1. Evaluation of potential inhibitors of squalene synthase based on virtual screening and in vitro studies.
- Author
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Huang, Han, Chu, Chen-Liang, Chen, Lin, and Shui, Dong
- Subjects
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DRUG design , *COMPUTER-assisted drug design , *MEDICAL databases , *IN vitro studies , *CHINESE medicine , *MOLECULAR docking , *CAD/CAM systems software - Abstract
• Squalene synthase(SQS)is a potential target for hyperlipidemia treatment. • Potential SQS inhibitors with novel scaffolds are identified based on computer-aided drug design. • Hit compounds are drug-like, showing better SQS-inhibitory activities in vitro evaluation. • Via molecular docking analysis, both hit1 and hit2 are observed to have similar interactions with the binding site of SQS. • These compounds are verified to be promising candidates for hyperlipidemia therapy. Squalene synthase (SQS) is a potential target for hyperlipidemia treatment. To identify novel chemical scaffolds of SQS inhibitors, we generated 3D-QSAR pharmacophore models using HypoGen. The best quantitative pharmacophore model, Hypo 1, was selected for virtual screening using two chemical databases, Specs and Traditional Chinese Medicine database (TCM). The best-mapped hit compounds were then subjected to filtering by Lipinski's rule of five and docking studies to refine the hits. Finally, five compounds were selected from the top-ranked hit compounds for SQS inhibitory assay in vitro. Three of these compounds could inhibit SQS in vitro, and should be further evaluated pre-clinically as a treatment for hyperlipidemia. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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