1. Transferable Immunoglobulin A–Coated Odoribacter splanchnicus in Responders to Fecal Microbiota Transplantation for Ulcerative Colitis Limits Colonic Inflammation
- Author
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John Hambor, Lance Chou, Randy S. Longman, Monica Viladomiu, Wen-Bing Jin, Svetlana Lima, Su-Ellen Brown, Chun-Jun Guo, Vinita Jacob, Silvia Pires, Ylaine Gerardin, Gregory G. Putzel, Carl V. Crawford, Ellen Scherl, and Lasha Gogokhia
- Subjects
Immunoglobulin A ,Colon ,T-Lymphocytes, Regulatory ,Inflammatory bowel disease ,Article ,Immune system ,medicine ,Animals ,Germ-Free Life ,Humans ,Microbiome ,Intestinal Mucosa ,Colitis ,Immunity, Mucosal ,Intraepithelial Lymphocytes ,Mice, Knockout ,Clinical Trials as Topic ,Hepatology ,biology ,Bacteroidetes ,business.industry ,Gastroenterology ,FOXP3 ,Forkhead Transcription Factors ,Fecal Microbiota Transplantation ,Nuclear Receptor Subfamily 1, Group F, Member 3 ,medicine.disease ,Ulcerative colitis ,Gastrointestinal Microbiome ,Mice, Inbred C57BL ,Disease Models, Animal ,Treatment Outcome ,Immunology ,biology.protein ,Metagenome ,Colitis, Ulcerative ,Metagenomics ,Antibody ,business - Abstract
Background & Aims Fecal microbiota transplantation (FMT) is an emerging treatment modality for ulcerative colitis (UC). Several randomized controlled trials have shown efficacy for FMT in the treatment of UC, but a better understanding of the transferable microbiota and their immune impact is needed to develop more efficient microbiome-based therapies for UC. Methods Metagenomic analysis and strain tracking was performed on 60 donor and recipient samples receiving FMT for active UC. Sorting and sequencing of immunoglobulin (Ig) A–coated microbiota (called IgA-seq) was used to define immune-reactive microbiota. Colonization of germ-free or genetically engineered mice with patient-derived strains was performed to determine the mechanism of microbial impact on intestinal immunity. Results Metagenomic analysis defined a core set of donor-derived transferable bacterial strains in UC subjects achieving clinical response, which predicted response in an independent trial of FMT for UC. IgA-seq of FMT recipient samples and gnotobiotic mice colonized with donor microbiota identified Odoribacter splanchnicus as a transferable strain shaping mucosal immunity, which correlated with clinical response and the induction of mucosal regulatory T cells. Colonization of mice with O splanchnicus led to an increase in Foxp3+/RORγt+ regulatory T cells, induction of interleukin10, and production of short chain fatty acids, all of which were required for O splanchnicus to limit colitis in mouse models. Conclusions This work provides the first evidence of transferable, donor-derived strains that correlate with clinical response to FMT in UC and reveals O splanchnicus as a key component promoting both metabolic and immune cell protection from colitis. These mechanistic features will help enable strategies to enhance the therapeutic efficacy of microbial therapy for UC. Clinicaltrials.gov ID NCT02516384 .
- Published
- 2022
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