to mucosa-associated lymphoid tissue-type marginal zone lymphoma. The data are consistent with HCL originating from post-germinal centre marginal zone B cells, although the heterogeneity observed suggests that HCL may originate differently in some patients, and this could have implications for prognosis and treatment.
- Published
- 2006
- Full Text
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