603 results on '"Stoesser, Nicole"'
Search Results
2. Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire
3. Improving the representativeness of UK’s national COVID-19 Infection Survey through spatio-temporal regression and post-stratification
4. Author Correction: The plasmidome associated with Gram-negative bloodstream infections: a large-scale observational study using complete plasmid assemblies
5. SARS-CoV-2, influenza A/B and respiratory syncytial virus positivity and association with influenza-like illness and self-reported symptoms, over the 2022/23 winter season in the UK: a longitudinal surveillance cohort
6. The plasmidome associated with Gram-negative bloodstream infections: A large-scale observational study using complete plasmid assemblies
7. Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population
8. Exploring uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli: an observational analysis
9. Dissemination and persistence of antimicrobial resistance (AMR) along the wastewater-river continuum
10. Global burden of bacterial antimicrobial resistance 1990–2021: a systematic analysis with forecasts to 2050
11. Nanopore sequencing of influenza A and B in Oxfordshire and the United Kingdom, 2022–23
12. Model-based evaluation of admission screening strategies for the detection and control of carbapenemase-producing Enterobacterales in the English hospital setting
13. Deep learning and single-cell phenotyping for rapid antimicrobial susceptibility detection in Escherichia coli
14. Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK
15. Factors associated with plasmid antibiotic resistance gene carriage revealed using large-scale multivariable analysis
16. Antibody responses and correlates of protection in the general population after two doses of the ChAdOx1 or BNT162b2 vaccines
17. SARS-CoV-2 antibody trajectories after a single COVID-19 vaccination with and without prior infection
18. Molecular epidemiology and antimicrobial resistance phenotype of paediatric bloodstream infections caused by Gram-negative bacteria
19. Whole genome sequencing reveals hidden transmission of carbapenemase-producing Enterobacterales
20. Rapid identification of bacterial isolates using microfluidic adaptive channels and multiplexed fluorescence microscopy.
21. Effect of Delta variant on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK
22. Detecting changes in population trends in infection surveillance using community SARS-CoV-2 prevalence as an exemplar
23. Evaluation of the accuracy of bacterial genome reconstruction with Oxford Nanopore R10.4.1 long-read-only sequencing
24. COVID-19: Rapid antigen detection for SARS-CoV-2 by lateral flow assay: A national systematic evaluation of sensitivity and specificity for mass-testing
25. Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study across Cambodia, Kenya, and the UK
26. Impact of vaccination on new SARS-CoV-2 infections in the United Kingdom
27. Community prevalence of SARS-CoV-2 in England from April to November, 2020: results from the ONS Coronavirus Infection Survey
28. Identifying lineage effects when controlling for population structure improves power in bacterial association studies
29. Performance characteristics of five immunoassays for SARS-CoV-2: a head-to-head benchmark comparison
30. Global genomic epidemiology ofblaGES-5carbapenemase-associated integrons
31. Comparison of direct cDNA and PCR-cDNA Nanopore sequencing ofEscherichia coliisolates
32. Antimicrobial Usage Among Acutely Ill Hospitalised Children Aged 2-23 Months in Sub-Saharan Africa and South Asia
33. Epidemiology and microbiology of recurrent UTI in women in the community in Oxfordshire, UK
34. Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli
35. Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire
36. A new variant of the colistin resistance gene MCR-1 with co-resistance to β-lactam antibiotics reveals a potential novel antimicrobial peptide
37. Infection Inspection: Using the power of citizen science to help with image-based prediction of antibiotic resistance inEscherichia coli
38. Stringent thresholds in SARS-CoV-2 IgG assays lead to under-detection of mild infections
39. Viral detection and identification in 20 min by rapid single-particle fluorescence in-situ hybridization of viral RNA
40. Antimicrobial resistance in commensal opportunistic pathogens isolated from non-sterile sites can be an effective proxy for surveillance in bloodstream infections
41. A haemagglutination test for rapid detection of antibodies to SARS-CoV-2
42. Ten-year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK
43. Applications of whole genome sequencing to understanding the mechanisms, evolution and transmission of antibiotic resistance in Escherichia coli and Klebsiella pneumonia
44. Erratum: Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction
45. Nanopore sequencing of influenza A and B in Oxfordshire and the United Kingdom, 2022-23
46. SARS-CoV-2, influenza A/B and respiratory syncytial virus positivity and association with influenza-like illness and self-reported symptoms, over the 2022/23 winter season in the UK: a longitudinal surveillance cohort
47. Intensive Care Unit Wastewater Interventions to Prevent Transmission of Multispecies Klebsiella pneumoniae Carbapenemase–Producing Organisms
48. High Rates of Human Fecal Carriage of mcr-1 –Positive Multidrug-Resistant Enterobacteriaceae Emerge in China in Association With Successful Plasmid Families
49. Intracellular klebsiella infections (donovanosis and rhinoscleroma)
50. Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998–2016: a study of electronic health records
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