44 results on '"Stergar, J."'
Search Results
2. Monitoring of Caffeine Consumption Effect on Skin Blood Properties by Diffuse Reflectance Spectroscopy
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Milanic, M, primary, Hren, R, additional, Stergar, J, additional, and Simoncic, U, additional
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- 2024
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3. Tissue indices for tissue properties extraction in head and neck tumors
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Huang, Zhiwei, Lilge, Lothar D., Keber, C., Krt, A., Stergar, J., Simoncic, U., Groselj, A., Markelc, B., Sersa, G., and Milanic, M.
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- 2023
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4. Tissue indices for tissue properties extraction in head and neck tumors.
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Keber, C., Krt, A., Stergar, J., Simoncic, U., Groselj, A., Markelc, B., Sersa, G., and Milanic, M.
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- 2023
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5. Modular multi-wavelength LED based light source for hyperspectral imaging.
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Dolenec, R., Rogelj, L., Stergar, J., and Milanic, M.
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- 2019
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6. Modular multi-wavelength LED based light source for hyperspectral imaging
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Amelink, Arjen, Nadkarni, Seemantini K., Dolenec, R., Rogelj, L., Stergar, J., and Milanic, M.
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- 2019
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7. Synthesis and Characterization of Silica-Coated Cu$_{1-{\rm x}}$Ni$_{\rm x}$ Nanoparticles
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Stergar, J., primary, Ban, I., additional, Drofenik, M., additional, Ferk, G., additional, and Makovec, D., additional
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- 2012
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8. An educational multimedia IP telephony platform.
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Klanjsek, J., Stergar, J., and Vadlja, S.
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- 2011
9. Implementing digital video into time line based authoring environments.
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Stergar, J. and Horvat, B.
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- 2002
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10. Synthesis and Characterization of Silica-Coated Cu1-xNix Nanoparticles.
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Stergar, J., Ban, I., Drofenik, M., Ferk, G., and Makovec, D.
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- *
METAL coating , *METAL nanoparticles , *INORGANIC synthesis , *MAGNETIC properties of metals , *AMMONIUM bromide , *CHEMICAL reduction , *SILICA - Abstract
The synthesis of magnetic Cu1-xNix nanoparticles was carried out in cationic water-in-oil (w/o) microemulsions of water/cetyl-trimethyl-ammonium bromide (CTAB), n-butanol/isooctane by the reduction of nickel and copper chlorides with hydrazine and NaOH. The synthesized Cu1-xNix particles were heat treated to maintain their proper homogeneity and Curie temperature. Some alloy particles with the composition Cu27.5Ni72.5 were coated with silica prior to the thermal homogenization in order to retain the pristine morphology. The magnetic particles were characterized using XRD, transmission electron microscopy (TEM) and magnetic measurements. The thermal demagnetization in the vicinity of the Curie temperature of the nanoparticles was studied using a modified TGA/SDTA method. [ABSTRACT FROM PUBLISHER]
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- 2012
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11. A Novel Concept of a Cartoon-Generator Application on a Mobile Phone.
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Stergar, J., Šulic, A., and Rodrigues Silva, B. E.
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CARTOONING ,CELL phones ,INTERACTIVE multimedia ,WIRELESS communications ,TECHNOLOGICAL innovations - Abstract
In this work the development and deployment of a new concept of cartoon-generation on a mobile phone is presented. An interactive multimedia application was designed for a push-approach of sending short e-cartoons from a mobile phone to a central WEB server. The concept of a unique cartoon-generator will be discussed. The multimedia Authoring Environment Flash was used for the interactive application design and implementation. The architecture and the design process of the interactive cartoon-generator application will be presented including storyboarding with final testing of the application on a Nokia mobile phone. [ABSTRACT FROM AUTHOR]
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- 2010
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12. Distance learning approach in multimedia tutoring
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Stergar, J., primary and Horvat, B., additional
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13. Implementing digital video into time line based authoring environments
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Stergar, J., primary and Horvat, B., additional
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14. Implementing external applications in an multimedia authoring environment
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Rotovnik, T., primary, Stergar, J., additional, and Horvat, B., additional
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15. Assessment of varying width illumination in hyperspectral push-broom system for scattering anisotropy measurements
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Jansen, E. Duco, Beier, Hope T., Stergar, J., and Milanic, M.
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- 2018
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16. Implementing external applications in an multimedia authoring environment.
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Rotovnik, T., Stergar, J., and Horvat, B.
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- 2003
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17. Distance learning approach in multimedia tutoring.
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Stergar, J. and Horvat, B.
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- 2001
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18. Int-serv framework architecture and QoS implementation in the IPv6.
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Stergar, J. and Horvat, B.
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- 1999
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19. Towards reliable hyperspectral imaging biomarkers of CT26 murine tumor model.
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Tomanic T, Stergar J, Bozic T, Markelc B, Kranjc Brezar S, Sersa G, and Milanic M
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The non-invasive monitoring of tumor growth can offer invaluable diagnostic insights and enhance our understanding of tumors and their microenvironment. Integrating hyperspectral imaging (HSI) with three-dimensional optical profilometry (3D OP) makes contactless and non-invasive tumor diagnosis possible by utilizing the inherent tissue contrast provided by visible (VIS) and near-infrared (NIR) light. Consequently, valuable information regarding tumors and healthy tissues can be extracted from the acquired hyperspectral images. Until now, very few methods have been used to monitor tumor models in vivo daily and non-invasively. In this research, we conducted a 14-day study monitoring BALB/c mice with subcutaneously grown CT26 murine colon carcinomas in vivo , commencing on the day of tumor cell injection. We extracted physiological properties such as total hemoglobin (THB) and tissue oxygenation ( StO 2 ) using the inverse adding-doubling (IAD) algorithm and manually segmented the tissues. We then selected the ten most relevant features describing tumors using the Max-Relevance Min-Redundancy (MRMR) algorithm and utilized 30 classic and advanced machine learning (ML) algorithms to discriminate tumors from healthy tissues. Finally, we tested the robustness of feature selection and model performance by smoothing tissue parameter maps extracted by IAD with a variable kernel and omitting selected training data. We could discriminate CT26 tumor models from surrounding healthy tissues with an area under the curve (AUC) of up to 1 for models based on the gradient boosting method, linear discriminant analysis, and random forests. Our findings help pave the way for precise and robust imaging biomarkers that could aid tumor diagnosis and advance clinical practice., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Author(s).)
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- 2024
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20. Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling.
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Tomanic T, Bozic T, Markelc B, Stergar J, Sersa G, and Milanic M
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- Animals, Mice, Female, Cell Line, Tumor, Algorithms, Mice, Inbred BALB C, Mammary Neoplasms, Experimental diagnostic imaging, Skin diagnostic imaging, Skin chemistry, Image Processing, Computer-Assisted methods, Optical Imaging methods, Hyperspectral Imaging methods, Green Fluorescent Proteins chemistry, Green Fluorescent Proteins genetics, Green Fluorescent Proteins metabolism
- Abstract
Significance: Hyperspectral imaging (HSI) of murine tumor models grown in dorsal skinfold window chambers (DSWCs) offers invaluable insight into the tumor microenvironment. However, light loss in a glass coverslip is often overlooked, and particular tissue characteristics are improperly modeled, leading to errors in tissue properties extracted from hyperspectral images., Aim: We highlight the significance of spectral renormalization in HSI of DSWC models and demonstrate the benefit of incorporating enhanced green fluorescent protein (EGFP) excitation and emission in the skin tissue model for tumors expressing genes to produce EGFP., Approach: We employed an HSI system for intravital imaging of mice with 4T1 mammary carcinoma in a DSWC over 14 days. We performed spectral renormalization of hyperspectral images based on the measured reflectance spectra of glass coverslips and utilized an inverse adding-doubling (IAD) algorithm with a two-layer murine skin model, to extract tissue parameters, such as total hemoglobin concentration and tissue oxygenation ( StO 2 ). The model was upgraded to consider EGFP fluorescence excitation and emission. Moreover, we conducted additional experiments involving tissue phantoms, human forearm skin imaging, and numerical simulations., Results: Hyperspectral image renormalization and the addition of EGFP fluorescence in the murine skin model reduced the mean absolute percentage errors (MAPEs) of fitted and measured spectra by up to 10% in tissue phantoms, 0.55% to 1.5% in the human forearm experiment and numerical simulations, and up to 0.7% in 4T1 tumors. Similarly, the MAPEs for tissue parameters extracted by IAD were reduced by up to 3% in human forearms and numerical simulations. For some parameters, statistically significant differences ( p < 0.05 ) were observed in 4T1 tumors. Ultimately, we have shown that fluorescence emission could be helpful for 4T1 tumor segmentation., Conclusions: The results contribute to improving intravital monitoring of DWSC models using HSI and pave the way for more accurate and precise quantitative imaging., (© 2024 The Authors.)
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- 2024
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21. Effects of phantom microstructure on their optical properties.
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Stergar J, Hren R, and Milanič M
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- Microscopy, Electron, Scanning, Scattering, Radiation, Microspheres, Hyperspectral Imaging methods, Hyperspectral Imaging instrumentation, Phantoms, Imaging, Monte Carlo Method
- Abstract
Significance: Developing stable, robust, and affordable tissue-mimicking phantoms is a prerequisite for any new clinical application within biomedical optics. To this end, a thorough understanding of the phantom structure and optical properties is paramount., Aim: We characterized the structural and optical properties of PlatSil SiliGlass phantoms using experimental and numerical approaches to examine the effects of phantom microstructure on their overall optical properties., Approach: We employed scanning electron microscope (SEM), hyperspectral imaging (HSI), and spectroscopy in combination with Mie theory modeling and inverse Monte Carlo to investigate the relationship between phantom constituent and overall phantom optical properties., Results: SEM revealed that microspheres had a broad range of sizes with average ( 13.47 ± 5.98 ) μ m and were also aggregated, which may affect overall optical properties and warrants careful preparation to minimize these effects. Spectroscopy was used to measure pigment and SiliGlass absorption coefficient in the VIS-NIR range. Size distribution was used to calculate scattering coefficients and observe the impact of phantom microstructure on scattering properties. The results were surmised in an inverse problem solution that enabled absolute determination of component volume fractions that agree with values obtained during preparation and explained experimentally observed spectral features. HSI microscopy revealed pronounced single-scattering effects that agree with single-scattering events., Conclusions: We show that knowledge of phantom microstructure enables absolute measurements of phantom constitution without prior calibration. Further, we show a connection across different length scales where knowledge of precise phantom component constitution can help understand macroscopically observable optical properties., (© 2024 The Authors.)
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- 2024
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22. Harnessing Magnetic Nanoparticles for the Effective Removal of Micro- and Nanoplastics: A Critical Review.
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Vohl S, Kristl M, and Stergar J
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The spread of micro- (MPs) and nanoplastics (NPs) in the environment has become a significant environmental concern, necessitating effective removal strategies. In this comprehensive scientific review, we examine the use of magnetic nanoparticles (MNPs) as a promising technology for the removal of MPs and NPs from water. We first describe the issues of MPs and NPs and their impact on the environment and human health. Then, the fundamental principles of using MNPs for the removal of these pollutants will be presented, emphasizing that MNPs enable the selective binding and separation of MPs and NPs from water sources. Furthermore, we provide a short summary of various types of MNPs that have proven effective in the removal of MPs and NPs. These include ferromagnetic nanoparticles and MNPs coated with organic polymers, as well as nanocomposites and magnetic nanostructures. We also review their properties, such as magnetic saturation, size, shape, surface functionalization, and stability, and their influence on removal efficiency. Next, we describe different methods of utilizing MNPs for the removal of MPs and NPs. We discuss their advantages, limitations, and potential for further development in detail. In the final part of the review, we provide an overview of the existing studies and results demonstrating the effectiveness of using MNPs for the removal of MPs and NPs from water. We also address the challenges that need to be overcome, such as nanoparticle optimization, process scalability, and the removal and recycling of nanoparticles after the completion of the process. This comprehensive scientific review offers extensive insights into the use of MNPs for the removal of MPs and NPs from water. With improved understanding and the development of advanced materials and methods, this technology can play a crucial role in addressing the issues of MPs and NPs and preserving a clean and healthy environment. The novelty of this review article is the emphasis on MNPs for the removal of MPs and NPs from water and a detailed review of the advantages and disadvantages of various MNPs for the mentioned application. Additionally, a review of a large number of publications in this field is provided.
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- 2024
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23. Development of a novel NiCu nanoparticle-loaded polysaccharide-based hydrogel for 3D printing of customizable dressings with promising cytotoxicity against melanoma cells.
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Ćurić LČ, Šuligoj M, Ibic M, Marovič N, Vihar B, Vesenjak M, Dubrovski PD, Novak N, Stergar J, Ban I, Maver U, Milojević M, and Maver T
- Abstract
Polysaccharide hydrogels and metal alloy nanoparticles have already found use in a range of biomedical applications. Nickel-copper nanoparticles (NiCu NPs) are particularly promising due to their tunable properties, such as ferromagnetism, biocompatibility, and antimicrobial activity. At the same time, polysaccharide hydrogels made of polymer mixtures such as alginate and methylcellulose with incorporated metal alloy nanoparticles are reported in the scientific literature. In view of this, in this work, NiCu NPs are combined with polysaccharide hydrogels and 3D printed to construct geometrically customizable dressings with tailorable properties for melanoma treatment. This novel combination exploits the intrinsic magnetic properties of NiCu NPs and the same time builds on their less known properties to improve the mechanic stability of 3D printed materials, both contributing to a previously not reported application as potent cytotoxic dressing against melanoma cells. The dressings were evaluated in terms of their physico-chemical characteristics, and their potential application, namely melanoma cell cytotoxicity. While all dressings exhibited similar degradation profiles regardless of composition, the addition of NiCu NPs had an effect on the hydrophilicity, swelling rates, and topographical properties of the dressings. Compression results showed that the presence of NPs increased the stiffness of the dressings, while the ultimate tensile strength was highest at 0.31 MPa for the dressings with 0.5 wt% NPs. We show that although the base formulation of the dressings is biocompatible with skin-derived cells, dressings loaded with NPs exhibit promising antimelanoma activity. Extracts obtained from dressings containing 0.5 wt% NPs reduced melanoma cell viability to 61% ± 11% and 40% ± 2% after 24 h and 72 h of soaking, respectively. Furthermore, extracts of dressings with 1 wt% NPs reduced melanoma cell viability to less than 15% within the first 24 h. By adjusting the NP content, the mechanical properties, surface roughness, and wettability can be tuned so that the dressings can be functionally customized. In addition, by using 3D printing as a fabrication process, the shape and composition of the dressings can be tailored to the patient's needs. The dressings also remained intact after soaking in simulated physiological solution for 14 days, indicating their suitability for long-term topical application., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)
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- 2023
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24. Microwave Synthesis of Poly(Acrylic) Acid-Coated Magnetic Nanoparticles as Draw Solutes in Forward Osmosis.
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Vohl S, Ban I, Drofenik M, Buksek H, Gyergyek S, Petrinic I, Hélix-Nielsen C, and Stergar J
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Polyacrylic acid (PAA)-coated magnetic nanoparticles (MNP@PAA) were synthesized and evaluated as draw solutes in the forward osmosis (FO) process. MNP@PAA were synthesized by microwave irradiation and chemical co-precipitation from aqueous solutions of Fe
2+ and Fe3+ salts. The results showed that the synthesized MNPs have spherical shapes of maghemite Fe2 O3 and superparamagnetic properties, which allow draw solution (DS) recovery using an external magnetic field. Synthesized MNP, coated with PAA, yielded an osmotic pressure of ~12.8 bar at a 0.7% concentration, resulting in an initial water flux of 8.1 LMH. The MNP@PAA particles were captured by an external magnetic field, rinsed in ethanol, and re-concentrated as DS in repetitive FO experiments with deionized water as a feed solution (FS). The osmotic pressure of the re-concentrated DS was 4.1 bar at a 0.35% concentration, resulting in an initial water flux of 2.1 LMH. Taken together, the results show the feasibility of using MNP@PAA particles as draw solutes.- Published
- 2023
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25. Design and Validation of a Custom-Made Hyperspectral Microscope Imaging System for Biomedical Applications.
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Stergar J, Hren R, and Milanič M
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- Spectrum Analysis, Calibration, Histological Techniques, Microscopy methods, Hyperspectral Imaging
- Abstract
Hyperspectral microscope imaging (HMI) is an emerging modality that integrates spatial information collected by standard laboratory microscopy and the spectral-based contrast obtained by hyperspectral imaging and may be instrumental in establishing novel quantitative diagnostic methodologies, particularly in histopathology. Further expansion of HMI capabilities hinges upon the modularity and versatility of systems and their proper standardization. In this report, we describe the design, calibration, characterization, and validation of the custom-made laboratory HMI system based on a Zeiss Axiotron fully motorized microscope and a custom-developed Czerny-Turner-type monochromator. For these important steps, we rely on a previously designed calibration protocol. Validation of the system demonstrates a performance comparable to classic spectrometry laboratory systems. We further demonstrate validation against a laboratory hyperspectral imaging system for macroscopic samples, enabling future comparison of spectral imaging results across length scales. An example of the utility of our custom-made HMI system on a standard hematoxylin and eosin-stained histology slide is also shown.
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- 2023
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26. Estimating quantitative physiological and morphological tissue parameters of murine tumor models using hyperspectral imaging and optical profilometry.
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Tomanic T, Rogelj L, Stergar J, Markelc B, Bozic T, Brezar SK, Sersa G, and Milanic M
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- Humans, Animals, Mice, Models, Theoretical, Optical Imaging methods, Tumor Microenvironment, Hyperspectral Imaging, Neoplasms diagnostic imaging
- Abstract
Understanding tumors and their microenvironment are essential for successful and accurate disease diagnosis. Tissue physiology and morphology are altered in tumors compared to healthy tissues, and there is a need to monitor tumors and their surrounding tissues, including blood vessels, non-invasively. This preliminary study utilizes a multimodal optical imaging system combining hyperspectral imaging (HSI) and three-dimensional (3D) optical profilometry (OP) to capture hyperspectral images and surface shapes of subcutaneously grown murine tumor models. Hyperspectral images are corrected with 3D OP data and analyzed using the inverse-adding doubling (IAD) method to extract tissue properties such as melanin volume fraction and oxygenation. Blood vessels are segmented using the B-COSFIRE algorithm from oxygenation maps. From 3D OP data, tumor volumes are calculated and compared to manual measurements using a vernier caliper. Results show that tumors can be distinguished from healthy tissue based on most extracted tissue parameters ( p < 0.05 ). Furthermore, blood oxygenation is 50% higher within the blood vessels than in the surrounding tissue, and tumor volumes calculated using 3D OP agree within 26% with manual measurements using a vernier caliper. Results suggest that combining HSI and OP could provide relevant quantitative information about tumors and improve the disease diagnosis., (© 2022 The Authors. Journal of Biophotonics published by Wiley-VCH GmbH.)
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- 2023
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27. Molecular and Cellular Markers in Chlorhexidine-Induced Peritoneal Fibrosis in Mice.
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Brezovec N, Kojc N, Erman A, Hladnik M, Stergar J, Milanič M, Tomšič M, Čučnik S, Sodin-Šemrl S, Perše M, and Lakota K
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Understanding the tissue changes and molecular mechanisms of preclinical models is essential for creating an optimal experimental design for credible translation into clinics. In our study, a chlorhexidine (CHX)-induced mouse model of peritoneal fibrosis was used to analyze histological and molecular/cellular alterations induced by 1 and 3 weeks of intraperitoneal CHX application. CHX treatment for 1 week already caused injury, degradation, and loss of mesothelial cells, resulting in local inflammation, with the most severe structural changes occurring in the peritoneum around the ventral parts of the abdominal wall. The local inflammatory response in the abdominal wall showed no prominent differences between 1 and 3 weeks. We observed an increase in polymorphonuclear cells in the blood but no evidence of systemic inflammation as measured by serum levels of serum amyloid A and interleukin-6. CHX-induced fibrosis in the abdominal wall was more pronounced after 3 weeks, but the gene expression of fibrotic markers did not change over time. Complement system molecules were strongly expressed in the abdominal wall of CHX-treated mice. To conclude, both histological and molecular changes were already present in week 1, allowing examination at the onset of fibrosis. This is crucial information for refining further experiments and limiting the amount of unnecessary animal suffering.
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- 2022
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28. Design and Validation of a Custom-Made Laboratory Hyperspectral Imaging System for Biomedical Applications Using a Broadband LED Light Source.
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Stergar J, Hren R, and Milanič M
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- Calibration, Spectrum Analysis, Raman, Hyperspectral Imaging, Optical Imaging methods
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Hyperspectral imaging (HSI) is a promising optical modality that is already being used in numerous applications. Further expansion of the capabilities of HSI depends on the modularity and versatility of the systems, which would, inter alia , incorporate profilometry, fluorescence imaging, and Raman spectroscopy while following a rigorous calibration and verification protocols, thus offering new insights into the studied samples as well as verifiable, quantitative measurement results applicable to the development of quantitative metrics. Considering these objectives, we developed a custom-made laboratory HSI system geared toward biomedical applications. In this report, we describe the design, along with calibration, characterization, and verification protocols needed to establish such systems, with the overall goal of standardization. As an additional novelty, our HSI system uses a custom-built broadband LED-based light source for reflectance imaging, which is particularly important for biomedical applications due to the elimination of sample heating. Three examples illustrating the utility and advantages of the integrated system in biomedical applications are shown. Our attempt presents both the development of a custom-based laboratory HSI system with novel LED light source as well as a framework which may improve technological standards in HSI system design.
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- 2022
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29. Hyperspectral evaluation of vasculature in induced peritonitis mouse models.
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Stergar J, Lakota K, Perše M, Tomšič M, and Milanič M
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Imaging of blood vessel structure in combination with functional information about blood oxygenation can be important in characterizing many different health conditions in which the growth of new vessels contributes to the overall condition. In this paper, we present a method for extracting comprehensive maps of the vasculature from hyperspectral images that include tissue and vascular oxygenation. We also show results from a preclinical study of peritonitis in mice. First, we analyze hyperspectral images using Beer-Lambert exponential attenuation law to obtain maps of hemoglobin species throughout the sample. We then use an automatic segmentation algorithm to extract blood vessels from the hemoglobin map and combine them into a vascular structure-oxygenation map. We apply this methodology to a series of hyperspectral images of the abdominal wall of mice with and without induced peritonitis. Peritonitis is an inflammation of peritoneum that leads, if untreated, to complications such as peritoneal sclerosis and even death. Characteristic inflammatory response can also be accompanied by changes in vasculature, such as neoangiogenesis. We demonstrate a potential application of the proposed segmentation and processing method by introducing an abnormal tissue fraction metric that quantifies the amount of tissue that deviates from the average values of healthy controls. It is shown that the proposed metric successfully discriminates between healthy control subjects and model subjects with induced peritonitis and has a high statistical significance., Competing Interests: The authors declare that there are no conflicts of interest related to this article., (© 2022 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement.)
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- 2022
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30. Superparamagnetic Fe 3 O 4 @CA Nanoparticles and Their Potential as Draw Solution Agents in Forward Osmosis.
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Petrinic I, Stergar J, Bukšek H, Drofenik M, Gyergyek S, Hélix-Nielsen C, and Ban I
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In this study, citric acid (CA)-coated magnetite Fe
3 O4 magnetic nanoparticles (Fe3 O4 @CA MNPs) for use as draw solution (DS) agents in forward osmosis (FO) were synthesized by co-precipitation and characterized by Fourier transform infrared spectroscopy (FTIR), thermogravimetric analysis (TGA), dynamic light scattering (DLS), transmission electron microscopy (TEM) and magnetic measurements. Prepared 3.7% w / w colloidal solutions of Fe3 O4 @CA MNPs exhibited an osmotic pressure of 18.7 bar after purification without aggregation and a sufficient magnetization of 44 emu/g to allow DS regeneration by an external magnetic field. Fe3 O4 @CA suspensions were used as DS in FO cross-flow filtration with deionized (DI) water as FS and with the active layer of the FO membrane facing the FS and NaCl as a reference DS. The same transmembrane bulk osmotic pressure resulted in different water fluxes for NaCl and MNPs, respectively. Thus the initial water flux with Fe3 O4 @CA was 9.2 LMH whereas for 0.45 M NaCl as DS it was 14.1 LMH. The reverse solute flux was 0.08 GMH for Fe3 O4 @CA and 2.5 GMH for NaCl. These differences are ascribed to a more pronounced internal dilutive concentration polarization with Fe3 O4 @CA as DS compared to NaCl as DS. This research demonstrated that the proposed Fe3 O4 @CA can be used as a potential low reverse solute flux DS for FO processes.- Published
- 2021
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31. Effect of curvature correction on parameters extracted from hyperspectral images.
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Rogelj L, Simončič U, Tomanič T, Jezeršek M, Pavlovčič U, Stergar J, and Milanič M
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- Humans, Phantoms, Imaging, Artifacts, Optical Imaging
- Abstract
Significance: Hyperspectral imaging (HSI) has emerged as a promising optical technique. Besides optical properties of a sample, other sample physical properties also affect the recorded images. They are significantly affected by the sample curvature and sample surface to camera distance. A correction method to reduce the artifacts is necessary to reliably extract sample properties., Aim: Our aim is to correct hyperspectral images using the three-dimensional (3D) surface data and assess how the correction affects the extracted sample properties., Approach: We propose the combination of HSI and 3D profilometry to correct the images using the Lambert cosine law. The feasibility of the correction method is presented first on hemispherical tissue phantoms and next on human hands before, during, and after the vascular occlusion test (VOT)., Results: Seven different phantoms with known optical properties were created and imaged with a hyperspectral system. The correction method worked up to 60 deg inclination angle, whereas for uncorrected images the maximum angles were 20 deg. Imaging hands before, during, and after VOT shows good agreement between the expected and extracted skin physiological parameters., Conclusions: The correction method was successfully applied on the images of tissue phantoms of known optical properties and geometry and VOT. The proposed method could be applied to any reflectance optical imaging technique and should be used whenever the sample parameters need to be extracted from a curved surface sample.
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- 2021
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32. Thermophoretic tweezers for single nanoparticle manipulation.
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Stergar J and Osterman N
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We present the trapping and manipulation of a single nano-object in an aqueous medium by optically induced temporally varying temperature gradients. By real-time object tracking and control of the position of the heating laser focus, we can precisely employ thermophoretic drift to oppose the random diffusive motion. As a result, a nano-object is confined in a micrometer-sized trap. Numerical modeling gives a quantitative prediction of the effect. Traps can be dynamically created and relocated, which we demonstrate by the controlled independent manipulation of two nanoparticles., (Copyright © 2020, Stergar and Osterman; licensee Beilstein-Institut.)
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- 2020
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33. Erratum: Optical properties of PlatSil SiliGlass tissue-mimicking phantoms: erratum.
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Naglič P, Zelinskyi Y, Rogelj L, Stergar J, Milanič M, Novak J, Kumperščak B, and Bürmen M
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[This corrects the article on p. 3753 in vol. 11.]., (© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.)
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- 2020
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34. Optical properties of PlatSil SiliGlass tissue-mimicking phantoms.
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Naglič P, Zelinskyi Y, Rogelj L, Stergar J, Milanič M, Novak J, Kumperščak B, and Bürmen M
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In this work, we revise the preparation procedure and conduct an in depth characterization of optical properties for the recently proposed silicone-based tissue-mimicking optical phantoms in the spectral range from 475 to 925 nm. The optical properties are characterized in terms of refractive index and its temperature dependence, absorption and reduced scattering coefficients and scattering phase function related quantifiers. The scattering phase function and related quantifiers of the optical phantoms are first assessed within the framework of the Mie theory by using the measured refractive index of SiliGlass and size distribution of the hollow silica spherical particles that serve as scatterers. A set of purely absorbing optical phantoms in cuvettes is used to evaluate the linearity of the absorption coefficient with respect to the concentration of black pigment that serves as the absorber. Finally, the optical properties in terms of the absorption and reduced scattering coefficients and the subdiffusive scattering phase function quantifier γ are estimated for a subset of phantoms from spatially resolved reflectance using deep learning aided inverse models. To this end, an optical fiber probe with six linearly arranged optical fibers is used to collect the backscattered light at small and large distances from the source fiber. The underlying light propagation modeling is based on the stochastic Monte Carlo method that accounts for all the details of the optical fiber probe., Competing Interests: The authors declare that there are no conflicts of interest., (© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.)
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- 2020
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35. Hyperspectral evaluation of peritoneal fibrosis in mouse models.
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Stergar J, Dolenec R, Kojc N, Lakota K, Perše M, Tomšič M, and Milanic M
- Abstract
Analysis of morphological changes of the peritoneal membrane is an essential part of animal studies when investigating molecular mechanisms involved in the development of peritoneal fibrosis or testing the effects of potential therapeutic agents. Current methods, such as histology and immunohistochemistry, require time consuming sample processing and analysis and result in limited spatial information. In this paper we present a new method to evaluate structural and chemical changes in an animal model of peritoneal fibrosis that is based on hyperspectral imaging and a model of light transport. The method is able to distinguish between healthy and diseased subjects based on morphological as well as physiological parameters such as blood and scattering parameters. Furthermore, it enables evaluation of changes, such as degree of inflammation and fibrosis, that are closely related to histological findings., Competing Interests: The authors declare that there are no conflicts of interest related to this article., (© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.)
- Published
- 2020
- Full Text
- View/download PDF
36. Curvature and height corrections of hyperspectral images using built-in 3D laser profilometry.
- Author
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Rogelj L, Pavlovčič U, Stergar J, Jezeršek M, Simončič U, and Milanič M
- Abstract
Optical imaging systems use a light source that illuminates a sample and a photodetector that detects light reflected from or transmitted through the sample. The sample surface curvature, surface-to-camera distance, and illumination-source-to-surface distance significantly affect the measured signal, resulting in image artifacts. To correct the images, a three-dimensional (3D) profilometry system was used to obtain 3D surface information. The 3D information enables image correction using Lambert cosine law and height correction. In this study, the feasibility of the correction method for push-broom hyperspectral imaging of three different objects is presented. Results show a significant reduction of image artifacts, making further image analysis more accurate and robust. The presented 3D profilometry method is applicable to all push-broom imaging systems and the described correction procedure can be applied to all spectral or monochromatic imaging systems.
- Published
- 2019
- Full Text
- View/download PDF
37. Temperature Depth Profiles Induced in Human Skin In Vivo Using Pulsed 975 nm Irradiation.
- Author
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Milanic M, Cenian A, Verdel N, Cenian W, Stergar J, and Majaron B
- Subjects
- Adult, Female, Humans, Male, Middle Aged, Hot Temperature, Lasers, Semiconductor, Lasers, Solid-State, Skin radiation effects
- Abstract
Background and Objectives: The aim of this study was to determine the temperature depth profiles induced in human skin in vivo by using a pulsed 975 nm diode laser (with 5 ms pulse duration) and compare them with those induced by the more common 532 nm (KTP) and 1,064 nm (Nd:YAG) lasers. Quantitative assessment of the energy deposition characteristics in human skin at 975 nm should help design of safe and effective treatment protocols when using such lasers., Study Design/materials and Methods: Temperature depth profiles induced in the human skin by the three lasers were determined using pulsed photothermal radiometry (PPTR). This technique involves time-resolved measurement of mid-infrared emission from the irradiated test site and reconstruction of the laser-induced temperature profiles using an earlier developed optimization algorithm. Measurements were performed on volar sides of the forearms in seven volunteers with healthy skin. At irradiation spot diameters of 3-4 mm, the radiant exposures were 0.24, 0.36, and 5.7 J/cm
2 for the 975, 532, and 1,064 nm lasers, respectively., Results: Upon normalization to the same radiant exposure of 1 J/cm2 , the assessed maximum temperature rise in the epidermis averaged 0.8 °C for the 975 nm laser, 7.4 °C for the 532 nm, and 0.6 °C for the 1,064 nm laser. The characteristic subsurface depth to which 50% of the absorbed laser energy was deposited was on average 0.31 mm at 975 nm irradiation, and slightly deeper at 1,064 nm, and 0.15 mm at 532 nm. The experimentally obtained relations were reproduced in a dedicated numerical simulation., Conclusions: The assessed energy deposition characteristics show that the pulsed 975 nm diode laser is very suitable for controlled heating of the upper dermis as required, for example, for nonablative skin rejuvenation. The risks of nonselective overheating of the epidermis and subcutis are significantly reduced in comparison with irradiation at 532 and 1,064 nm, respectively. Lasers Surg. Med. © 2019 Wiley Periodicals, Inc., (© 2019 Wiley Periodicals, Inc.)- Published
- 2019
- Full Text
- View/download PDF
38. A green approach to obtain stable and hydrophilic cellulose-based electrospun nanofibrous substrates for sustained release of therapeutic molecules.
- Author
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Kurečič M, Mohan T, Virant N, Maver U, Stergar J, Gradišnik L, Kleinschek KS, and Hribernik S
- Abstract
Stable and (bio)-compatible nanofibrous matrices showing effective incorporation and release of nonsteroidal anti-inflammatory drugs (NSAIDs) hold a huge potential in tissue regeneration and wound healing. Herein, a two-step, water-based and needleless electrospinning method is used to fabricate thermally cross-linked multifunctional nanofibrous substrates from a hydrophilic cellulose derivative, i.e. carboxymethyl cellulose (CMC), and polyethylene glycol (PEG) with an in situ incorporated NSAID, diclofenac (DCF). Electrospun bi-component blend nanofibers, strongly linked together by ester bonds, with different degrees of cross-linking density are achieved by varying the concentrations of butanetetracarboxylic acid (BTCA, a green polycarboxylic cross-linker) and the sodium hypophosphite (SHP) catalyst, and the temperature. The results demonstrated that not only the dimensional stability and swelling properties could be better controlled but also the morphology, fiber diameter, surface area, pore volume, pore size, and functionality of the cross-linked nanofibers. Release kinetics of DCF from the nanofibrous substrates are controlled and prolonged up to 48 h, and the overall released mass of DCF decreased linearly with increasing cross-linking degree of BTCA and SHP. Fitting of release data using various kinetic models revealed that the release of DCF follows a non-Fickian (diffusion and erosion controlled) to Fickian mechanism (only diffusion-controlled process). Cell viability testing based on crystal violet dyeing showed that the DCF-incorporating nanofibers have excellent biocompatibility and no toxic effect on human skin fibroblast cells. Overall, the reported DCF-incorporating nanofibrous substrate demonstrates high potential to be used as a smart drug delivery system in wound healing, especially due to its noninvasive characteristics., Competing Interests: There are no conflicts to declare., (This journal is © The Royal Society of Chemistry.)
- Published
- 2019
- Full Text
- View/download PDF
39. A protocol for metabolic characterization of human induced pluripotent stem cell-derived cardiomyocytes (iPS-CM).
- Author
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House A, Fatica E, Shah R, Stergar J, Pearce R, and Sandlers Y
- Abstract
Recent advances in human induced pluripotent stem cell-derived cardiomyocytes (iPSCM) field offer a novel platform for modeling cardiac metabolism, heart diseases drug candidates screening and cardiac toxicity assessments. These workflows require a fully functional characterization of iPSCMs. Here we report a step by step protocol for iPSCM metabolic characterization. The described assays cover analysis of small metabolites involved in a vital metabolic pathways., (© 2019 The Authors.)
- Published
- 2019
- Full Text
- View/download PDF
40. Intervertebral disc tissue engineering: A brief review.
- Author
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Stergar J, Gradisnik L, Velnar T, and Maver U
- Subjects
- Animals, Biocompatible Materials chemistry, Cell- and Tissue-Based Therapy, Drug Delivery Systems, Humans, Low Back Pain therapy, Phenotype, Polymers chemistry, Quality of Life, Tissue Scaffolds chemistry, Intervertebral Disc physiopathology, Intervertebral Disc Degeneration therapy, Intervertebral Disc Displacement therapy, Tissue Engineering methods
- Abstract
Intervertebral disc (IVD) degeneration (IDD) is associated with low back pain and significantly affects the patient's quality of life. Degeneration of the IVD alters disk height and the mechanics of the spine, leading to chronic segmental spinal instability. The pathophysiology of IVD disease is still not well understood. Current therapies for IDD include conservative and invasive approaches, but none of those treatments are able to restore the disc structure and function. Recently, tissue engineering techniques emerged as a possible approach to treat IDD, by replacing a damaged IVD with scaffolds and appropriate cells. Advances in manufacturing techniques, material processing and development, surface functionalization, drug delivery systems and cell incorporation furthered the development of tissue engineering therapies. In this review, biomaterial scaffolds and cell-based therapies for IVD regeneration are briefly discussed.
- Published
- 2019
- Full Text
- View/download PDF
41. Multilayered Polysaccharide Nanofilms for Controlled Delivery of Pentoxifylline and Possible Treatment of Chronic Venous Ulceration.
- Author
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Stana J, Stergar J, Gradišnik L, Flis V, Kargl R, Fröhlich E, Stana Kleinschek K, Mohan T, and Maver U
- Subjects
- Cell Line, Humans, Alginates chemistry, Chitosan chemistry, Nanostructures chemistry, Pentoxifylline administration & dosage, Platelet Aggregation Inhibitors administration & dosage, Varicose Ulcer drug therapy
- Abstract
Local drug delivery systems made from nontoxic polysaccharide nanofilms have an enormous potential in wound care. A detailed understanding of the structural, surface, physicochemical, and cytotoxic properties of such systems is crucial to design clinically efficacious materials. Herein, we fabricated polysaccharide-based nanofilms onto either a 2D model (SiO
2 and Au sensors) or on nonwoven alginate 3D substrates using an alternating assembly of N,N,N-trimethylchitosan (TMC) and alginic acid (ALG) by a spin-assisted layer-by-layer (LbL) technique. These TMC/ALG multilayered nanofilms are used for a uniform encapsulation and controlled release of pentoxifylline (PTX), a potent anti-inflammatory drug for treatment of the chronic venous ulceration. We show a tailorable film growth and mass, morphology, as well as surface properties (charge, hydrophilicity, porosity) of the assembled nanofilms through control of the coating during the spin-assisted assembly. The uniform distribution of the encapsulated PTX in the TMC/ALG nanofilms is preserved even with when the amount of the incorporated PTX increases. The PTX release mechanism from the model and real systems is studied in detail and is very comparable for both systems. Finally, different cell-based assays illustrated the potential of the TMC/ALG multilayer system in wound care (e.g., treatment chronic venous ulceration) applications, including a decrease of TNF-α secretion, a common indicator of inflammation.- Published
- 2017
- Full Text
- View/download PDF
42. Novel chitosan/diclofenac coatings on medical grade stainless steel for hip replacement applications.
- Author
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Finšgar M, Uzunalić AP, Stergar J, Gradišnik L, and Maver U
- Subjects
- Humans, Male, Arthroplasty, Replacement, Hip, Chitosan chemistry, Coated Materials, Biocompatible chemistry, Diclofenac chemistry, Hip Prosthesis, Materials Testing, Osteoblasts metabolism, Stainless Steel chemistry
- Abstract
Corrosion resistance, biocompatibility, improved osteointegration, as well the prevention of inflammation and pain are the most desired characteristics of hip replacement implants. In this study we introduce a novel multi-layered coating on AISI 316LVM stainless steel that shows promise with regard to all mentioned characteristics. The coating is prepared from alternating layers of the biocompatible polysaccharide chitosan and the non-steroid anti-inflammatory drug (NSAID), diclofenac. Electrochemical methods were employed to characterize the corrosion behavior of coated and uncoated samples in physiological solution. It is shown that these coatings improve corrosion resistance. It was also found that these coatings release the incorporated drug in controlled, multi-mechanism manner. Adding additional layers on top of the as-prepared samples, has potential for further tailoring of the release profile and increasing the drug dose. Biocompatibility was proven on human-derived osteoblasts in several experiments. Only viable cells were found on the sample surface after incubation of the samples with the same cell line. This novel coating could prove important for prolongation of the application potential of steel-based hip replacements, which are these days often replaced by more expensive ceramic or other metal alloys.
- Published
- 2016
- Full Text
- View/download PDF
43. Synthesis of chromium-nickel nanoparticles prepared by a microemulsion method and mechanical milling.
- Author
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Ban I, Stergar J, Drofenik M, Ferk G, and Makovec D
- Subjects
- Emulsions, Powder Diffraction, X-Ray Diffraction, Alloys chemistry, Chromium chemistry, Nanoparticles chemistry, Nickel chemistry
- Abstract
A chemical and a physical method have been applied for the preparation of chromium-nickel alloy nanoparticles. These particles were designed to be used for controlled magnetic hyperthermia applications. Microemulsions with Ni2+ and Cr3+ and/or NaBH4 as precursors were prepared using the isooctane/CTAB, n-butanol/H2O system. The samples of CrxNi1-x nanoparticles with the desired composition were obtained after the reduction of their salts with NaBH4 and afterwards heat treated in a TGA in a N2 atmosphere at various temperatures. The CrxNi1-x materials were also prepared by mechanical milling. Utilizing a ball-to-powder mass ratio of 20 : 1 and selecting the proper alloy compositions we were able to obtain nanocrystalline CrxNi1-x particles. Thermal demagnetization in the vicinity of the Curie temperature of the nanoparticles was studied using a modified TGA-SDTA method. The alloy's phase composition, size and morphology were determined with XRD measurements and TEM analyses.
- Published
- 2013
44. A facile route to the synthesis of coated maghemite nanocomposites for hyperthermia applications.
- Author
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Ferk G, Ban I, Stergar J, Makovec D, Hamler A, Jagličić Z, and Drofenik M
- Abstract
CM-dextran-covered maghemite particles for applications in magnetic hyperthermia treatments were synthesized and their physical, magnetic and morphological properties were examined. Magnetic fluids were prepared and their heating properties in an alternating magnetic field were studied. The results reveal that the particle size and the thickness of the carboxy-methyl-dextran (CM-dextran) coatings have a decisive influence on the heating properties: specific absorption rate (SAR). The majority of the magnetic dissipation comes from the Neel relaxation, while the Brown contribution is small. A thermal steady state at the selected temperature (42 °C) can be achieved using synthesized maghemite particles with proper particle morphology and by controlling the magnetic field intensity or the frequency.
- Published
- 2012
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