369 results on '"Stone HA"'
Search Results
2. Damping of liquid sloshing by foams
- Author
-
Sauret, A, Boulogne, F, Cappello, J, Dressaire, E, and Stone, HA
- Subjects
physics.flu-dyn ,cond-mat.soft ,Mathematical Sciences ,Physical Sciences ,Engineering ,Fluids & Plasmas - Abstract
When a container is set in motion, the free surface of the liquid starts to oscillate or slosh. Such effects can be observed when a glass of water is handled carelessly and the fluid sloshes or even spills over the rims of the container. However, beer does not slosh as readily as water, which suggests that foam could be used to damp sloshing. In this work, we study experimentally the effect on sloshing of a liquid foam placed on top of a liquid bath. We generate a monodisperse two-dimensional liquid foam in a rectangular container and track the motion of the foam. The influence of the foam on the sloshing dynamics is experimentally characterized: only a few layers of bubbles are sufficient to significantly damp the oscillations. We rationalize our experimental findings with a model that describes the foam contribution to the damping coefficient through viscous dissipation on the walls of the container. Then we extend our study to confined three-dimensional liquid foam and observe that the behavior of 2D and confined 3D systems are very similar. Thus, we conclude that only the bubbles close to the walls have a significant impact on the dissipation of energy. The possibility to damp liquid sloshing using foam is promising in numerous industrial applications such as the transport of liquefied gas in tankers or for propellants in rocket engines.
- Published
- 2015
3. Separation of particles by size from a suspension using the motion of a confined bubble
- Author
-
Yu, YE, Khodaparast, S, and Stone, HA
- Subjects
Condensed Matter::Soft Condensed Matter ,Physics::Fluid Dynamics - Abstract
When confined in a liquid-filled circular cylinder, a long air bubble moves slightly faster than the bulk liquid as a small fraction of the liquid leaks through a very thin annular gap between the bubble and the internal wall of the cylinder. At low velocities, the thickness of this lubricating film formed around the bubble is set only by the liquid properties and the translational speed of the bubble and thus can be tuned in a simple fashion. Here, we use this setting to filter, based on size, micron-size particles that are originally dispersed in a suspension. Furthermore, we apply this process for separation of particles from a polydisperse solution. The bubble interface is free of particles initially, and particles of different sizes can enter the liquid film region. Particle separation occurs when the thickness of the lubricating liquid film falls between the diameters of the two different particles. While large particles will be collected at the bubble surface, smaller particles can leak through the thin film and reach the fluid region behind the bubble. As a result, the film thickness can be fine-tuned by simply adjusting the speed of a translating confined bubble, so as to achieve separation of particles by size based on the relative particle diameter compared to the film thickness.
- Published
- 2018
4. Hydraulic design of pine needles: One-dimensional optimization for single-vein leaves
- Author
-
Zwieniecki, MA, Stone, HA, Leigh, A, Boyce, CK, Holbrook, NM, Zwieniecki, MA, Stone, HA, Leigh, A, Boyce, CK, and Holbrook, NM
- Abstract
Single-vein leaves have the simplest hydraulic design possible, yet even this linear water delivery system can be modulated to improve physiological performance. We determined the optimal distribution of transport capacity that minimizes pressure drop per given investment in xylem permeability along the needle for a given length without a change in total water delivery, or maximizes needle length for a given pressure difference between petiole and needle tip. This theory was tested by comparative analysis of the hydraulic design of three pine species that differ in the length of their needles [Pinus palustris (Engl.) Miller, ∼50 cm; Pinus ponderosa Lawson & Lawson, ∼20 cm and Pinus rigida Miller, ∼5 cm]. In all three species, the distribution of hydraulic permeability was similar to that predicted by the optimum solution. The needles of P. palustris showed an almost perfect match between predicted and actual hydraulic optimum solution, providing evidence that vein design is a significant factor in the hydraulic design of pine leaves. © 2005 Blackwell Publishing Ltd.
- Published
- 2006
5. Slow translation, rotation or oscillation of a disk in a rotating fluid: effect of a plane wall or another disk.
- Author
-
Davis, AMJ and Stone, HA
- Subjects
- *
ROTATING masses of fluid , *HYDRODYNAMICS - Abstract
The steady axial translation and rotation of a circular disk in a rotating viscous fluid is examined as a function of the Taylor number. Both the effect of a second nearby disk and the presence of a plane upper boundary are studied for a wide range of separation distances. A compact solution procedure, based upon a dual integral equation approach, is outlined and also applied to the study of oscillatory disk motion in a rotating fluid. The effects of a wall or a second particle provide insight into multiparticle interactions in rotating fluid systems, which have not received a systematic treatment to date. [ABSTRACT FROM AUTHOR]
- Published
- 1998
- Full Text
- View/download PDF
6. ESWT.
- Author
-
Smith A, Stone HA, Schneider MJ, Taubman MR, and Gurvis DE
- Published
- 2008
7. ESWT query.
- Author
-
Mullen B, Weil L Jr., and Stone HA
- Published
- 2006
8. Motorless transport of microtubules along tubulin, RanGTP, and salt gradients.
- Author
-
Shim S, Gouveia B, Ramm B, Valdez VA, Petry S, and Stone HA
- Subjects
- Animals, Biological Transport, Diffusion, Microtubules metabolism, Tubulin metabolism, Xenopus laevis, ran GTP-Binding Protein metabolism
- Abstract
Microtubules are dynamic filaments that assemble spindles for eukaryotic cell division. As the concentration profiles of soluble tubulin and regulatory proteins are non-uniform during spindle assembly, we asked if diffusiophoresis - motion of particles under solute gradients - can act as a motorless transport mechanism for microtubules. We identify the migration of stable microtubules along cytoplasmic and higher concentration gradients of soluble tubulin, MgCl
2 , Mg-ATP, Mg-GTP, and RanGTP at speeds O(100) nm/s, validating the diffusiophoresis hypothesis. Using two buffers (BRB80 and CSF-XB), microtubule behavior under MgCl2 gradients is compared with negatively charged particles and analyzed with a multi-ion diffusiophoresis and diffusioosmosis model. Microtubule diffusiophoresis under gradients of tubulin and RanGTP is also compared with the charged particles and analyzed with a non-electrolyte diffusiophoresis model. Further, we find that tubulin and RanGTP display concentration dependent cross-diffusion that influences microtubule diffusiophoresis. Finally, using Xenopus laevis egg extract, we show that diffusiophoretic transport occurs in an active cytoplasmic environment., (© 2024. The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
9. Free-swimming bacteria transcriptionally respond to shear flow.
- Author
-
Ramachandran A, Stone HA, and Gitai Z
- Subjects
- Transcription, Genetic, Plankton genetics, Models, Biological, Pseudomonas aeruginosa genetics, Pseudomonas aeruginosa physiology, Pseudomonas aeruginosa metabolism, Gene Expression Regulation, Bacterial, Oxygen metabolism, Quorum Sensing physiology, Quorum Sensing genetics
- Abstract
Surface-attached cells can sense and respond to shear flow, but planktonic (free-swimming) cells are typically assumed to be oblivious to any flow that carries them. Here, we find that planktonic bacteria can transcriptionally respond to flow, inducing expression changes that are beneficial in flow. Specifically, we use microfluidic experiments and quantitative modeling to show that in the presence of flow, planktonic Pseudomonas aeruginosa induce shear rate-dependent genes that promote growth in low-oxygen environments. Untangling this mechanism revealed that in flow, motile P. aeruginosa spatially redistribute, leading to cell density changes that activate quorum sensing, which in turn enhances the oxygen uptake rate. In diffusion-limited environments, including those commonly encountered by bacteria, flow-induced cell density gradients also independently generate oxygen gradients that alter gene expression. Mutants deficient in this flow-responsive mechanism exhibit decreased fitness in flow, suggesting that this dynamic coupling of biological and mechanical processes can be physiologically significant., Competing Interests: Competing interests statement:The authors declare no competing interest.
- Published
- 2024
- Full Text
- View/download PDF
10. The exchange dynamics of biomolecular condensates.
- Author
-
Zhang Y, Pyo AGT, Kliegman R, Jiang Y, Brangwynne CP, Stone HA, and Wingreen NS
- Subjects
- Polymers chemistry, Biomolecular Condensates chemistry, Biomolecular Condensates metabolism
- Abstract
A hallmark of biomolecular condensates formed via liquid-liquid phase separation is that they dynamically exchange material with their surroundings, and this process can be crucial to condensate function. Intuitively, the rate of exchange can be limited by the flux from the dilute phase or by the mixing speed in the dense phase. Surprisingly, a recent experiment suggests that exchange can also be limited by the dynamics at the droplet interface, implying the existence of an 'interface resistance'. Here, we first derive an analytical expression for the timescale of condensate material exchange, which clearly conveys the physical factors controlling exchange dynamics. We then utilize sticker-spacer polymer models to show that interface resistance can arise when incident molecules transiently touch the interface without entering the dense phase, i.e., the molecules 'bounce' from the interface. Our work provides insight into condensate exchange dynamics, with implications for both natural and synthetic systems., Competing Interests: YZ, AP, RK, YJ, HS, NW No competing interests declared, CB C.P.B. is a founder and consultant for Nereid Therapeutics, (© 2023, Zhang et al.)
- Published
- 2024
- Full Text
- View/download PDF
11. Deformation dynamics of nanopores upon water imbibition.
- Author
-
Sanchez J, Dammann L, Gallardo L, Li Z, Fröba M, Meißner RH, Stone HA, and Huber P
- Abstract
Capillarity-driven transport in nanoporous solids is widespread in nature and crucial for modern liquid-infused engineering materials. During imbibition, curved menisci driven by high negative Laplace pressures exert an enormous contractile load on the porous matrix. Due to the challenge of simultaneously monitoring imbibition and deformation with high spatial resolution, the resulting coupling of solid elasticity to liquid capillarity has remained largely unexplored. Here, we study water imbibition in mesoporous silica using optical imaging, gravimetry, and high-resolution dilatometry. In contrast to an expected Laplace pressure-induced contraction, we find a square-root-of-time expansion and an additional abrupt length increase when the menisci reach the top surface. The final expansion is absent when we stop the imbibition front inside the porous medium in a dynamic imbibition-evaporation equilibrium, as is typical for transpiration-driven hydraulic transport in plants, especially in trees. These peculiar deformation behaviors are validated by single-nanopore molecular dynamics simulations and described by a continuum model that highlights the importance of expansive surface stresses at the pore walls (Bangham effect) and the buildup or release of contractile Laplace pressures as menisci collectively advance, arrest, or disappear. Our model suggests that these observations apply to any imbibition process in nanopores, regardless of the liquid/solid combination, and that the Laplace contribution upon imbibition is precisely half that of vapor sorption, due to the linear pressure drop associated with viscous flow. Thus, simple deformation measurements can be used to quantify surface stresses and Laplace pressures or transport in a wide variety of natural and artificial porous media., Competing Interests: Competing interests statement:The authors declare no competing interest.
- Published
- 2024
- Full Text
- View/download PDF
12. Soft matter physics of the ground beneath our feet.
- Author
-
Voigtländer A, Houssais M, Bacik KA, Bourg IC, Burton JC, Daniels KE, Datta SS, Del Gado E, Deshpande NS, Devauchelle O, Ferdowsi B, Glade R, Goehring L, Hewitt IJ, Jerolmack D, Juanes R, Kudrolli A, Lai CY, Li W, Masteller C, Nissanka K, Rubin AM, Stone HA, Suckale J, Vriend NM, Wettlaufer JS, and Yang JQ
- Abstract
The soft part of the Earth's surface - the ground beneath our feet - constitutes the basis for life and natural resources, yet a general physical understanding of the ground is still lacking. In this critical time of climate change, cross-pollination of scientific approaches is urgently needed to better understand the behavior of our planet's surface. The major topics in current research in this area cross different disciplines, spanning geosciences, and various aspects of engineering, material sciences, physics, chemistry, and biology. Among these, soft matter physics has emerged as a fundamental nexus connecting and underpinning many research questions. This perspective article is a multi-voice effort to bring together different views and approaches, questions and insights, from researchers that work in this emerging area, the soft matter physics of the ground beneath our feet. In particular, we identify four major challenges concerned with the dynamics in and of the ground: (I) modeling from the grain scale, (II) near-criticality, (III) bridging scales, and (IV) life. For each challenge, we present a selection of topics by individual authors, providing specific context, recent advances, and open questions. Through this, we seek to provide an overview of the opportunities for the broad Soft Matter community to contribute to the fundamental understanding of the physics of the ground, strive towards a common language, and encourage new collaborations across the broad spectrum of scientists interested in the matter of the Earth's surface.
- Published
- 2024
- Full Text
- View/download PDF
13. Exact analytical solution of the Flory-Huggins model and extensions to multicomponent systems.
- Author
-
de Souza JP and Stone HA
- Abstract
The Flory-Huggins theory describes the phase separation of solutions containing polymers. Although it finds widespread application from polymer physics to materials science to biology, the concentrations that coexist in separate phases at equilibrium have not been determined analytically, and numerical techniques are required that restrict the theory's ease of application. In this work, we derive an implicit analytical solution to the Flory-Huggins theory of one polymer in a solvent by applying a procedure that we call the implicit substitution method. While the solutions are implicit and in the form of composite variables, they can be mapped explicitly to a phase diagram in composition space. We apply the same formalism to multicomponent polymeric systems, where we find analytical solutions for polydisperse mixtures of polymers of one type. Finally, while complete analytical solutions are not possible for arbitrary mixtures, we propose computationally efficient strategies to map out coexistence curves for systems with many components of different polymer types., (© 2024 Author(s). Published under an exclusive license by AIP Publishing.)
- Published
- 2024
- Full Text
- View/download PDF
14. Electrically mediated self-assembly and manipulation of drops at an interface.
- Author
-
Kaneelil PR, de Souza JP, Turk G, Pahlavan AA, and Stone HA
- Abstract
The fluid-fluid interface is a complex environment for a floating object where the statics and dynamics may be governed by capillarity, gravity, inertia, and other external body forces. Yet, the alignment of these forces in intricate ways may result in beautiful pattern formation and self-assembly of these objects, as in the case of crystalline order observed with bubble rafts or colloidal particles. While interfacial self-assembly has been explored widely, controlled manipulation of floating objects, e.g. drops, at the fluid-fluid interface still remains a challenge largely unexplored. In this work, we reveal the self-assembly and manipulation of water drops floating at an oil-air interface. We show that the assembly occurs due to electrostatic interactions between the drops and their environment. We highlight the role of the boundary surrounding the system by showing that even drops with a net zero electric charge can self-assemble under certain conditions. Using experiments and theory, we show that the depth of the oil bath plays an important role in setting the distance between the self-assembled drops. Furthermore, we demonstrate ways to manipulate the drops actively and passively at the interface.
- Published
- 2024
- Full Text
- View/download PDF
15. A calibration-free model of micropipette aspiration for measuring properties of protein condensates.
- Author
-
Roggeveen JV, Wang H, Shi Z, and Stone HA
- Subjects
- Viscosity, Calibration, Proteins chemistry, Biomolecular Condensates chemistry, Hydrodynamics, Surface Tension
- Abstract
There is growing evidence that biological condensates, which are also referred to as membraneless organelles, and liquid-liquid phase separation play critical roles regulating many important cellular processes. Understanding the roles these condensates play in biology is predicated on understanding the material properties of these complex substances. Recently, micropipette aspiration (MPA) has been proposed as a tool to assay the viscosity and surface tension of condensates. This tool allows the measurement of both material properties in one relatively simple experiment, in contrast to many other techniques that only provide one or a ratio of parameters. While this technique has been commonly used in the literature to determine the material properties of membrane-bound objects dating back decades, the model describing the dynamics of MPA for objects with an external membrane does not correctly capture the hydrodynamics of unbounded fluids, leading to a calibration parameter several orders of magnitude larger than predicted. In this work we derive a new model for MPA of biological condensates that does not require any calibration and is consistent with the hydrodynamics of the MPA geometry. We validate the predictions of this model by conducting MPA experiments on a standard silicone oil of known material properties and are able to predict the viscosity and surface tension using MPA. Finally, we reanalyze with this new model the MPA data presented in previous works for condensates formed from LAF-1 RGG domains., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2023 Biophysical Society. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
16. Rapid Room-Temperature Aerosol Dehydration Versus Spray Drying: A Novel Paradigm in Biopharmaceutical Drying Technologies.
- Author
-
Poozesh S, Mezhericher M, Pan Z, Chaudhary U, Manikwar P, and Stone HA
- Subjects
- Humans, Temperature, Dehydration, Prospective Studies, Aerosols chemistry, Freeze Drying methods, Technology, Powders chemistry, Particle Size, Administration, Inhalation, Spray Drying, Biological Products
- Abstract
To ensure the high quality of biopharmaceutical products, it is imperative to implement specialized unit operations that effectively safeguard the structural integrity of large molecules. While lyophilization has long been a reliable process, spray drying has recently garnered attention for its particle engineering capabilities for the pulmonary route of administration. However, maintaining the integrity of biologics during spray drying remains a challenge. To address this issue, we explored a novel dehydration system based on aerosol-assisted room-temperature drying of biological formulations recently developed at Princeton University, called Rapid Room-Temperature Aerosol Dehydration. We compared the quality attributes of the bulk powder of biopharmaceutical products manufactured using this drying technology with that of traditional spray drying. For all the fragment antigen-binding formulations tested, in terms of protein degradation and aerosol performance, we were able to achieve a better product quality using this drying technology compared to the spray drying technique. We also highlight areas for improvement in future prototypes and prospective commercial versions of the system. Overall, the offered dehydration system holds potential for improving the quality and diversity of biopharmaceutical products and may pave the way for more efficient and effective production methods in the biopharma industry., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this article., (Copyright © 2023 American Pharmacists Association. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
17. High-throughput measurement of elastic moduli of microfibers by rope coiling.
- Author
-
Liu Y, Lo JHY, Nunes JK, Stone HA, and Shum HC
- Abstract
There are many fields where it is of interest to measure the elastic moduli of tiny fragile fibers, such as filamentous bacteria, actin filaments, DNA, carbon nanotubes, and functional microfibers. The elastic modulus is typically deduced from a sophisticated tensile test under a microscope, but the throughput is low and limited by the time-consuming and skill-intensive sample loading/unloading. Here, we demonstrate a simple microfluidic method enabling the high-throughput measurement of the elastic moduli of microfibers by rope coiling using a localized compression, where sample loading/unloading are not needed between consecutive measurements. The rope coiling phenomenon occurs spontaneously when a microfiber flows from a small channel into a wide channel. The elastic modulus is determined by measuring either the buckling length or the coiling radius. The throughput of this method, currently 3,300 fibers per hour, is a thousand times higher than that of a tensile tester. We demonstrate the feasibility of the method by testing a nonuniform fiber with axially varying elastic modulus. We also demonstrate its capability for in situ inline measurement in a microfluidic production line. We envisage that high-throughput measurements may facilitate potential applications such as screening or sorting by mechanical properties and real-time control during production of microfibers., Competing Interests: Competing interests statement:Y.L., J.K.N., H.A.S., and H.C.S. are co-inventors of a filed US patent no. 63/367,173, which describes the methods used herein. H.C.S. is a scientific advisor of EN Technology Limited, MicroDiagnostics Limited, PharmaEase Tech Limited, and Upgrade Biopolymers Limited in which he owns some equity, and a managing director of the research center Advanced Biomedical Instrumentation Centre Limited. The works in this paper are however not directly related to the works of these entities, as far as we know.
- Published
- 2024
- Full Text
- View/download PDF
18. Bacterial spores respond to humidity similarly to hydrogels.
- Author
-
Gor GY, Scherer GW, and Stone HA
- Subjects
- Humidity, Elasticity, Chemical Phenomena, Bacillus subtilis, Spores, Bacterial, Hydrogels
- Abstract
Bacterial spores have outstanding properties from the materials science perspective, which allow them to survive extreme environmental conditions. Recent work by [S. G. Harrellson et al. , Nature 619 , 500-505 (2023)] studied the mechanical properties of Bacillus subtilis spores and the evolution of these properties with the change of humidity. The experimental measurements were interpreted assuming that the spores behave as water-filled porous solids, subjected to hydration forces. Here, we revisit their experimental data using literature data on vapor sorption on spores and ideas from polymer physics. We demonstrate that upon the change of humidity, the spores behave like rubber with respect to their swelling, elasticity, and relaxation times. This picture is consistent with the knowledge of the materials comprising the bacterial cell walls-cross-linked peptidoglycan. Our results provide an interpretation of the mechanics of bacterial spores and can help in developing synthetic materials mimicking the mechanical properties of the spores., Competing Interests: Competing interests statement:The authors declare no competing interest.
- Published
- 2024
- Full Text
- View/download PDF
19. Building on-chip cytoskeletal circuits via branched microtubule networks.
- Author
-
Zaferani M, Song R, Petry S, and Stone HA
- Subjects
- Cytoskeleton metabolism, Axons metabolism, Microtubule-Associated Proteins metabolism, Tubulin metabolism, Microtubules metabolism
- Abstract
Controllable platforms to engineer robust cytoskeletal scaffolds have the potential to create novel on-chip nanotechnologies. Inspired by axons, we combined the branching microtubule (MT) nucleation pathway with microfabrication to develop "cytoskeletal circuits." This active matter platform allows control over the adaptive self-organization of uniformly polarized MT arrays via geometric features of microstructures designed within a microfluidic confinement. We build and characterize basic elements, including turns and divisions, as well as complex regulatory elements, such as biased division and MT diodes, to construct various MT architectures on a chip. Our platform could be used in diverse applications, ranging from efficient on-chip molecular transport to mechanical nano-actuators. Further, cytoskeletal circuits can serve as a tool to study how the physical environment contributes to MT architecture in living cells., Competing Interests: Competing interests statement:The authors declare no competing interest.
- Published
- 2024
- Full Text
- View/download PDF
20. Rayleigh-Taylor Instability in Soft Viscoelastic Solids.
- Author
-
Slutzky M, Hwang J, Stone HA, and Nunes JK
- Abstract
We present an experimental characterization of the gravity-driven Rayleigh-Taylor instability in viscoelastic solids. The instability creates periodic patterns on the free surface of the soft solids that are distinct from the previously studied elastic Rayleigh-Taylor instability. The experimental results are supported by the linear stability analysis reported here. We identify the dependence of the steady-state pattern of deformations on the gel's geometry, complex shear modulus, and surface tension. This study provides quantitative measures applicable to the design of tunable surface textures, soft machines, and 3D structures.
- Published
- 2024
- Full Text
- View/download PDF
21. Volatile Droplets on Water are Sculpted by Vigorous Marangoni-Driven Subphase Flow.
- Author
-
Li Y, Chen Y, Li Y, Stone HA, Pahlavan AA, and Granick S
- Abstract
The shapes of highly volatile oil-on-water droplets become strongly asymmetric when they are out of equilibrium. The unsaturated organic vapor atmosphere causes evaporation and leads to a strong Marangoni flow in the bath, unlike that previously seen in the literature. Inspecting these shapes experimentally on millisecond and submillimeter time and length scales and theoretically by scaling arguments, we confirm that Marangoni-driven convection in the subphase mechanically stresses the droplet edges to an extent that increases for organic droplets of smaller contact angle and accordingly smaller thickness. The viscous stress generated by the subphase overcomes the thermodynamic Laplace pressure. The oil droplets develop copious regularly spaced fingers, and these fingers develop spike-shaped and branched treelike structures. Unlike this behavior for single-component (surfactant-free) oil droplets, droplets composed of two miscible (surfactant-free) organic liquids develop a rim of the less volatile component along the droplet perimeter, from which jets of monodisperse smaller droplets eject periodically due to the Rayleigh-Plateau instability. When evaporation shrinks droplets to μm size, their shapes fluctuate chaotically, and ellipsoidal shapes rupture into smaller daughter droplets when subphase convection flow pulls them in opposite directions. The shape of the evaporating oil droplets is kneaded and sculpted by vigorous flow in the water subphase.
- Published
- 2023
- Full Text
- View/download PDF
22. Protein condensation regulates water availability in cells.
- Author
-
de Souza JP and Stone HA
- Subjects
- Biophysics, Biophysical Phenomena, Water, Biochemistry
- Published
- 2023
- Full Text
- View/download PDF
23. Anomalous crystalline ordering of particles in a viscoelastic fluid under high shear.
- Author
-
Sun S, Xue N, Aime S, Kim H, Tang J, McKinley GH, Stone HA, and Weitz DA
- Abstract
Addition of particles to a viscoelastic suspension dramatically alters the properties of the mixture, particularly when it is sheared or otherwise processed. Shear-induced stretching of the polymers results in elastic stress that causes a substantial increase in measured viscosity with increasing shear, and an attractive interaction between particles, leading to their chaining. At even higher shear rates, the flow becomes unstable, even in the absence of particles. This instability makes it very difficult to determine the properties of a particle suspension. Here, we use a fully immersed parallel plate geometry to measure the high-shear-rate behavior of a suspension of particles in a viscoelastic fluid. We find an unexpected separation of the particles within the suspension resulting in the formation of a layer of particles in the center of the cell. Remarkably, monodisperse particles form a crystalline layer which dramatically alters the shear instability. By combining measurements of the velocity field and torque fluctuations, we show that this solid layer disrupts the flow instability and introduces a single-frequency component to the torque fluctuations that reflects a dominant velocity pattern in the flow. These results highlight the interplay between particles and a suspending viscoelastic fluid at very high shear rates.
- Published
- 2023
- Full Text
- View/download PDF
24. Locally optimal geometry for surface-enhanced diffusion.
- Author
-
Christensen AH, Gupta A, Chen G, Peters WS, Knoblauch M, Stone HA, and Jensen KH
- Abstract
Molecular diffusion in bulk liquids proceeds according to Fick's law, which stipulates that the particle current is proportional to the conductive area. This constrains the efficiency of filtration systems in which both selectivity and permeability are valued. Previous studies have demonstrated that interactions between the diffusing species and solid boundaries can enhance or reduce particle transport relative to bulk conditions. However, only cases that preserve the monotonic relationship between particle current and conductive area are known. In this paper, we expose a system in which the diffusive current increases when the conductive area diminishes. These examples are based on the century-old theory of a charged particle interacting with an electrical double layer. This surprising discovery could improve the efficiency of filtration and may advance our understanding of biological pore structures.
- Published
- 2023
- Full Text
- View/download PDF
25. Evaporation of alcohol droplets on surfaces in moist air.
- Author
-
Yang L, Pahlavan AA, Stone HA, and Bain CD
- Abstract
Droplets of alcohol-based formulations are common in applications from sanitizing sprays to printing inks. However, our understanding of the drying dynamics of these droplets on surfaces and the influence of ambient humidity is still very limited. Here, we report the drying dynamics of picoliter droplets of isopropyl alcohol deposited on a surface under controlled humidity. Condensation of water vapor in the ambient environment onto alcohol droplets leads to unexpectedly complex drying behavior. As relative humidity (RH) increases, we observed a variety of phenomena including enhanced spreading, nonmonotonic changes in the drying time, the formation of pancake-like shapes that suppress the coffee-ring effect, and the formation of water-rich films around an alcohol-rich drop. We developed a lubrication model that accounts for the coupling between the flow field within the drop, the shape of the drop, and the vapor concentration field. The model reproduces many of the experimentally observed morphological and dynamic features, revealing the presence of unusually large spatial compositional gradients within the evaporating droplet and surface-tension-gradient-driven flows arising from water condensation/evaporation at the surface of the droplet. One unexpected feature from the simulation is that water can evaporate and condense concurrently in different parts of the drop, providing fundamental insights that simpler models based on average fluxes lack. We further observed rim instabilities at higher RH that are well-described by a model based on the Rayleigh-Plateau instability. Our findings have implications for the testing and use of alcohol-based disinfectant sprays and printing inks.
- Published
- 2023
- Full Text
- View/download PDF
26. A note about convected time derivatives for flows of complex fluids.
- Author
-
Stone HA, Shelley MJ, and Boyko E
- Abstract
We present a direct derivation of the typical time derivatives used in a continuum description of complex fluid flows, harnessing the principles of the kinematics of line elements. The evolution of the microstructural conformation tensor in a flow and the physical interpretation of different derivatives then follow naturally.
- Published
- 2023
- Full Text
- View/download PDF
27. Diffusiophoretic Particle Penetration into Bacterial Biofilms.
- Author
-
Somasundar A, Qin B, Shim S, Bassler BL, and Stone HA
- Subjects
- Anti-Bacterial Agents pharmacology, Extracellular Polymeric Substance Matrix, Polymers, Biofilms, Anti-Infective Agents
- Abstract
Bacterial biofilms are communities of cells adhered to surfaces. These communities represent a predominant form of bacterial life on Earth. A defining feature of a biofilm is the three-dimensional extracellular polymer matrix that protects resident cells by acting as a mechanical barrier to the penetration of chemicals, such as antimicrobials. Beyond being recalcitrant to antibiotic treatment, biofilms are notoriously difficult to remove from surfaces. A promising, but relatively underexplored, approach to biofilm control is to disrupt the extracellular polymer matrix by enabling penetration of particles to increase the susceptibility of biofilms to antimicrobials. In this work, we investigate externally imposed chemical gradients as a mechanism to transport polystyrene particles into bacterial biofilms. We show that preconditioning the biofilm with a prewash step using deionized (DI) water is essential for altering the biofilm so it takes up the micro- and nanoparticles by the application of a further chemical gradient created by an electrolyte. Using different particles and chemicals, we document the transport behavior that leads to particle motion into the biofilm and its further reversal out of the biofilm. Our results demonstrate the importance of chemical gradients in disrupting the biofilm matrix and regulating particle transport in crowded macromolecular environments, and suggest potential applications of particle transport and delivery in other physiological systems.
- Published
- 2023
- Full Text
- View/download PDF
28. Hydration solids.
- Author
-
Harrellson SG, DeLay MS, Chen X, Cavusoglu AH, Dworkin J, Stone HA, and Sahin O
- Subjects
- Biological Transport, Fungi chemistry, Fungi metabolism, Microscopy, Atomic Force, Plants chemistry, Plants metabolism, Bacteria chemistry, Bacteria cytology, Bacteria metabolism, Humidity, Elasticity, Water metabolism, Wettability, Spores, Bacterial chemistry, Spores, Bacterial metabolism
- Abstract
Hygroscopic biological matter in plants, fungi and bacteria make up a large fraction of Earth's biomass
1 . Although metabolically inert, these water-responsive materials exchange water with the environment and actuate movement2-5 and have inspired technological uses6,7 . Despite the variety in chemical composition, hygroscopic biological materials across multiple kingdoms of life exhibit similar mechanical behaviours including changes in size and stiffness with relative humidity8-13 . Here we report atomic force microscopy measurements on the hygroscopic spores14,15 of a common soil bacterium and develop a theory that captures the observed equilibrium, non-equilibrium and water-responsive mechanical behaviours, finding that these are controlled by the hydration force16-18 . Our theory based on the hydration force explains an extreme slowdown of water transport and successfully predicts a strong nonlinear elasticity and a transition in mechanical properties that differs from glassy and poroelastic behaviours. These results indicate that water not only endows biological matter with fluidity but also can-through the hydration force-control macroscopic properties and give rise to a 'hydration solid' with unusual properties. A large fraction of biological matter could belong to this distinct class of solid matter., (© 2023. The Author(s), under exclusive licence to Springer Nature Limited.)- Published
- 2023
- Full Text
- View/download PDF
29. Diagnostic capacities and treatment practices on implantation mycoses: Results from the 2022 WHO global online survey.
- Author
-
Milani B, Dagne DA, Choi HL, Schito M, and Stone HA
- Subjects
- Humans, World Health Organization, Surveys and Questionnaires, Mycoses diagnosis, Mycoses drug therapy, Mycoses epidemiology, Sporotrichosis drug therapy, Mycetoma drug therapy
- Abstract
Between January and March 2022, WHO conducted a global online survey to collect data on diagnostic capacities and treatment practices in different settings for four implantation mycoses: eumycetoma, actinomycetoma, cutaneous sporotrichosis and chromoblastomycosis. The survey investigated the type of diagnostic methods available in countries at various health system levels (tertiary, secondary, primary level) and the medicines used to treat implantation mycoses, with a view to understanding the level of drug repurposing for treatment of these diseases. 142 respondents from 47 countries, including all continents, contributed data: 60% were from middle-income countries, with 59% working at the tertiary level of the health system and 30% at the secondary level. The results presented in this article provide information on the current diagnostic capacity and treatment trends for both pharmacological and non-pharmacological interventions. In addition, the survey provides insight on refractory case rates, as well as other challenges, such as availability and affordability of medicines, especially in middle-income countries. Although the study has limitations, the survey-collected data confirms that drug repurposing is occurring for all four surveyed implantation mycoses. The implementation of an openly accessible global and/or a national treatment registry for implantation mycoses could contribute to address the gaps in epidemiological information and collect valuable observational data to inform treatment guidelines and clinical research., Competing Interests: The authors have declared that no competing interests exist., (Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.)
- Published
- 2023
- Full Text
- View/download PDF
30. Acentrosomal spindles assemble from branching microtubule nucleation near chromosomes in Xenopus laevis egg extract.
- Author
-
Gouveia B, Setru SU, King MR, Hamlin A, Stone HA, Shaevitz JW, and Petry S
- Subjects
- Animals, Xenopus laevis, Centrosome, Chromatin, Chromosomes, Spindle Apparatus, Microtubules
- Abstract
Microtubules are generated at centrosomes, chromosomes, and within spindles during cell division. Whereas microtubule nucleation at the centrosome is well characterized, much remains unknown about where, when, and how microtubules are nucleated at chromosomes. To address these questions, we reconstitute microtubule nucleation from purified chromosomes in meiotic Xenopus egg extract and find that chromosomes alone can form spindles. We visualize microtubule nucleation near chromosomes using total internal reflection fluorescence microscopy to find that this occurs through branching microtubule nucleation. By inhibiting molecular motors, we find that the organization of the resultant polar branched networks is consistent with a theoretical model where the effectors for branching nucleation are released by chromosomes, forming a concentration gradient that spatially biases branching microtbule nucleation. In the presence of motors, these branched networks are ultimately organized into functional spindles, where the number of emergent spindle poles scales with the number of chromosomes and total chromatin area., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
31. Exploring the dynamics of vascular adaptation.
- Author
-
Shimizu TS, Kiers ET, and Stone HA
- Subjects
- Adaptation, Physiological, Acclimatization, Veins, Cardiovascular System
- Abstract
A combination of in toto imaging and theory suggests a new mechanism for the remodeling of veins in vascular networks., Competing Interests: TS, EK, HS No competing interests declared, (© 2023, Shimizu et al.)
- Published
- 2023
- Full Text
- View/download PDF
32. Flows of a nonequilibrated aqueous two-phase system in a microchannel.
- Author
-
Abbasi N, Nunes JK, Pan Z, Dethe T, Shum HC, Košmrlj A, and Stone HA
- Abstract
Liquid-liquid phase separation is a rich and dynamic process, which recently has gained new interest, especially in biology and for material synthesis. In this work, we experimentally show that co-flow of a nonequilibrated aqueous two-phase system within a planar flow-focusing microfluidic device results in a three-dimensional flow, as the two nonequilibrated solutions move downstream along the length of the microchannel. After the system reaches steady-state, invasion fronts from the outer stream are formed along the top and bottom walls of the microfluidic device. The invasion fronts advance towards the center of the channel, until they merge. We first show by tuning the concentration of polymer species within the system that the formation of these fronts is due to liquid-liquid phase separation. Moreover, the rate of invasion from the outer stream increases with increasing polymer concentrations in the streams. We hypothesize the invasion front formation and growth is driven by Marangoni flow induced by the polymer concentration gradient along the width of the channel, as the system is undergoing phase separation. In addition, we show how at various downstream positions the system reaches its steady-state configuration once the two fluid streams flow side-by-side in the channel.
- Published
- 2023
- Full Text
- View/download PDF
33. Fibro-Gel: An All-Aqueous Hydrogel Consisting of Microfibers with Tunable Release Profile and its Application in Wound Healing.
- Author
-
Shen Y, Liu Y, Nunes JK, Wang C, Xu M, To MKT, Stone HA, and Shum HC
- Subjects
- Mice, Animals, Skin, Tissue Scaffolds chemistry, Water, Hydrogels chemistry, Wound Healing
- Abstract
Injectable hydrogels are valuable tools in tissue engineering and regenerative medicine due to their unique advantages of injectability with minimal invasiveness and usability for irregularly shaped sites. However, it remains challenging to achieve scalable manufacturing together with matching physicochemical properties and on-demand drug release for a high level of control over biophysical and biomedical cues to direct endogenous cells. Here, the use of an injectable fibro-gel is demonstrated, a water-filled network of entangled hydrogel microfibers, whose physicochemical properties and drug release profiles can be tailored to overcome these shortcomings. This fibro-gel exhibits favorable in vitro biocompatibility and the capability to aid vascularization. The potential use of the fibro-gel for advancing tissue regeneration is explored with a mice excision skin model. Preliminary in vivo tests indicate that the fibro-gel promotes wound healing and new healthy tissue regeneration at a faster rate than a commercial gel. Moreover, it is demonstrated that the release of distinct drugs at different rates can further accelerate wound healing with higher efficiency, by using a two-layer fibro-gel model. The combination of injectability and tailorable properties of this fibro-gel offers a promising approach in biomedical fields such as therapeutic delivery, medical dressings, and 3D tissue scaffolds for tissue engineering., (© 2023 The Authors. Advanced Materials published by Wiley-VCH GmbH.)
- Published
- 2023
- Full Text
- View/download PDF
34. Transport of a passive scalar in wide channels with surface topography: An asymptotic theory.
- Author
-
Roggeveen JV, Stone HA, and Kurzthaler C
- Abstract
We generalize classical dispersion theory for a passive scalar to derive an asymptotic long-time convection-diffusion equation for a solute suspended in a wide, structured channel and subject to a steady low-Reynolds-number shear flow. Our asymptotic theory relies on a domain perturbation approach for small roughness amplitudes of the channel and holds for general surface shapes expandable as a Fourier series. We determine an anisotropic dispersion tensor, which depends on the characteristic wavelengths and amplitude of the surface structure. For surfaces whose corrugations are tilted with respect to the applied flow direction, we find that dispersion along the principal direction (i.e. the principal eigenvector of the dispersion tensor) is at an angle to the main flow direction and becomes enhanced relative to classical Taylor dispersion. In contrast, dispersion perpendicular to it can decrease compared to the short-time diffusivity of the particles. Furthermore, for an arbitrary surface shape represented in terms of a Fourier decomposition, we find that each Fourier mode contributes at leading order a linearly-independent correction to the classical Taylor dispersion diffusion tensor., (Creative Commons Attribution license.)
- Published
- 2023
- Full Text
- View/download PDF
35. Controlling extrudate volume fraction through poroelastic extrusion of entangled looped fibers.
- Author
-
Pan Z, Nunes JK, Duprat C, Shum HC, and Stone HA
- Abstract
When a suspension of spherical or near-spherical particles passes through a constriction the particle volume fraction either remains the same or decreases. In contrast to these particulate suspensions, here we observe that an entangled fiber suspension increases its volume fraction up to 14-fold after passing through a constriction. We attribute this response to the entanglements among the fibers that allows the network to move faster than the liquid. By changing the fiber geometry, we find that the entanglements originate from interlocking shapes or high fiber flexibility. A quantitative poroelastic model is used to explain the increase in velocity and extrudate volume fraction. These results provide a new strategy to use fiber volume fraction, flexibility, and shape to tune soft material properties, e.g., suspension concentration and porosity, during delivery, as occurs in healthcare, three-dimensional printing, and material repair., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
36. Oil-on-water droplets faceted and stabilized by vortex halos in the subphase.
- Author
-
Li Y, Pahlavan AA, Chen Y, Liu S, Li Y, Stone HA, and Granick S
- Subjects
- Surface Tension, Thermodynamics, Water, Convection
- Abstract
For almost 200 y, the dominant approach to understand oil-on-water droplet shape and stability has been the thermodynamic expectation of minimized energy, yet parallel literature shows the prominence of Marangoni flow, an adaptive gradient of interfacial tension that produces convection rolls in the water. Our experiments, scaling arguments, and linear stability analysis show that the resulting Marangoni-driven high-Reynolds-number flow in shallow water overcomes radial symmetry of droplet shape otherwise enforced by the Laplace pressure. As a consequence, oil-on-water droplets are sheared to become polygons with distinct edges and corners. Moreover, subphase flows beneath individual droplets can inhibit the coalescence of adjacent droplets, leading to rich many-body dynamics that makes them look alive. The phenomenon of a "vortex halo" in the liquid subphase emerges as a hidden variable.
- Published
- 2023
- Full Text
- View/download PDF
37. Dynamics of Droplet Pinch-Off at Emulsified Oil-Water Interfaces: Interplay between Interfacial Viscoelasticity and Capillary Forces.
- Author
-
Bazazi P, Stone HA, and Hejazi SH
- Abstract
The presence of submicrometer structures at liquid-fluid interfaces modifies the properties of many science and technological systems by lowering the interfacial tension, creating tangential Marangoni stresses, and/or inducing surface viscoelasticity. Here we experimentally study the break-up of a liquid filament of a silica nanoparticle dispersion in a background oil phase that contains surfactant assemblies. Although self-similar power-law pinch-off is well documented for threads of Newtonian fluids, we report that when a viscoelastic layer is formed in situ at the interface, the pinch-off dynamics follows an exponential decay. Recently, such exponential neck thinning was found theoretically when surface viscous effects were taken into account. We introduce a simple approach to calculate the effective relaxation time of viscoelastic interfaces and estimate the thickness of the interfacial layer and the viscoelastic properties of liquid-fluid interfaces, where the direct measurement of interfacial rheology is not possible.
- Published
- 2023
- Full Text
- View/download PDF
38. Sliding droplets as the chemical version for identifying the number and type of needles in a haystack.
- Author
-
Stone HA
- Published
- 2022
- Full Text
- View/download PDF
39. Three-Dimensional Self-Similarity of Coalescing Viscous Drops in the Thin-Film Regime.
- Author
-
Kaneelil PR, Pahlavan AA, Xue N, and Stone HA
- Abstract
Coalescence and breakup of drops are classic problems in fluid physics that often involve self-similarity and singularity formation. While the coalescence of suspended drops is axisymmetric, the coalescence of drops on a substrate is inherently three-dimensional. Yet, studies so far have only considered this problem in two dimensions. In this Letter, we use interferometry to reveal the three-dimensional shape of the interface as two drops coalescence on a substrate. We unify the known scaling laws in this problem within the thin-film approximation and find a three-dimensional self-similarity that enables us to describe the anisotropic shape of the dynamic interface with a universal curve.
- Published
- 2022
- Full Text
- View/download PDF
40. Capillary forces generated by biomolecular condensates.
- Author
-
Gouveia B, Kim Y, Shaevitz JW, Petry S, Stone HA, and Brangwynne CP
- Subjects
- Cell Biology, Phase Transition, Biomolecular Condensates chemistry
- Abstract
Liquid-liquid phase separation and related phase transitions have emerged as generic mechanisms in living cells for the formation of membraneless compartments or biomolecular condensates. The surface between two immiscible phases has an interfacial tension, generating capillary forces that can perform work on the surrounding environment. Here we present the physical principles of capillarity, including examples of how capillary forces structure multiphase condensates and remodel biological substrates. As with other mechanisms of intracellular force generation, for example, molecular motors, capillary forces can influence biological processes. Identifying the biomolecular determinants of condensate capillarity represents an exciting frontier, bridging soft matter physics and cell biology., (© 2022. Springer Nature Limited.)
- Published
- 2022
- Full Text
- View/download PDF
41. Hydrodynamically induced helical particle drift due to patterned surfaces.
- Author
-
Chase DL, Kurzthaler C, and Stone HA
- Abstract
Advances in microfabrication enable the tailoring of surfaces to achieve optimal sorting, mixing, and focusing of complex particulate suspensions in microfluidic devices. Corrugated surfaces have proved to be a powerful tool to manipulate particle motion for a variety of applications, yet the fundamental physical mechanism underlying the hydrodynamic coupling of the suspended particles and surface topography has remained elusive. Here, we study the hydrodynamic interactions between sedimenting spherical particles and nearby corrugated surfaces, whose corrugations are tilted with respect to gravity. Our experiments show three-dimensional, helical particle trajectories with an overall drift along the corrugations, which agree quantitatively with our analytical perturbation theory. The theoretical predictions reveal that the interaction of the disturbance flows, induced by the particle motion, with the corrugations generates locally a transverse anisotropy of the pressure field, which explains the helical dynamics and particle drift. We demonstrate that this dynamical behavior is generic for various surface shapes, including rectangular, sinusoidal, and triangular corrugations, and we identify surface characteristics that produce an optimal particle drift. Our findings reveal a universal feature inherent to particle transport near patterned surfaces and provide fundamental insights for future microfluidic applications that aim to enhance the focusing or sorting of particulate suspensions.
- Published
- 2022
- Full Text
- View/download PDF
42. Spongy all-in-liquid materials by in-situ formation of emulsions at oil-water interfaces.
- Author
-
Bazazi P, Stone HA, and Hejazi SH
- Subjects
- Emulsions chemistry, Ink, Water chemistry, Nanoparticles chemistry, Silicon Dioxide
- Abstract
Printing a structured network of functionalized droplets in a liquid medium enables engineering collectives of living cells for functional purposes and promises enormous applications in processes ranging from energy storage to tissue engineering. Current approaches are limited to drop-by-drop printing or face limitations in reproducing the sophisticated internal features of a structured material and its interactions with the surrounding media. Here, we report a simple approach for creating stable liquid filaments of silica nanoparticle dispersions and use them as inks to print all-in-liquid materials that consist of a network of droplets. Silica nanoparticles stabilize liquid filaments at Weber numbers two orders of magnitude smaller than previously reported in liquid-liquid systems by rapidly producing a concentrated emulsion zone at the oil-water interface. We experimentally demonstrate the printed aqueous phase is emulsified in-situ; consequently, a 3D structure is achieved with flexible walls consisting of layered emulsions. The tube-like printed features have a spongy texture resembling miniaturized versions of "tube sponges" found in the oceans. A scaling analysis based on the interplay between hydrodynamics and emulsification kinetics reveals that filaments are formed when emulsions are generated and remain at the interface during the printing period. Stabilized filaments are utilized for printing liquid-based fluidic channels., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
43. The effects of surface hydration on capillary adhesion under nanoscale confinement.
- Author
-
Huang S, Colosqui CE, Young YN, and Stone HA
- Abstract
Nanoscale phenomena such as surface hydration and the molecular layering of liquids under strong nanoscale confinement play a critical role in liquid-mediated surface adhesion that is not accounted for by available models, which assume a uniform liquid density with or without considering surface forces and associated disjoining pressure effects. This work introduces an alternative theoretical description that via the potential of mean force (PMF) considers the strong spatial variation of the liquid number density under nanoscale confinement. This alternative description based on the PMF predicts a dual effect of surface hydration by producing: (i) strong spatial oscillations of the local liquid density and pressure and, more importantly, (ii) a configuration-dependent liquid-solid surface energy under nanoscale confinement. Theoretical analysis and molecular dynamics simulations for the case of an axisymmetric water bridge with nanoscale heights show that the latter hydration effect is critical for the accurate prediction of the surface energy and adhesion forces when a small volume of liquid is nanoscopically confined by two surfaces approaching contact.
- Published
- 2022
- Full Text
- View/download PDF
44. Solutal-buoyancy-driven intertwining and rotation of patterned elastic sheets.
- Author
-
Manna RK, Shklyaev OE, Stone HA, and Balazs AC
- Abstract
The intertwining of strands into 3D spirals is ubiquitous in biology, enabling functions from information storage to maintenance of cell structure and directed locomotion. In synthetic systems, entwined fibers can provide superior mechanical properties and act as artificial muscle or structural reinforcements. Unlike structures in nature, the entwinement of synthetic materials typically requires application of an external stimulus, such as mechanical actuation, light, or a magnetic field. Herein, we use computational modeling to design microscale sheets that mimic biology by transducing chemical energy into mechanical action, and thereby self-organize and interlink into 3D spirals, which spontaneously rotate. These flexible sheets are immersed in a fluid-filled microchamber that encompasses an immobilized patch of catalysts on the bottom wall. The sheets themselves can be passive or active (coated with catalyst). Catalytic reactions in the solution generate products that occupy different volumes than the reactants. The resulting density variations exert a force on the fluid (solutal buoyancy force) that causes motion, which in turn drives the interlinking and collective swirling of the sheets. The individual sheets do not rotate; rotation only occurs when the sheets are interlinked. This level of autonomous, coordinated 3D structural organization, intertwining, and rotation is unexpected in synthetic materials systems operating without external controls. Using physical arguments, we identify dimensionless ratios that are useful in scaling these ideas to other systems. These findings are valuable for creating materials that act as "machines", and directing soft matter to undergo self-sustained, multistep assembly that is governed by intrinsic chemical reactions., (© The Author(s) 2022. Published by Oxford University Press on behalf of the National Academy of Sciences.)
- Published
- 2022
- Full Text
- View/download PDF
45. Introduction: Microfluidics.
- Author
-
Nunes JK and Stone HA
- Subjects
- Microfluidics
- Published
- 2022
- Full Text
- View/download PDF
46. From dynamic self-organization to avalanching instabilities in soft-granular threads.
- Author
-
Guzowski J, Buda RJ, Costantini M, Ćwiklińska M, Garstecki P, and Stone HA
- Abstract
We study the dynamics of threads of monodisperse droplets, including droplet chains and multi-chains, in which the droplets are interconnected by capillary bridges of another immiscible liquid phase. This system represents wet soft-granular matter - a class of granular materials in which the grains are soft and wetted by thin fluid films-with other examples including wet granular hydrogels or foams. In contrast to wet granular matter with rigid grains ( e.g. , wet sand), studied previously, the deformability of the grains raises the number of available metastable states and facilitates rearrangements which allow for reorganization and self-assembly of the system under external drive, e.g. , applied via viscous forces. We use a co-flow configuration to generate a variety of unique low-dimensional regular granular patterns, intermediate between 1D and 2D, ranging from linear chains and chains with periodically occurring folds to multi-chains and segmented structures including chains of finite length. In particular, we observe that the partially folded chains self-organize via limit cycle of displacements and rearrangements occurring at a frequency self-adapted to the rate of build-up of compressive strain in the chain induced by the viscous forces. Upon weakening of the capillary arrest of the droplets, we observe spontaneous fluidization of the quasi-solid structures and avalanches of rearrangements. We identify two types of fluidization-induced instabilities and rationalize them in terms of a competition between advection and propagation. While we use aqueous droplets as the grains we demonstrate that the reported mechanisms of adaptive self-assembly apply to other types of soft granular systems including foams and microgels. We discuss possible application of the reported quasi-1D compartmentalized structures in tissue engineering, bioprinting and materials science.
- Published
- 2022
- Full Text
- View/download PDF
47. Shear-induced migration of confined flexible fibers.
- Author
-
Xue N, Nunes JK, and Stone HA
- Abstract
We report an experimental study of the shear-induced migration of flexible fibers in suspensions confined between two parallel plates. Non-Brownian fiber suspensions are imaged in a rheo-microscopy setup, where the top and the bottom plates counter-rotate and create a Couette flow. Initially, the fibers are near the bottom plate due to sedimentation. Under shear, the fibers move with the flow and migrate towards the center plane between the two walls. Statistical properties of the fibers, such as the mean values of the positions, orientations, and end-to-end lengths of the fibers, are used to characterize the behaviors of the fibers. A dimensionless parameter Λ
eff , which compares the hydrodynamic shear stress and the fiber stiffness, is used to analyze the effective flexibility of the fibers. The observations show that the fibers that are more likely to bend exhibit faster migration. As Λeff increases (softer fibers and stronger shear stresses), the fibers tend to align in the flow direction and the motions of the fibers transition from tumbling and rolling to bending. The bending fibers drift away from the walls to the center plane. Further increasing Λeff leads to more coiled fiber shapes, and the bending is more frequent and with larger magnitudes, which leads to more rapid migration towards the center. Different behaviors of the fibers are quantified with Λeff , and the structures and the dynamics of the fibers are correlated with the migration.- Published
- 2022
- Full Text
- View/download PDF
48. The effect of rigid cells on blood viscosity: linking rheology and sickle cell anemia.
- Author
-
Perazzo A, Peng Z, Young YN, Feng Z, Wood DK, Higgins JM, and Stone HA
- Subjects
- Erythrocytes, Humans, Rheology, Viscosity, Anemia, Sickle Cell, Blood Viscosity
- Abstract
Sickle cell anemia (SCA) is a disease that affects red blood cells (RBCs). Healthy RBCs are highly deformable objects that under flow can penetrate blood capillaries smaller than their typical size. In SCA there is an impaired deformability of some cells, which are much stiffer and with a different shape than healthy cells, and thereby affect regular blood flow. It is known that blood from patients with SCA has a higher viscosity than normal blood. However, it is unclear how the rigidity of cells is related to the viscosity of blood, in part because SCA patients are often treated with transfusions of variable amounts of normal RBCs and only a fraction of cells will be stiff. Here, we report systematic experimental measurements of the viscosity of a suspension varying the fraction of rigid particles within a suspension of healthy cells. We also perform systematic numerical simulations of a similar mixed suspension of soft RBCs, rigid particles, and their hydrodynamic interactions. Our results show that there is a rheological signature within blood viscosity to clearly identify the fraction of rigidified cells among healthy deformable cells down to a 5% volume fraction of rigidified cells. Although aggregation of RBCs is known to affect blood rheology at low shear rates, and our simulations mimic this effect via an adhesion potential, we show that such adhesion, or aggregation, is unlikely to provide a physical rationalization for the viscosity increase observed in the experiments at moderate shear rates due to rigidified cells. Through numerical simulations, we also highlight that most of the viscosity increase of the suspension is due to the rigidity of the particles rather than their sickled or spherical shape. Our results are relevant to better characterize SCA, provide useful insights relevant to rheological consequences of blood transfusions, and, more generally, extend to the rheology of mixed suspensions having particles with different rigidities, as well as offering possibilities for developments in the field of soft material composites.
- Published
- 2022
- Full Text
- View/download PDF
49. A geometric criterion for the optimal spreading of active polymers in porous media.
- Author
-
Kurzthaler C, Mandal S, Bhattacharjee T, Löwen H, Datta SS, and Stone HA
- Abstract
Efficient navigation through disordered, porous environments poses a major challenge for swimming microorganisms and future synthetic cargo-carriers. We perform Brownian dynamics simulations of active stiff polymers undergoing run-reverse dynamics, and so mimic bacterial swimming, in porous media. In accord with experiments of Escherichia coli, the polymer dynamics are characterized by trapping phases interrupted by directed hopping motion through the pores. Our findings show that the spreading of active agents in porous media can be optimized by tuning their run lengths, which we rationalize using a coarse-grained model. More significantly, we discover a geometric criterion for the optimal spreading, which emerges when their run lengths are comparable to the longest straight path available in the porous medium. Our criterion unifies results for porous media with disparate pore sizes and shapes and for run-and-tumble polymers. It thus provides a fundamental principle for optimal transport of active agents in densely-packed biological and environmental settings., (© 2021. The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
50. Metal-catalyst-free gas-phase synthesis of long-chain hydrocarbons.
- Author
-
Martínez L, Merino P, Santoro G, Martínez JI, Katsanoulis S, Ault J, Mayoral Á, Vázquez L, Accolla M, Dazzi A, Mathurin J, Borondics F, Blázquez-Blázquez E, Shauloff N, Lebrón-Aguilar R, Quintanilla-López JE, Jelinek R, Cernicharo J, Stone HA, de la Peña O'Shea VA, de Andres PL, Haller G, Ellis GJ, and Martín-Gago JA
- Abstract
Development of sustainable processes for hydrocarbons synthesis is a fundamental challenge in chemistry since these are of unquestionable importance for the production of many essential synthetic chemicals, materials and carbon-based fuels. Current industrial processes rely on non-abundant metal catalysts, temperatures of hundreds of Celsius and pressures of tens of bars. We propose an alternative gas phase process under mild reaction conditions using only atomic carbon, molecular hydrogen and an inert carrier gas. We demonstrate that the presence of CH
2 and H radicals leads to efficient C-C chain growth, producing micron-length fibres of unbranched alkanes with an average length distribution between C23 -C33 . Ab-initio calculations uncover a thermodynamically favourable methylene coupling process on the surface of carbonaceous nanoparticles, which is kinematically facilitated by a trap-and-release mechanism of the reactants and nanoparticles that is confirmed by a steady incompressible flow simulation. This work could lead to future alternative sustainable synthetic routes to critical alkane-based chemicals or fuels., (© 2021. The Author(s).)- Published
- 2021
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.