134 results on '"Sunkyu Choi"'
Search Results
2. Mass spectrometry-based proteomic profiling of extracellular vesicle proteins in diabetic and non-diabetic ischemic stroke patients: a case-control study
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Shahnaz Qadri, Muhamad U. Sohail, Naveed Akhtar, Ghulam Jeelani Pir, Ghada Yousif, Sajitha V. Pananchikkal, Muna Al-Noubi, Sunkyu Choi, Ashfaq Shuaib, Yousef Haik, Aijaz Parray, and Frank Schmidt
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extracellular vesicles (EVs) ,diabetes ,stroke ,exosomes ,mass spectrometry ,blood coagulation ,Biology (General) ,QH301-705.5 - Abstract
Acute ischemic stroke is the most common cause of neurologic dysfunction caused by focal brain ischemia and tissue injury. Diabetes is a major risk factor of stroke, exacerbating disease management and prognosis. Therefore, discovering new diagnostic markers and therapeutic targets is critical for stroke prevention and treatment. Extracellular vesicles (EVs), with their distinctive properties, have emerged as promising candidates for biomarker discovery and therapeutic application. This case-control study utilized mass spectrometry-based proteomics to compare EVs from non-diabetic stroke (nDS = 14), diabetic stroke (DS = 13), and healthy control (HC = 12) subjects. Among 1288 identified proteins, 387 were statistically compared. Statistical comparisons using a general linear model (log2 foldchange ≥0.58 and FDR-p≤0.05) were performed for nDS vs HC, DS vs HC, and DS vs nDS. DS vs HC and DS vs nDS comparisons produced 123 and 149 differentially expressed proteins, respectively. Fibrinogen gamma chain (FIBG), Fibrinogen beta chain (FIBB), Tetratricopeptide repeat protein 16 (TTC16), Proline rich 14-like (PR14L), Inhibitor of nuclear factor kappa-B kinase subunit epsilon (IKKE), Biorientation of chromosomes in cell division protein 1-like 1 (BD1L1), and protein PR14L exhibited significant differences in the DS group. The pathway analysis revealed that the complement system pathways were activated, and blood coagulation and neuroprotection were inhibited in the DS group (z-score ≥2; p ≤ 0.05). These findings underscore the potential of EVs proteomics in identifying biomarkers for stroke management and prevention, warranting further clinical investigation.
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- 2024
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3. The Effect of COVID–19 on Pediatric Intussusception: A Retrospective Study of a Single Center in South Korea with 10–Year Experience
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Yeo Jin Yoo, Bo-Kyung Je, Ga Young Choi, Jee Hyun Lee, Sunkyu Choi, and Ji Young Lee
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intussusception ,pediatrics ,enema ,covid-19 ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Purpose To evaluate the effect of the emergence of coronavirus disease-19 (COVID-19) on pediatric intussusception. Materials and Methods Patients (< 18 years) who were diagnosed with intussusception and received enema reduction from 2011 to 2020 were included. We reviewed the demographics, yearly/monthly/seasonal incidence of intussusception, method and failure rate of enema reduction, recurrence rate of intussusception, surgical record, and pathologic report. Subsequently, we investigated the differences in mean age, failure rate of enema reduction, and recurrence rate of intussusception between the cases in 2020 and those in the period from 2011 to 2019. Results A total of 859 enema reductions were performed during the past decade, more in males and in the age < 1 year (mean age, 22.2 months). The yearly incidence was highest in 2014 and lowest in 2020, and the monthly incidence was highest on December and September. The cases in 2020 (n = 27) had a lower mean age (18.1 months vs. 22.8 months), higher failure rate of enema reduction (7.4% vs. 2.4%), and higher recurrence rate of intussusception (14.8% vs 7.3%) compared with those that occurred between 2011 and 2019 (n = 832). However, these results did not show statistical significance (p = 0.07, p = 0.15, p = 0.14, respectively). Conclusion With the emergence of COVID-19, the number of enema reductions was remarkably decreased with a lower mean age, higher failure rate, and higher recurrence rate.
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- 2022
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4. Epidemiology and Long-Term Adverse Outcomes in Korean Patients with Congenital Adrenal Hyperplasia: A Nationwide Study
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Jung Hee Kim, Sunkyu Choi, Young Ah Lee, Juneyoung Lee, and Sin Gon Kim
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adrenal hyperplasia, congenital ,epidemiology ,long term adverse effects ,comorbidity ,mortality ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Background Previous studies on the epidemiology and complications of congenital adrenal hyperplasia (CAH) were conducted in Western countries and in children/adolescents. We aimed to explore the epidemiology of CAH, as well as the risk of comorbidities and mortality, in a Korean nationwide case-control study. Methods CAH patients (n=2,840) were included between 2002 and 2017 from the National Health Insurance Service database and the Rare Intractable Disease program. CAH patients were compared, at a 1:10 ratio, with age-, sex-, and index year-matched controls (n=28,400). Results The point prevalence of CAH patients in Korea was 1 in 18,745 persons in 2017. The annual incidence rate declined between 2003 and 2017 from 3.25 to 0.41 per 100,000 persons. CAH patients were at elevated risk for cardiovascular disease (odds ratio [OR], 1.6; 95% confidence interval [CI], 1.4 to 1.9), stroke (OR, 1.7; 95% CI, 1.3 to 2.0), diabetes mellitus (OR, 2.8; 95% CI, 2.6 to 3.1), dyslipidemia (OR, 2.4; 95% CI, 2.2 to 2.6), and psychiatric disorders (OR, 1.5; 95% CI, 1.3 to 1.6). Fracture risk increased in CAH patients aged over 40 years (OR, 1.4; 95% CI, 1.1 to 1.7). CAH patients were at higher risk of mortality than controls (hazard ratio, 1.6; 95% CI, 1.3 to 2.0). Conclusion Our nationwide study showed a recent decline in the incidence of CAH and an elevated risk for cardiovascular, metabolic, skeletal, and psychiatric disorders in CAH patients. Lifelong management for comorbidity risk is a crucial component of treating CAH patients.
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- 2022
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5. ACBD3 modulates KDEL receptor interaction with PKA for its trafficking via tubulovesicular carrier
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Xihua Yue, Yi Qian, Lianhui Zhu, Bopil Gim, Mengjing Bao, Jie Jia, Shuaiyang Jing, Yijing Wang, Chuanting Tan, Francesca Bottanelli, Pascal Ziltener, Sunkyu Choi, Piliang Hao, and Intaek Lee
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KDEL receptor ,Protein Kinase A ,ACBD3 ,ArfGAPs ,Arf1-GTP ,Golgi ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background KDEL receptor helps establish cellular equilibrium in the early secretory pathway by recycling leaked ER-chaperones to the ER during secretion of newly synthesized proteins. Studies have also shown that KDEL receptor may function as a signaling protein that orchestrates membrane flux through the secretory pathway. We have recently shown that KDEL receptor is also a cell surface receptor, which undergoes highly complex itinerary between trans-Golgi network and the plasma membranes via clathrin-mediated transport carriers. Ironically, however, it is still largely unknown how KDEL receptor is distributed to the Golgi at steady state, since its initial discovery in late 1980s. Results We used a proximity-based in vivo tagging strategy to further dissect mechanisms of KDEL receptor trafficking. Our new results reveal that ACBD3 may be a key protein that regulates KDEL receptor trafficking via modulation of Arf1-dependent tubule formation. We demonstrate that ACBD3 directly interact with KDEL receptor and form a functionally distinct protein complex in ArfGAPs-independent manner. Depletion of ACBD3 results in re-localization of KDEL receptor to the ER by inducing accelerated retrograde trafficking of KDEL receptor. Importantly, this is caused by specifically altering KDEL receptor interaction with Protein Kinase A and Arf1/ArfGAP1, eventually leading to increased Arf1-GTP-dependent tubular carrier formation at the Golgi. Conclusions These results suggest that ACBD3 may function as a negative regulator of PKA activity on KDEL receptor, thereby restricting its retrograde trafficking in the absence of KDEL ligand binding. Since ACBD3 was originally identified as PAP7, a PBR/PKA-interacting protein at the Golgi/mitochondria, we propose that Golgi-localization of KDEL receptor is likely to be controlled by its interaction with ACBD3/PKA complex at steady state, providing a novel insight for establishment of cellular homeostasis in the early secretory pathway.
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- 2021
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6. Trajectories in glycated hemoglobin and body mass index in children and adolescents with diabetes using the common data model
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Yun Jeong Lee, Sooyoung Yoo, Soyoung Yi, Seok Kim, Chunggak Lee, Jihoon Cho, Soyeon Ahn, Sunkyu Choi, Hee Hwang, Young Ah Lee, Choong Ho Shin, Hyung-Jin Yoon, Kwangsoo Kim, Eunhye Song, Jin Ho Choi, Han Wook Yoo, Young-Hak Kim, Ji Seon Oh, Eun-Ae Kang, Ga Kyoung Baek, and Jae Hyun Kim
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Medicine ,Science - Abstract
Abstract We evaluated trajectories of glycated hemoglobin (HbA1c) levels and body mass index z-scores (BMIz) for 5 years after diagnosis among Korean children and adolescents with type 1 diabetes (T1D) or type 2 diabetes (T2D) using the common data model. From the de-identified database of three hospitals, 889 patients
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- 2021
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7. Helicobacter pylori Eradication Induced Constant Decrease in Interleukin- 1B Expression over More Than 5 Years in Patients with Gastric Cancer and Dysplasia
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Hee Jin Kim, Nayoung Kim, Ji Hyun Park, Sunkyu Choi, Cheol Min Shin, and Ok Jae Lee
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helicobacter pylori ,interleukin-1 beta ,gastric acid ,h(+)-k(+)-exchanging atpase ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background/Aims: Helicobacter pylori (Hp) suppresses gastric acid secretion by repressing the expression of the H+, K+-adenosine triphosphatase (H+, K+-ATPase) and stimulating interleukin-1 (IL-1β; encoded by IL-1B). This study was aimed at evaluating the expression of the H+, K+-ATPase and IL-1β after Hp eradication. Methods: Two hundred twentyone subjects were categorized as Hp-negative (n=84) or Hppositive (n=137) according to the results of Hp tests (histology, CLO test, culturing, and serology). The mRNA expression levels of IL-1B and ATP4A (the gene encoding the α-subunit of H+, K+-ATPase) were measured in biopsy specimens from the gastric corpus using real-time polymerase chain reaction. Results: The Hp-positive group had significantly higher IL-1B mRNA levels than the whole Hp-negative group and the intestinal metaplasia (IM)-negative subgroup. After Hp eradication, the difference between the Hp-negative and Hperadicated groups disappeared, including in the IM-negative subgroup. The IL-1B mRNA level did not significantly change from the baseline level. Within the gastric cancer (GC)/dysplasia subgroup, the IL-1B mRNA levels at 1, 2, 3-4, and ≥5 years after Hp eradication were significantly lower than the baseline level. The difference in ATP4A mRNA levels between the Hp-negative and Hp-positive groups was not significant at baseline, and the changes in the ATP4A mRNA levels after Hp eradication compared to the baseline levels in the whole group and subgroups stratified by the presence of IM and GC/dysplasia were not significant. Conclusions: Infection with Hp has an effect on the level of IL-1B mRNA in IM-negative subjects. The continuous reduction in the IL-1B mRNA level in patients with GC/dysplasia after Hp eradication contributes to the prevention of metachronous GC after Hp eradication.
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- 2020
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8. Quality of life after sphincter preservation surgery or abdominoperineal resection for low rectal cancer (ASPIRE): A long-term prospective, multicentre, cohort study
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Sung-Bum Kang, Jung Rae Cho, Seung-Yong Jeong, Jae Hwan Oh, Soyeon Ahn, Sunkyu Choi, Duck-Woo Kim, Bong Hwa Lee, Eui Gon Youk, Sung Chan Park, Seung Chul Heo, Doo-Seok Lee, Seung-Bum Ryoo, Ji Won Park, Hyoung-Chul Park, Sung-Min Lee, Sung Il Kang, Min Hyun Kim, Heung-Kwon Oh, Rumi Shin, Min Jung Kim, Kyoung Ho Lee, Young-Hoon Kim, Jae-Sung Kim, Keun-Wook Lee, Hye Seung Lee, Hyun Jung Kim, Young Soo Park, Dae Kyung Sohn, and Kyu Joo Park
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Quality of life ,Rectal cancer ,Abdominoperineal resection ,Sphincter preservation surgery ,Sexual function ,Urinary function ,Public aspects of medicine ,RA1-1270 - Abstract
Summary: Background: The long-term effects of radical resection on quality of life may influence the treatment selection. The objective of this study was to determine whether abdominoperineal resection has a better effect on the quality of life than sphincter preservation surgery at 3 years after surgery Methods: This prospective, cohort study included patients who underwent radical resection for low rectal cancer. The primary outcomes were European Organisation for Research and Treatment of Cancer QLQ-C30 and CR38 quality of life scores 3 years after surgery, which were compared with linear generalised estimating equations, after adjustment for baseline values, a time effect, and an interaction effect between time and treatment. The secondary outcomes included sexual-urinary functions and oncological outcomes. The study was registered with ClinicalTrials.gov (NCT01461525). Findings: Between December 2011 and August 2016, 342 patients were enrolled: 268 (78•4%) underwent sphincter preservation surgery and 74 (21•6%) underwent abdominoperineal resection. The global quality of life scores did not differ between sphincter preservation surgery and abdominoperineal resection groups (adjusted mean difference, 4•2 points on a 100-point scale; 95% confidence interval [CI], −1•3 to 9•7, p = 0•1316). Abdominoperineal resection was associated with a worse body image (9•8 points; 95% CI, 2•9 to 16•6, p = 0•0052), micturition symptoms (−8•0 points; 95% CI, -14•1 to −1•8, p = 0•0108), male sexual problems (−19•9 points; 95% CI, -33•1 to -6•7, p = 0•0032), less confidence in getting and maintaining an erection in males (0•5 points on a 5-point scale; 95% CI, 0•1 to 0•8, p = 0•0155), and worse urinary symptoms (−5•4 points on a 35-point scale; 95% CI, −8•0 to −2•7, p
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- 2021
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9. Impact of acute kidney injury on graft outcomes of deceased donor kidney transplantation: A nationwide registry-based matched cohort study in Korea
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Jane Ha, Cheol Woong Jung, Sunkyu Choi, Myung-Gyu Kim, Jun Gyo Gwon, Joong Kyung Kim, Chan-Duck Kim, Ji Won Min, Jaeseok Yang, Curie Ahn, and on behalf of the Korean Organ Transplantation Registry Study group
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Medicine ,Science - Abstract
Background Favorable long-term and short-term graft survival and patient survival after kidney transplantation (KT) from deceased donors with acute kidney injury (AKI) have been reported. However, few studies have evaluated effects of donor AKI status on graft outcomes after KT in Asian population. Thus, the purpose of this study was to evaluate graft function after KTs from donors with AKI compared to matched KTs from donors without AKI using a multicenter cohort in Korea. Methods We analyzed a total of 1,466 KTs collected in Korean Organ Transplant Registry between April 2014 and December 2017. KTs from AKI donors (defined as donors with serum creatinine level ≥ 2 mg/dL) and non-AKI donors (275 cases for each group) were enrolled using a 1:1 propensity score matching. Graft outcomes including graft and patient survival, delayed graft function (DGF), rejection rate, and serially measured estimated glomerular filtration rate (eGFR) were evaluated. Results After propensity matching, KTs from AKI donors showed higher rate of DGF (44.7% vs. 24.0%, p < 0.001). However, the rejection rate was not significantly different between the two groups (KTs from AKI donors vs. KTs from non-AKI donors). eGFRs measured after 6 months, 1 year, 2 years and 3 years were not significantly different by donor AKI status. With median follow-up duration of 3.52 years, cox proportional hazards models revealed hazard ratio of 0.973 (95% confidence interval [CI], 0.584 to 1.621), 1.004 (95% CI, 0.491 to 2.054) and 0.808 (95% confidence interval [CI], 0.426 to 1.532) for overall graft failure, death-censored graft failure and patient mortality, respectively, in KTs from AKI donors compared to KTs from non-AKI donors as a reference. Conclusions KTs from AKI donors showed comparable outcomes to KTs from non-AKI donors, despite a higher incidence of DGF. Results of this study supports the validity of using kidneys from deceased AKI donors in Asian population.
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- 2021
10. 3D Culture Protocol for Testing Gene Knockdown Efficiency and Cell Line Derivation
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Jan Strnadel, Sang Woo, Sunkyu Choi, Huawei Wang, Marian Grendar, and Ken Fujimura
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Biology (General) ,QH301-705.5 - Abstract
Traditional 2D cell cultures with cells grown as monolayers on solid surface still represent the standard method in cancer research for drug testing. Cells grown in 2D cultures, however, lack relevant cell-matrix and cell-cell interactions and ignore the true three-dimensional anatomy of solid tumors. Cells cultured in 2D can also undergo cytoskeletal rearrangements and acquire artificial polarity associated with aberrant gene expression (Edmondson et al., 2014). 3D culture systems that better mimic the in vivo situation have been developed recently. 3D in vitro cancer models (tumorspheres) for studying cancer stem cells have gained increased popularity in the field (Weiswald et al., 2015). Systems that use matrix-embedded or encapsulated spheroids, spheroids cultured in hanging drops, magnetic levitation systems or 3D printing methods are already being widely used in research and for novel drug screening. In this article, we describe a detailed protocol for testing the effect of shRNA-mediated gene silencing on tumorsphere formation and growth. This approach allows researchers to test the impact of gene knockdown on the growth of tumor initiating cells. As verified by our lab, the protocol can be also used for isolation of 3D cancer cell lines directly from tumor tissues.
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- 2018
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11. Mass spectrometry-based proteomic profiling of extracellular vesicle proteins in diabetic and non-diabetic ischemic stroke patients: a casecontrol study.
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Qadri, Shahnaz, Sohail, Muhamad U., Akhtar, Naveed, Pir, Ghulam Jeelani, Yousif, Ghada, Pananchikkal, Sajitha V., Al-Noubi, Muna, Sunkyu Choi, Shuaib, Ashfaq, Haik, Yousef, Parray, Aijaz, and Schmidt, Frank
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- 2024
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12. Bulk CMOS Low Noise Amplifier With Two Stage HPF Noise Matching Structure
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Jeong-Taek Lim, Han-Woong Choi, Sunkyu Choi, Ki-Jin Kim, Hi-Deok Lee, Hyoungho Ko, and Choul-Young Kim
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Electrical and Electronic Engineering - Published
- 2023
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13. Highly Linear Ka-Band CMOS Linear Power Amplifier Using T-Shape Linearizer With pMOS
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Han-Woong Choi, Sunkyu Choi, Jeong-Taek Lim, and Choul-Young Kim
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- 2023
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14. Comprehensive Characterization of Protein Turnover by Comparative SILAC Labeling Analysis in 3T3-L1
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Sunkyu Choi, Atilio Reyes Romero, Fathima Mashood, Neha Goswami, Lotfi Chouchane, and Frank Schmidt
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General Chemistry ,Biochemistry - Published
- 2023
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15. Figure S4 from eIF5A-PEAK1 Signaling Regulates YAP1/TAZ Protein Expression and Pancreatic Cancer Cell Growth
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Richard L. Klemke, Kun-Liang Guan, Michael Bouvet, Jonathan Kelber, Jack Bui, Hyun Woo Park, Carlos Peinado, Emilie Gross, Tracy Wright, Meghan Wyse, Wei Zhang, Huawei Wang, Ken Fujimura, Sunkyu Choi, and Jan Strnadel
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Western blots showing PEAk1 and YAP1 depletion in PDAC cells treated with two independent shRNAs
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- 2023
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16. Table S3 from eIF5A-PEAK1 Signaling Regulates YAP1/TAZ Protein Expression and Pancreatic Cancer Cell Growth
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Richard L. Klemke, Kun-Liang Guan, Michael Bouvet, Jonathan Kelber, Jack Bui, Hyun Woo Park, Carlos Peinado, Emilie Gross, Tracy Wright, Meghan Wyse, Wei Zhang, Huawei Wang, Ken Fujimura, Sunkyu Choi, and Jan Strnadel
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List of PEAK1 regulated proteins involved in cytoskeleton organization
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- 2023
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17. Data from eIF5A-PEAK1 Signaling Regulates YAP1/TAZ Protein Expression and Pancreatic Cancer Cell Growth
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Richard L. Klemke, Kun-Liang Guan, Michael Bouvet, Jonathan Kelber, Jack Bui, Hyun Woo Park, Carlos Peinado, Emilie Gross, Tracy Wright, Meghan Wyse, Wei Zhang, Huawei Wang, Ken Fujimura, Sunkyu Choi, and Jan Strnadel
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In pancreatic ductal adenocarcinoma (PDAC), mutant KRAS stimulates the translation initiation factor eIF5A and upregulates the focal adhesion kinase PEAK1, which transmits integrin and growth factor signals mediated by the tumor microenvironment. Although eIF5A-PEAK1 signaling contributes to multiple aggressive cancer cell phenotypes, the downstream signaling processes that mediate these responses are uncharacterized. Through proteomics and informatic analyses of PEAK1-depleted PDAC cells, we defined protein translation, cytoskeleton organization, and cell-cycle regulatory pathways as major pathways controlled by PEAK1. Biochemical and functional studies revealed that the transcription factors YAP1 and TAZ are key targets of eIF5A-PEAK1 signaling. YAP1/TAZ coimmunoprecipitated with PEAK1. Interfering with eIF5A-PEAK1 signaling in PDAC cells inhibited YAP/TAZ protein expression, decreasing expression of stem cell–associated transcription factors (STF) including Oct4, Nanog, c-Myc, and TEAD, thereby decreasing three-dimensional (3D) tumor sphere growth. Conversely, amplified eIF5A-PEAK1 signaling increased YAP1/TAZ expression, increasing expression of STF and enhancing 3D tumor sphere growth. Informatic interrogation of mRNA sequence databases revealed upregulation of the eIF5A-PEAK1-YAP1-TEAD signaling module in PDAC patients. Taken together, our findings indicate that eIF5A-PEAK1-YAP signaling contributes to PDAC development by regulating an STF program associated with increased tumorigenicity. Cancer Res; 77(8); 1997–2007. ©2017 AACR.
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- 2023
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18. Flavin Adenine Dinucleotide (FAD) and Pyridoxal 5′-Phosphate (PLP) Bind to Sox9 and Alter the Expression of Key Pancreatic Progenitor Transcription Factors
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Zeyaul Islam, Noura Aldous, Sunkyu Choi, Frank Schmidt, Borbala Mifsud, Essam M. Abdelalim, and Prasanna R. Kolatkar
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Riboflavin ,Organic Chemistry ,General Medicine ,Vitamins ,Pancreatic Hormones ,Catalysis ,Computer Science Applications ,Phosphates ,Inorganic Chemistry ,pancreatic progenitors ,Sox9 ,FAD ,PLP ,transcription factor ,Sox family ,Pyridoxal Phosphate ,Flavin-Adenine Dinucleotide ,Physical and Theoretical Chemistry ,Molecular Biology ,Pancreas ,Spectroscopy - Abstract
Cofactor flavin adenine dinucleotide (FAD), a compound with flavin moiety and a derivative of riboflavin (vitamin B2), is shown to bind to Sox9 (a key transcription factor in early pancreatic development) and, subsequently, induce a large increase in markers of pancreatic development, including Ngn3 and PTF1a. Pyridoxal 5′-phosphate (PLP), the active form of vitamin B6, also binds to Sox9 and results in a similar increase in pancreatic development markers. Sox9 is known to be specifically important for pancreatic progenitors. Previously, there was no known link between FAD, PLP, or other co-factors and Sox9 for function. Thus, our findings show the mechanism by which FAD and PLP interact with Sox9 and result in the altered expression of pancreatic progenitor transcription factors involved in the pancreas development.
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- 2022
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19. 6.7–15.3 GHz, High-Performance Broadband Low-Noise Amplifier With Large Transistor and Two-Stage Broadband Noise Matching
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Sunkyu Choi, Choul-Young Kim, and Han-Woong Choi
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Physics ,Electrostatic discharge ,business.industry ,Amplifier ,Transistor ,Condensed Matter Physics ,Inductor ,Noise figure ,Low-noise amplifier ,law.invention ,law ,Broadband ,Optoelectronics ,Electrical and Electronic Engineering ,Wideband ,business - Abstract
This letter presents a fully integrated wideband, ultralow average noise figure (NF), low power consumption, compact, and electrostatic discharge protected 6.7–15.3-GHz low-noise amplifier (LNA). A peak-gain distribution technique with a large transistor and two-stage broadband noise matching technique are proposed. For verification, a two-stage common source LNA is implemented in a 65-nm bulk complementary metal–oxide–semiconductor technology. The fabricated LNA achieved an average NF of 2.08 dB and an average gain of 19.1 dB with in-band gain ripple of ±0.75 dB in the frequency range of 7.6–14.7 GHz. It has a 3-dB fractional bandwidth of 78% and the third-order input intercept point is −9.0 dBm at 10 GHz. It consumes a 16 mA at a 0.8-V supply and has an area of 0.144 mm2.
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- 2021
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20. Area-Efficient Series-Connected Resonant Tunneling Diode Pair as Binary Neuron in Cellular Neural Network
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Sunkyu Choi, Seong-Yeon Kim, Kyounghoon Yang, Jooseok Lee, and Jongwon Lee
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010302 applied physics ,Physics ,Series (mathematics) ,business.industry ,Resonant-tunneling diode ,Binary number ,01 natural sciences ,Electronic, Optical and Magnetic Materials ,Reduction (complexity) ,Cellular neural network ,0103 physical sciences ,Optoelectronics ,Node (circuits) ,Edge extraction ,Electrical and Electronic Engineering ,Layer (object-oriented design) ,business - Abstract
In this letter, we propose an area-efficient series-connected resonant tunneling diode pair device (SCRTD) to utilize as a binary neuron device in cellular neural networks (CNNs). The proposed SCRTD (P-SCRTD) consists of two RTDs interconnected by a floating metal layer with a high-doped epitaxial layer. The P-SCRTD shows a 48 % reduction in area by eliminating the isolation area in the conventional SCRTD (C-SCRTD) owing to the symmetrical I-V characteristic of the RTD, without any performance penalty on the DC and RF characteristics by means of adopting the floating metal layer, compared to the C-SCRTD. CNN application of the P-SCRTD is investigated, showing inherent threshold operation and high-speed (12.5 Gbps) low-power (21 mW) performance, despite using the $2~\mu \text{m}$ technology node, for a unit cell for edge extraction.
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- 2020
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21. Helicobacter pylori Eradication Induced Constant Decrease in Interleukin-1B Expression over More Than 5 Years in Patients with Gastric Cancer and Dysplasia
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Cheol Min Shin, Sunkyu Choi, Hee Jin Kim, Nayoung Kim, Ji Hyun Park, and Ok Jae Lee
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medicine.medical_specialty ,H(+)-K(+)-Exchanging ATPase ,Gastroenterology ,Serology ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Biopsy ,medicine ,Hepatology ,medicine.diagnostic_test ,biology ,Alimentary Tract ,Helicobacter pylori ,business.industry ,Gastric acid ,Intestinal metaplasia ,Cancer ,Interleukin-1 beta ,medicine.disease ,biology.organism_classification ,Dysplasia ,030220 oncology & carcinogenesis ,030211 gastroenterology & hepatology ,Original Article ,business ,H(+)-K(+)-exchanging ATPase - Abstract
Background/Aims: Helicobacter pylori (Hp) suppresses gastric acid secretion by repressing the expression of the H+, K+-adenosine triphosphatase (H+, K+-ATPase) and stimulating interleukin-1 (IL-1β; encoded by IL-1B). This study was aimed at evaluating the expression of the H+, K+-ATPase and IL-1β after Hp eradication. Methods: Two hundred twentyone subjects were categorized as Hp-negative (n=84) or Hppositive (n=137) according to the results of Hp tests (histology, CLO test, culturing, and serology). The mRNA expression levels of IL-1B and ATP4A (the gene encoding the α-subunit of H+, K+-ATPase) were measured in biopsy specimens from the gastric corpus using real-time polymerase chain reaction. Results: The Hp-positive group had significantly higher IL-1B mRNA levels than the whole Hp-negative group and the intestinal metaplasia (IM)-negative subgroup. After Hp eradication, the difference between the Hp-negative and Hperadicated groups disappeared, including in the IM-negative subgroup. The IL-1B mRNA level did not significantly change from the baseline level. Within the gastric cancer (GC)/dysplasia subgroup, the IL-1B mRNA levels at 1, 2, 3-4, and ≥5 years after Hp eradication were significantly lower than the baseline level. The difference in ATP4A mRNA levels between the Hp-negative and Hp-positive groups was not significant at baseline, and the changes in the ATP4A mRNA levels after Hp eradication compared to the baseline levels in the whole group and subgroups stratified by the presence of IM and GC/dysplasia were not significant. Conclusions: Infection with Hp has an effect on the level of IL-1B mRNA in IM-negative subjects. The continuous reduction in the IL-1B mRNA level in patients with GC/dysplasia after Hp eradication contributes to the prevention of metachronous GC after Hp eradication. (Gut Liver 2020;14:735-745)
- Published
- 2020
22. A <scp>1 V</scp> 25 to 30 <scp>GHz</scp> three‐stage linear <scp>CMOS</scp> power amplifier using driver stage <scp>RF</scp> predistortion technique
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Jeong-Taek Lim, Han-Woong Choi, Sunkyu Choi, Eun-Gyu Lee, Hyeon-June Kim, and Choul-Young Kim
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Three stage ,Cmos power amplifier ,CMOS ,Computer science ,Amplifier ,Electronic engineering ,Stage (hydrology) ,Electrical and Electronic Engineering ,Condensed Matter Physics ,Atomic and Molecular Physics, and Optics ,Predistortion ,Electronic, Optical and Magnetic Materials - Published
- 2020
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23. Prediction of Apnea‐Hypopnea Index Using Sound Data Collected by a Noncontact Device
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Jeong-Whun Kim, Sunkyu Choi, Kyogu Lee, Sung-Woo Cho, Tae-Hoon Kim, and Jaeyoung Shin
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Male ,medicine.medical_specialty ,Polysomnography ,0206 medical engineering ,Breathing sounds ,02 engineering and technology ,Severity of Illness Index ,03 medical and health sciences ,0302 clinical medicine ,Predictive Value of Tests ,Internal medicine ,medicine ,Humans ,In patient ,Prospective Studies ,Monitoring, Physiologic ,Respiratory Sounds ,Sound (medical instrument) ,Sleep Apnea, Obstructive ,business.industry ,Middle Aged ,medicine.disease ,020601 biomedical engineering ,Obstructive sleep apnea ,Otorhinolaryngology ,Apnea–hypopnea index ,Cardiology ,Female ,Surgery ,business ,030217 neurology & neurosurgery - Abstract
To predict the apnea-hypopnea index (AHI) in patients with obstructive sleep apnea (OSA) using data from breathing sounds recorded using a noncontact device during sleep.Prospective cohort study.Tertiary referral hospital.Audio recordings during sleep were performed using an air-conduction microphone during polysomnography. Breathing sounds recorded from all sleep stages were analyzed. After noise reduction preprocessing, the audio data were segmented into 5-second windows and sound features were extracted. Estimation of AHI by regression analysis was performed using a Gaussian process, support vector machine, random forest, and simple linear regression, along with 10-fold cross-validation.In total, 116 patients who underwent attended, in-laboratory, full-night polysomnography were included. Overall, random forest resulted in the highest performance with the highest correlation coefficient (0.83) and least mean absolute error (9.64 events/h) and root mean squared error (13.72 events/h). Other models resulted in somewhat lower but similar performances, with correlation coefficients ranging from 0.74 to 0.79. The estimated AHI tended to be underestimated as the severity of OSA increased. Regarding bias and precision, estimation performances in the severe OSA subgroup were the lowest, regardless of the model used. Among sound features, derivative of the area methods of moments of overall standard deviation demonstrated the highest correlation with AHI.AHI was fairly predictable by using data from breathing sounds generated during sleep. The prediction model may be useful not only for prescreening but also for follow-up after treatment in patients with OSA.
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- 2020
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24. Epidemiology and Long-Term Adverse Outcomes in Korean Patients with Congenital Adrenal Hyperplasia: A Nationwide Study
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Jung Hee Kim, Sunkyu Choi, Young Ah Lee, Juneyoung Lee, and Sin Gon Kim
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Adult ,Endocrinology ,endocrine system diseases ,Adrenal Hyperplasia, Congenital ,Cardiovascular Diseases ,Endocrinology, Diabetes and Metabolism ,Case-Control Studies ,Republic of Korea ,Diabetes Mellitus ,nutritional and metabolic diseases ,Humans - Abstract
Background: Previous studies on the epidemiology and complications of congenital adrenal hyperplasia (CAH) were conducted in Western countries and in children/adolescents. We aimed to explore the epidemiology of CAH, as well as the risk of comorbidities and mortality, in a Korean nationwide case-control study.Methods: CAH patients (n=2,840) were included between 2002 and 2017 from the National Health Insurance Service database and the Rare Intractable Disease program. CAH patients were compared, at a 1:10 ratio, with age-, sex-, and index year-matched controls (n=28,400).Results: The point prevalence of CAH patients in Korea was 1 in 18,745 persons in 2017. The annual incidence rate declined between 2003 and 2017 from 3.25 to 0.41 per 100,000 persons. CAH patients were at elevated risk for cardiovascular disease (odds ratio [OR], 1.6; 95% confidence interval [CI], 1.4 to 1.9), stroke (OR, 1.7; 95% CI, 1.3 to 2.0), diabetes mellitus (OR, 2.8; 95% CI, 2.6 to 3.1), dyslipidemia (OR, 2.4; 95% CI, 2.2 to 2.6), and psychiatric disorders (OR, 1.5; 95% CI, 1.3 to 1.6). Fracture risk increased in CAH patients aged over 40 years (OR, 1.4; 95% CI, 1.1 to 1.7). CAH patients were at higher risk of mortality than controls (hazard ratio, 1.6; 95% CI, 1.3 to 2.0).Conclusion: Our nationwide study showed a recent decline in the incidence of CAH and an elevated risk for cardiovascular, metabolic, skeletal, and psychiatric disorders in CAH patients. Lifelong management for comorbidity risk is a crucial component of treating CAH patients.
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- 2021
25. 1-W, High-Gain, High-Efficiency, and Compact Sub-GHz Linear Power Amplifier Employing a 1:1 Transformer Balun in 180-nm CMOS
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Sunkyu Choi, Choul-Young Kim, Jeong-Taek Lim, and Han-Woong Choi
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Materials science ,business.industry ,Amplifier ,020206 networking & telecommunications ,Biasing ,02 engineering and technology ,Condensed Matter Physics ,law.invention ,IMD3 ,CMOS ,law ,Balun ,0202 electrical engineering, electronic engineering, information engineering ,Optoelectronics ,Cascode ,Electrical and Electronic Engineering ,business ,Transformer ,Monolithic microwave integrated circuit - Abstract
This letter presents a fully integrated two-stage monolithic microwave integrated circuit (MMIC) power amplifier (PA) with a 1:1 transformer balun in Taiwan Semiconductor Manufacturing Company (TSMC) 180-nm CMOS process. To optimize the performance of PA, an on-chip 1:1 turn spiral transformer balun (STB) was used with a high supply power through the cascode topology. The proposed PA achieved a 40–43-dB gain and a saturation power ( $P_{\mathrm {sat}}$ ) of 29.9–30.3 dBm with a 40%–45% of power-added efficiency (PAE) in the frequency range of 820–1000 MHz. Using the antiphase biasing technique, the PA achieves a linear output power of 25 dBm with 29.5% PAE in 20-MHz spacing two-tone measurement, which satisfies IMD3 $3.3\times 0.86\,\,{\mathrm {mm}}^{2}$ .
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- 2020
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26. A 25-GHz Power Amplifier Using Three-Stage Antiphase Linearization in Bulk 65-nm CMOS Technology
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Sunkyu Choi, Han-Woong Choi, and Choul-Young Kim
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Materials science ,business.industry ,Subthreshold conduction ,Amplifier ,Electrical engineering ,020206 networking & telecommunications ,02 engineering and technology ,Condensed Matter Physics ,Predistortion ,CMOS ,IMD3 ,Linearization ,Logic gate ,0202 electrical engineering, electronic engineering, information engineering ,Electrical and Electronic Engineering ,business ,Intermodulation - Abstract
This letter presents a 25-GHz power amplifier (PA) in bulk 65-nm CMOS technology. To ensure improved efficiency, the proposed PA was implemented using a three-stage antiphase linearization technique. The circuit of the three-stage antiphase linearization technique consisted of the predistortion drive stage, interstage, and the power stage. The positive-signed third-order intermodulation distortion (IMD3) is produced in the predistortion drive stage with subthreshold bias condition and is compensated with the negative-signed IMD3 divided by the interstage and power stage. Consequently, as the class burden of the power stage is reduced, the overall efficiency can be increased. The proposed CMOS PA was operated within a frequency range of 24–27 GHz. For a supply voltage of 1 V, the proposed PA achieved an average output power of 10.3 dBm, power-added efficiency (PAE) of 6.8%, and error vector magnitude (EVM) of 5.17% at 25 GHz for a 20-MHz bandwidth, 64 QAM, and 10.55-dB peak to average power ratio (PAPR) Long Term Evolution (LTE) signal. The proposed PA achieved a 32-dB peak gain, 33% peak PAE, 17.7-dBm saturated output power ( $P_{\text {sat}}$ ), and 16.3-dBm output 1-dB compression point.
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- 2020
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27. Golgin45-Syntaxin5 Interaction Contributes to Structural Integrity of the Golgi Stack
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Xinran Liu, Xihua Yue, Morven Graham, Lianhui Zhu, Yi Qian, Intaek Lee, Dipak Meshram, James E. Rothman, Sunkyu Choi, and Neeraj Tiwari
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0301 basic medicine ,Protein domain ,Mutant ,Mutation, Missense ,Golgi Apparatus ,lcsh:Medicine ,Article ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Microscopy, Electron, Transmission ,Protein Domains ,Golgi ,Humans ,lcsh:Science ,Multidisciplinary ,Viral matrix protein ,Qa-SNARE Proteins ,Chemistry ,Point mutation ,lcsh:R ,Golgi Matrix Proteins ,Golgi apparatus ,Phenotype ,Cell biology ,030104 developmental biology ,Amino Acid Substitution ,symbols ,Golgi cisterna ,lcsh:Q ,030217 neurology & neurosurgery ,HeLa Cells ,Binding domain - Abstract
The unique stacked morphology of the Golgi apparatus had been a topic of intense investigation among the cell biologists over the years. We had previously shown that the two Golgin tethers (GM130 and Golgin45) could, to a large degree, functionally substitute for GRASP-type Golgi stacking proteins to sustain normal Golgi morphology and function in GRASP65/55-double depleted HeLa cells. However, compared to well-studied GM130, the exact role of Golgin45 in Golgi structure remains poorly understood. In this study, we aimed to further characterize the functional role of Golgin45 in Golgi structure and identified Golgin45 as a novel Syntaxin5-binding protein. Based primarily on a sequence homology between Golgin45 and GM130, we found that a leucine zipper-like motif in the central coiled-coil region of Golgin45 appears to serve as a Syntaxin5 binding domain. Mutagenesis study of this conserved domain in Golgin45 showed that a point mutation (D171A) can abrogate the interaction between Golgin45 and Syntaxin5 in pull-down assays using recombinant proteins, whereas this mutant Golgin45 binding to Rab2-GTP was unaffected in vitro. Strikingly, exogenous expression of this Syntaxin5 binding deficient mutant (D171A) of Golgin45 in HeLa cells resulted in frequent intercisternal fusion among neighboring Golgi cisterna, as readily observed by EM and EM tomography. Further, double depletion of the two Syntaxin5-binding Golgin tethers also led to significant intercisternal fusion, while double depletion of GRASP65/55 didn’t lead to this phenotype. These results suggest that certain tether-SNARE interaction within Golgi stack may play a role in inhibiting intercisternal fusion among neighboring cisternae, thereby contributing to structural integrity of the Golgi stack.
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- 2019
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28. Optimal control strategies of eight parallel heat pumps using Gaussian process emulator
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SungHo Park, Ki Uhn Ahn, Seungho Hwang, Sunkyu Choi, and Cheol-Soo Park
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Computer science ,020209 energy ,0211 other engineering and technologies ,Control engineering ,02 engineering and technology ,Building and Construction ,Optimal control ,Computer Science Applications ,law.invention ,Above ground ,symbols.namesake ,law ,Modeling and Simulation ,021105 building & construction ,Architecture ,0202 electrical engineering, electronic engineering, information engineering ,symbols ,Gaussian process emulator ,Gaussian process ,Heat pump - Abstract
This study describes the development of the optimal control strategies of eight parallel heat pumps in an existing building. The building consists of seven floors above ground and two floors underg...
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- 2019
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29. [The Effect of COVID-19 on Pediatric Intussusception: A Retrospective Study of a Single Center in South Korea with 10-Year Experience]
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Yeo Jin Yoo, Bo-Kyung Je, Ga Young Choi, Jee Hyun Lee, Sunkyu Choi, and Ji Young Lee
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Radiology, Nuclear Medicine and imaging - Abstract
To evaluate the effect of the emergence of coronavirus disease-19 (COVID-19) on pediatric intussusception.Patients (18 years) who were diagnosed with intussusception and received enema reduction from 2011 to 2020 were included. We reviewed the demographics, yearly/monthly/seasonal incidence of intussusception, method and failure rate of enema reduction, recurrence rate of intussusception, surgical record, and pathologic report. Subsequently, we investigated the differences in mean age, failure rate of enema reduction, and recurrence rate of intussusception between the cases in 2020 and those in the period from 2011 to 2019.A total of 859 enema reductions were performed during the past decade, more in males and in the age1 year (mean age, 22.2 months). The yearly incidence was highest in 2014 and lowest in 2020, and the monthly incidence was highest on December and September. The cases in 2020 (With the emergence of COVID-19, the number of enema reductions was remarkably decreased with a lower mean age, higher failure rate, and higher recurrence rate.
- Published
- 2021
30. ACBD3 modulates KDEL receptor interaction with PKA for its trafficking via tubulovesicular carrier
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Sunkyu Choi, Jie Jia, Intaek Lee, Piliang Hao, Yijing Wang, Bopil Gim, Shuaiyang Jing, Chuanting Tan, Mengjing Bao, Pascal Ziltener, Lianhui Zhu, Francesca Bottanelli, Yi Qian, and Xihua Yue
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Receptors, Peptide ,Physiology ,QH301-705.5 ,KDEL ,ACBD3 ,ArfGAPs ,Golgi Apparatus ,Cellular homeostasis ,Plant Science ,Biology ,General Biochemistry, Genetics and Molecular Biology ,symbols.namesake ,KDEL receptor ,Structural Biology ,Cell surface receptor ,Golgi ,Protein Kinase A ,Secretion ,Biology (General) ,Receptor ,Protein kinase A ,Ecology, Evolution, Behavior and Systematics ,Secretory pathway ,Adaptor Proteins, Signal Transducing ,Arf1-GTP ,Cell Membrane ,500 Naturwissenschaften und Mathematik::570 Biowissenschaften ,Biologie::570 Biowissenschaften ,Biologie ,Cell Biology ,Golgi apparatus ,Cyclic AMP-Dependent Protein Kinases ,Cell biology ,symbols ,General Agricultural and Biological Sciences ,Research Article ,Developmental Biology ,Biotechnology - Abstract
Background KDEL receptor helps establish cellular equilibrium in the early secretory pathway by recycling leaked ER-chaperones to the ER during secretion of newly synthesized proteins. Studies have also shown that KDEL receptor may function as a signaling protein that orchestrates membrane flux through the secretory pathway. We have recently shown that KDEL receptor is also a cell surface receptor, which undergoes highly complex itinerary between trans-Golgi network and the plasma membranes via clathrin-mediated transport carriers. Ironically, however, it is still largely unknown how KDEL receptor is distributed to the Golgi at steady state, since its initial discovery in late 1980s. Results We used a proximity-based in vivo tagging strategy to further dissect mechanisms of KDEL receptor trafficking. Our new results reveal that ACBD3 may be a key protein that regulates KDEL receptor trafficking via modulation of Arf1-dependent tubule formation. We demonstrate that ACBD3 directly interact with KDEL receptor and form a functionally distinct protein complex in ArfGAPs-independent manner. Depletion of ACBD3 results in re-localization of KDEL receptor to the ER by inducing accelerated retrograde trafficking of KDEL receptor. Importantly, this is caused by specifically altering KDEL receptor interaction with Protein Kinase A and Arf1/ArfGAP1, eventually leading to increased Arf1-GTP-dependent tubular carrier formation at the Golgi. Conclusions These results suggest that ACBD3 may function as a negative regulator of PKA activity on KDEL receptor, thereby restricting its retrograde trafficking in the absence of KDEL ligand binding. Since ACBD3 was originally identified as PAP7, a PBR/PKA-interacting protein at the Golgi/mitochondria, we propose that Golgi-localization of KDEL receptor is likely to be controlled by its interaction with ACBD3/PKA complex at steady state, providing a novel insight for establishment of cellular homeostasis in the early secretory pathway.
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- 2021
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31. Quality of life after sphincter preservation surgery or abdominoperineal resection for low rectal cancer (ASPIRE): A long-term prospective, multicentre, cohort study
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Sung-Min Lee, Doo Seok Lee, Jae Sung Kim, Heung Kwon Oh, Sunkyu Choi, Sung Il Kang, Soyeon Ahn, Keun-Wook Lee, Sung Chan Park, H.S. Lee, Kyu Joo Park, Hyun Jung Kim, Ji Won Park, Dae Kyung Sohn, Seung-Bum Ryoo, Min Hyun Kim, Bong Hwa Lee, Young Soo Park, Jae Hwan Oh, Hyoung-Chul Park, Eui Gon Youk, Duck-Woo Kim, Jung Rae Cho, Kyoung Ho Lee, Seung-Yong Jeong, Min Jung Kim, Seung Chul Heo, Rumi Shin, Young Hoon Kim, and Sung-Bum Kang
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Quality of life ,medicine.medical_specialty ,Urinary function ,Colorectal cancer ,media_common.quotation_subject ,Sexual function ,Urination ,Internal Medicine ,medicine ,Abdominoperineal resection ,Rectal cancer ,Prospective cohort study ,media_common ,business.industry ,Health Policy ,lcsh:Public aspects of medicine ,Hazard ratio ,Public Health, Environmental and Occupational Health ,Obstetrics and Gynecology ,lcsh:RA1-1270 ,Sphincter preservation surgery ,medicine.disease ,Surgery ,Psychiatry and Mental health ,Infectious Diseases ,Pediatrics, Perinatology and Child Health ,Geriatrics and Gerontology ,business ,Cohort study ,Research Paper ,Oncological outcome - Abstract
Summary: Background: The long-term effects of radical resection on quality of life may influence the treatment selection. The objective of this study was to determine whether abdominoperineal resection has a better effect on the quality of life than sphincter preservation surgery at 3 years after surgery Methods: This prospective, cohort study included patients who underwent radical resection for low rectal cancer. The primary outcomes were European Organisation for Research and Treatment of Cancer QLQ-C30 and CR38 quality of life scores 3 years after surgery, which were compared with linear generalised estimating equations, after adjustment for baseline values, a time effect, and an interaction effect between time and treatment. The secondary outcomes included sexual-urinary functions and oncological outcomes. The study was registered with ClinicalTrials.gov (NCT01461525). Findings: Between December 2011 and August 2016, 342 patients were enrolled: 268 (78•4%) underwent sphincter preservation surgery and 74 (21•6%) underwent abdominoperineal resection. The global quality of life scores did not differ between sphincter preservation surgery and abdominoperineal resection groups (adjusted mean difference, 4•2 points on a 100-point scale; 95% confidence interval [CI], −1•3 to 9•7, p = 0•1316). Abdominoperineal resection was associated with a worse body image (9•8 points; 95% CI, 2•9 to 16•6, p = 0•0052), micturition symptoms (−8•0 points; 95% CI, -14•1 to −1•8, p = 0•0108), male sexual problems (−19•9 points; 95% CI, -33•1 to -6•7, p = 0•0032), less confidence in getting and maintaining an erection in males (0•5 points on a 5-point scale; 95% CI, 0•1 to 0•8, p = 0•0155), and worse urinary symptoms (−5•4 points on a 35-point scale; 95% CI, −8•0 to −2•7, p
- Published
- 2020
32. Proteomic profiling of metformin effects in 3T3‐L1 adipocytes by SILAC‐based quantification
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Sunkyu, Choi, Rudolf, Engelke, Neha, Goswami, and Frank, Schmidt
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Proteomics ,Mice ,Glucose ,Diabetes Mellitus, Type 2 ,3T3-L1 Cells ,Isotope Labeling ,Adipocytes ,Cell Culture Techniques ,Animals ,Amino Acids ,Molecular Biology ,Biochemistry ,Metformin - Abstract
Metformin is a common and generally the first medication prescribed for treatment of type 2 diabetes. Its mechanism involves affecting pathways that regulate glucose and lipid metabolism in metabolic cells such as that of muscle and liver cells. In spite of various studies exploring its effects, the proteome changes in adipocytes in response to metformin remains poorly understood. In this study, we performed stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative proteomic profiling to study the effects of metformin specifically on 3T3-L1 adipocytes. We define proteins that exhibited altered levels with metformin treatment, 400 of them showing statistically significant changes in our study. Our results suggest that metformin affects not only the PPAR signaling pathway, as well as glucose and lipid metabolism, but also protein folding, endoplasmic reticulum stress, negative regulation of appetite, and one-carbon folate metabolism in adipocytes. This proteomic investigation provides important insight into effects of metformin in adipocytes.
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- 2022
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33. Comparative Proteomic Profiling of 3T3-L1 Adipocyte Differentiation Using SILAC Quantification
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Neha Goswami, Frank Schmidt, and Sunkyu Choi
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0301 basic medicine ,Proteomics ,Adipogenesis ,030102 biochemistry & molecular biology ,NeXtProt ,Proteomic Profiling ,Chemistry ,Cell Differentiation ,General Chemistry ,Biochemistry ,Cell biology ,03 medical and health sciences ,Mice ,030104 developmental biology ,Stable isotope labeling by amino acids in cell culture ,3T3-L1 Cells ,Proteome ,Human proteome project ,Adipocytes ,Animals ,Humans ,Cristae formation - Abstract
Adipocyte differentiation is a general physiological process that is also critical for metabolic syndrome. In spite of extensive study in the past two decades, adipogenesis is a still complex cellular process that is accompanied by complicated molecular mechanisms. Here, we performed SILAC-based quantitative global proteomic profiling of 3T3-L1 adipocyte differentiation. We report protein changes to the proteome profiles, with 354 proteins exhibiting significant increase and 56 proteins showing decrease in our statistical analysis. Our results show that adipocyte differentiation is involved not only in metabolic processes by increasing TCA cycle, fatty acid synthesis, lipolysis, acetyl-CoA production, antioxidants, and electron transport, but also in nicotinamide metabolism, cristae formation, mitochondrial protein import, and Ca2+ transport into mitochondria and ER. A search for Chromosome-Centric Human Proteome Project (C-HPP) using neXtprot highlighted one protein with a protein existence uncertain (PE5) and 17 proteins as functionally uncharacterized protein existence 1 (uPE1). This study provides quantitative information on proteome changes in adipogenic differentiation, which is helpful in improving our understanding of the processes of adipogenesis.
- Published
- 2020
34. A CMOS Band-Pass Low Noise Amplifier with Excellent Gain Flatness for mm-Wave 5G Communications
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Choul-Young Kim, Sunkyu Choi, and Han-Woong Choi
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Physics ,business.industry ,Frequency band ,Amplifier ,Bandwidth extension ,020206 networking & telecommunications ,02 engineering and technology ,Noise figure ,Low-noise amplifier ,Parasitic capacitance ,CMOS ,0202 electrical engineering, electronic engineering, information engineering ,Optoelectronics ,Wideband ,business - Abstract
This paper presents a two-stage 24–32 GHz low-noise amplifier (LNA) with excellent gain flatness for wide bandwidth communication applications. A new band-pass type 2-stage common-source (CS) LNA configuration using the pole-tuning technique that actively exploits the parasitic capacitance of a CMOS device is proposed for bandwidth extension with low in-band gain variation. To demonstrate the feasibility of the proposed circuit configuration, a wideband LNA is implemented using a 65-nm CMOS process. The LNA shows a gain variation of ±0.19 dB in frequency band of 24 to 32 GHz with a peak gain of 18.64 dB and a noise figure of 2.27 dB while consuming 10.0 rnA from a 1V supply. The core circuit occupies an area of 0.23 × 0.43 mm2.
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- 2020
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35. Scenario-based HVAC Energy Cost Optimizer for Heterogeneous Heat-source Systems of Real-life Hospital Building
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SungHo Park, Ki Uhn Ahn, Seungho Hwang, Sunkyu Choi, and Cheol Soo Park
- Published
- 2020
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36. Quality of Life after Sphincter Preservation Surgery or Abdominoperineal Resection for Low Rectal Cancer (ASPIRE): A Long-Term Prospective, Multicentre, Cohort Study
- Author
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Sung-Bum Kang, Jung Rae Cho, Seung-Yong Jeong, Jae Hwan Oh, Soyeon Ahn, Sunkyu Choi, Duck-Woo Kim, Bong Hwa Lee, Eui Gon Youk, Sung Chan Park, Seung Chul Heo, Doo-Seok Lee, Seung-Bum Ryoo, Ji Won Park, Hyoung-Chul Park, Sung-Min Lee, Sung Il Kang, Min Hyun Kim, Heung-Kwon Oh, Rumi Shin, Min Jung Kim, Kyoung Ho Lee, Young-Hoon Kim, Jae-Sung Kim, Keun-Wook Lee, Hye Seung Lee, Hyun Jung Kim, Young Soo Park, Dae Kyung Sohn, Kyu Joo Park, and Seoul Colorectal Research Group (SECOG)
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medicine.medical_specialty ,business.industry ,Abdominoperineal resection ,Colorectal cancer ,media_common.quotation_subject ,Hazard ratio ,medicine.disease ,Urination ,Surgery ,Sphincter preservation ,Quality of life ,Medicine ,business ,Sexual function ,Cohort study ,media_common - Abstract
Background: The long-term effects of radical resection on quality of life may influence the treatment selection. The objective of this study was to compare the quality of life after sphincter preservation surgery or abdominoperineal resection for low rectal cancer. Methods: This prospective, cohort study included patients who underwent radical resection for low rectal cancer. The primary outcomes were EORTC QLQ-C30 and CR38 quality-of-life scores 3 years after surgery, which were compared with linear generalised estimating equations, after adjustment for baseline values, a time effect, and an interaction effect between time and treatment. The secondary outcomes included sexual-urinary functions and oncological outcomes. Findings: Between December 2011 and August 2016, 342 patients were enrolled: 268 (78·4%) underwent sphincter preservation surgery and 74 (21·6%) underwent abdominoperineal resection. After 3 years, abdominoperineal resection was associated with a worse body image (adjusted mean difference, 9·8 points on a 100-point scale; 95% CI, 2·9 to 16·6, p=0·0052), micturition symptoms (-8·0 points; 95% CI, -14·1 to -1·8, p=0·0108), male sexual problems (-19·9 points; 95% CI, -33·1 to -6·7, p=0·0032), less confidence in getting and maintaining an erection in males (0·5 points on a 5-point scale; 95% CI, 0·1 to 0·8, p=0·0155), and worse urinary symptoms (-5·4 points on a 35-point scale; 95% CI, -8·0 to -2·7, p
- Published
- 2020
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37. 0.18 μm CMOS Power Amplifier for Subgigahertz Short-Range Wireless Communications
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Sunkyu Choi, Jae-Hyeok Song, Bang Chul Jung, Wansik Kim, Sosu Kim, Jeong-Taek Lim, Sang-Hyo Kim, Dongju Lee, Eun-Gyu Lee, Han-Woong Choi, Choul-Young Kim, and Mihui Seo
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Cmos power amplifier ,CMOS ,Computer science ,business.industry ,Amplifier ,Electrical engineering ,Cascode ,business ,Short range wireless - Published
- 2018
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38. Machine learning vs. hybrid machine learning model for optimal operation of a chiller
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Sunkyu Choi, SungHo Park, Seungho Hwang, Cheol-Soo Park, and Ki Uhn Ahn
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Fluid Flow and Transfer Processes ,Chiller ,Environmental Engineering ,Hybrid machine ,biology ,Artificial neural network ,business.industry ,Computer science ,020209 energy ,Turbo ,0211 other engineering and technologies ,02 engineering and technology ,Building and Construction ,biology.organism_classification ,Machine learning ,computer.software_genre ,021105 building & construction ,0202 electrical engineering, electronic engineering, information engineering ,Artificial intelligence ,business ,computer - Abstract
This article compares two modeling approaches for optimal operation of a turbo chiller installed in an office building: (1) a machine learning model developed with artificial neural network (ANN) a...
- Published
- 2018
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39. Prevalence, Incidence, Comorbidity, and Mortality Rates of Ossification of Posterior Longitudinal Ligament in the Cervical Spine: A Nested Case-Control Cohort Study
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Yoon Ha, Seong Yi, Sunkyu Choi, Do Heum Yoon, Dong Ah Shin, Keung Nyun Kim, and Bong Ju Moon
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Male ,0301 basic medicine ,medicine.medical_specialty ,Prevalence ,Ossification of Posterior Longitudinal Ligament ,03 medical and health sciences ,Age Distribution ,0302 clinical medicine ,Internal medicine ,Republic of Korea ,Epidemiology ,Humans ,Medicine ,Sex Distribution ,Aged ,business.industry ,Incidence ,Mortality rate ,Incidence (epidemiology) ,Case-control study ,medicine.disease ,Comorbidity ,030104 developmental biology ,Case-Control Studies ,Nested case-control study ,Cervical Vertebrae ,Female ,Surgery ,Neurology (clinical) ,business ,030217 neurology & neurosurgery ,Cohort study - Abstract
To evaluate prevalence, incidence, morbidity, and mortality rates of cervical ossification of posterior longitudinal ligament (OPLL) using data from a 12-year national cohort of 1,025,340 Korean people.A nested case-control cohort study was performed from 2002 to 2013 using the insurance claims database provided by the National Health Insurance Service. We examined prevalence and incidence of cervical OPLL. Age- and sex-matched control subjects were randomly extracted, with 10 times the number of OPLL cases. Differences in sex, comorbidity, and relative survival rate compared with control subjects were assessed.Cumulative prevalence was 20,960 per 1,025,340 people for 12 years. Annual incidence was approximately 199-371 per 1 million people. Overall crude mortality rate was 7.64%. Relative survival rate of OPLL cases was not significantly different from control cases. Diabetes, hypertension, cardiovascular disease, and cerebrovascular disease, except renal disease, correlated significantly with OPLL compared with control cases (P0.001). Additionally, between dead and surviving patients among OPLL cases, all comorbidities correlated more significantly with death (P 0.001). Furthermore, between surgery and nonsurgery cases of OPLL, diabetes, hypertension, and renal disease (P 0.05) were significantly associated with surgery.Annual incidence of OPLL was 199-371 per 1,025,340 people for 10 years. Diabetes, hypertension, cardiovascular disease, and cerebrovascular disease, except renal disease, correlated significantly with OPLL compared with control cases. Especially, diabetes, hypertension, and renal disease were associated with patients with OPLL who underwent surgery.
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- 2018
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40. Impact of H3.3 K27M Mutation on Prognosis and Survival of Grade IV Spinal Cord Glioma on the Basis of New 2016 World Health Organization Classification of the Central Nervous System
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Sunkyu Choi, Chang Ok Suh, Junjeong Choi, Yoon Ha, Seong Yi, Du Su Kim, Keung Nyun Kim, Se Hoon Kim, Do Heum Yoon, Jong Hee Chang, and Dong Ah Shin
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Oncology ,medicine.medical_specialty ,business.industry ,Central nervous system ,medicine.disease ,Spinal cord ,Spinal Cord Glioma ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Text mining ,Lumbar ,030220 oncology & carcinogenesis ,Internal medicine ,Glioma ,medicine ,Surgery ,Neurology (clinical) ,business ,Pathological ,030217 neurology & neurosurgery ,Survival analysis - Abstract
BACKGROUND Spinal cord glioma grade IV is a rare, diffuse midline glioma. H3 K27M-mutant was classified in a different entity in the 2016 World Health Organization (WHO) classification recently. No reports about prognosis of spinal cord glioma grade IV are available yet. OBJECTIVE To analyze the prognostic factors for spinal cord glioma grade IV. METHODS Twenty-five patients with spinal cord glioma of grade IV who underwent surgery in a single institute were selected. All grade IV spinal cord glioma histologically confirmed as glioblastoma or "diffuse midline glioma with H3 K27M-mutant" by the 2016 WHO classification of the central nervous system were included. Basic demographics, treatment modalities, and pathological tumor molecular profiles were investigated for prognosis. RESULTS Mean age was 39.1 yr; male to female ratio was 18 : 7. Tumor was located in thoracic cord (53.3%), cervical cord (40%), and lumbar area (6.7%). Median overall survival was 37.1 mo; median disease-free survival was 18.5 mo. Treatment modality showed no statistical difference. Only K27M profile showed significant prognostic value, 20 patients (80%) showed K27M mutation positive, K27M mutation patients showed longer overall survival (40.07 mo) than K27M negative patients (11.63 mo, P
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- 2018
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41. Feasibility of a Modified E-PASS and POSSUM System for Postoperative Risk Assessment in Patients with Spinal Disease
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Keung Nyun Kim, Do Young Kim, Dong Ah Shin, Yoon Ha, Seong Yi, Sunkyu Choi, Do Heum Yoon, and Dong Hyun Chun
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Adult ,Male ,medicine.medical_specialty ,Surgical stress ,Adolescent ,Pleural effusion ,Spinal disease ,Risk Assessment ,Severity of Illness Index ,Young Adult ,03 medical and health sciences ,Postoperative Complications ,0302 clinical medicine ,Hematoma ,Severity of illness ,Humans ,Medicine ,Aged ,Retrospective Studies ,Aged, 80 and over ,030222 orthopedics ,business.industry ,Retrospective cohort study ,Middle Aged ,medicine.disease ,Comorbidity ,Surgery ,ROC Curve ,Area Under Curve ,Case-Control Studies ,Female ,Spinal Diseases ,Neurology (clinical) ,business ,Complication ,030217 neurology & neurosurgery - Abstract
Objective This retrospective case control study aimed to evaluate the feasibility of using Estimation of Physiological Ability and Surgical Stress (E-PASS) and Physiological and Operative Severity Score for the enumeration of Mortality and Morbidity (POSSUM) systems in patients undergoing spinal surgical procedures. Degenerative spine disease has increased in incidence in aging societies, as has the number of older adult patients undergoing spinal surgery. Many older adults are at a high surgical risk because of comorbidity and poor general health. Methods We retrospectively reviewed 217 patients who had undergone spinal surgery at a single tertiary care. We investigated complications within 1 month after surgery. Criteria for both skin incision in E-PASS and operation magnitude in the POSSUM system were modified to fit spine surgery. We calculated the E-PASS and POSSUM scores for enrolled patients, and investigated the relationship between postoperative complications and both surgical risk scoring systems. To reinforce the predictive ability of the E-PASS system, we adjusted equations and developed modified E-PASS systems. Results The overall complication rate for spinal surgery was 22.6%. Forty-nine patients experienced 58 postoperative complications. Nineteen major complications, including hematoma, deep infection, pleural effusion, progression of weakness, pulmonary edema, esophageal injury, myocardial infarction, pneumonia, reoperation, renal failure, sepsis, and death, occurred in 17 patients. The area under the receiver operating characteristic curve (AUC) for predicted postoperative complications after spine surgery was 0.588 for E-PASS and 0.721 for POSSUM. For predicted major postoperative complications, the AUC increased to 0.619 for E-PASS and 0.842 for POSSUM. The AUC of the E-PASS system increased from 0.588 to 0.694 with the Modified E-PASS equation. Conclusions The POSSUM system may be more useful than the E-PASS system for estimating postoperative surgical risk in patients undergoing spine surgery. The preoperative risk scores of E-PASS and POSSUM can be useful for predicting postoperative major complications. To enhance the predictability of the scoring systems, using of modified equations based on spine surgery-specific factors may help ensure surgical outcomes and patient safety.
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- 2018
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42. A 25–30-GHz Asymmetric SPDT Switch for 5G Applications in 65-nm Triple-Well CMOS
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Sunkyu Choi, Choul-Young Kim, and Kyeong-Hyeok Lee
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Physics ,business.industry ,dBm ,Transmitter ,Transistor ,020206 networking & telecommunications ,02 engineering and technology ,Condensed Matter Physics ,law.invention ,Power (physics) ,CMOS ,law ,0202 electrical engineering, electronic engineering, information engineering ,Insertion loss ,Optoelectronics ,Electrical and Electronic Engineering ,Cmos process ,business ,5G - Abstract
This letter presents a novel asymmetric single-pole double-throw (SPDT) triple-well CMOS TRx switch for 5G applications at millimeter-wave (mm-wave) frequencies of 25–30 GHz. In 5G applications, low losses in both TRx modes and high power-handling capability in the transmit mode are required. Hence, we proposed a novel structure in which the transmitter and receiver sides are designed asymmetrically to improve the power-handling capability by using all the transistors in the ON-state when in the transmit mode. The proposed TRx SPDT switch is fabricated using the 65-nm triple-well CMOS process and operates in the frequency range of 25–30 GHz with less than 1.16-dB insertion loss in both TRx modes. When in the transmit mode, the measurement result of IP1 dB is 31.8 dBm at 28 GHz. The measurement result of input third-order intercept point is 36 dBm at an input power of 5 dBm in the transmit mode, and the core area is 0.14 mm $\times0.31$ mm.
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- 2019
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43. In Reply: Impact of H3.3 K27M Mutation on Prognosis and Survival of Grade IV Spinal Cord Glioma on the Basis of New 2016 WHO Health Organization Classification of the Central Nervous System
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Seong Yi, Sunkyu Choi, and Se Hoon Kim
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Mutation ,Humans ,Surgery ,Glioma ,Spinal Cord Neoplasms ,Neurology (clinical) ,Prognosis ,030217 neurology & neurosurgery - Published
- 2018
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44. The Effect of Coffee Consumption on the Prevalence of Diabetes Mellitus: The 2012–2016 Korea National Health and Nutrition Examination Survey
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Sunkyu Choi, Jung Hun Ohn, Soyeon Ahn, Youngmi Park, and Yejee Lim
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Adult ,Male ,0301 basic medicine ,Inverse Association ,National Health and Nutrition Examination Survey ,coffee ,prevalence ,lcsh:TX341-641 ,030209 endocrinology & metabolism ,Coffee consumption ,Risk Assessment ,Article ,Continuous variable ,Habits ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Diabetes mellitus ,Republic of Korea ,Coffee intake ,medicine ,Humans ,Young adult ,030109 nutrition & dietetics ,Nutrition and Dietetics ,Korea ,business.industry ,Middle Aged ,Protective Factors ,Nutrition Surveys ,medicine.disease ,Confidence interval ,Cross-Sectional Studies ,diabetes mellitus ,Female ,business ,lcsh:Nutrition. Foods and food supply ,Food Science ,Demography - Abstract
An inverse association between coffee consumption and the risk of diabetes mellitus (DM) has been observed. However, little is known about this association in Koreans, although they are now among the top global consumers of coffee. Therefore, the aim of this study was to evaluate the association between the prevalence of DM and the amount of coffee consumption using a unit of exact measurement, regardless of the type of coffee consumed. This study was based on data acquired from the Korea National Health and Nutrition Examination Survey 2012&ndash, 2016. The participants who completed the survey were included in the statistical analysis (n = 14,578). Subjects were stratified by age (19&ndash, 39 years old: young adult, 40&ndash, 64 years old: middle-aged adult) and gender (men, women). The amount of coffee was measured using a teaspoon (tsp) unit corresponding to 5 mL of powdered coffee and was analyzed as a continuous variable. The mean powdered coffee intake per day was 1.97 tsp in women groups, 2.24 tsp in young adult men, and 2.72 tsp in middle-aged men. The frequency of coffee consumption showed an inverse relationship with the amount of coffee intake at a time. With each 1-tsp increment in daily coffee intake, the odds of DM were 0.89 (95% confidence interval (CI): 0.86&ndash, 0.92, p <, 0.001) and 0.93 (95% CI: 0.90&ndash, 0.95, p = 0.003) in middle-aged women and men, respectively. Coffee consumption was inversely correlated with the prevalence of DM even with adjustment for covariates in middle-aged adults. We delineated that the prevalence for DM decreased as coffee intake increased in Korean middle-aged adults. Therefore, our data represented an inverse association between coffee consumption and the prevalence of DM, although Koreans have a unique coffee-drinking habit.
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- 2019
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45. 25–40 GHz 180° Reflective-Type Phase Shifter using 65-nm CMOS Technology
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Choul-Young Kim, Sunkyu Choi, Jae-Hyeok Song, Eun-Gyu Lee, Sang-Hyo Kim, Han-Woong Choi, and Jeong-Taek Lim
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Materials science ,business.industry ,020208 electrical & electronic engineering ,020206 networking & telecommunications ,02 engineering and technology ,Inductor ,CMOS ,0202 electrical engineering, electronic engineering, information engineering ,Return loss ,Insertion loss ,Optoelectronics ,Hybrid coupler ,Wideband ,business ,Varicap ,Phase shift module - Abstract
This paper proposes a wideband reflection-type phase shifter (RTPS) suitable for 5G applications at mm-wave. In this phase shifter, a quadrature hybrid coupler was used as a transformer-based quadrature hybrid for broadband operation. In addition, the reflection term is composed of a varactor, an inductor, and a transmission line. The RTPS is cascaded to satisfy the phase shift range of 180°. The RTPS was fabricated in 1V 1-poly 9-metal 65-nm CMOS technology. The experimental results show that the constructed RTPS has a phase-shifting range of 184.9°, an insertion loss of 9.1 dB, a return loss of 8 dB, and an insertion loss variation of ±2.5 dB at an operating frequency of 25–43 GHz.
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- 2019
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46. Influence of diabetes mellitus on patients with lumbar spinal stenosis: A nationwide population-based study
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Keung Nyun Kim, Dong Ah Shin, Insoo Kim, Seong Yi, Chang Kyu Lee, Yoon Ha, and Sunkyu Choi
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Male ,Economics ,Social Sciences ,Comorbidity ,Cardiovascular Medicine ,Pathology and Laboratory Medicine ,Postoperative Complications ,Spinal Stenosis ,Endocrinology ,0302 clinical medicine ,Chronic Kidney Disease ,Medicine and Health Sciences ,Stenosis ,Lumbar Vertebrae ,Multidisciplinary ,Mortality rate ,Hazard ratio ,Lumbar spinal stenosis ,Middle Aged ,Prognosis ,Survival Rate ,Nephrology ,Cardiovascular Diseases ,Medicine ,Female ,Research Article ,medicine.medical_specialty ,Endocrine Disorders ,Death Rates ,Science ,Surgical and Invasive Medical Procedures ,030209 endocrinology & metabolism ,03 medical and health sciences ,Health Economics ,Signs and Symptoms ,Population Metrics ,Diagnostic Medicine ,Internal medicine ,Diabetes mellitus ,Republic of Korea ,Diabetes Mellitus ,medicine ,Humans ,Survival rate ,Aged ,Population Biology ,business.industry ,Biology and Life Sciences ,medicine.disease ,Confidence interval ,Health Care ,Metabolic Disorders ,business ,030217 neurology & neurosurgery ,Kidney disease - Abstract
PurposeTo evaluate the relationship between comorbidities, medical cost, and surgical outcome in patients with lumbar spinal stenosis (LSS) and diabetes mellitus (DM).MethodsData on patients with LSS (n = 14,298) were collected from the Korean National Health Insurance Service database from 2005 to 2007. After 8 years of follow-up, a "DM group" (n = 3,478) and a "non-DM group" (n = 10,820) were compared according to outcome measures. Cox proportional hazard regressions were performed to examine the relationship between DM, hypertension (HTN), cardiovascular disease (CVD), chronic kidney disease (CKD), cerebrovascular disease (CbVD), and surgery for LSS. The admission rate and medical cost as well asthe overall survival rate for those who underwent lumbar surgery were also assessed among patients with DM and LSS.ResultsMortality was about 1.35 times higher in the DM group than in the non-DM group. Patients with DM and comorbidities including HTN (hazard ratio [HR], 1.40; 95% confidence interval [CI], 1.25-1.56; pConclusionsIn patients with LSS, DM was associated both with poor prognosis (most significantly in those with CKD), and increased medical cost in those who underwent surgery. Nevertheless, surgical treatment for LSS in patients with DM was related to favorable prognosis compared with conservative treatment.
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- 2019
47. Prior statin therapy and mortality among critically ill patients: a systemic review and meta-analysis of cohort studies
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Sunkyu Choi, Tak Kyu Oh, and In-Ae Song
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medicine.medical_specialty ,business.industry ,Hazard ratio ,MEDLINE ,nutritional and metabolic diseases ,030208 emergency & critical care medicine ,Review Article ,General Medicine ,Odds ratio ,030204 cardiovascular system & hematology ,Intensive care unit ,Confidence interval ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,law ,Internal medicine ,Meta-analysis ,medicine ,lipids (amino acids, peptides, and proteins) ,cardiovascular diseases ,Prospective cohort study ,business ,Cohort study - Abstract
The effect of prior statin exposure in critically ill patients remains controversial and has not been established in previous cohort studies. We performed a systematic review of previous cohort studies to evaluate the association of prior statin therapy with mortality in critically ill patients and conducted a meta-analysis. The MEDLINE, EMBASE, and Cochrane CENTRAL databases, from their inception to January 7, 2020, were used for this study. Statin users were defined as patients prescribed statin regularly before intensive care unit admission or diagnosis of a specific disease, such as sepsis. The Cochran chi-square test and I statistics were used to determine heterogeneity between studies. In total, 199,985 critically ill patients from nine studies (44,582 statin users and 155,403 non-statin users) were included in the meta-analysis. According to the random effect model, the 30-day mortality of statin users was 31% lower than that of non-statin users (hazard ratio: 0.69, 95% confidence interval: 0.56 to 0.85). This association was similar in atorvastatin users and simvastatin users. However, hospital mortality in statin users was not significantly associated with that in non-statin users [odds ratios (ORs): 0.71, 95% CI: 0.42 to 1.21]. This study showed that there was a beneficial association of prior statin therapy with 30-day mortality in critically ill patients. However, there was no significant association with hospital mortality. Additional prospective cohort studies with a large sample size should be performed to confirm these findings.
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- 2020
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48. Characteristics and Treatment Patterns of Patients with Advanced Soft Tissue Sarcoma in Korea
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Hyo Song Kim, Seonmin Kim, Maria Victoria Moneta, Sunkyu Choi, Minkyung Han, Sun Young Rha, Chung Mo Nam, Sae Young Lee, Diego Novick, Suk Yong Jang, and J. Cho
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0301 basic medicine ,Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Disease status ,Epidemiology ,Cohort Studies ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Age Distribution ,Internal medicine ,Republic of Korea ,Medicine ,Humans ,Treatment pattern ,Anthracyclines ,Survival rate ,Aged ,Aged, 80 and over ,business.industry ,Incidence (epidemiology) ,Soft tissue sarcoma ,Incidence ,Modality ,Cancer ,Sarcoma ,Advanced soft tissue sarcoma ,Middle Aged ,medicine.disease ,Survival Analysis ,030104 developmental biology ,Treatment Outcome ,National health insurance ,030220 oncology & carcinogenesis ,Cohort ,Female ,Original Article ,business ,Korean population - Abstract
Purpose A soft tissue sarcoma (STS) is a rare type of cancer, accounting for 1% of adult solid cancers. The aim of the present study is to determine the incidence of localized and advanced STS in Korean patients, their treatment patterns, and the survival of patients by disease status. Materials and methods The STS patient cohort was defined using National Health Insurance Service medical data from 2002 to 2015. Incidence, distribution, anatomical location of tumors, survival rates (Kaplan-Meyer survival function) and treatment patterns were analyzed by applying different algorithms to the STS cohort containing localized and advanced STS cases. Results A total of 7,813 patients were diagnosed with STS from 2007 to 2014, 4,307 were localized STS and 3,506 advanced STS cases. The total incidence of STS was 2.49 per 100,000 person- years: 1.37 per 100,000 person-years for localized STS and 1.12 per 100,000 person-years for advanced STS. The 5-year survival rate after diagnosis was 56.4% for all STS, 82.4% for localized, and 27.2% for advanced STS. Half of the advanced STS patients (49.98%) received anthracycline-containing chemotherapy as initial treatment after diagnosis. Conclusion This study provides insights into localized and advanced STS epidemiology, treatment patterns and outcomes in Korea, which could be used as fundamental data in improving clinical outcomes of STS patients in the future.
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- 2018
49. 3D Culture Protocol for Testing Gene Knockdown Efficiency and Cell Line Derivation
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Sunkyu Choi, Marian Grendar, Sang Myung Woo, Ken Fujimura, Huawei Wang, and Jan Strnadel
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0301 basic medicine ,Gene knockdown ,Cell signaling ,Strategy and Management ,Mechanical Engineering ,Metals and Alloys ,Cancer ,Biology ,medicine.disease ,Industrial and Manufacturing Engineering ,In vitro ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Cancer stem cell ,Cell culture ,In vivo ,030220 oncology & carcinogenesis ,medicine ,Methods Article ,Gene silencing - Abstract
Traditional 2D cell cultures with cells grown as monolayers on solid surface still represent the standard method in cancer research for drug testing. Cells grown in 2D cultures, however, lack relevant cell-matrix and cell-cell interactions and ignore the true three-dimensional anatomy of solid tumors. Cells cultured in 2D can also undergo cytoskeletal rearrangements and acquire artificial polarity associated with aberrant gene expression ( Edmondson et al., 2014 ). 3D culture systems that better mimic the in vivo situation have been developed recently. 3D in vitro cancer models (tumorspheres) for studying cancer stem cells have gained increased popularity in the field ( Weiswald et al., 2015 ). Systems that use matrix-embedded or encapsulated spheroids, spheroids cultured in hanging drops, magnetic levitation systems or 3D printing methods are already being widely used in research and for novel drug screening. In this article, we describe a detailed protocol for testing the effect of shRNA-mediated gene silencing on tumorsphere formation and growth. This approach allows researchers to test the impact of gene knockdown on the growth of tumor initiating cells. As verified by our lab, the protocol can be also used for isolation of 3D cancer cell lines directly from tumor tissues.
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- 2018
50. Ideal number of biopsy tumor fragments for predicting HER2 status in gastric carcinoma resection specimens
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Soomin Ahn, Sunkyu Choi, Minju Lee, Byung-Hoon Min, Min Gew Choi, Jun Ho Lee, Sin-Ho Jung, Jae J. Kim, Sung Kim, Jae Moon Bae, Kyoung-Mee Kim, Sang Yun Ha, Hyuk Lee, Sangjeong Ahn, Michael Van Vrancken, Tae Sung Sohn, and Jun Haeng Lee
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Adult ,Male ,medicine.medical_specialty ,Receptor, ErbB-2 ,Biopsy ,medicine.medical_treatment ,Gastric carcinoma ,Resection ,Young Adult ,Gastrectomy ,Predictive Value of Tests ,Stomach Neoplasms ,HER2 ,Gastroscopy ,Biomarkers, Tumor ,medicine ,Carcinoma ,Humans ,skin and connective tissue diseases ,Aged ,Aged, 80 and over ,medicine.diagnostic_test ,business.industry ,Stomach ,Reproducibility of Results ,Cancer ,Middle Aged ,medicine.disease ,Immunohistochemistry ,Surgery ,operation ,medicine.anatomical_structure ,ROC Curve ,Oncology ,Area Under Curve ,Predictive value of tests ,Female ,Radiology ,Clinical Research Paper ,business ,stomach - Abstract
// Sangjeong Ahn 1, 6, * , Soomin Ahn 1, 2, * , Michael Van Vrancken 1, * , Minju Lee 1 , Sang Yun Ha 1 , Hyuk Lee 3 , Byung-Hoon Min 3 , Jun Haeng Lee 3 , Jae J. Kim 3 , Sunkyu Choi 4 , Sin-Ho Jung 4 , Min Gew Choi 5 , Jun-Ho Lee 5 , Tae Sung Sohn 5 , Jae Moon Bae 5 , Sung Kim 5 , Kyoung-Mee Kim 1, 2 1 Department of Pathology & Translational Genomics, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea 2 Center for Companion Diagnostics, Innovative Cancer Medicine Institute, Samsung Medical Center, Seoul, Korea 3 Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea 4 Biostatistics and Clinical Epidemiology Center, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea 5 Department of Surgery, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea 6 Present address: Department of Pathology, Pusan National University Hospital and Pusan National University School of Medicine and BioMedical Research Institute, Pusan National University Hospital, Busan, Korea * These authors have contributed equally to this work Correspondence to: Kyoung-Mee Kim, e-mail: kkmkys@skku.edu Keywords: stomach, biopsy, operation, HER2, immunohistochemistry Received: June 29, 2015 Accepted: September 29, 2015 Published: October 09, 2015 ABSTRACT Intratumoral heterogeneity of HER2 expression is common in gastric cancers and pose a challenge for identifying patients who would benefit from anti-HER2 therapy. The aim of this study is to compare HER2 expression in biopsy and resection specimens of gastric carcinoma by immunohistochemistry (IHC) and to find the ideal number of biopsy tumor fragments that can accurately predict HER2 overexpression in the corresponding surgically resected specimen. The HER2 IHC results of 702 paired biopsy and resection specimens of gastric cancer were compared. The mean number of biopsy fragments among all cases was 4.3 (range 1–11). HER2 was positive in 130 (18.5%) endoscopic biopsies and in 102 (14.5%) gastrectomy specimens. Intratumoral heterogeneity of HER2 was found in 80 (61.5%) biopsies and 70 (68.6%) resection specimens. Out of the 70 surgical specimens with intratumoral heterogeneity, 24 (34.3%) of the corresponding biopsies were categorized as negative (positive conversion). In the 86 (12.3%) discrepant cases, negative conversion was observed in 57 (66.3%) cases and positive conversion in 29 (33.7%). The fragment numbers were significantly correlated with the discrepancy of results and positive predictability ( P = 0.0315 and P = 0.0052). ROC curve analysis and positive predictability showed that 4 fragments should be obtained to minimize the differences in HER2 scores between biopsy and resection specimen. In gastric carcinomas with discrepant HER2 results between biopsy and surgical resection specimens, intratumoral heterogeneity is common with most of them showing positive conversion. To predict HER2 status precisely, at least 4 biopsy fragments containing tumor cells are required.
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- 2015
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