76 results on '"Sumitani J"'
Search Results
2. Need for improvements in clinical practice to retain patients in pre-antiretroviral therapy care: Data from rural clinics in North West Province, South Africa
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Gilvydis, JM, Steward, WT, Saberi, P, Tumbo, J, Sumitani, J, Barnhart, S, and Lippman, SA
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Public Health and Health Services ,Psychology ,Public Health - Abstract
We examined current challenges with patient engagement in HIV prevention and care in South Africa by assessing the procedures of eight public health clinics in the North West Province. Procedures consisted of (1) an inventory/audit of the HIV Counseling and Testing, pre-antiretroviral therapy (pre-ART), and antiretroviral therapy (ART) patient registers; (2) extraction of data from a convenience sample of 39 HIV-positive patient files; and (3) 13 key informant interviews with clinic staff to characterize retention and re-engagement practices for patients. Incomplete registers revealed little evidence of follow-up services, particularly for pre-ART patients. The more detailed examination of patient files indicated substantial disparities in the proportion of pre-ART versus ART patients retained in care. Key informant interviews contextualized the data, with providers describing multiple procedures for tracking and ensuring service delivery for ART patients and fewer procedures to retain pre-ART patients. These findings suggest that enhanced strategies are needed for ensuring continued engagement in HIV care, with a particular emphasis on improving the retention of pre-ART patients. The preventive benefits of ART scale-up may not be achieved if improvements are not made in the proportion of earlier-stage HIV-positive patients who are successfully engaged in care.
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- 2015
3. Characterization and gene cloning of a maltotriose-forming exo-amylase from Kitasatospora sp. MK-1785
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Kamon, Masahiro, Sumitani, Jun-ichi, Tani, Shuji, Kawaguchi, Takashi, Kamon, M., Sumitani, J., Tani, S., and Kawaguchi, T.
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- 2015
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4. HIV-Related Pulmonary Disease and All-Cause Mortality in a Primary Care Setting
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Harrington, K., primary, Staitieh, B.S., additional, Nguyen, M.L.T., additional, Colasanti, J.A., additional, Sumitani, J., additional, Marconi, V.C., additional, and Auld, S., additional
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- 2021
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5. Pulmonary Symptoms, Evaluations, and Diagnoses in People with HIV
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Harrington, K., primary, Staitieh, B.S., additional, Nguyen, M., additional, Colasanti, J., additional, Sumitani, J., additional, and Auld, S., additional
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- 2020
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6. Development of an efficient production method for β-mannosidase by the creation of an overexpression system in Aspergillus aculeatus
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Kanamasa, S., Kawaguchi, T., Takada, G., Kajiwara, S., Sumitani, J., and Arai, M.
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- 2007
7. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with castanospermine
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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8. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with D-glucose
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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9. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with calystegine B(2)
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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10. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with 1-deoxynojirimycin
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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11. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with thiocellobiose
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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12. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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13. Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine
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Suzuki, K., primary, Sumitani, J., additional, Kawaguchi, T., additional, and Fushinobu, S., additional
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- 2013
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14. Development of an efficient production method for ?-mannosidase by the creation of an overexpression system in Aspergillus aculeatus
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Kanamasa, S., primary, Kawaguchi, T., additional, Takada, G., additional, Kajiwara, S., additional, Sumitani, J., additional, and Arai, M., additional
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- 2007
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15. Cytodiagnosis of uterine cancer in our cancer clinic
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Akasu, F., primary, Ishikawa, H., additional, Sumitani, J., additional, Hisae, S., additional, and Kontani, A., additional
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- 1967
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16. Cloning and sequencing of the cDNA encoding -glucosidase 1 from Aspergillus aculeatus
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Kawaguchi, T., Enoki, T., Tsurumaki, S., Sumitani, J.-I., Ueda, M., Ooi, T., and Arai, M.
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- 1996
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17. Ignition timing control apparatus for an internal combustion engine
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Sumitani, J
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- 1988
18. Fuel supply control apparatus for internal combustion engine
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Sumitani, J
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- 1988
19. Fuel control apparatus for a fuel injection system of an internal combustion engine
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Sumitani, J
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- 1988
20. Early Implementation and Outcomes Among People with HIV Who Accessed Long-Acting Injectable Cabotegravir/Rilpivirine at Two Ryan White Clinics in the U.S. South.
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Haser GC, Balter L, Gurley S, Thomas M, Murphy T, Sumitani J, Leue EP, Hollman A, Karneh M, Wray L, Washington M, Corbin-Johnson D, Condra A, Niles-Carnes L, Smith BL, Armstrong WS, Kalokhe AS, Colasanti JA, and Collins LF
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The use of long-acting injectable cabotegravir/rilpivirine (LAI-CAB/RPV) as maintenance therapy for persons with HIV (PWH), which may improve treatment access and outcomes, though real-world data on uptake are limited, was studied at two Ryan White clinics in Atlanta, Georgia. Among PWH referred from 4/1/2021 to 9/15/2022 to switch to LAI-CAB/RPV, characteristics were ascertained at time of referral; and disposition (initiated; ineligible; uninterested; pending) was recorded as of 9/15/2022. Among patients initiated on CAB/RPV, we assessed the drug procurement process and clinical outcomes through 6/1/2023. Among 149 PWH referred, 74/149 (50%) initiated CAB/RPV as of 9/15/2022, of whom, characteristics were median age 47 (Q1-Q3 36-55) years, 16% cisgender female, 72% Black race, median HIV duration 15 (Q1-Q3 9-19) years, and 64% had commercial health insurance. Of the 75 PWH not initiated, 35 were ineligible owing to a clinical concern ( n = 16) or insurance issue ( n = 19); 15 patients changed their mind about switching; and 25 were pending eligibility review or therapy initiation. Median time from CAB/RPV prescription to initiation was 46 (Q1-Q3 29-78) days. Of 731 total injections administered (median 11 injections/patient), 95% were given within 7 days of the target treatment date. Nearly all patients were virally suppressed upon referral and remained suppressed through follow-up. At two clinics in the U.S. South, half of the patients referred for LAI-CAB/RPV successfully accessed therapy nearly 2 years after U.S. drug approval. We identified barriers to uptake at the patient and structural levels, highlighting key areas to invest resource and personnel support to sustain and scale long-acting antiretroviral therapy programming.
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- 2024
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21. Clinic-level complexities prevent effective engagement of people living with HIV who are out-of-care.
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Dutta S, Pulsifer BH, Dance KV, Leue EP, Beaupierre M, Lowman K, Sales JM, Strahm M, Sumitani J, Colasanti JA, and Kalokhe AS
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- Humans, Female, Male, Adult, Middle Aged, Health Services Accessibility, Patient Acceptance of Health Care psychology, Qualitative Research, United States, Social Stigma, Ambulatory Care Facilities, HIV Infections psychology, HIV Infections epidemiology
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Approximately half of people living with HIV (PLWH) in the United States are not retained in HIV care. Although numerous studies have identified individual-level barriers to care (i.e., substance abuse, mental health, housing, transportation challenges), less is known about institutional-level barriers. We aimed to identify clinic-level barriers to HIV care and strategies to address them to better engage PLWH who have been out of care (PLWH-OOC). As part of a larger qualitative study in a Ryan White-funded HIV Clinic in Atlanta, which aimed to understand the acceptance and feasibility of community-based HIV care models to better reach PLWH-OOC, we explored barriers and facilitators of HIV care engagement. From October 2022-March 2023, 18 in-depth-interviews were conducted with HIV-care providers, administrators, social workers, and members of a Community Advisory Board (CAB) comprised of PLWH-OOC. Transcripts were coded by trained team members using a consensus approach. Several clinic-level barriers emerged: 1) the large burden placed on patients to provide proof of eligibility to receive Ryan White Program services, 2) inflexibility of provider clinic schedules, 3) inadequate processes to identify patients at risk of disengaging from care, 4) poorly-resourced hospital-to-clinic transitions, 5) inadequate systems to address primary care needs outside of HIV care, and 6) HIV stigma among medical professionals. Strategies to address these barriers included: 1) colocation of HIV and non-HIV services, 2) community-based care options that do not require patients to navigate complex transportation systems, 3) hospital and community-based peer navigation services, 4) dedicated staffing to identify and support PLWH-OOC, and 5) enhanced systems support to help patients collect the high burden of documentation required to receive subsidized HIV care. Several systems-level HIV care barriers exist and intersect with individual and community-level barriers to disproportionately affect HIV care engagement among PLWH-OOC. Findings suggest several strategies that should be considered to reach the remaining 50% of PLWH who remain out-of-care., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Dutta et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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22. Cost Analysis of Short Messaging Service and Peer Navigator Interventions for Linking and Retaining Adults Recently Diagnosed With HIV in Care in South Africa.
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Shade SB, Gutin SA, Agnew E, Grignon JS, Gilmore H, Ratlhagana MJ, Sumitani J, Steward WT, and Lippman SA
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- Adult, Humans, South Africa, Costs and Cost Analysis, Data Collection, Text Messaging, HIV Infections diagnosis
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Introduction: Large proportions of people living with HIV (PLHIV) in sub-Saharan Africa are not linked to or retained in HIV care. There is a critical need for cost-effective interventions to improve engagement and retention in care and inform optimal allocation of resources., Methods: We estimated costs associated with a short message service (SMS) plus peer navigation (SMS+PN) intervention; an SMS-only intervention; and standard of care (SOC), within the I-Care cluster-randomized trial to improve HIV care engagement for recently diagnosed PLHIV. We employed a uniform cost data-collection protocol to quantify resources used and associated costs for each intervention., Results: Compared with SOC, the SMS+PN intervention cost $1284 ($828-$2859) more per additional patient linked to care within 30 days and $1904 ($1158-$5343) more per additional patient retained in care at 12 months, while improving linkage by 24% (95% CI: 11 to 36) and retention by 16% (95% CI: 6 to 26). By contrast, the SMS-only intervention cost $198 ($93-dominated) more per additional patient linked to care and $697 ($171-dominated) more per additional patient retained in care but was not significantly associated with improvements in linkage (12%; 95% CI: -1 to 25) or retention (3%; 95% CI: -7 to 14) compared with SOC. The efficiency of the SMS+PN intervention could be improved by 46%, to $690 more per additional patient linked and $1023 more per additional patient retained in care, if implemented within the Department of Health using more efficient distribution of staff resources., Discussion: Findings suggest that scale-up of the SMS+PN intervention could benefit patients, improving care and health outcomes while being cost-effective., Competing Interests: The authors have no funding or conflicts of interest to disclose., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2024
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23. The CARES Program: Improving Viral Suppression and Retention in Care Through a Comprehensive Team-Based Approach to Care for People with HIV and Complex Psychosocial Needs.
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Sweitzer S, Giegold M, Chen Y, Farber EW, Sumitani J, Henderson A, Easley K, Armstrong WS, Colasanti JA, Ammirati RJ, and Marconi VC
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- Humans, Viral Load, Retention in Care, HIV Infections drug therapy, HIV Infections psychology
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Retention in HIV care and viral suppression rates remain suboptimal, especially among people with HIV (PWH) facing complex barriers to care such as mental health conditions, substance use disorders, and housing insecurity. The Center for Adherence, Retention, and Engagement Support (CARES) program utilizes an interdisciplinary team that delivers integrated services in a drop-in setting to provide individualized care to PWH with complex psychosocial needs. We describe the CARES program and evaluate its effectiveness in retaining patients in care to achieve virological suppression. We characterized 119 referrals of PWH experiencing homelessness, mental health conditions, and substance use disorders to CARES between 2011 and 2017, and collected data for a 24-month observation period through 2019. Outcomes of patients who participated in CARES were compared with those who were referred but did not participate. The primary outcome was viral suppression (<200 copies/mL) at least once during 2-year follow-up. Retention in care (≥2 completed medical visits ≥90 days apart in each year post-referral) was a secondary outcome. Of 119 PWH referred to CARES, 59 participated with ≥2 visits. Those who participated in CARES were more likely to achieve viral suppression [adjusted odds ratio (aOR) 3.50, 95% confidence interval (CI) 1.19-10.32] and to be retained in care (aOR 3.73, 95% CI 1.52-9.14) compared with those who were referred but did not participate. This analysis found that the CARES program improved retention in care and viral suppression among PWH with complex psychosocial needs and suggests that it may represent a useful model for future programming.
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- 2023
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24. Impact of short message service and peer navigation on linkage to care and antiretroviral therapy initiation in South Africa.
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Lippman SA, de Kadt J, Ratlhagana MJ, Agnew E, Gilmore H, Sumitani J, Grignon J, Gutin SA, Shade SB, Gilvydis JM, Tumbo J, Barnhart S, and Steward WT
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- Male, Adult, Female, Humans, Pregnancy, South Africa, Cluster Analysis, HIV Infections drug therapy, Anti-HIV Agents therapeutic use, Text Messaging
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Objective: We examine the efficacy of short message service (SMS) and SMS with peer navigation (SMS + PN) in improving linkage to HIV care and initiation of antiretroviral therapy (ART)., Design: I-Care was a cluster randomized trial conducted in primary care facilities in North West Province, South Africa. The primary study outcome was retention in HIV care; this analysis includes secondary outcomes: linkage to care and ART initiation., Methods: Eighteen primary care clinics were randomized to automated SMS ( n = 7), automated and tailored SMS + PN ( n = 7), or standard of care (SOC; n = 4). Recently HIV diagnosed adults ( n = 752) were recruited from October 2014 to April 2015. Those not previously linked to care ( n = 352) contributed data to this analysis. Data extracted from clinical records were used to assess the days that elapsed between diagnosis and linkage to care and ART initiation. Cox proportional hazards models and generalized estimating equations were employed to compare outcomes between trial arms, overall and stratified by sex and pregnancy status., Results: Overall, SMS ( n = 132) and SMS + PN ( n = 133) participants linked at 1.28 [95% confidence interval (CI): 1.01-1.61] and 1.60 (95% CI: 1.29-1.99) times the rate of SOC participants ( n = 87), respectively. SMS + PN significantly improved time to ART initiation among non-pregnant women (hazards ratio: 1.68; 95% CI: 1.25-2.25) and men (hazards ratio: 1.83; 95% CI: 1.03-3.26) as compared with SOC., Conclusion: Results suggest SMS and peer navigation services significantly reduce time to linkage to HIV care in sub-Saharan Africa and that SMS + PN reduced time to ART initiation among men and non-pregnant women. Both should be considered candidates for integration into national programs., Trial Registration: NCT02417233, registered 12 December 2014; closed to accrual 17 April 2015., (Copyright © 2022 The Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2023
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25. Prevalence, motivation, and outcomes of clinic transfer in a clinical cohort of people living with HIV in North West Province, South Africa.
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Leslie HH, Mooney AC, Gilmore HJ, Agnew E, Grignon JS, deKadt J, Shade SB, Ratlhagana MJ, Sumitani J, Barnhart S, Steward WT, and Lippman SA
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- Pregnancy, Female, Young Adult, Humans, South Africa epidemiology, Motivation, Prevalence, Ambulatory Care Facilities, HIV Infections epidemiology, HIV Infections therapy, HIV Infections diagnosis, Anti-HIV Agents therapeutic use
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Introduction: Continuity of care is an attribute of high-quality health systems and a necessary component of chronic disease management. Assessment of health information systems for HIV care in South Africa has identified substantial rates of clinic transfer, much of it undocumented. Understanding the reasons for changing sources of care and the implications for patient outcomes is important in informing policy responses., Methods: In this secondary analysis of the 2014 - 2016 I-Care trial, we examined self-reported changes in source of HIV care among a cohort of individuals living with HIV and in care in North West Province, South Africa. Individuals were enrolled in the study within 1 year of diagnosis; participants completed surveys at 6 and 12 months including items on sources of care. Clinical data were extracted from records at participants' original clinic for 12 months following enrollment. We assessed frequency and reason for changing clinics and compared the demographics and care outcomes of those changing and not changing source of care., Results: Six hundred seventy-five (89.8%) of 752 study participants completed follow-up surveys with information on sources of HIV care; 101 (15%) reported receiving care at a different facility by month 12 of follow-up. The primary reason for changing was mobility (N=78, 77%). Those who changed clinics were more likely to be young adults, non-citizens, and pregnant at time of diagnosis. Self-reported clinic attendance and ART adherence did not differ based on changing clinics. Those on ART not changing clinics reported 0.66 visits more on average than were documented in clinic records., Conclusion: At least 1 in 6 participants in HIV care changed clinics within 2 years of diagnosis, mainly driven by mobility; while most appeared lost to follow-up based on records from the original clinic, self-reported visits and adherence were equivalent to those not changing clinics. Routine clinic visits could incorporate questions about care at other locations as well as potential relocation, particularly for younger, pregnant, and non-citizen patients, to support existing efforts to make HIV care records portable and facilitate continuity of care across clinics., Trial Registration: The original trial was registered with ClinicalTrials.gov , NCT02417233, on 12 December 2014., (© 2022. The Author(s).)
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- 2022
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26. Early Experience Implementing Long-Acting Injectable Cabotegravir/Rilpivirine for Human Immunodeficiency Virus-1 Treatment at a Ryan White-Funded Clinic in the US South.
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Collins LF, Corbin-Johnson D, Asrat M, Morton ZP, Dance K, Condra A, Jenkins K, Todd-Turner M, Sumitani J, Smith BL, Armstrong WS, and Colasanti JA
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Background: Long-acting injectable (LAI) antiretroviral therapy (ART) has the potential to improve medication adherence, reduce human immunodeficiency virus (HIV) stigma, and promote equity in care outcomes among people with HIV (PWH). We describe our early experience implementing LAI-cabotegravir/rilpivirine (CAB/RPV) for maintenance HIV-1 treatment., Methods: We launched a pilot LAI-ART program at a large Ryan White-funded clinic in the Southeast, which accept provider-initiated referrals from April 14, 2021 to December 1, 2021. Our interdisciplinary program team (Clinician-Pharmacy-Nursing) verified clinical eligibility and pursued medication access for eligible patients. We describe (1) demographic and clinical variables of PWH referred and enrolled and (2) early outcomes among those accessing LAI-CAB/RPV., Results: Among 58 referrals, characteristics were median age 39 (Q1-Q3, 30.25-50) years, 74% male, and 81% Black, and payor source distribution was 26% Private, 21% Medicare, 19% Medicaid, and 34% AIDS Drugs Assistance Program. Forty-five patients (78%) met clinical eligibility for LAI-CAB/RPV; ineligibility concerns included evidence of confirmed or possible RPV resistance ( n = 8), HIV nonsuppression ( n = 3), possible RPV hypersensitivity ( n = 1), and pregnancy ( n = 1). Among 45 eligible PWH, 39 (87%) enrolled and 15 (38%) initiated LAI-CAB/RPV after a median of 47 (Q1-Q3, 31-95) days since enrollment., Conclusions: Implementing LAI-ART at a Southern US Ryan White-funded clinic has been challenged by the following: substantial human resource capital to attain drug, administer injections, and support enrolled patients; delayed therapy initiation due to insurance denials; patient ineligibility primarily due to possible RPV resistance; and inability to provide drug regardless of payor source. These barriers may perpetuate disparities in ART access and outcomes among PWH and should be urgently addressed so that LAI-ART can be offered equitably., (© The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
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- 2022
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27. Patient Experiences with Telemedicine for HIV Care During the First COVID-19 Wave in Atlanta, Georgia.
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Galaviz KI, Shah NS, Gutierrez M, Collins LF, Lahiri CD, Moran CA, Szabo B, Sumitani J, Rhodes J, Marconi VC, Nguyen ML, Cantos VD, Armstrong WS, and Colasanti JA
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- Adult, Female, Georgia epidemiology, Humans, Male, Middle Aged, Pandemics, Patient Outcome Assessment, Patient Satisfaction, SARS-CoV-2, COVID-19, HIV Infections drug therapy, HIV Infections epidemiology, Telemedicine
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We explored experiences with telemedicine among persons with HIV (PWH) during the first wave of the coronavirus disease 2019 (COVID-19) pandemic. A convenience sample of adults (>18 years) receiving care in an urban clinic in Atlanta were invited to participate. Patients completed a structured survey that assessed the usefulness, quality, satisfaction, and concerns with telemedicine services (telephone calls) received during the first wave of the COVID-19 pandemic (March-May 2020). Demographic, plasma HIV-1 RNA, and CD4
+ T cell count data were obtained through medical chart abstraction. Bootstrapped t -tests and chi-square tests were used to examine differences in patient experiences by age, sex, and race. Of 406 PWH contacted, 101 completed the survey (median age 55 years, 84% men, 77% Black, 98% virally suppressed, median CD4 count 572 cells/μL). The main HIV care disruptions experienced were delays in follow-up visits (40%), difficulty getting viral load measured (35%), and difficulty accessing antiretroviral therapy (21%). Participant ratings for quality (median score 6.5/7), usefulness (median score 6.0/7), and satisfaction (median score 6.3/7) with telemedicine were high. However, 28% of patients expressed concerns about providers' ability to examine them and about the lack of laboratory tests. More women had concerns about providers' ability to examine them (92% vs. 50%, p = .005) and about the safety of their personal information (69% vs. 23%, p = .002) compared with men. No age or race differences were observed. Although PWH are generally satisfied with telephone-based telemedicine, concerns with its use were notable, particularly among women. Future HIV telemedicine models should address these.- Published
- 2022
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28. Impact of SMS and peer navigation on retention in HIV care among adults in South Africa: results of a three-arm cluster randomized controlled trial.
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Steward WT, Agnew E, de Kadt J, Ratlhagana MJ, Sumitani J, Gilmore HJ, Grignon J, Shade SB, Tumbo J, Barnhart S, and Lippman SA
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- Adult, Appointments and Schedules, Counseling, Humans, South Africa, HIV Infections drug therapy, Text Messaging
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Introduction: Few interventions have demonstrated improved retention in care for people living with HIV (PLHIV) in sub-Saharan Africa. We tested the efficacy of two personal support interventions - one using text messaging (SMS-only) and the second pairing SMS with peer navigation (SMS+PN) - to improve HIV care retention over one year., Methods: In a cluster randomized control trial (NCT# 02417233) in North West Province, South Africa, we randomized 17 government clinics to three conditions: SMS-only (6), SMS+PN (7) or standard of care (SOC; 4). Participants at SMS-only clinics received appointment reminders, biweekly healthy living messages and twice monthly SMS check-ins. Participants at SMS+PN clinics received SMS appointment reminders and healthy living messages and spoke at least twice monthly with peer navigators (PLHIV receiving care) to address barriers to care. Outcomes were collected through biweekly clinical record extraction and surveys at baseline, six and 12 months. Retention in HIV care over one year was defined as clinic visits every three months for participants on antiretroviral therapy (ART) and CD4 screening every six months for pre-ART participants. We used generalized estimating equations, adjusting for clustering by clinic, to test for differences across conditions., Results: Between October 2014 and April 2015, we enrolled 752 adult clients recently diagnosed with HIV (SOC: 167; SMS-only: 289; SMS+PN: 296). Individuals in the SMS+PN arm had approximately two more clinic visits over a year than those in other arms (p < 0.01) and were more likely to be retained in care over one year than those in SOC clinics (54% vs. 38%; OR: 1.77, CI: 1.02, 3.10). Differences between SMS+PN and SOC conditions remained significant when restricting analyses to the 628 participants on ART (61% vs. 45% retained; OR: 1.78, CI: 1.08, 2.93). The SMS-only intervention did not improve retention relative to SOC (40% vs. 38%, OR: 1.12, CI: 0.63, 1.98)., Conclusions: A combination of SMS appointment reminders with personalized, peer-delivered support proved effective at enhancing retention in HIV care over one year. While some clients may only require appointment reminders, the SMS+PN approach offers increased flexibility and tailored, one-on-one support for patients struggling with more substantive challenges., (© 2021 The Authors. Journal of the International AIDS Society published by John Wiley & Sons Ltd on behalf of International AIDS Society.)
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- 2021
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29. Diagnosis and Management of HIV-Associated Pulmonary Diseases in a Ryan White-Funded Primary Care Setting.
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Harrington KRV, Staitieh BS, Nguyen MLT, Colasanti JA, Sumitani J, Marconi VC, and Auld SC
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- Cohort Studies, Humans, Male, Middle Aged, Primary Health Care, Smoking, United States epidemiology, HIV Infections complications, HIV Infections drug therapy, Lung Diseases diagnosis, Lung Diseases epidemiology
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Despite widespread use of antiretroviral therapy (ART), people with HIV (PWH) continue to suffer substantial morbidity and mortality from pulmonary diseases. We sought to evaluate the prevalence of pulmonary symptoms, evaluations, and diagnoses (both infectious and noninfectious) among PWH receiving care at one of the largest HIV clinics in the United States. All PWH seen at the Infectious Disease Program in Atlanta, Georgia, from July 2013 to June 2018 were included. Multivariable logistic regression was used to assess the odds of all-cause mortality. Among 8387 patients, median age was 48 years, 35% had documented smoking, 74% were male, and the 47% with ≥1 pulmonary symptom or diagnosis were older and had higher rates of smoking compared to those without any symptoms or diagnoses ( p -values <0.0001). Percent on ART was 97% and 81% for individuals with and without symptoms or diagnoses, respectively ( p -value <0.0001). Patients with an infectious diagnosis were more likely to have a diagnostic test ordered than those with a noninfectious diagnosis ( p -value <0.0001). After adjustment for demographic and clinical risk factors, odds of death were 2.1 times greater [95% confidence interval (CI) = 1.3-3.5] among those with a pulmonary symptom or diagnosis compared to those without. Despite a high prevalence of pulmonary symptoms and diagnoses in this large cohort of PWH, many did not have a complete diagnostic evaluation, particularly those with noninfectious diagnoses. Greater awareness of evaluation and treatment of noninfectious pulmonary diseases among HIV care providers will be critical to improving long-term outcomes for PWH.
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- 2021
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30. Implementation of a Rapid Entry Program Decreases Time to Viral Suppression Among Vulnerable Persons Living With HIV in the Southern United States.
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Colasanti J, Sumitani J, Mehta CC, Zhang Y, Nguyen ML, Del Rio C, and Armstrong WS
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Background: Rapid entry programs (REPs) improve time to antiretroviral therapy (ART) initiation (TAI) and time to viral suppression (TVS). We assessed the feasibility and effectiveness of a REP in a large HIV clinic in Atlanta, Georgia, serving a predominately un- or underinsured population., Methods: The Rapid Entry and ART in Clinic for HIV (REACH) program was implemented on May 16, 2016. We performed a retrospective cohort study with the main independent variable being period of enrollment: January 1, 2016, through May 15, 2016 (pre-REACH); May 16, 2016, through July 31, 2016 (post-REACH). Included individuals were HIV-infected and new to the clinic with detectable HIV-1 RNA. Six-month follow-up data were collected for each participant. Survival analyses were conducted for TVS. Logistic and linear regression analyses were used to evaluate secondary outcomes: attendance at first clinic visit, viral suppression, TAI, and time to first attended provider visit., Results: There were 117 pre-REACH and 90 post-REACH individuals. Median age (interquartile range [IQR]) was 35 (25-45) years, 80% were male, 91% black, 60% men who have sex with men, 57% uninsured, and 44% active substance users. TVS decreased from 77 (62-96) to 57 (41-70) days ( P < .0022). Time to first attended provider visit decreased from 17 to 5 days, and TAI from 21 to 7 days ( P < .0001), each remaining significant in adjusted models., Conclusions: This is the largest rapid entry cohort described in the United States and suggests that rapid entry is feasible and could have a positive impact on HIV transmission at the population level.
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- 2018
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31. Engaging HIV-positive clients in care: acceptability and mechanisms of action of a peer navigation program in South Africa.
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Steward WT, Sumitani J, Moran ME, Ratlhagana MJ, Morris JL, Isidoro L, Gilvydis JM, Tumbo J, Grignon J, Barnhart S, and Lippman SA
- Subjects
- Ambulatory Care Facilities, Anti-Retroviral Agents administration & dosage, Counseling, Feasibility Studies, Female, Humans, Male, Medication Adherence, Middle Aged, Pilot Projects, South Africa, Anti-Retroviral Agents therapeutic use, HIV Infections drug therapy, Patient Acceptance of Health Care statistics & numerical data, Patient Navigation methods, Peer Group, Social Stigma
- Abstract
Antiretroviral therapy (ART) could curtail the HIV epidemic, but its impact is diminished by low uptake. We developed a peer navigation program to enhance engagement in HIV care, ART adherence, and behavioral prevention. In preparation for a randomized controlled trial, the program was piloted over four months at two primary health clinics in South Africa's North West Province. Newly diagnosed, HIV-positive clients met regularly with navigators to address barriers to care, adherence, and prevention. To assess program acceptability and feasibility and characterize the mechanisms of action, we surveyed 25 clients who completed navigation services and conducted interviews with 10 clients, four navigators, and five clinic providers. Clients expressed near universal approval for the program and were satisfied with the frequency of contact with navigators. HIV stigma emerged as a primary driver of barriers to care. Navigators helped clients overcome feelings of shame through education and by modeling how to live successfully with HIV. They addressed discrimination fears by helping clients disclose to trusted individuals. These actions, in turn, facilitated clients' care engagement, ART adherence, and HIV prevention efforts. The findings suggest peer navigation is a feasible approach with potential to maximize the impact of ART-based HIV treatment and prevention strategies.
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- 2018
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32. Improving Tuberculosis (TB) and Human Immunodeficiency Virus (HIV) Treatment Monitoring in South Africa: Evaluation of an Advanced TB/HIV Course for Healthcare Workers.
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Galagan S, Jed S, Sumitani J, Gilvydis JM, Bakor A, Cooke R, Naidoo E, Winters D, and Weaver MR
- Abstract
Background: South Africa has dual epidemics of human immunodeficiency virus (HIV) and tuberculosis (TB). Nurse-focused training was combined with onsite mentoring for nurses to improve HIV and TB care. A pre-/postevaluation was conducted in 3 districts in South Africa to assess the effects of the course on clinical patient monitoring and integration of TB and HIV care., Methods: Two cross-sectional, unmatched samples of patient charts at 76 primary healthcare facilities were collected retrospectively in 2014 to evaluate the impact of training on treatment monitoring. Proportions of HIV patients receiving a viral load test 6 months after initiating antiretroviral therapy (ART) and TB patients receiving end of intensive phase sputum testing were compared pre- and posttraining. Analysis of creatinine clearance testing and integration of TB and HIV care were also performed., Results: Data were analyzed from 1074 pretraining and 1048 posttraining records among patients initiating ART and from 1063 pretraining and 1008 posttraining among patients initiating TB treatment. Documentation of a 6-month viral load test was 36.3%, and a TB test at end of intensive phase was 70.7%, and neither increased after training. Among patients with a viral load test, the percentage with viral load less than 50 copies/mL increased from 48.6% pretraining compared with 64.2% posttraining ( P = .001). Integration of TB and HIV care such as isoniazid preventive therapy increased significantly., Conclusions: The primary outcome measures did not change after training. However, the evaluation documented many other improvements in TB and HIV care that may have been supported by the course., (© The Author 2016. Published by Oxford University Press on behalf of the Infectious Diseases Society of America.)
- Published
- 2016
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33. Evaluation of short message service and peer navigation to improve engagement in HIV care in South Africa: study protocol for a three-arm cluster randomized controlled trial.
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Lippman SA, Shade SB, Sumitani J, DeKadt J, Gilvydis JM, Ratlhagana MJ, Grignon J, Tumbo J, Gilmore H, Agnew E, Saberi P, Barnhart S, and Steward WT
- Subjects
- Costs and Cost Analysis, Data Collection, Humans, Outcome Assessment, Health Care, Sample Size, South Africa, Clinical Protocols, HIV Infections therapy, Text Messaging
- Abstract
Background: In countries with a high burden of HIV, such as South Africa, where the epidemic remains the world's largest, improving early uptake of and consistent adherence to antiretroviral therapy could bring substantial HIV prevention gains. However, patients are not linked to or retained in care at rates needed to curtail the epidemic. Two strategies that have demonstrated a potential to stem losses along the HIV care cascade in the sub-Saharan African context are use of text messaging or short message service (SMS) and peer-navigation services., Methods/design: We designed a cluster randomized trial to assess the efficacy of an SMS intervention and a peer-navigation intervention to improve retention in care and treatment, timely linkage to care and treatment, medication adherence, and prevention behaviors in South Africa. Eighteen primary and community healthcare clinics in Rustenburg and Moses Kotane Sub-districts in the North West Province were randomized to one of three conditions: SMS intervention (n = 7), peer navigation intervention (n = 7), or standard of care (n = 4). Approximately 42 participants are being recruited at each clinic, which will result in a target of 750 participants. Eligible participants include patients accessing HIV testing or care in a study clinic, recently diagnosed with HIV, aged 18 years or older, and with access to a cellular telephone where they are willing to receive automated SMS with HIV-related messaging. Data collection includes extraction of visit information from clinical files and participant surveys at baseline, 6 months, and 12 months. Intent-to-treat (ITT) analysis will explore differences between randomization arms and the primary outcome of patient retention in care at 12 months following enrollment. We will also explore secondary outcomes including participants' a) timely linkage to care (within 3 months of HIV diagnosis), b) adherence to treatment based on self-report and clinic's medication dispensation dates, and c) condom-use behaviors., Discussion: The findings will allow us to compare the efficacy of two complementary interventions, one that requires fewer resources to implement (SMS) and one (peer navigation) that offers more flexibility in terms of the patient barriers to care that it can address., Trial Registration: NCT02417233, registered 12 December 2014.
- Published
- 2016
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34. Erratum to: characterization and gene cloning of a maltotriose-forming exo-amylase from Kitasatospora sp. MK-1785.
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Kamon M, Sumitani J, Tani S, and Kawaguchi T
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- 2015
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35. Effects of clbR overexpression on enzyme production in Aspergillus aculeatus vary depending on the cellulosic biomass-degrading enzyme species.
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Kunitake E, Kawamura A, Tani S, Takenaka S, Ogasawara W, Sumitani J, and Kawaguchi T
- Subjects
- Aspergillus cytology, Aspergillus metabolism, Cellulase metabolism, Endo-1,4-beta Xylanases metabolism, Gene Expression, Signal Transduction genetics, Aspergillus enzymology, Aspergillus genetics, Biomass, Cellulase biosynthesis, Cellulose metabolism, Endo-1,4-beta Xylanases biosynthesis, Transcription Factors genetics
- Abstract
ClbR is a Zn(II)2Cys6 transcriptional activator that controls the expression of cellulase-related genes in response to Avicel and cellobiose in Aspergillus aculeatus. A clbR-overexpressing strain (clbR-OE) that expresses the clbR gene at levels sevenfold higher than the control strain sustainably produced xylanolytic and cellulolytic activities during 10-day cultivation of A. aculeatus, enabling synchronization of xylanolytic and cellulolytic activities at a maximum level. However, clbR overexpression did not simultaneously increase levels of all xylanolytic and cellulolytic enzymes. Peptide mass fingerprint analysis revealed markedly increased production of FIa-xylanase in clbR-OE, whereas expression of FIII-avicelase and FII-carboxymethyl cellulase was unaffected and expression of hydrocellulase was lower in clbR-OE than in the control. Northern blot analysis confirmed that these effects of clbR overexpression on enzyme production were mediated at the transcriptional level. These data suggest that ClbR participates in diverse signaling pathways to control the expression of cellulosic biomass-degrading enzymes in A. aculeatus.
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- 2015
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36. Crystal structures of glycoside hydrolase family 3 β-glucosidase 1 from Aspergillus aculeatus.
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Suzuki K, Sumitani J, Nam YW, Nishimaki T, Tani S, Wakagi T, Kawaguchi T, and Fushinobu S
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- Carbohydrate Conformation, Carbohydrate Sequence, Catalytic Domain, Crystallography, X-Ray, Fungal Proteins antagonists & inhibitors, Fungal Proteins metabolism, Glycosylation, Ligands, Models, Molecular, Molecular Sequence Data, Polysaccharides chemistry, Protein Conformation, beta-Glucosidase antagonists & inhibitors, beta-Glucosidase metabolism, Aspergillus enzymology, Fungal Proteins chemistry, beta-Glucosidase chemistry
- Abstract
GH3 (glycoside hydrolase family 3) BGLs (β-glucosidases) from filamentous fungi have been widely and commercially used for the supplementation of cellulases. AaBGL1 (Aspergillus aculeatus BGL1) belongs to the GH3 and shows high activity towards cellooligosaccharides up to high degree of polymerization. In the present study we determined the crystal structure of AaBGL1. In addition to the substrate-free structure, the structures of complexes with glucose and various inhibitors were determined. The structure of AaBGL1 is highly glycosylated with 88 monosaccharides (18 N-glycan chains) in the dimer. The largest N-glycan chain comprises ten monosaccharides and is one of the largest glycans ever observed in protein crystal structures. A prominent insertion region exists in a fibronectin type III domain, and this region extends to cover a wide surface area of the enzyme. The subsite +1 of AaBGL1 is highly hydrophobic. Three aromatic residues are present at subsite +1 and are located in short loop regions that are uniquely present in this enzyme. There is a long cleft extending from subsite +1, which appears to be suitable for binding long cellooligosaccharides. The crystal structures of AaBGL1 from the present study provide an important structural basis for the technical improvement of enzymatic cellulosic biomass conversion.
- Published
- 2013
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37. Public health impact of heat-related illness among migrant farmworkers.
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Fleischer NL, Tiesman HM, Sumitani J, Mize T, Amarnath KK, Bayakly AR, and Murphy MW
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- Adolescent, Adult, Aged, Aged, 80 and over, Agricultural Workers' Diseases ethnology, Body Mass Index, Cross-Sectional Studies, Female, Georgia epidemiology, Health Behavior, Health Services Accessibility, Heat Stress Disorders ethnology, Humans, Interviews as Topic, Male, Middle Aged, Risk Factors, Young Adult, Agricultural Workers' Diseases epidemiology, Agriculture statistics & numerical data, Heat Stress Disorders epidemiology, Transients and Migrants statistics & numerical data
- Abstract
Background: Migrant farmworkers are at risk for heat-related illness (HRI) at work., Purpose: The purpose of this study was to determine which risk factors could potentially reduce the prevalence of HRI symptoms among migrant farmworkers in Georgia., Methods: Trained interviewers conducted in-person interviews of adults who attended the South Georgia Farmworker Health Project clinics in June 2011. The analysis was conducted in 2011-2012. Population intervention models were used to assess where the greatest potential impact could be made to reduce the prevalence of HRI symptoms., Results: In total, 405 farmworkers participated. One third of participants had experienced three or more HRI symptoms in the preceding week. Migrant farmworkers faced barriers to preventing HRI at work, including lack of prevention training (77%) and no access to regular breaks (34%); shade (27%); or medical attention (26%). The models showed that the prevalence of three or more HRI symptoms (n=361, 34.3%) potentially could be reduced by increasing breaks in the shade (-9.2%); increasing access to medical attention (-7.3%); reducing soda intake (-6.7%); or increasing access to regular breaks (-6.0%)., Conclusions: Migrant farmworkers experienced high levels of HRI symptoms and faced substantial barriers to preventing these symptoms. Although data are cross-sectional, results suggest that heat-related illness may be reduced through appropriate training of workers on HRI prevention, as well as regular breaks in shaded areas., (Published by Elsevier Inc.)
- Published
- 2013
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38. A novel transcriptional regulator, ClbR, controls the cellobiose- and cellulose-responsive induction of cellulase and xylanase genes regulated by two distinct signaling pathways in Aspergillus aculeatus.
- Author
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Kunitake E, Tani S, Sumitani J, and Kawaguchi T
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- Amino Acid Sequence, Aspergillus growth & development, Cellobiose metabolism, Cellulose metabolism, Cluster Analysis, Culture Media chemistry, DNA, Bacterial genetics, DNA, Fungal chemistry, DNA, Fungal genetics, Molecular Sequence Data, Mutagenesis, Insertional, Phylogeny, Sequence Alignment, Sequence Analysis, DNA, Transformation, Genetic, Aspergillus genetics, Aspergillus metabolism, Cellulase biosynthesis, Gene Expression Regulation, Enzymologic, Gene Expression Regulation, Fungal, Signal Transduction, Transcription Factors metabolism, Xylosidases biosynthesis
- Abstract
The cellobiose- and cellulose-responsive induction of the FIII-avicelase (cbhI), FII-carboxymethyl cellulase (cmc2), and FIa-xylanase (xynIa) genes is not regulated by XlnR in Aspergillus aculeatus, which suggests that this fungus possesses an unknown cellulase gene-activating pathway. To identify the regulatory factors involved in this pathway, we constructed a random insertional mutagenesis library using Agrobacterium tumefaciens-mediated transformation of A. aculeatus NCP2, which harbors a transcriptional fusion between the cbhI promoter (P ( CBHI )) and the orotidine 5'-phosphate decarboxylase gene (pyrG). Of the ~6,000 transformants screened, one 5-FOA-resistant transformant, S4-22, grew poorly on cellulose-containing media and exhibited reduced cellobiose-induced expression of cbhI. Southern blot analysis and nucleotide sequencing of the flanking regions of the T-DNA inserted in S4-22 indicated that the T-DNA was inserted within the coding region of a previously unreported Zn(II)(2)Cys(6)-transcription factor, which we designated the cellobiose response regulator (ClbR). The disruption of the clbR gene resulted in a significant reduction in the expression of cbhI and cmc2 in response to cellobiose and cellulose. Interestingly, the cellulose-responsive induction of FI-carboxymethyl cellulase (cmc1) and FIb-xylanase (xynIb) genes that are under the control of XlnR, was also reduced in the clbR-deficient mutant, but there was no effect on the induction of these genes in response to D-xylose or L-arabinose. These data demonstrate that ClbR participates in both XlnR-dependent and XlnR-independent cellobiose- and cellulose-responsive induction signaling pathways in A. aculeatus.
- Published
- 2013
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39. Reversible impairment of the ku80 gene by a recyclable marker in Aspergillus aculeatus.
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Tani S, Tsuji A, Kunitake E, Sumitani J, and Kawaguchi T
- Abstract
Auxotrophic mutants of Aspergillus can be isolated in the presence of counter-selective compounds, but the process is laborious. We developed a method to enable reversible impairment of the ku80 gene (Aaku80) in the imperfect fungus Aspergillus aculeatus. Aaku80 was replaced with a selection marker, orotidine 5'-phosphate decarboxylase (pyrG), followed by excision of pyrG between direct repeats (DR) to yield the Aaku80 deletion mutant (MR12). The gene-targeting efficiency at the ornithine carbamoyltransferase (argB) locus was drastically elevated from 3% to 96% in MR12. The frequency of marker recycling depended on DR length. One uridine auxotroph was obtained from 3.3 × 105, 1.4 × 105, and 9.2 × 103 conidia from strains harboring 20-, 98-, and 495-bp DRs, respectively. Because these strains maintained the short DRs after 5 d of cultivation, we investigated whether Aaku80 function was disrupted by pyrG insertion with the 20-bp DR and restored after excision of pyrG. The Aaku80 disruption mutant (coku80) was bred by inserting pyrG sandwiched between 20-bp DRs into the second intron of Aaku80, followed by excision of pyrG between the DRs to yield the coku80rec strain. Analyses of homologous recombination frequency and methyl methanesulfonate sensitivity demonstrated that Aaku80 function was disrupted in coku80 but restored in coku80rec. Furthermore, pyrG was maintained in coku80 at least for ten generations. These data indicated that reversible impairment of ku80 in A. aculeatus is useful for functional genomics in cases where genetic segregation is not feasible.
- Published
- 2013
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40. Analysis of the saccharification capability of high-functional cellulase JN11 for various pretreated biomasses through a comparison with commercially available counterparts.
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Kawai T, Nakazawa H, Ida N, Okada H, Tani S, Sumitani J, Kawaguchi T, Ogasawara W, Morikawa Y, and Kobayashi Y
- Subjects
- Cellulose metabolism, Hydrolysis, Polysaccharides metabolism, Recombinant Proteins metabolism, Trichoderma enzymology, Xylose metabolism, Biomass, Cellulase metabolism, Cellulases metabolism
- Abstract
Although the capabilities of Trichoderma reesei cellulases have been greatly improved, these enzymes are still too costly for commercial use. The aim of this research was to assess the biomass saccharification capability of JN11, a recombinant cellulase, compared with that of the commercially available cellulases Accellerase 1500 and Cellic CTec. The activities of JN11, Accellerase 1500, and Cellic CTec were compared by using various types of cellulosic biomass, including rice straw, Erianthus, eucalyptus, and Japanese cedar. JN11 had higher saccharification capability for rice straw, Erianthus, eucalyptus, and Japanese cedar compared with the commercial cellulases. The JN11 saccharification of cellulosic biomasses, including hemicellulose (NaOH-pretreated biomasses), resulted in high glucose and xylose yields because of the high xylanase/xylosidase activity of JN11. Moreover, even JN11 saccharification of hemicellulose-free biomasses (sulfuric acid-, hydrothermally, and steam exploded-pretreated biomasses) resulted in high glucose yields. The cellulase activity of JN11, however, was comparable to that of its commercial counterparts. These findings indicate that the saccharification ability of cellulase is unrelated to its cellulase activity when measured against Avicel, CMC, pNP-lactoside, and other substrates. JN11 showed high activity for all types of pretreated cellulosic biomasses, indicating its usefulness for saccharification of various cellulosic biomasses.
- Published
- 2012
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41. XlnR-independent signaling pathway regulates both cellulase and xylanase genes in response to cellobiose in Aspergillus aculeatus.
- Author
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Tani S, Kanamasa S, Sumitani J, Arai M, and Kawaguchi T
- Subjects
- Base Sequence, Cellobiose metabolism, Cellulase metabolism, Cloning, Molecular, Molecular Sequence Data, Sequence Alignment, Aspergillus metabolism, Cellobiose genetics, Cellulase genetics, Signal Transduction
- Abstract
The expression levels of the cellulase and xylanase genes between the host strain and an xlnR disruptant were compared by quantitative RT-PCR (qPCR) to identify the genes controlled by XlnR-independent signaling pathway. The cellulose induction of the FI-carboxymethyl cellulase (cmc1) and FIb-xylanase (xynIb) genes was controlled by XlnR; in contrast, the cellulose induction of the FIII-avicelase (cbhI), FII-carboxymethyl cellulase (cmc2), and FIa-xylanase (xynIa) genes was controlled by an XlnR-independent signaling pathway. To gain deeper insight into the XlnR-independent signaling pathway, the expression profile of cbhI was analyzed as a representative target gene. Cellobiose together with 1-deoxynojirimycin (DNJ), a glucosidase inhibitor, induced cbhI the most efficiently among disaccharides composed of β-glucosidic bonds. Furthermore, cellobiose with DNJ induced the transcription of cmc2 and xynIa, whereas cmc1 and xynIb were not induced. GUS reporter fusion analyses of truncated and mutated cbhI promoters revealed that three regions were necessary for effective cellulose-induced transcription, all of which contained the conserved sequence 5'-CCGN(2)CCN(7)G(C/A)-3' within the CeRE, which has been identified as the upstream activating element essential for expression of eglA in A. nidulans (Endo et al. 2008). The data therefore delineate a pathway in which A. aculeatus perceives the presence of cellobiose, thereby activating a signaling pathway that drives cellulase and hemicellulase gene expression under the control of the XlnR-independent regulation through CeRE.
- Published
- 2012
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42. Halophilic characterization of starch-binding domain from Kocuria varians α-amylase.
- Author
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Yamaguchi R, Inoue Y, Tokunaga H, Ishibashi M, Arakawa T, Sumitani J, Kawaguchi T, and Tokunaga M
- Subjects
- Bacillus metabolism, Circular Dichroism, Hot Temperature, Kinetics, Protein Conformation, Protein Denaturation, Protein Folding, Protein Structure, Tertiary, Recombinant Fusion Proteins chemistry, Salts chemistry, Sodium Chloride chemistry, Solubility, Starch chemistry, Static Electricity, Surface Properties, Temperature, Micrococcus enzymology, alpha-Amylases chemistry
- Abstract
The tandem starch-binding domains (KvSBD) located at carboxy-terminal region of halophilic α-amylase from moderate halophile, Kocuria varians, were expressed in E. coli with amino-terminal hexa-His-tag and purified to homogeneity. The recombinant KvSBD showed binding activity to raw starch granules at low to high salt concentrations. The binding activity of KvSBD to starch was fully reversible after heat-treatment at 85°C. Circular dichroism and thermal scanning experiments indicated that KvSBD showed fully reversible refolding upon cooling after complete melting at 70°C in the presence of 0.2-2.0M NaCl. The refolding rate was enhanced with higher salt concentration., (Copyright © 2011 Elsevier B.V. All rights reserved.)
- Published
- 2012
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43. Construction of a recombinant Trichoderma reesei strain expressing Aspergillus aculeatus β-glucosidase 1 for efficient biomass conversion.
- Author
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Nakazawa H, Kawai T, Ida N, Shida Y, Kobayashi Y, Okada H, Tani S, Sumitani J, Kawaguchi T, Morikawa Y, and Ogasawara W
- Subjects
- Aspergillus genetics, Biomass, Culture Media chemistry, Fermentation, Gene Expression, Genetic Engineering, Promoter Regions, Genetic, Recombinant Proteins genetics, Recombinant Proteins metabolism, Trichoderma genetics, Xylans metabolism, Xylosidases metabolism, beta-Glucosidase genetics, Aspergillus enzymology, Cellulose metabolism, Metabolic Engineering, Trichoderma metabolism, beta-Glucosidase metabolism
- Abstract
To develop a Trichoderma reesei strain appropriate for the saccharification of pretreated cellulosic biomass, a recombinant T. reesei strain, X3AB1, was constructed that expressed an Aspergillus aculeatus β-glucosidase 1 with high specific activity under the control of the xyn3 promoter. The culture supernatant from T. reesei X3AB1 grown on 1% Avicel as a carbon source had 63- and 25-fold higher β-glucosidase activity against cellobiose compared to that of the parent strain PC-3-7 and that of the T. reesei recombinant strain expressing an endogenous β-glucosidase I, respectively. Further, the xylanase activity was 30% lower than that of PC-3-7 due to the absence of xyn3. X3AB1 grown on 1% Avicel-0.5% xylan medium produced 2.3- and 3.3-fold more xylanase and β-xylosidase, respectively, than X3AB1 grown on 1% Avicel. The supernatant from X3AB1 grown on Avicel and xylan saccharified NaOH-pretreated rice straw efficiently at a low enzyme dose, indicating that the strain has good potential for use in cellulosic biomass conversion processes., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2012
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44. Agrobacterium tumefaciens-mediated transformation of Aspergillus aculeatus for insertional mutagenesis.
- Author
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Kunitake E, Tani S, Sumitani J, and Kawaguchi T
- Abstract
Agrobacterium tumefaciens-mediated transformation (AMT) was applied to Aspergillus aculeatus. Transformants carrying the T-DNA from a binary vector pBIG2RHPH2 were sufficiently mitotically stable to allow functional genomic analyses. The AMT technique was optimized by altering the concentration of acetosyringone, the ratio and concentration of A. tumefaciens and A. aculeatus cells, the duration of co-cultivation, and the status of A. aculeatus cells when using conidia, protoplasts, or germlings. On average, 30 transformants per 104 conidia or 217 transformants per 107 conidia were obtained under the optimized conditions when A. tumefaciens co-cultured with fungi using solid or liquid induction media (IM). Although the transformation frequency in liquid IM was 100-fold lower than that on solid IM, the AMT method using liquid IM is better suited for high-throughput insertional mutagenesis because the transformants can be isolated on fewer selection media plates by concentrating the transformed germlings. The production of two albino A. aculeatus mutants by AMT confirmed that the inserted T-DNA disrupted the polyketide synthase gene AapksP, which is involved in pigment production. Considering the efficiency of AMT and the correlation between the phenotypes and genotypes of the transformants, the established AMT technique offers a highly efficient means for characterizing the gene function in A. aculeatus.
- Published
- 2011
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45. Development of a homologous transformation system for Aspergillus aculeatus based on the sC gene encoding ATP-sulfurylase.
- Author
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Adachi H, Tani S, Kanamasa S, Sumitani J, and Kawaguchi T
- Subjects
- Genome, Mutation, Aspergillus genetics, Genetic Engineering methods, Sulfate Adenylyltransferase genetics, Transformation, Genetic
- Abstract
A homologous transformation system was developed using the endogenous ATP-sulfurylase gene, AasC, as a selectable marker in Aspergillus aculeatus. Spontaneous mutation was proved to be beneficial in isolating AasC-deficient mutants. Molecular analysis of sC(+) transformants revealed that the frequency of single copy integration at ATP-sulfurylase locus was more than 40%.
- Published
- 2009
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46. Improvement of Aspergillus oryzae for hyperproduction of endoglucanase: expression cloning of cmc-1 gene of Aspergillus aculeatus.
- Author
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Rashid MH, Javed MR, Kawaguchi T, Sumitani J, and Arai M
- Subjects
- Aspergillus enzymology, Aspergillus oryzae enzymology, Aspergillus oryzae metabolism, Cellulase genetics, Cellulase metabolism, Gene Expression Regulation, Fungal, Industrial Microbiology, Transformation, Genetic, Aspergillus genetics, Aspergillus oryzae genetics, Cellulase biosynthesis, Cloning, Molecular
- Abstract
FI-Carboxymethylcellulase (cmc1; family 12) is one of the endoglucanases of Aspergillus aculeatus and consists of single polypeptide chain of 221 amino acids. The cmc1 gene was expressed in Aspergillus oryzae niaD300 (niaD-) under promoter 8142. The plasmid pCMG14 carrying the cmc1 gene at PstI site was used as a source of the gene (920 bp) and Aspergillus oryzae was successfully transformed by the plasmid pNAN-cmc1 (harboring cmc1 gene). The plasmid was integrated in Aspergillus oryzae niaD300 genome at niaD locus and the transformed fungus constitutively produced very high amounts of endoglucanases when grown on glucose, maltose, soluble starch and wheat bran.
- Published
- 2008
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47. Development of an efficient production method for beta-mannosidase by the creation of an overexpression system in Aspergillus aculeatus.
- Author
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Kanamasa S, Kawaguchi T, Takada G, Kajiwara S, Sumitani J, and Arai M
- Subjects
- Aspergillus classification, Aspergillus growth & development, Fungal Proteins genetics, Fungal Proteins metabolism, Plasmids genetics, Promoter Regions, Genetic, Recombinant Proteins genetics, Transformation, Genetic, beta-Mannosidase genetics, Aspergillus enzymology, Aspergillus genetics, Biotechnology methods, Recombinant Proteins metabolism, Up-Regulation, beta-Mannosidase biosynthesis
- Abstract
Aim: To develop an overexpression system in Aspergillus aculeatus in order to establish an efficient overproduction method of beta-mannosidase (MANB)., Methods and Results: An overexpression plasmid for the manB gene, encoding A. aculeatus MANB, was constructed and introduced into A. aculeatus cells. The gene was overexpressed under an improved promoter containing 12 copies of Region III cis-elements of Aspergillus oryzae in the transformant, and it secreted 2.56 mg MANB ml(-1) in liquid culture, which obtained a 9.4-fold higher productivity than that achieved in an overexpression system in A. oryzae. Most of the secreted protein in the cultured medium of the transformed A. aculeatus was the overproduced enzyme., Conclusions: Aspergillus aculeatus with the introduced overexpression plasmid produced 2.56 mg MANB ml(-1) in cultured medium. The improved promoter with A. oryzae Region III functioned in A. aculeatus; thus the strain is an expectant host for recombinant protein productions., Significance and Impact of the Study: The overexpression system with the improved promoter in A. aculeatus brought the highest productivity of MANB reported to date. The expression system would be a strong bioindustrial tool for protein production.
- Published
- 2007
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48. Alteration of substrate specificity of fructosyl-amino acid oxidase from Fusarium oxysporum.
- Author
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Fujiwara M, Sumitani J, Koga S, Yoshioka I, Kouzuma T, Imamura S, Kawaguchi T, and Arai M
- Subjects
- Amino Acid Oxidoreductases isolation & purification, Amino Acid Sequence, Amino Acid Substitution, Kinetics, Lysine analogs & derivatives, Lysine metabolism, Molecular Sequence Data, Mutagenesis, Mutation, Missense, Valine analogs & derivatives, Valine metabolism, Amino Acid Oxidoreductases genetics, Amino Acid Oxidoreductases metabolism, Fusarium enzymology, Substrate Specificity genetics
- Abstract
Fructosyl-amino acid oxidase (FOD-F) from Fusarium oxysporum f. sp. raphani (NBRC 9972) is the enzyme catalyzing the oxidative deglycation of fructosyl-amino acids such as N(epsilon)-fructosyl N(alpha)-benzyloxycarbonyl-lysine (FZK) and fructosyl valine (FV), which are model compounds of the glycated proteins in blood. Wild-type FOD-F has high activities toward both substrates. We obtained a mutant FOD-F, which reacts with FZK but not with FV by random mutagenesis. One amino-acid substitution (K373R) occurred in the mutant FOD-F. In addition to K373R, K373W, K373M, K373T, and K373V, which were selected for optimization of the substitution at position K373, were purified and characterized. Kinetic analysis showed that the catalytic turnover for FV greatly decreased, whereas that for FZK did not. In consequence, the specificities toward FZK were increased in the mutant FOD-Fs. The relation between the substrate specificity of the mutant FOD-Fs and the position of the carboxyl group of the substrates was demonstrated using a series of the substrates having the carboxyl group at the different position. The mutant FOD-Fs are attractive candidates for developing an enzymatic measurement method for glycated proteins such as glycated albumin in serum. This study will be helpful to establish an easier and rapid clinical assay system of glycated albumin.
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- 2007
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49. Alteration of substrate specificity of fructosyl-amino acid oxidase from Ulocladium sp. JS-103.
- Author
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Fujiwara M, Sumitani J, Koga S, Yoshioka I, Kouzuma T, Imamura S, Kawaguchi T, and Arai M
- Subjects
- Amino Acid Oxidoreductases chemistry, Amino Acid Oxidoreductases metabolism, Ascomycota chemistry, Ascomycota enzymology, Biological Assay methods, Fungal Proteins chemistry, Fungal Proteins metabolism, Glycated Hemoglobin analysis, Humans, Substrate Specificity genetics, Valine analogs & derivatives, Valine chemistry, Valine metabolism, Amino Acid Oxidoreductases genetics, Amino Acid Substitution, Ascomycota genetics, Fungal Proteins genetics, Mutagenesis genetics, Mutation, Missense
- Abstract
We showed by random mutagenesis that one-amino-acid substitution at Arg94 in fructosyl-amino acid oxidase from Ulocladium sp. JS-103 enhanced substrate specificity toward fructosyl valine (FV), a model compound of hemoglobin A(1c). Kinetic analysis showed that the specificity of the R94W mutant enzyme toward FV was 14-fold that of the wild-type enzyme. The mutant enzyme obtained will be useful in developing an enzymatic measurement method for hemoglobin A(1c).
- Published
- 2006
- Full Text
- View/download PDF
50. Cloning and sequencing of an exoglucanase gene from Streptomyces sp. M 23, and its expression in Streptomyces lividans TK-24.
- Author
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Park CS, Kawaguchi T, Sumitani J, Takada G, Izumori K, and Arai M
- Subjects
- Amino Acid Sequence, Enzyme Activation, Glycoside Hydrolases analysis, Molecular Sequence Data, Molecular Weight, Protein Engineering methods, Recombinant Proteins analysis, Recombinant Proteins chemistry, Sequence Analysis, Protein, Cloning, Molecular, Glycoside Hydrolases chemistry, Glycoside Hydrolases genetics, Streptomyces enzymology, Streptomyces genetics
- Abstract
A gene encoding exoglucanase (CBHII) of Streptomyces sp. M 23 was cloned and sequenced. The cbhII gene consisted of 1359 bp capable of encoding a polypeptide of 453 amino acids with a calculated molecular mass of 45,175 Da. The deduced amino acid sequence showed homology with those of cellulases belonging to family 6 of the glycosyl hydrolases. The cbhII gene was subcloned into the plasmid pSEV1 and expressed in Streptomyces lividans TK-24. The transformed cells were able to secrete the enzyme efficiently in an active form. The CBHII expressed by S. lividans TK-24 was purified to homogeneity by SDS-polyacrylamide gel and characterized. The recombinant CBHII was stable up to 50 degrees C and more than 30% of the original activity remained after heating at 100 degrees C for 10 min. The amino-terminal amino acid sequence of the recombinant CBHII was identified as GPAAPTARVD. These results agreed well with the properties of the authentic CBHII.
- Published
- 2005
- Full Text
- View/download PDF
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