604 results on '"Suji S."'
Search Results
2. Dopamine-induced photoluminescence quenching of bovine serum albumin–capped manganese-doped zinc sulphide quantum dots
- Author
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Abha, K., Sumithra, I. S., Suji, S., Anjana, R. R., Anjali Devi, J. S., Nebu, John, Lekha, G. M., Aparna, R. S., and George, Sony
- Published
- 2020
- Full Text
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3. Evaluation of DNA methylation and mRNA expression of heat shock proteins in thermal manipulated chicken
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Vinoth, A., Thirunalasundari, T., Shanmugam, M., Uthrakumar, A., Suji, S., and Rajkumar, U.
- Published
- 2018
4. Evaluation of Neutralization Potential of Naja naja and Daboia russelii Snake Venom by Root Extract of Cyanthillium cinereum.
- Author
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Suji S., Dinesh M. D., Keerthi K. U., Anagha K. P., Arya J., and Anju K. V.
- Subjects
- *
PHYTOTHERAPY , *SNAKE venom , *IN vitro studies , *MEDICINAL plants , *HEMOLYSIS & hemolysins , *ELECTROPHORESIS , *ORGANIC compounds , *PROTEOLYTIC enzymes , *PHYTOCHEMICALS , *GAS chromatography , *QUALITATIVE research , *ANTIVENINS , *MASS spectrometry , *PLANT extracts - Abstract
Aim: One of the main reasons for the death due to snake bites is the non-availability of antivenoms in the regions where they are needed. The use of medicinal plants and plant-based natural products as an alternative to antivenom will become a milestone in snake bite envenomation. The present study investigates the in vitro antivenom properties of Cyanthillium cinereum root extracts. Materials and methods: The C. cinereum root's aqueous extract was prepared by the Soxhlet extraction method, and phytochemical screening was performed to detect the presence of various bioactive compounds. Thin-layer chromatography (TLC) and gas chromatography--mass spectrometry (GC--MS) analysis were performed for the detection and identification of phytochemical constituents. In this study, an in vitro model is used to assess the antivenom capability of aqueous extract. Venom toxicity and neutralization assays were as follows: An in vitro pharmacological evaluation was performed by direct hemolysis assay, indirect hemolytic assay, proteolytic activity, neutralization of procoagulant activity, and gelatin liquefaction method. Results: Qualitative analysis of phytochemicals by the standard method showed the presence of various phytochemical constituents. Also, GC--MS analysis showed the presence of three major compounds that possess antivenom activity from the obtained 60 bioactive compounds, and their chemical structures were also determined. Venom protein profiling was performed by sodium dodecyl sulfate--polyacrylamide gel electrophoresis (SDS--PAGE) analysis. The plant extract was able to neutralize the Naja naja (N. naja) and Daboia russelii (D. russelii) venom induced hemolysis and it was reduced below 50 and 40%, respectively and the extract was also able to reduce the hemolytic halo produced by venoms. Procoagulant activity and gelatin liquefaction assay showed that venom-induced clotting was neutralized by increasing the root extract concentration sufficiently. Conclusion: The aqueous extract of the root of C. cinereum showed potent in vitro venom-neutralizing activity, and it can be used as a formidable therapeutic agent against N. naja and D. russelii envenomation. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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5. Enhanced Agroproductivity by Phosphate Solubilising Bacteria
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Yaashikaa, PR, Tamilselvi, S, Suji, S, and Murugesan, GS
- Published
- 2016
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6. SCREENING OF ANTIBACTERIAL ACTIVITY IN EDIBLE MUSHROOM PLEUROTUS EOUS (BERK.) SACC. USING DIFFERENT SOLVENT EXTRACTS
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Suji S, Irene Wilsy J, Reginald Appavoo M, and Jasmin Jansi J
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Plant Science - Published
- 2022
7. In vitro anticariogenic activity of aqueous extract of Psidium guajava leaf against Streptococcus oralis – A dormant pathogen for dental caries.
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Keerthi, K, Dinesh, M, Suji, S, Anagha, K, Anju, K, and Vismaya, R
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DENTAL caries ,GUAVA ,PLANT extracts ,STREPTOCOCCUS ,PATHOGENIC microorganisms - Abstract
Background: Dental caries is a complicated, multifaceted illness that affects teeth and leads to serious cavities both inside and outside the teeth. Aim: This study aims to determine the efficacy of Psidium guajava leaf extract against Streptococcus oralis. Materials and Methods: P. guajava leaves were extracted in water using the Soxhlet technique, and to identify the existence of several beneficial substances, phytochemical screening was carried out. The inhibitory properties of the aqueous extract were tested against S. oralis. Antimicrobial activity was determined by the agar well diffusion method. The minimum inhibitory concentration (MIC) was determined by the liquid dilution method, and the minimum bactericidal concentration (MBC) was determined by the agar plate method. Results: Qualitative analysis of phytochemicals by standard methods showed the presence of various bioactive compounds. Using the well diffusion method, it has been determined that P. guajava leaf extract has antibacterial activity against S. oralis. The determination of the MIC and MBC showed that the extract exhibited an antimicrobial effect against cariogenic bacteria. Conclusion: P. guajava leaf extract contains bioactive compounds that have a significant impact on the avoidance of dental cariogens. P. guajava leaf extract is effective against S. oralis. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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8. In vitro anticariogenic activity of aqueous extract of Psidium guajava leaf against Streptococcus oralis – A dormant pathogen for dental caries
- Author
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Dinesh, MD, primary, Keerthi, KU, additional, Suji, S, additional, Anagha, KP, additional, Anju, KV, additional, and Vismaya, R, additional
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- 2023
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9. Prediction of Communication Effectiveness Using Naïve Bayes Algorithm
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Suji S, Abisha D, Swetha S, and Vaishnupriya S
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2023
10. An Intelligent Authentication System for Improved Security
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M. Hemalatha, J. Shalini Priya, Jeyashri. R, Preethi. S, T. Porselvi, and Suji. S
- Published
- 2022
11. Monthly flow forecast for Mississippi River basin using artificial neural networks
- Author
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Sivapragasam, C., Vanitha, S., Muttil, Nitin, Suganya, K., Suji, S., Thamarai Selvi, M., Selvi, R., and Jeya Sudha, S.
- Published
- 2014
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12. Synthesis of β-cyclodextrin functionalized gold nanoparticles for the selective detection of Pb2+ ions from aqueous solution
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Aswathy, B., Avadhani, G. S., Suji, S., and Sony, G.
- Published
- 2012
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13. Optimization studies on aqueous two-phase extraction of hexavalent chromium from contaminated aqueous solutions
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Suji, S K, primary, Sinju, M, additional, and Radhakrishnan, K B, additional
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- 2021
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14. Aqueous two-phase extraction of lead from contaminated aqueous solutions
- Author
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Suji, S K, primary and Radhakrishnan, K B, additional
- Published
- 2021
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15. Design of Reconfigurable Block FIR Filter Architecture and Implementation on Hardware
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Radhika P and Suji S
- Subjects
Environmental Engineering ,Finite impulse response ,Hardware and Architecture ,Computer science ,business.industry ,General Chemical Engineering ,Block (telecommunications) ,General Engineering ,Computer Science (miscellaneous) ,Architecture ,business ,Computer hardware ,Biotechnology - Abstract
In this paper, a reconfigurable block FIR filter which supports variable filter length is proposed. This recon-figurable block FIR filter uses block based design. Hence, this is an algorithm free architecture. This proposed filter can be used for 5G air interface.The proposed filter produces more efficient power reduction than that of the other filter.The number of LUTs and registers are also reduced in the reconfigurable block FIR filter. The designed filter has been implemented in the ZYNQ xc7020 hardware device using the vivado 2015.4.The technique used for hardware implementation is the IP creation and debug-ging.The debugging helps in the monitoring and triggering the hardware device.
- Published
- 2018
16. T-homoeolog specific plasma membrane protein 3 [ Nt(t)PMP3-2 ] in polyploid Nicotiana tabacum shows conserved alternative splicing, derived from extant Nicotiana tomentosiformis parent
- Author
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Kumari, Kumkum, primary, Jegadeeson, Vidya, additional, Suji, S., additional, Venkataraman, Gayatri, additional, and Parida, Ajay, additional
- Published
- 2017
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17. Evaluation of DNA methylation and mRNA expression of heat shock proteins in thermal manipulated chicken
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Vinoth, A., primary, Thirunalasundari, T., additional, Shanmugam, M., additional, Uthrakumar, A., additional, Suji, S., additional, and Rajkumar, U., additional
- Published
- 2017
- Full Text
- View/download PDF
18. Enhanced Agroproductivity by Phosphate Solubilising Bacteria
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Suji S, P.R. Yaashikaa, Murugesan Gs, and S. Tamilselvi
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biology ,Hyacinth ,Biofertilizer ,Microorganism ,Plant Science ,Phosphate ,biology.organism_classification ,Toxicology ,chemistry.chemical_compound ,chemistry ,Phosphorite ,Wastewater ,Bacillus coagulans ,Food science ,Bacteria - Abstract
Enhanced Agroproductivity by Phosphate Solubilising Bacteria The demand in agricultural field can be fulfilled by providing supplements in the form of biofertilizers and biopesticides. Biofertilizers are a consortium of microorganisms that helps for the growth of plants by providing necessary nutrients either by fixing atmospheric nitrogen or by solubilising the phosphorous present in the soil. In this present study, Bacillus coagulans acts as phosphate solubiliser in degrading rock phosphate by providing suitable carrier material. Bacillus coagulans was grown in Nutrient Medium and bioprocess conditions for maximum growth of the organism was optimized. It was found that Bacillus coagulans showed maximum cell concentration at pH 7.5, temperature 37°C and incubation period of 24 hrs. The culture is then mixed with suitable powder and liquid carriers. Powder carrier such as water hyacinth and groundnut shell are mixed with bio inoculum. Liquid carriers such as herbal mixture solution, archaea bacterial solution and treated waste water are mixed with culture at equal proportion. Life span of the organism along with the carrier material was scrutinized for a period of 120 days. The field response of the formulated biofertilizer was checked by applying on shallots. Among the powder carriers, water hyacinth showed highest cell count of 74×109 cfu/ml. Comparitively, among the liquid carriers archaea bacterial solution showed highest cell count of 77×109 cfu/ml. In order to determine the efficiency, morphological characters of the shallots were examined..
- Published
- 2016
19. Effectiveness of Hot Foot Bath Versus Exercises on Reducing Pain among Patients with Osteoarthritis
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Ezheltha, Suji S D, primary and Sharmila, Jansi Rani S S, additional
- Published
- 2015
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20. Microwave assisted one pot synthesis of biocompatible gold nanoparticles in Triton X-100 aqueous micellar medium using tryptophan as reducing agent
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Aswathy, B., Suji, S., Avadhani, G.S., Aswathy, R., Suganthi, S., and Sony, G.
- Published
- 2011
- Full Text
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21. Microwave assisted synthesis and UV–Vis spectroscopic studies of silver nanoparticles synthesized using vanillin as a reducing agent
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Aswathy, B., Avadhani, G.S., Sumithra, I.S., Suji, S., and Sony, G.
- Published
- 2011
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22. Effectiveness of Hot Foot Bath Versus Exercises on Reducing Pain among Patients with Osteoarthritis
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Suji S D Ezheltha and Jansi Rani S S Sharmila
- Subjects
General Nursing - Published
- 2015
23. Experimental study on the utilization of industrial and agricultural wastes to stabilize the expansive soil subgrades
- Author
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Rajakumar, C., primary, Yuvaraj, S., additional, Meenambal, T., additional, and Suji, S., additional
- Published
- 2014
- Full Text
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24. Monthly flow forecast for Mississippi River basin using artificial neural networks
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Sivapragasam, C., primary, Vanitha, S., additional, Muttil, Nitin, additional, Suganya, K., additional, Suji, S., additional, Thamarai Selvi, M., additional, Selvi, R., additional, and Jeya Sudha, S., additional
- Published
- 2013
- Full Text
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25. Effectiveness of Hot Foot Bath Versus Exercises on Reducing Pain among Patients with Osteoarthritis.
- Author
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D, Ezheltha Suji S and S, Sharmila Jansi Rani S
- Subjects
THERMOTHERAPY ,PAIN management ,KNEE pain ,AGE distribution ,ANKLE ,EXERCISE ,FOOT ,HYDROTHERAPY ,RESEARCH methodology ,OSTEOARTHRITIS ,COMORBIDITY ,JUDGMENT sampling ,BODY movement ,VISUAL analog scale ,TREATMENT effectiveness ,PRE-tests & post-tests ,FAMILY history (Medicine) ,DESCRIPTIVE statistics ,INFERENTIAL statistics ,EVALUATION ,THERAPEUTICS - Abstract
Osteoarthritis is a global degenerative joint disease involving the cartilage and many of its surrounding tissues. In arthritis severe joint pain was reported by, at least one in seven adults with arthritis in every state. The aim of present study was to assess the effectiveness of hot foot bath versus exercises on reducing pain among patients with osteoarthritis in selected hospitals at Kanyakumari district. A quasi experimental with pre test post test with control group design was used for the study. A sample of 60 osteoarthritis patients with knee and ankle joint pain in Issac Bone & Joint Specialty hospital, Marthandam was selected by purposive sampling technique. Data were collected using a demographic and clinical variables and visual analogue pain scale from group I and group II before and after administration of hot foot bath and exercises on the first day, third day and fifth day of the treatment. The investigator prepared a information booklet andwas given to the samples on the fifth day. Analysis was done using both descriptive and inferential statistics. Results show that hot foot bath (0.52) had better effect in reduction of joint pain in the knees and ankles than exercises (1.20). There was a significant association between pretest level of pain among patients with age, duration of illness, family history of osteoarthritis, physical mobility and any associated condition present with osteoarthritis. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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26. Synthesis of β-cyclodextrin functionalized gold nanoparticles for the selective detection of Pb2+ ions from aqueous solution
- Author
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Aswathy, B., Avadhani, G., Suji, S., and Sony, G.
- Abstract
Abstract: In the present study we carried out the synthesis of β-cyclodextrin (β-CD) functionalized gold nanoparticles (AuNPs) using a microwave assisted heating method in alkaline media. Stable dispersion of β-CD stabilized AuNPs was obtained at an optimized pH of 10.5. At this pH value the deprotonated secondary hydroxyl group of β-CD shows the highest chelating affinity toward Pb
2+ ions thereby inducing AuNP aggregation. The Pb2+ induced aggregation in β-CD-AuNP solution is monitored by both colorimetric response and UV-Vis spectroscopy. TEM, DLS and FTIR analyses were carried out to confirm the Pb2+ ion induced aggregation behaviour of β-CD-AuNPs under alkaline conditions. Furthermore at the experimental pH the response of the β-CD-AuNP system towards Pb2+ ions is selective when compared with other interfering metal cations.- Published
- 2012
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27. Comparison of intravenous versus perineural dexamethasone as a local anaesthetic adjunct for peripheral nerve blocks in the lower limb: A meta-analysis and systematic review.
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Desai N, Pararajasingham S, Onwochei D, and Albrecht E
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- Humans, Randomized Controlled Trials as Topic, Peripheral Nerves drug effects, Dexamethasone administration & dosage, Nerve Block methods, Lower Extremity surgery, Anesthetics, Local administration & dosage, Administration, Intravenous
- Abstract
Background: As a local anaesthetic adjunct, the systemic absorption of perineural dexamethasone in the lower limb could be restricted because of decreased vascularity when compared with the upper limb., Objectives: To compare the pharmacodynamic characteristics of intravenous and perineural dexamethasone in the lower limb., Design: Systematic review of randomised controlled trials with meta-analysis., Data Sources: Systematic search of Central, Google Scholar, Ovid Embase and Ovid Medline to 18 July 2023., Eligibility Criteria: Randomised controlled trials, which compared the intravenous with perineural administration of dexamethasone as a local anaesthetic adjunct in peripheral nerve blocks for surgery of the lower limb., Results: The most common peripheral nerve blocks were femoral, sciatic and ankle block. The local anaesthetic was long acting in all trials and the dose of dexamethasone was 8 mg in most trials. The primary outcome, the duration of analgesia, was investigated by all nine trials ( n = 546 patients). Overall, compared with intravenous dexamethasone, perineural dexamethasone increased the duration of analgesia from 19.54 to 22.27 h, a mean difference [95% confidence interval (CI) of 2.73 (1.07 to 4.38) h; P = 0.001, I2 = 87]. The quality of evidence was moderate owing to serious inconsistency. However, analysis based on the location of the peripheral nerve block, the type of local anaesthetic or the use of perineural adrenaline showed no difference in duration between intravenous and perineural dexamethasone. No differences were shown for any of the secondary outcomes related to efficacy and side effects., Conclusion: In summary, moderate evidence supports the superiority of perineural dexamethasone over intravenous dexamethasone in prolonging the duration of analgesia. However, this difference is unlikely to be clinically relevant. Consideration of the perineural use of dexamethasone should recognise that this route of administration remains off label., (Copyright © 2024 The Author(s). Published by Wolters Kluwer Health, Inc. on behalf of the European Society of Anaesthesiology.)
- Published
- 2024
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28. Progress towards permanent respiratory support.
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Shin S, Nasim U, O'Connor H, and Hong Y
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- Humans, Equipment Design, Lung Diseases therapy, Animals, Treatment Outcome, Blood Coagulation drug effects, Coated Materials, Biocompatible, Thrombosis prevention & control, Thrombosis etiology, Lung Transplantation, Anticoagulants therapeutic use, Extracorporeal Membrane Oxygenation instrumentation, Extracorporeal Membrane Oxygenation adverse effects
- Abstract
Purpose of Review: Although lung transplantation stands as the gold standard curative therapy option for end-stage lung disease, the scarcity of available organs poses a significant challenge in meeting the escalating demand. This review provides an overview of recent advancements in ambulatory respiratory assist systems, selective anticoagulation therapies that target the intrinsic pathway, and innovative surface coatings to enable permanent respiratory support as a viable alternative to lung transplantation., Recent Findings: Several emerging ambulatory respiratory assist systems have shown promise in both preclinical and clinical trials. These systems aim to create more biocompatible, compact, and portable forms of extracorporeal membrane oxygenation that can provide long-term respiratory support. Additionally, innovative selective anticoagulation strategies, currently in various stages of preclinical or clinical development, present a promising alternative to currently utilized nonselective anticoagulants. Moreover, novel surface coatings hold the potential to locally prevent artificial surface-induced thrombosis and minimize bleeding risks., Summary: This review of recent advancements toward permanent respiratory support summarizes the development of ambulatory respiratory assist systems, selective anticoagulation therapies, and novel surface coatings. The integration of these evolving device technologies with targeted anticoagulation strategies may allow a safe and effective mode of permanent respiratory support for patients with chronic lung disease., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
- Published
- 2024
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29. Microbe-binding Antibodies in the Female Genital Tract: Associations with the Vaginal Microbiome and Genital Immunology.
- Author
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Liu R, Pollock J, Huibner S, Udayakumar S, Irungu E, Ngurukiri P, Muthoga P, Adhiambo W, Kimani J, Beattie T, Coburn B, and Kaul R
- Abstract
Bacteria-Ig interactions maintain homeostasis in the gut through the clearance of pathogenic bacteria and the development of immune tolerance to inflammatory bacteria; whether similar interactions modulate inflammation and bacterial colonization in the female genital tract is uncertain. In this study, we used a flow cytometry-based assay to quantify microbe-binding IgA and IgG in the cervicovaginal secretions of 200 HIV-uninfected women from Nairobi, Kenya that were enriched for bacterial vaginosis. Total IgA and IgG were abundant and frequently demonstrated ex vivo binding to the key vaginal bacteria species Gardnerella vaginalis, Prevotella bivia, Lactobacillus iners, and Lactobacillus crispatus, which are largely microbe-specific. Microbe-binding Abs were generally not associated with the presence or abundance of their corresponding bacteria. Total and microbe-binding IgA and IgG were inversely correlated with total bacterial abundance and positively correlated with several proinflammatory cytokines (IL-6, TNF) and chemotactic chemokines (IP-10, MIG, MIP-1α, MIP-1β, MIP-3α, MCP-1, IL-8), independent of total bacterial abundance. Flow cytometry-based quantification of microbe-binding Abs provides a platform to investigate host-microbiota interactions in the female genital tract of human observational and interventional studies. In contrast to the gut, cervicovaginal microbe-binding IgA and IgG do not appear to be immunoregulatory but may indirectly mitigate bacteria-induced inflammation by reducing total bacterial abundance., (Copyright © 2024 by The American Association of Immunologists, Inc.)
- Published
- 2024
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30. Exploring the progression of drug dependence in a methamphetamine self-administration rat model through targeted and non-targeted metabolomics analyses.
- Author
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Song SH, Kim S, Jang WJ, Ryu IS, Jeong CH, and Lee S
- Subjects
- Animals, Rats, Male, Disease Progression, Substance-Related Disorders metabolism, Rats, Sprague-Dawley, Metabolic Networks and Pathways drug effects, Central Nervous System Stimulants administration & dosage, Central Nervous System Stimulants adverse effects, Metabolome drug effects, Glycerophospholipids metabolism, Extinction, Psychological drug effects, Arginine administration & dosage, Arginine metabolism, Methamphetamine administration & dosage, Methamphetamine adverse effects, Metabolomics methods, Self Administration, Disease Models, Animal
- Abstract
Persistent neurochemical and biological disturbances resulting from repeated cycles of drug reward, withdrawal, and relapse contribute to drug dependence. Methamphetamine (MA) is a psychostimulant with substantial abuse potential and neurotoxic effects, primarily affecting monoamine neurotransmitter systems in the brain. In this study, we aimed to explore the progression of drug dependence in rat models of MA self-administration, extinction, and reinstatement through targeted and non-targeted metabolomics analyses. Metabolic profiles were examined in rat plasma during the following phases: after 16 days of MA self-administration (Group M); after 16 days of self-administration followed by 14 days of extinction (Group MS); and after self-administration and extinction followed by a reinstatement injection of MA (Group MSM). Each group of MA self-administration, extinction, and reinstatement induces distinct changes in the metabolic pathways, particularly those related to the TCA cycle, arginine and proline metabolism, and arginine biosynthesis. Additionally, the downregulation of glycerophospholipids and sphingomyelins in Group MSM suggests their potential role in MA reinstatement. These alterations may signify the progressive deterioration of these metabolic pathways, possibly contributing to drug dependence following repeated cycles of drug reward, withdrawal, and relapse. These results provide valuable insights into the metabolic changes associated with MA use at various stages, potentially facilitating the discovery of early diagnostic biomarkers and therapeutic targets for MA use disorders., (© 2024. The Author(s).)
- Published
- 2024
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31. Lidocaine combined with general anesthetics impedes metastasis of breast cancer cells via inhibition of TGF-β/Smad-mediated EMT signaling by reprogramming tumor-associated macrophages.
- Author
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Seok Han B, Ko S, Seok Park M, Ji Lee Y, Eun Kim S, Lee P, Jin Cho Y, Gyeol Ko H, Kwak S, Park E, Lim A, Lee S, Yoo S, Kim H, Hee Jung K, and Hong SS
- Abstract
Surgical resection is the best-known approach for breast cancer treatment. However, post-operative metastases increase the rate of death. The potential effect of anesthetic drugs on long-term tumor growth, risk of metastasis, and recurrence after surgery has been investigated in cancer patients. However, the underlying mechanisms remain unclear. Therefore, we aimed to elucidate the anti-metastatic effect of lidocaine combined with common anesthetics and its mechanisms of action on lung metastasis in breast cancer models. The combination of lidocaine with propofol or sevoflurane inhibited the growth of TNBC cells compared to treatment alone. In addition, the combination effectively inhibited cancer cell migration and invasion. It suppressed tumor growth and increased the survival rate in breast 4 T1 orthotopic models. More importantly, it inhibited lung metastasis and recurrence compared with groups treated with a single anesthetic. In co-culture with TAMs and TNBC cells, lidocaine not only reduced M2-tumor-associated macrophages (TAM) that were increased by sevoflurane or propofol but also increased M1 macrophage polarization, impeding tumor growth in TNBC. Also, we found that the transforming growth factor-β (TGF-β) derived from TAMs increased EMT signaling in TNBC cells, and that lidocaine affected cancer cells as well as M2-TAMs, inducing M2 to M1 reprogramming and decreasing TGF-β/Smads-mediated EMT signaling in TNBC cells, leading to inhibition of cancer metastasis and recurrence. These findings suggest lidocaine combined with general anesthetics as a potential therapeutic approach for the inhibition of recurrence and metastasis of breast cancer patients undergoing curative resection., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier B.V.)
- Published
- 2024
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32. Analytical Validation of Esopredict, an Epigenetic Prognostic Assay for Patients with Barrett's Esophagus.
- Author
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Laun S, Pierre F, Kim S, Lunz D, Maddala T, Braun JV, Meltzer SJ, and Kann L
- Abstract
Esopredict
TM is a prognostic assay that risk-stratifies Barrett's esophagus patients to predict future progression to high-grade dysplasia (HGD) or esophageal adenocarcinoma (EAC). Established based on foundational studies at Johns Hopkins University, a risk algorithm was developed and clinically validated in two independent studies ( n = 320). EsopredictTM is currently offered as a clinical test under the Clinical Laboratory Improvement Amendments (CLIA) guidelines. Here we present the analytical validation by repeated testing of FFPE tissues ( n = 26 patients), cell lines, and contrived DNA controls to determine assay performance regarding analytical sensitivity (as defined by the limit of detection (LOD)), analytical specificity (as defined by the limit of blank (LOB)), accuracy as determined from the average positive and negative agreement, repeatability, and reproducibility. The LOD for the assay at 1.5% DNA methylation was significantly higher than the LOB, as determined by an unmethylated DNA control (0% methylated DNA). Inter- and intra-assay average positive agreement (APA) were 88% and 94%, respectively, while average negative agreement (ANA) values were 90% and 94%, respectively. Average inter- and intra-assay precision were <9% and <5% coefficient of variation (CV), respectively. These results confirm that EsopredictTM is a highly reproducible, sensitive, and specific risk categorization assay for the prediction of progression to HGD or EAC within 5 years.- Published
- 2024
- Full Text
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33. Impact of sleep disturbance in shift workers on hippocampal volume and psychomotor speed.
- Author
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Song Y, Kim S, Joo Y, Ha E, Shim Y, Lee H, Jeong H, Lyoo I, Yoon S, and Lee S
- Subjects
- Humans, Male, Female, Adult, Magnetic Resonance Imaging, Middle Aged, Sleep Disorders, Circadian Rhythm physiopathology, Sleep Quality, Processing Speed, Hippocampus pathology, Hippocampus physiopathology, Hippocampus diagnostic imaging, Psychomotor Performance physiology, Actigraphy
- Abstract
Study Objectives: Shift work interferes with circadian rhythms, affecting sleep quality and cognitive function. Poor sleep quality in shift worker (SW)s can impair psychomotor performance due to fatigue and sleepiness, increasing the risk of errors, accidents, and reduced productivity. Given the potential for atrophic changes in the hippocampus due to sleep disturbances, our study investigates how poor sleep quality correlates with hippocampal structural alterations and impacts psychomotor performance among SWs., Methods: We recruited 100 SWs, classifying them based on sleep quality into two groups: good sleep-SW group (n = 59) and poor sleep-SW group (n = 41). Sleep quality was assessed using both 7-day actigraphy for sleep efficiency and the Pittsburgh Sleep Quality Index. A control group of 106 non-SWs without sleep problems (non-SW group) was also included for comparison. The outcome measures were psychomotor speed and hippocampal volumes, both total and by subfield., Results: The poor sleep-SW group showed significantly smaller hippocampal volumes than both the good sleep-SW group (p < .001) and the non-SW group (p = .003). Longer shift work years correlated with greater reductions in hippocampal volume in this group (r = -0.42, p = .009), unlike in the good sleep-SW group (r = 0.08, p = .541). Furthermore, they demonstrated declines in psychomotor speed relative to the non-SW group (p = .006), which correlated with smaller hippocampal volumes (r = 0.37, p = .020)., Conclusions: SWs with poor sleep quality exhibit significant hippocampal volume reductions and psychomotor speed decline, underscoring the importance of early intervention and support for sleep issues in this population., (© The Author(s) 2024. Published by Oxford University Press on behalf of Sleep Research Society. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
- Published
- 2024
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34. Triple-function carbon-based Ca 2+ ion-selective pH ring microelectrode to study real-time bacteria-mediated hydroxyapatite corrosion.
- Author
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Sheet PS, Park S, Nguyen AT, George S, Maier C, and Koley D
- Subjects
- Hydrogen-Ion Concentration, Corrosion, Ion-Selective Electrodes, Streptococcus mutans metabolism, Durapatite chemistry, Calcium chemistry, Calcium metabolism, Carbon chemistry, Biofilms, Microelectrodes
- Abstract
Background: The local pH change mediated by the pathogenic bacterial species Streptococcus mutans plays a significant role in the corrosion of hydroxyapatite (HA) present in the tooth in the dynamic oral cavity. The acid produced by the bacteria decreases the local pH and releases Ca
2+ ions from the HA. We studied the bacteria-mediated demineralization of HA by scanning electrochemical microscopy (SECM) after growing S. mutans biofilm on HA for 7 days., Results: We notably developed a triple-function SECM-compatible tip that could be positioned above the biofilm. It can also measure the pH and [Ca2+ ] change simultaneously above the biofilm-HA substrate. The triple-function SECM tip is a combination of a potentiometric pH sensor deposited with iridium oxide and a dual-function carbon-based Ca2+ ion-selective membrane electrode with a slope of 67 mV/pH and 34.3 mV/log [Ca2+ ], respectively. The distance-controlled triple-function SECM tip monitored real-time pH and [Ca2+ ] changes 30 μm above the S. mutans biofilm. The high temporal resolution pH data demonstrated that after approximately 20 min of sucrose addition, S. mutans started to produce acid to titrate the solution buffer, causing a pH change from 7.2 to 6.5 for HA and from 7.2 to 5 for the glass substrate. We observed that, after 30 min of acid production, ∼300 μM of Ca2+ ions were increased at pH 6.5 above the biofilm surface as a result of the pH change in the local microenvironment. After the release of Ca2+ from HA, the pH environment again shifted toward the neutral side, from 6.5 to 7.2. Therefore, precipitation of Ca2+ happens at the top of the biofilm, thus corroding the HA from underneath. For a glass substrate, in contrast, no Ca2+ ions were released, and the pH did not change back to 7.2. We were able to observe the dynamics of the HA demineralization-remineralization process simultaneously with our newly developed triple-function SECM tip or microprobe., Significance: This technique could notably advance the study of similar complex processes, such as bacteria-mediated corrosion in biomedical and environmental contexts., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
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35. Atomic resolution scanning transmission electron microscopy at liquid helium temperatures for quantum materials.
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Mun J, Potemkin D, Jang H, Park S, Mick S, Petrovic C, Cheong SW, Han MG, and Zhu Y
- Abstract
Fundamental quantum phenomena in condensed matter, ranging from correlated electron systems to quantum information processors, manifest their emergent characteristics and behaviors predominantly at low temperatures. This necessitates the use of liquid helium (LHe) cooling for experimental observation. Atomic resolution scanning transmission electron microscopy combined with LHe cooling (cryo-STEM) provides a powerful characterization technique to probe local atomic structural modulations and their coupling with charge, spin and orbital degrees-of-freedom in quantum materials. However, achieving atomic resolution in cryo-STEM is exceptionally challenging, primarily due to sample drifts arising from temperature changes and noises associated with LHe bubbling, turbulent gas flow, etc. In this work, we demonstrate atomic resolution cryo-STEM imaging at LHe temperatures using a commercial side-entry LHe cooling holder. Firstly, we examine STEM imaging performance as a function of He gas flow rate, identifying two primary noise sources: He-gas pulsing and He-gas bubbling. Secondly, we propose two strategies to achieve low noise conditions for atomic resolution STEM imaging: either by temporarily suppressing He gas flow rate using the needle valve or by acquiring images during the natural warming process. Lastly, we show the applications of image acquisition methods and image processing techniques in investigating structural phase transitions in Cr
2 Ge2 Te6 , CuIr2 S4 , and CrCl3 . Our findings represent an advance in the field of atomic resolution electron microscopy imaging for quantum materials and devices at LHe temperatures, which can be applied to other commercial side-entry LHe cooling TEM holders., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Myung-Geun Han reports financial support was provided by Brookhaven National Laboratory. Stephen Mick reports a relationship with Gatan Inc that includes: employment. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
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36. Solution-processed NO 2 gas sensor based on poly(3-hexylthiophene)-doped PbS quantum dots operable at room temperature.
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Kwon J, Ha Y, Choi S, Jung DG, An HK, Kong SH, and Jung D
- Abstract
The global industrial development and increase in the number of transportation vehicles, such as automobiles and ships, have led to a steady increase in the issues related to greenhouse gas emissions. NO
2 is a greenhouse gas emitted in large quantities from automobiles and factories, and its emission is unavoidable in the modern world. Therefore, a sensor capable of precise detection of NO2 is required. The most commonly reported types of NO2 sensors are those based on metal oxides. However, their operation at room temperature is impossible owing to their high-temperature operating characteristics, and therefore, a heater must be designed inside or installed outside the sensor for heating. Meanwhile, NO2 sensors based on PbS quantum dots (QDs) are advantageous as they can operate at room temperature and can be easily manufactured through a solution process rather than a complicated semiconductor process. Herein, a NO2 sensor was fabricated by doping PbS QDs with poly(3-hexylthiophene) (P3HT). The as-developed sensor exhibited high responsivity to 100-0.4-ppm NO2 gas with a resolution of 200 ppb owing to the stability of the thin film and high hole mobility of P3HT., (© 2024. The Author(s).)- Published
- 2024
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37. Are violence, harmful alcohol/substance use and poor mental health associated with increased genital inflammation?: A longitudinal cohort study with HIV-negative female sex workers in Nairobi, Kenya.
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Beattie TS, Pollock J, Kabuti R, Abramsky T, Kung'u M, Babu H, Huibner S, Udayakumar S, Nyamweya C, Okumu M, Mahero A, Beksinska A, Panneh M, Ngurukiri P, Irungu E, Adhiambo W, Muthoga P, Seeley J, Weiss H, Kaul R, and Kimani J
- Abstract
Violence, alcohol use, substance use and poor mental health have been linked with increased HIV acquisition risk, and genital inflammation enhances HIV susceptibility. We examined whether past 6 month experience of these exposures was associated with increased genital inflammation, thereby providing a biological link between these exposures and HIV acquisition risk. The Maisha Fiti study was a longitudinal mixed-methods study of female sex workers in Nairobi, Kenya. Behavioural-biological surveys were conducted at baseline (June-December 2019) and endline (June 2020-March 2021). Analyses were restricted to HIV-negative women (n = 746). Women with raised levels of at least 5 of 9 genital inflammatory cytokines were defined as having genital inflammation. Multivariable logistic regression models were used to estimate (i) baseline associations between genital inflammation and violence, harmful alcohol/substance use, and poor mental health, and (ii) longitudinal associations between these exposures at different survey rounds, and genital inflammation at follow-up. Inflammation data was available for 711 of 746 (95.3%) women at baseline; 351 (50.1%) had genital inflammation, as did 247 (46.7%) at follow-up. At baseline, 67.8% of women had experienced physical and/or sexual violence in the past 6 months, 33.9% had harmful alcohol use, 26.4% had harmful substance use, 25.5% had moderate/severe depression/anxiety, and 13.9% had post-traumatic stress disorder. In adjusted analyses, there was no evidence that these exposures were associated cross-sectionally or longitudinally with genital inflammation. We report no associations between past 6 month experience of violence, harmful alcohol/substance use, or poor mental health, and immune parameters previously associated with HIV risk. This suggests that the well-described epidemiological associations between these exposures and HIV acquisition do not appear to be mediated by genital immune changes, or that any such changes are relatively short-lived. High prevalences of these exposures suggest an urgent need for sex-worker specific violence, alcohol/substance use and mental health interventions., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Beattie et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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38. Factors Influencing Facial Paralysis Recovery: A Retrospective Cohort Study Using Electronic Medical Records.
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Ahn E, Choi Y, and Lee S
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- Humans, Male, Female, Retrospective Studies, Adult, Middle Aged, Republic of Korea, Bell Palsy, Facial Paralysis, Aged, Treatment Outcome, Electronic Health Records
- Abstract
This study aims to report on treatment outcomes and related factors in Bell's palsy patients by analyzing Electronic Medical Records (EMR) data. To assess the impact on the duration until improvement in House-Brackmann grading post-onset, we conducted an analysis of inpatient records for Bell's palsy patients admitted to a traditional Korean medicine hospital from 2018 to 2022. A total of 1049 subjects were included in the analysis. Contributing factors to a duration of more than 14 days until improvement in HB Grade included age 40 or above, male gender, an initial period of more than 7 days from onset to admission, a history of past recurrence, and the indication for adjunctive therapy. To generalize the adaptation of adjunctive traditional Korean medicine treatment indications to treatment outcomes, larger-scale studies encompassing a broader patient population will be necessary.
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- 2024
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39. Challenges and innovations in managing a complex giant bilateral juvenile nasopharyngeal angiofibroma with intracranial extension.
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Eugine R, Ps S, Bhardwaj A, and Sahu MP
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- Humans, Male, Brain Neoplasms therapy, Craniotomy methods, Adult, Young Adult, Magnetic Resonance Imaging, Angiofibroma surgery, Angiofibroma therapy, Angiofibroma diagnosis, Nasopharyngeal Neoplasms therapy, Nasopharyngeal Neoplasms surgery, Embolization, Therapeutic methods
- Abstract
Juvenile nasopharyngeal angiofibroma (JNA) is a highly vascular, benign and locally aggressive tumour that predominantly affects adolescent males. Recognised for its persistence and propensity to recur, patients usually present with gradual development of symptoms such as epistaxis and nasal obstruction over several months to years. Diagnosis typically combines clinical assessments and radiographic studies, often involving preoperative angiography to identify feeder vessels and facilitate embolisation, reducing intraoperative bleeding during surgical interventions. A comprehensive approach to treatment, considering both tumour characteristics and patient well-being, is crucial, particularly when dealing with cases involving intracranial extension. Surgical excision remains the primary treatment for angiofibroma, though radiotherapy is considered for cases with intracranial extension. This case report outlines a case involving a young man in his 20s with a large bilateral JNA extending into the intracranial area. The patient underwent preoperative embolisation followed by surgical resection using a nasofrontomaxillary swing approach with a bifrontal craniotomy window. This alternative approach provided enhanced exposure to address the involvement of the infratemporal fossa, anterior and middle skull base. Postoperatively, residual intracranial tumour was managed with radiation therapy. Over a 2-year follow-up, the patient remains asymptomatic, with a minor postradiation reduction in the intracranial component's size., Competing Interests: Competing interests: None declared., (© BMJ Publishing Group Limited 2024. No commercial re-use. See rights and permissions. Published by BMJ.)
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- 2024
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40. Five-day Wearable Respiratory Support With a Novel Ambulatory Pulmonary Assist System in an Awake Ovine Model.
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Hong Y, Shin S, Nasim U, Scala HM, Roberts KG, Potchernikov AS, Woolley BE, Skoog DJ, Bacchetta M, and Cook KE
- Abstract
Background: The pulmonary assist system (PAS) is a wearable respiratory support system that is currently under development for patients with chronic lung disease as a bridge to lung transplantation or as destination therapy. This study evaluates the long-term performance and biocompatibility of the PAS in a 5-d awake, ovine model., Methods: The PAS was attached to normal sheep in venovenous configuration. Components of the PAS included a 0.9 m2 surface area oxygenator and a lightweight, battery-powered axial flow pump. The system was also tested using the Abbott PediMag as the control pump. Each sheep was supported on the PAS for 5 d with 2 L/min blood flow and 4 L/min sweep gas. Activated clotting times of 200-240 s were maintained using intravenous heparin. Pump performance, oxygen transfer, oxygenator resistance, and hematologic parameters were measured throughout the support., Results: The PAS, either using the axial flow pump or PediMag (n = 4 each), was well tolerated by the sheep without signs of device-related organ damage or hemolysis. All the studies achieved the full, 5-d study duration. The oxygenator resistance remained consistent without significant clot formation in all experiments with an average resistance of 2.55 ± 0.10 mm Hg/(L/min). The system achieved an average oxygen transfer rate of 116.4 ± 5.5 mL/min, with an average Hb concentration of 9.2 ± 0.6 g/dL. White blood cell, platelet, and hematocrit levels also remained stable and within normal limits throughout the study period., Conclusions: The PAS provided 5 d of uncomplicated ambulatory respiratory support with minimal clot formation, stable gas exchange, blood flow resistance, and hematologic parameters., Competing Interests: This research was supported by the US Army Congressionally Directed Medical Research Programs grant (W81XWH2110591). Y.H. is supported, in part, by the National Heart, Lung, and Blood Institute (T32HL160526) and Thoracic Surgery Foundation Resident Research fellowships. D.J.S., M.B., and K.E.C. are equity owners of Advanced Respiratory Technologies Inc. The other authors declare no conflicts of interest., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2024
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41. Gene editing of the E3 ligase PIRE1 fine-tunes ROS production for enhanced bacterial disease resistance in tomato.
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Castro B, Baik S, Tran M, Zhu J, Li T, Tang A, Aoun N, Blundell AC, Gomez M, Zhang E, Cho MJ, Lowe-Power T, Siddique S, Staskawicz B, and Coaker G
- Abstract
Reactive oxygen species (ROS) accumulation is required for effective plant defense. Accumulation of the Arabidopsis NADPH oxidase RBOHD is regulated by phosphorylation of a conserved C-terminal residue (T912) leading to ubiquitination by the RING E3 ligase PIRE. Arabidopsis PIRE knockouts exhibit enhanced ROS production and resistance to the foliar pathogen Pseudomonas syringae . Here, we identified 170 PIRE homologs, which emerged in Tracheophytes and expanded in Angiosperms. We investigated the role of Solanum lycopersicum (tomato) PIRE homologs in regulating ROS production, RBOH stability, and disease resistance. Mutational analyses of residues corresponding to T912 in the tomato RBOHD ortholog, SlRBOHB, affected protein accumulation and ROS production in a PIRE- dependent manner. Using CRISPR-cas9, we generated mutants in two S. lycopersicum PIRE homologs ( SlPIRE ). SlPIRE1 edited lines ( Slpire1 ) in the tomato cultivar M82 displayed enhanced ROS production upon treatment with flg22, an immunogenic epitope of flagellin. Furthermore, Slpire1 exhibited decreased disease symptoms and bacterial accumulation when inoculated with foliar bacterial pathogens Pseudomonas syringae and Xanthomonas campestris . However, Slpire1 exhibited similar levels of colonization as wild type upon inoculation with diverse soilborne pathogens. These results indicate that phosphorylation and ubiquitination crosstalk regulate RBOHs in multiple plant species, and PIRE is a promising target for foliar disease control. This study also highlights the pathogen-specific role of PIRE , indicating its potential for targeted manipulation to enhance foliar disease resistance without affecting root-associated interactions, positioning PIRE as a promising target for improving overall plant health.
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- 2024
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42. COVID-19 Vaccination-Related Pericarditis: A Korean Nationwide Study.
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Lee N, Kim KH, Park JH, Cho JY, Cho SH, Kim DK, Kim SY, Kim EK, Choi EY, Choi JO, Cho S, Choi GH, Park H, Kim HY, Yoon HJ, Ahn Y, and Jeong MH
- Abstract
Objective: To investigate the incidence, characteristics, and outcomes of COVID-19 vaccine-related pericarditis (VRP) without myocarditis, we analyzed nationwide Korean data., Patients and Methods: This is a retrospective nationwide report including all vaccinated Koreans with COVID-19 vaccine of any platform (BNT162b2, mRNA-1273, ChAdOx1, or Ad26.COV2.S) from February 26 to December 31, 2021. We analyzed the confirmed cases of COVID-19 VRP by the Expert Adjudication Committee. The incidence, clinical characteristics, and outcomes of COVID-19 VRP were analyzed., Results: Among 44,322,068 Koreans with least one dose of COVID-19 vaccination, COVID-19 VRP was confirmed in 179 cases, with 1.73 per million shots (95% CI, 1.48 to 2.00 per million shots). The incidence of VRP was significantly higher in males than females (2.01 per 1 million doses vs 1.45 per 1 million doses, respectively; P=.029), in mRNA vaccines than in other vaccines (2.09 per 1 million doses vs 0.36 per 1 million doses, respectively; P<.001), and in those younger than 40 years of age than those older than 40 years of age (3.52 per 1 million doses vs 0.89 per 1 million doses, respectively; P<.001). The incidence of VRP was highest in males between the ages of 12 and 17 years (7.38 per 1 million doses; 95% CI, 2.01 to 16.07). Although there was no case of mortality, hemodynamically significant pericardial effusion requiring pericardial drainage was noted in 10 cases (5.6%)., Conclusion: COVID-19 VRP was very rare and developed mainly in association with mRNA vaccines, especially in males younger than 40 years of age. The clinical course of VRP was excellent, and there were no cases of mortality. However, the development of hemodynamically significant pericardial effusion should be carefully monitored., (Copyright © 2024 Mayo Foundation for Medical Education and Research. Published by Elsevier Inc. All rights reserved.)
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- 2024
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43. Tho2-mediated escort of Nrd1 regulates the expression of aging-related genes.
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Liu Y, Park JM, Lim S, Duan R, Lee DY, Choi D, Choi DK, Rhie BH, Cho SY, Ryu HY, and Ahn SH
- Subjects
- Aging genetics, Gene Expression Regulation, Fungal, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
The relationship between aging and RNA biogenesis and trafficking is attracting growing interest, yet the precise mechanisms are unknown. The THO complex is crucial for mRNA cotranscriptional maturation and export. Herein, we report that the THO complex is closely linked to the regulation of lifespan. Deficiencies in Hpr1 and Tho2, components of the THO complex, reduced replicative lifespan (RLS) and are linked to a novel Sir2-independent RLS control pathway. Although transcript sequestration in hpr1Δ or tho2Δ mutants was countered by exosome component Rrp6, loss of this failed to mitigate RLS defects in hpr1Δ. However, RLS impairment in hpr1Δ or tho2Δ was counteracted by the additional expression of Nrd1-specific mutants that interacted with Rrp6. This effect relied on the interaction of Nrd1, a transcriptional regulator of aging-related genes, including ribosome biogenesis or RNA metabolism genes, with RNA polymerase II. Nrd1 overexpression reduced RLS in a Tho2-dependent pathway. Intriguingly, Tho2 deletion mirrored Nrd1 overexpression effects by inducing arbitrary Nrd1 chromatin binding. Furthermore, our genome-wide ChIP-seq analysis revealed an increase in the recruitment of Nrd1 to translation-associated genes, known to be related to aging, upon Tho2 loss. Taken together, these findings underscore the importance of Tho2-mediated Nrd1 escorting in the regulation of lifespan pathway through transcriptional regulation of aging-related genes., (© 2024 The Authors. Aging Cell published by Anatomical Society and John Wiley & Sons Ltd.)
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- 2024
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44. RpUGT344J7 is involved in the reproduction switch of Rhopalosiphum padi with holocyclic life cycle.
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Wang S, Huang W, Li M, Wang N, Liu X, Chen M, and Peng X
- Subjects
- Animals, Male, Reproduction, Female, Insect Proteins genetics, Insect Proteins metabolism, Life Cycle Stages, Transcriptome, Aphids genetics, Aphids physiology, Aphids growth & development, Parthenogenesis
- Abstract
Many aphid species exhibit both cyclical parthenogenesis (CP) and the obligate parthenogenesis (OP) life history, which are genetically determined. In CP aphid lineages, the parthenogenetic individuals can switch from asexual to sexual reproduction quickly in response to environmental factors such as changes in photoperiod and temperature. However, the OP aphid lineages do not undergo sexual reproduction under any conditions. So far, mechanisms underlying the reproduction switch in CP aphids have not been fully elucidated. Rhopalosiphum padi, a serious worldwide insect pest of wheat, has both CP and OP lineages. Uridine diphosphate-glycosyltransferases (UGTs) are enzymes that participate in the metabolic detoxification of xenobiotics. Here, we identified 43 RpUGT genes from R. padi genome and transcriptome sequences, and found that: (1) the UGT content of the CP lineage was significantly higher than that in the OP lineage at the key time points when CP lineage mainly produce virginoparae, gynoparae, and males under inducing condition, while there were no significant difference under normal conditions; (2) RpUGT344J7 gene was highly expressed during the time points when CP lineages produce gynopara and males; (3) the critical time points for CP lineages to produce virginoparaee, gynoparae, and males were affected when the CP lineages were injected with dsRpUGT344J7; (4) the knockdown of RpUGT344J7 caused a significant reduction in the total number of virginoparae, gynoparae, and males in the offspring under inducing condition. The findings contribute to our understanding of the molecular mechanisms underlying the quick shift from asexual to sexual reproduction in aphid species., (© 2024 Institute of Zoology, Chinese Academy of Sciences.)
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- 2024
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45. The clinical features and prognostic factors of miliary tuberculosis in a high tuberculosis burden area.
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Wei X, Xie M, Wu S, and Bao Y
- Subjects
- Humans, Female, Male, Middle Aged, Retrospective Studies, Prognosis, Adult, Risk Factors, Aged, Comorbidity, China epidemiology, Young Adult, Tuberculosis, Miliary diagnosis, Tuberculosis, Miliary epidemiology
- Abstract
Background: Miliary Tuberculosis (TB) remains an important infectious disease that threatens human health. The clinical characteristics and prognostic factors of miliary TB are summarized in this study., Methods: The clinical information of miliary TB patients between 2010 and 2022 was retrospectively analyzed. Patients with miliary TB were characterized and compared to adverse outcomes cases. Factors independently associated with adverse outcomes were determined via multivariate logistic regression analysis., Results: A total of 288 patients were analyzed, including 181 with adverse outcomes. The clinical manifestations are atypical. 88.54% Of them experienced systemic symptoms, whilst 69.79% manifested respiratory symptoms. 40.97% Presented with neurologic symptoms, while 35.07% reported gastrointestinal symptoms. The major comorbidities were pharmacological immunosuppression (21.53%), pneumoconiosis (15.28%), diabetes (10.76%), and pregnancy or postpartum (7.29%). Regarding microbiology, most patients were diagnosed via sputum or Bronchoalveolar Lavage Fluid (BALF), pleural effusion, ascites, cerebrospinal fluid, urine TB-DNA, and tuberculosis culture. Meanwhile, 2.43% of patients were diagnosed via cerebrospinal fluid NGS. Independent risk factors predictive of adverse outcomes were current smoking, leukocytosis, elevated alanine aminotransferase (ALT) levels, and the combination of lymphopenia with bone marrow tuberculosis or tuberculous lymphadenitis. The accuracy of the model was validated by an area under the ROC curve of 0.753 (95% IC 0.697-0.810)., Conclusions: The clinical manifestations of miliary TB are atypical, and early diagnosis is challenging. The major comorbidities in miliary TB patients were pharmacological immunosuppression, pneumoconiosis, diabetes, pregnancy, and postpartum. Regarding etiological detection, multi-site and multi-type specimens should be collected for a timely diagnosis. Cerebrospinal fluid mNGS test may be a viable choice in some cases. Finally, current smoking, leukocytosis, elevated ALT levels, and the combination of lymphopenia with bone marrow tuberculosis or tuberculous lymphadenitis were identified as independent risk factors for adverse outcomes.
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- 2024
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46. Validation and measurement uncertainty of analytical methods for various azo dye adulterants in Curcuma longa L.
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Yang HJ, Lim S, Lee DH, Yun CI, and Kim YJ
- Abstract
Food adulteration involving the illegal addition of dyes to foodstuffs has become an alarming issue in recent years. This study developed and validated a high-performance liquid chromatography (HPLC)-DAD (diode array detector) method for the simultaneous determination of nine azo dyes (Butter Yellow, Sudan Orange G, Para Red, Sudan I, Sudan II, Sudan III, Sudan IV, Sudan Red 7B, and Scarlet 808). Moreover, a qualitative analysis method using liquid chromatography-tandem mass spectrometry was developed to more accurately identify peaks detected in HPLC-DAD. The calibration curve represented good linearity (r
2 ≥ 0.9998) over the measured concentration range of 0.5-25 mg/kg. limit of detection and limit of quantification were 0.01-0.04 and 0.04-0.12 mg/kg, respectively. Accuracy and precision were 96.0-102.6 and 0.16-2.01 (relative standard deviation%), respectively. Additionally, the measurement uncertainty and HorRat value were estimated. Several Curcuma longa L. distributed in Korea were collected and monitored for azo dye contaminants. PRACTICAL APPLICATION: The proposed HPLC-DAD method represents a significant advancement in the field, offering a reliable means of quantifying azo dyes and identifying their presence even at trace levels in adulterated turmeric. This not only contributes to ensuring the safety and integrity of turmeric products but also establishes precedent for robust analytical techniques in addressing food safety challenges., (© 2024 Institute of Food Technologists.)- Published
- 2024
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47. Prognostic value of CT body composition analysis for 1-year mortality after transcatheter aortic valve replacement.
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Soh S, Suh YJ, Lee S, Roh YH, Kwak YL, and Kim YJ
- Abstract
Objectives: To investigate the value of body composition indices derived from pre-procedural computed tomography (CT) in predicting 1-year mortality among patients who underwent transcatheter aortic valve replacement (TAVR)., Materials and Methods: We assessed consecutive patients who underwent TAVR between June 2016 and December 2021 at a single academic medical center. Skeletal muscle and subcutaneous fat area at the T4, T12, and L3 levels on pre-procedural CT were measured. The association between body composition and 1-year mortality was evaluated using Cox proportional hazard regression analysis., Results: Finally, 408 patients were included (185 men and 223 women; mean age, 81.7 ± 5.1 years; range, 62-98 years). Post-procedural death occurred in 13.2% of patients. The muscle-height index and fat-height index at the L3 level were more strongly correlated with those at the T12 level (r = 0.765, p < 0.001 and r = 0.932, p < 0.001, respectively) than with those at the T4 level (r = 0.535, p < 0.001 and r = 0.895, p < 0.001, respectively). The cumulative 1-year mortality rate was highest for patients with both sarcopenia and adipopenia (26%), followed by those with adipopenia only (17%), those with sarcopenia only (12%), and those with neither sarcopenia nor adipopenia (8%, p = 0.002). Multivariable analysis revealed that body composition at the T12 level was an independent risk factor for 1-year mortality (hazard ratio: 4.09, 95% confidence interval: 2.01-8.35) in patients with both sarcopenia and adipopenia (p < 0.001)., Conclusion: Sarcopenia or adipopenia assessed with CT at the thoracic level may be valuable for stratifying 1-year all-cause mortality in patients who undergo TAVR., Clinical Relevance Statement: Skeletal muscle and subcutaneous fat mass indices at the level of T12, measured on pre-procedural CT, have value for risk stratification of 1-year all-cause mortality in patients who undergo transcatheter aortic valve replacement., Key Points: Sarcopenia and adipopenia are associated with the prognosis of patients undergoing transcatheter aortic valve replacement. Body composition at the T12 level was an independent risk factor for 1-year all-cause mortality. Sarcopenia or adipopenia assessed at T12 with pre-procedural CT is valuable for risk stratification., (© 2024. The Author(s), under exclusive licence to European Society of Radiology.)
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- 2024
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48. Methionine sulfoxide reductase B2 protects against cardiac complications in diabetes mellitus.
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Lee SH, Cho S, Lee JY, Kim JY, Kim S, Jeong M, Hong JY, Kim GY, Lee SW, Kim E, Kim J, Kim JW, Hwa J, and Kim WH
- Abstract
Diabetes mellitus (DM) is a progressive, chronic metabolic disorder characterized by high oxidative stress, which can lead to cardiac damage. Methionine sulfoxylation (MetO) of proteins by excessive reactive oxygen species (ROS) can impair the basic functionality of essential cellular proteins, contributing to heart failure. Methionine sulfoxide reductase B2 (MsrB2) can reverse oxidation induced MetO in mitochondrial proteins, so we investigated its role in diabetic cardiomyopathy. We observed that DM-induced heart damage in diabetic mice model is characterized by increased ROS, increased protein MetO with mitochondria structural pathology, and cardiac fibrosis. In addition, MsrB2 was significantly increased in mouse DM cardiomyocytes, supporting the induction of a protective process. Further, MsrB2 directly induces Parkin and LC3 activation (mitophagy markers) in cardiomyocytes. In MsrB2, knockout mice displayed abnormal electrophysiological function, as determined by ECG analysis. Histological analysis confirmed increased cardiac fibrosis and disrupted cardiac tissue in MsrB2 knockout DM mice. We then corroborated our findings in human DM heart samples. Our study demonstrates that increased MsrB2 expression in the heart protects against diabetic cardiomyopathy., (© 2024. The Author(s).)
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- 2024
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49. Multiporous ZIF-8 carbon/cellulose composite beads: Highly efficient and scalable adsorbents for water treatment.
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Lee K, Jeon Y, Kwon G, Lee S, Ko Y, Park J, Kim J, and You J
- Abstract
Metal-organic framework (MOF) particles are one of the most promising adsorbents for removing organic contaminants from wastewater. However, powder-type MOF particles face challenges in terms of utilization and recovery. In this study, a novel bead-type adsorbent was prepared using activated carbon based on the zeolitic imidazolate framework-8 (AC-ZIF-8) and a regenerated cellulose hydrogel for dye removal. AC-ZIF-8 particles with a large surface area were obtained by carbonization and chemical activation with KOH. The AC-ZIF-8 powders were efficiently immobilized in hydrophilic cellulose hydrogel beads via cellulose dissolution/regeneration. The prepared AC-ZIF-8/cellulose hydrogel (AC-ZIF-8/CH) composite beads exhibit a large specific surface area of 1412.8 m
2 /g and an excellent maximum adsorption capacity of 565.13 mg/g for Rhodamine B (RhB). Moreover, the AC-ZIF-8/CH beads were effective over a wide range of pH, temperatures and for different types of dyes. These composite beads also offer economic benefits through desorption of dyes for recycling. The AC-ZIF-8/CH beads can be produced in substantial amounts and used as fillers in a fixed-bed column system, which can purify the continuous inflow of dye solutions. These findings suggest that our simple approach for preparing high-performance adsorbent beads will broaden the application of dye adsorbents, oil-water separation, and catalysts., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
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50. Publisher Correction: Alleviation of preeclampsia-like symptoms through PlGF and eNOS regulation by hypoxia- and NF-κB-responsive miR-214-3p deletion.
- Author
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Kim S, Shim S, Kwon J, Ryoo S, Byeon J, Hong J, Lee JH, Kwon YG, Kim JY, and Kim YM
- Published
- 2024
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