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We develop and experimentally demonstrate a methodology for a full molecular frame quantum tomography (MFQT) of dynamical polyatomic systems. We exemplify this approach through the complete characterization of an electronically non-adiabatic wavepacket in ammonia (NH$_3$). The method exploits both energy and time-domain spectroscopic data, and yields the lab frame density matrix (LFDM) for the system, the elements of which are populations and coherences. The LFDM fully characterizes electronic and nuclear dynamics in the molecular frame, yielding the time- and orientation-angle dependent expectation values of any relevant operator. For example, the time-dependent molecular frame electronic probability density may be constructed, yielding information on electronic dynamics in the molecular frame. In NH$_3$, we observe that electronic coherences are induced by nuclear dynamics which non-adiabatically drive electronic motions (charge migration) in the molecular frame. Here, the nuclear dynamics are rotational and it is non-adiabatic Coriolis coupling which drives the coherences. Interestingly, the nuclear-driven electronic coherence is preserved over longer time scales. In general, MFQT can help quantify entanglement between electronic and nuclear degrees of freedom, and provide new routes to the study of ultrafast molecular dynamics, charge migration, quantum information processing, and optimal control schemes.

Hyperspectral stimulated Raman scattering (SRS) microscopy is a label-free technique for biomedical and mineralogical imaging which can suffer from low signal to noise ratios. Here we demonstrate the use of an unsupervised deep learning neural network for rapid and automatic denoising of SRS images: UHRED (Unsupervised Hyperspectral Resolution Enhancement and Denoising). UHRED is capable of one-shot learning; only one hyperspectral image is needed, with no requirements for training on previously labelled datasets or images. Furthermore, by applying a k-means clustering algorithm to the processed data, we demonstrate automatic, unsupervised image segmentation, yielding, without prior knowledge of the sample, intuitive chemical species maps, as shown here for a lithium ore sample.

The application of a matrix-based reconstruction protocol for obtaining Molecular Frame (MF) photoelectron angular distributions (MFPADs) from laboratory frame (LF) measurements (LFPADs) is explored. Similarly to other recent works on the topic of MF reconstruction, this protocol makes use of time-resolved LF measurements, in which a rotational wavepacket is prepared and probed via photoionization, followed by a numerical reconstruction routine; however, in contrast to other methodologies, the protocol developed herein does not require determination of photoionization matrix elements, and consequently takes a relatively simple numerical form (matrix transform making use of the Moore-Penrose inverse). Significantly, the simplicity allows application of the method to the successful reconstruction of MFPADs for polyatomic molecules. The scheme is demonstrated numerically for two realistic cases, $N_2$ and $C_2H_4$. The new technique is expected to be generally applicable for a range of MF reconstruction problems involving photoionization of polyatomic molecules.

The direct observation of non-adiabatic dynamics at conical intersections is a long-standing goal of molecular physics. Novel time-resolved spectroscopies have been proposed which are sensitive to electronic coherences induced by the passage of an excited state wavepacket through a region of conical intersection. Here we demonstrate that inclusion of the geometric phase effect, and its manifestations, is essential for the correct description of the transient electronic coherences that may or may not develop. For electronic states of different symmetry, electronic coherences are suppressed by the geometric phase. Conversely, for states of the same symmetry, appreciable electronic coherences are possible, but their magnitude depends on both the topography of and direction of approach to the conical intersection. These general results have consequences for all studies of electronic coherences at conical intersections., Comment: 7 pages, 3 figures

Ongoing developments in ultrafast X-ray sources offer powerful new means of probing the com- plex non-adiabatically coupled structural and electronic dynamics of photoexcited molecules. These non-Born-Oppenheimer effects are governed by general electronic degeneracies termed conical in- tersections which play a key role, analogous to that of a transition state, in the electronic-nuclear dynamics of excited molecules. Using high level ab initio quantum dynamics simulations, we studied time-resolved X-ray absorption and photoelectron spectroscopy (TRXAS and TRXPS, respectively) of the prototypical unsaturated organic chromophore, ethylene, following excitation to its S2 state. The TRXAS in particular is highly sensitive to all aspects of the ensuing dynamics. These X-ray spectroscopies provide a clear signature of the wavepacket dynamics near conical intersections, related to charge localization effects driven by the nuclear dynamics. Given the ubiquity of charge localization in excited state dynamics, we believe that ultrafast X-ray spectroscopies offer a unique and powerful route to the direct observation of dynamics around conical intersections., Comment: 5 pages, 4 figures

Time-resolved pump-probe measurements of Xe, pumped at 133~nm and probed at 266~nm, are presented. The pump pulse prepared a long-lived hyperfine wavepacket, in the Xe $5p^5(^2P^{\circ}_{1/2})6s~^2[1/2]^{\circ}_1$ manifold ($E=$77185 cm$^{-1}=$9.57 eV). The wavepacket was monitored via single-photon ionization, and photoelectron images measured. The images provide angle- and time-resolved data which, when obtained over a large time-window (900~ps), constitute a precision quantum beat spectroscopy measurement of the hyperfine state splittings. Additionally, analysis of the full photoelectron image stack provides a quantum beat imaging modality, in which the Fourier components of the photoelectron images correlated with specific beat components can be obtained. This may also permit the extraction of isotope-resolved photoelectron images in the frequency domain, in cases where nuclear spins (hence beat components) can be uniquely assigned to specific isotopes (as herein), and also provides phase information. The information content of both raw, and inverted, image stacks is investigated, suggesting the utility of the Fourier analysis methodology in cases where images cannot be inverted.

The Pixel-Imaging Mass Spectrometry (PImMS) camera allows for 3D charged particle imaging measurements, in which the particle time-of-flight is recorded along with $(x,y)$ position. Coupling the PImMS camera to an ultrafast pump-probe velocity-map imaging spectroscopy apparatus therefore provides a route to time-resolved multi-mass ion imaging, with both high count rates and large dynamic range, thus allowing for rapid measurements of complex photofragmentation dynamics. Furthermore, the use of vacuum ultraviolet wavelengths for the probe pulse allows for an enhanced observation window for the study of excited state molecular dynamics in small polyatomic molecules having relatively high ionization potentials. Herein, preliminary time-resolved multi-mass imaging results from C$_2$F$_3$I photolysis are presented. The experiments utilized femtosecond UV and VUV (160.8~nm and 267~nm) pump and probe laser pulses in order to demonstrate and explore this new time-resolved experimental ion imaging configuration. The data indicates the depth and power of this measurement modality, with a range of photofragments readily observed, and many indications of complex underlying wavepacket dynamics on the excited state(s) prepared.

Photoionization of molecular species is, essentially, a multi-path interferometer with both experimentally controllable and intrinsic molecular characteristics. In this work, XUV photoionization of impulsively aligned molecular targets ($N_2$) is used to provide a time-domain route to "complete" photoionization experiments, in which the rotational wavepacket controls the geometric part of the photoionization interferometer. The data obtained is sufficient to determine the magnitudes and phases of the ionization matrix elements for all observed channels, and to reconstruct molecular frame interferograms from lab frame measurements. In principle this methodology provides a time-domain route to complete photoionization experiments, and the molecular frame, which is generally applicable to any molecule (no prerequisites), for all energies and ionization channels., Comment: Supplementary materials, including data, available at DOI: 10.6084/m9.figshare.4480349 (https://dx.doi.org/10.6084/m9.figshare.4480349)

This review article discusses advances in the use of time-resolved photoelectron spectroscopy for the study of non-adiabatic processes in molecules. A theoretical treatment of the experiments is presented together with a number of experimental examples., Comment: 84 pages, 33 figures

Time-resolved coincidence imaging of photoelectrons and photoions represents the most complete experimental measurement of ultrafast excited state dynamics, a multi-dimensional measurement for a multi-dimensional problem. Here we present the experimental data from recent coincidence imaging experiments, undertaken with the aim of gaining insight into the complex ultrafast excited-state dynamics of 1,3-butadiene initiated by absorption of 200 nm light. We discuss photoion and photoelectron mappings of increasing dimensionality, and focus particularly on the time-resolved photoelectron angular distributions (TRPADs), expected to be a sensitive probe of the electronic evolution of the excited state and to provide significant information beyond the time-resolved photoelectron spectrum (TRPES). Complex temporal behaviour is observed in the TRPADs, revealing their sensitivity to the dynamics while also emphasising the difficulty of interpretation of these complex observables. From the experimental data some details of the wavepacket dynamics are discerned relatively directly, and we make some tentative comparisons with existing ab initio calculations in order to gain deeper insight into the experimental measurements; finally, we sketch out some considerations for taking this comparison further in order to bridge the gap between experiment and theory., Comment: 18 pages, 10 figures. Pre-print of JMO submission

We propose a method to reconstruct the vibrational quantum state of molecules excited by a general excitation laser pulse. Unlike existing methods, we do not require the molecules before excitation to be in a pure state, allowing us to treat the important case of initially thermally excited molecules. Even if only a single initial level is appreciably populated, initial levels with small populations can still give major contributions to the unknown vibrational state, making it essential to take them into account. In addition to the excitation pulse, the method uses two incident, short laser pulses in a non-co-linear geometry to create four-wave mixing in the molecules. The measurements used in the reconstruction are spectra of the outgoing four-wave mixing pulse at different time delays of the excitation laser pulse. An important point is that the method does not require detailed knowledge of molecular transition moments between excited states nor of any of the incoming laser pulses, but circumvents this requirement by using one or more calibration laser pulses in a separate experiment either before or after the main data are recorded. The only requirements for the calibration laser pulses are that the constant parts of their spectrums should together cover the spectral range of the excitation laser pulse, and the constant part of each should have sufficient spectral overlap with one other calibration pulse to populate two of the same levels. Finally, we discuss the extension of the reconstruction method in this paper to more general situations, hereby presenting the new idea of quantum state reconstruction through perturbations with calibration., Comment: 12 pages, 5 figures