25 results on '"Sorrells S"'
Search Results
2. Use of a novel electronic data collection system in multicenter studies of irritable bowel syndrome
- Author
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HARDING, J. P., HAMM, L. R., EHSANULLAH, R. S. B., HEATH, A. T., SORRELLS, S. C., HAW, J., DUKES, G. E., WOLFE, S. G., MANGEL, A. W., and NORTHCUTT, A. R.
- Published
- 1997
3. Glucocorticoid Signaling in Myeloid Cells Worsens Acute CNS Injury and Inflammation
- Author
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Sorrells, S. F., primary, Caso, J. R., additional, Munhoz, C. D., additional, Hu, C. K., additional, Tran, K. V., additional, Miguel, Z. D., additional, Chien, B. Y., additional, and Sapolsky, R. M., additional
- Published
- 2013
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4. Glucocorticoids Exacerbate Lipopolysaccharide-Induced Signaling in the Frontal Cortex and Hippocampus in a Dose-Dependent Manner
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Munhoz, C. D., primary, Sorrells, S. F., additional, Caso, J. R., additional, Scavone, C., additional, and Sapolsky, R. M., additional
- Published
- 2010
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5. Pharmacokinetics and Safety of Subcutaneous Immune Globulin (Human), 10% Caprylate/Chromatography Purified (IGIV-C) in Patients with Primary Immunodeficiency Disease (PID)
- Author
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Levy, R., primary, Chen, J., additional, Roberts, R., additional, Sorrells, S., additional, Stark, D., additional, Tracy, J., additional, Wasserman, R.L., additional, and Gupta, S., additional
- Published
- 2010
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6. Long-term safety of Prolastin®-C, an alpha1-proteinase inhibitor, in Japanese patients with alpha1-antitrypsin deficiency.
- Author
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Seyama K, Suzuki M, Tasaka S, Nukiwa T, Sato T, Konno S, Sorrells S, Chen J, Aragonés ME, and Minamino H
- Subjects
- Adult, Humans, Japan epidemiology, Pulmonary Disease, Chronic Obstructive epidemiology, alpha 1-Antitrypsin adverse effects, alpha 1-Antitrypsin Deficiency drug therapy
- Abstract
Background: Safety and pharmacokinetics (PK) of alpha
1 -proteinase inhibitor, modified process (Alpha-1 MP), was evaluated in a clinical trial of Japanese patients with alpha1 -antitrypsin deficiency (AATD). The present study aimed to evaluate the long-term safety of weekly intravenous infusions of 60 mg/kg Alpha-1 MP in Japanese patients with AATD., Methods: This was a multi-center, open-label extension (OLE) study that enrolled adult patients with AATD, who had completed the preceding safety and PK clinical trial. Patients were administered with Alpha-1 MP (60 mg/kg) weekly, for 52 weeks, and this could be renewed annually. Alpha1-MP trough levels (Cmin ) were evaluated, and safety endpoints include: treatment-emergent adverse events (TEAEs), serious adverse events (SAEs), TEAEs potentially related to Alpha-1 MP, chronic obstructive pulmonary disease (COPD) exacerbations, laboratory parameters, vital signs, and pulmonary function tests (forced expiration volume in 1 s [FEV1 ] and forced vital capacity [FVC])., Results: Four patients underwent Alpha-1 MP intravenous infusions at a mean (SD) of 210.8 (9.54) for 213 weeks (four years), with a Cmin of 55.73 (4.99) mg/dL. A total of fifty-four TEAEs were reported in four patients, in which most of them were mild (n = 52, 96.3%). Two patients had five SAEs, and all were unrelated to treatment. Three mild TEAEs were potentially related to treatment with Alpha-1 MP. No clinically significant findings in laboratory parameters, COPD exacerbations, or vital signs were observed. There were no identifiable differences in FEV1 and FVC throughout the study period., Conclusions: Long-term weekly intravenous infusions of 60 mg/kg Alpha-1 MP are generally safe and well-tolerated in Japanese patients with AATD., Clinicaltrials: GOV: NCT02870348; JAPIC CTI: JapicCTI-163194., Competing Interests: Conflict of interest Maria Esperança Aragonés is a full-time employee of Grifols. Susan Sorrells, Junliang Chen, and Hitoshi Minamino are former full-time employees of Grifols. Masaru Suzuki and Satoshi Konno have received research support from Novartis Pharmaceutical Co. Kuniaki Seyama, Sadatomo Tasaka, Tadashi Sato, and Toshihiro Nukiwa declare no conflict of interest., (Copyright © 2022 [The Author/The Authors]. Published by Elsevier B.V. All rights reserved.)- Published
- 2022
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7. Longitudinal and multi-tissue molecular diagnostics track somatic BRCA2 reversion mutations that correct the open reading frame of germline alteration upon clinical relapse.
- Author
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Sorrells S, McKinnon KE, McBratney A, and Sumey C
- Abstract
BRCA-mutant cancers often develop therapeutic resistance through several mechanisms. Here, we report a case of pathogenic germline BRCA2-driven breast cancer monitored for disease progression and acquired resistance using longitudinal multi-tissue genomic testing. Briefly, genomic testing was performed throughout the course of disease on tumor tissue from multiple sites, circulating tumor DNA from blood plasma, and matched normal tissue. Genomic analyses identified actionable variants for targeted therapies, as well as emerging resistance mutations over time. Two unique BRCA2 somatic alterations (p.N255fs and p.D252fs) were identified upon resistance to PARP inhibitor and platinum treatment, respectively. Both alterations restored the open reading frame of the original germline alteration, likely accounting for acquired resistance. This case exemplifies the evolution of multiple subclonal BRCA reversion alterations over time and demonstrates the value of longitudinal multi-tissue genomic testing for monitoring disease progression, predicting measures of response, and evaluating treatment outcomes in oncology patients.
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- 2021
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8. Identification of amygdala-expressed genes associated with autism spectrum disorder.
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Herrero MJ, Velmeshev D, Hernandez-Pineda D, Sethi S, Sorrells S, Banerjee P, Sullivan C, Gupta AR, Kriegstein AR, and Corbin JG
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- Alleles, Amygdala physiopathology, Animals, Autism Spectrum Disorder metabolism, Brain metabolism, Brain physiopathology, Computational Biology methods, Databases, Genetic, Gene Expression, Gene Expression Profiling, Gene Ontology, Gene Regulatory Networks, Genetic Predisposition to Disease, Humans, Mice, Signal Transduction, Transcriptome, Amygdala metabolism, Autism Spectrum Disorder etiology, Biomarkers, Disease Susceptibility
- Abstract
Background: Studies of individuals with autism spectrum disorder (ASD) have revealed a strong multigenic basis with the identification of hundreds of ASD susceptibility genes. ASD is characterized by social deficits and a range of other phenotypes, implicating complex genetics and involvement of a variety of brain regions. However, how mutations and mis-expression of select gene sets are associated with the behavioral components of ASD remains unknown. We reasoned that for genes to be associated with ASD core behaviors they must be: (1) expressed in brain regions relevant to ASD social behaviors and (2) expressed during the ASD susceptible window of brain development., Methods: Focusing on the amygdala, a brain region whose dysfunction has been highly implicated in the social component of ASD, we mined publicly available gene expression databases to identify ASD-susceptibility genes expressed during human and mouse amygdala development. We found that a large cohort of known ASD susceptibility genes is expressed in the developing human and mouse amygdala. We further performed analysis of single-nucleus RNA-seq (snRNA-seq) data from microdissected amygdala tissue from five ASD and five control human postmortem brains ranging in age from 4 to 20 years to elucidate cell type specificity of amygdala-expressed genes and their dysregulation in ASD., Results: Our analyses revealed that of the high-ranking ASD susceptibility genes, 80 are expressed in both human and mouse amygdala during fetal to early postnatal stages of development. Our human snRNA-seq analyses revealed cohorts of genes with altered expression in the ASD amygdala postnatally, especially within excitatory neurons, with dysregulated expression of seven genes predicted from our datamining pipeline., Limitations: We were limited by the ages for which we were able to obtain human tissue; therefore, the results from our datamining pipeline approach will require validation, to the extent possible, in human tissue from earlier developmental stages., Conclusions: Our pipeline narrows down the number of amygdala-expressed genes possibly involved in the social pathophysiology of ASD. Our human single-nucleus gene expression analyses revealed that ASD is characterized by changes in gene expression in specific cell types in the early postnatal amygdala.
- Published
- 2020
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9. Clinical validation of the tempus xT next-generation targeted oncology sequencing assay.
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Beaubier N, Tell R, Lau D, Parsons JR, Bush S, Perera J, Sorrells S, Baker T, Chang A, Michuda J, Iguartua C, MacNeil S, Shah K, Ellis P, Yeatts K, Mahon B, Taxter T, Bontrager M, Khan A, Huether R, Lefkofsky E, and White KP
- Abstract
We developed and clinically validated a hybrid capture next generation sequencing assay to detect somatic alterations and microsatellite instability in solid tumors and hematologic malignancies. This targeted oncology assay utilizes tumor-normal matched samples for highly accurate somatic alteration calling and whole transcriptome RNA sequencing for unbiased identification of gene fusion events. The assay was validated with a combination of clinical specimens and cell lines, and recorded a sensitivity of 99.1% for single nucleotide variants, 98.1% for indels, 99.9% for gene rearrangements, 98.4% for copy number variations, and 99.9% for microsatellite instability detection. This assay presents a wide array of data for clinical management and clinical trial enrollment while conserving limited tissue., Competing Interests: CONFLICTS OF INTEREST All authors have a financial relationship as employees of Tempus Labs, Inc.
- Published
- 2019
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10. Safety and pharmacokinetics of Alpha-1 MP (Prolastin ® -C) in Japanese patients with alpha 1 -antitrypsin (AAT) deficiency.
- Author
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Seyama K, Nukiwa T, Sato T, Suzuki M, Konno S, Takahashi K, Nishimura M, Steinmann K, Sorrells S, Chen J, and Hayashi KI
- Subjects
- Aged, Asian People, Female, Humans, Infusions, Intravenous, Male, Middle Aged, Safety, Time Factors, alpha 1-Antitrypsin Deficiency metabolism, Serine Proteinase Inhibitors administration & dosage, Serine Proteinase Inhibitors pharmacokinetics, alpha 1-Antitrypsin administration & dosage, alpha 1-Antitrypsin pharmacokinetics, alpha 1-Antitrypsin Deficiency drug therapy
- Abstract
Background: Alpha
1 -Proteinase Inhibitor, Modified Process (Alpha-1 MP) is used for augmentation therapy in alpha1-antitrypsin deficiency (AATD), an extremely rare disease in Japan. Weekly doses of 60 mg/kg Alpha-1 MP have been shown to be safe and well tolerated in non-Japanese subjects, but the safety and pharmacokinetics (PK) have not been evaluated in Japanese subjects. The objectives of this study were to evaluate the safety and PK of 60 mg/kg Alpha-1 MP administered by weekly IV infusions over 8 weeks in Japanese subjects with AATD., Methods: This was a multicenter, open-label trial in Japanese adults aged ≥20 years with AATD. Samples for evaluation of serum alpha1 -PI concentration and PK parameters were collected at 10 time points until the seventh day after the last dose at Week 8: immediately before dosing, immediately after dosing (time 0), and 0.25, 2, 4, 8, 24, 48, 120, and 168 hours after dosing., Results: Four subjects were analyzed. The median tmax was 0.534 h. Mean ± SD values for t½ , Cmax , and AUC0-7days were 150.4 ± 36.18 h, 174.2 ± 30.51 mg/dL, and 14,913.2 ± 1633.45 mg*h/dL, respectively. Mean trough concentration at week 8 was 55.4 ± 7.23 mg/dL. Alpha-1 MP therapy was safe, with no serious adverse events or deaths reported. Two treatment-emergent adverse events of fatigue in one subject were considered to be possibly related., Conclusions: The PK and safety of Alpha-1 MP in Japanese subjects with AATD were consistent with the Alpha-1 MP profile in non-Japanese subjects (ClinicalTrials.gov: NCT02870309; JAPIC CTI: JapicCTI-163160)., (Copyright © 2018 The Japanese Respiratory Society. Published by Elsevier B.V. All rights reserved.)- Published
- 2019
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11. Spliceosomal components protect embryonic neurons from R-loop-mediated DNA damage and apoptosis.
- Author
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Sorrells S, Nik S, Casey MJ, Cameron RC, Truong H, Toruno C, Gulfo M, Lowe A, Jette C, Stewart RA, and Bowman TV
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- Animals, DNA Breaks, Double-Stranded, Genes, Essential, Mutation genetics, Neurons radiation effects, RNA Splicing genetics, RNA Splicing radiation effects, Radiation Tolerance genetics, Radiation Tolerance radiation effects, Radiation, Ionizing, Tumor Suppressor Protein p53 metabolism, Zebrafish embryology, Zebrafish Proteins metabolism, Apoptosis radiation effects, Cytoprotection radiation effects, DNA Damage, Neurons cytology, Neurons metabolism, Nucleic Acid Conformation, Spliceosomes metabolism, Zebrafish genetics
- Abstract
RNA splicing factors are essential for the viability of all eukaryotic cells; however, in metazoans some cell types are exquisitely sensitive to disruption of splicing factors. Neuronal cells represent one such cell type, and defects in RNA splicing factors can lead to neurodegenerative diseases. The basis for this tissue selectivity is not well understood owing to difficulties in analyzing the consequences of splicing factor defects in whole-animal systems. Here, we use zebrafish mutants to show that loss of spliceosomal components, including splicing factor 3b, subunit 1 ( sf3b1 ), causes increased DNA double-strand breaks and apoptosis in embryonic neurons. Moreover, these mutants show a concomitant accumulation of R-loops, which are non-canonical nucleic acid structures that promote genomic instability. Dampening R-loop formation by conditional induction of ribonuclease H1 in sf3b1 mutants reduced neuronal DNA damage and apoptosis. These findings show that splicing factor dysfunction leads to R-loop accumulation and DNA damage that sensitizes embryonic neurons to apoptosis. Our results suggest that diseases associated with splicing factor mutations could be susceptible to treatments that modulate R-loop levels., Competing Interests: Competing interestsThe authors declare no competing or financial interests., (© 2018. Published by The Company of Biologists Ltd.)
- Published
- 2018
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12. Bioequivalence of a Liquid Formulation of Alpha 1 -Proteinase Inhibitor Compared with Prolastin®-C (Lyophilized Alpha 1 -PI) in Alpha 1 -Antitrypsin Deficiency.
- Author
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Barker AF, Campos MA, Brantly ML, Stocks JM, Sandhaus RA, Lee D, Steinmann K, Lin J, and Sorrells S
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- Aged, Cross-Over Studies, Double-Blind Method, Drug Compounding, Enzyme Replacement Therapy, Female, Freeze Drying, Humans, Male, Middle Aged, Therapeutic Equivalency, alpha 1-Antitrypsin pharmacokinetics, alpha 1-Antitrypsin Deficiency drug therapy
- Abstract
This study evaluated the bioequivalence, safety, and immunogenicity of a new liquid formulation of human plasma-derived alpha
1 -proteinase inhibitor, Liquid Alpha1 -PI, compared with the Lyophilized Alpha1 -PI formulation (Prolastin®-C), for augmentation therapy in patients with alpha1 -antitrypsin deficiency (AATD). In this double-blind, randomized, 20-week crossover study, 32 subjects with AATD were randomized to receive 8 weekly infusions of 60 mg/kg of Liquid Alpha1 -PI or Lyophilized Alpha1 -PI. Serial blood samples were drawn for 7 days after the last dose followed by 8 weeks of the alternative treatment. The primary endpoint was bioequivalence at steady state, as measured by area under the concentration versus time curve from 0 to 7 days (AUC0-7 days ) postdose using an antigenic content assay. Bioequivalence was defined as 90% confidence interval (CI) for the ratio of the geometric least squares (LS) mean of AUC0-7 days for both products within the limits of 0.80 and 1.25. Safety and immunogenicity were assessed. Mean alpha1 -PI concentration versus time curves for both formulations were superimposable. Mean AUC0-7 days was 20 320 versus 19 838 mg × h/dl for Liquid Alpha1 -PI and Lyophilized Alpha1 -PI, respectively. The LS mean ratio of AUC0-7 days (90% CI) for Liquid Alpha1 -PI versus Lyophilized Alpha1 -PI was 1.05 (1.03-1.08), indicating bioequivalence. Liquid Alpha1 -PI was well tolerated and adverse events were consistent with Lyophilized Alpha1 -PI. Immunogenicity to either product was not detected. In conclusion, Liquid Alpha1 -PI is bioequivalent to Lyophilized Alpha1 -PI, with a similar safety profile. The liquid formulation would eliminate the need for reconstitution and shorten preparation time for patients receiving augmentation therapy for AATD.- Published
- 2017
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13. Coexisting and cooperating mutations in NPM1-mutated acute myeloid leukemia.
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Patel JL, Schumacher JA, Frizzell K, Sorrells S, Shen W, Clayton A, Jattani R, and Kelley TW
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- Cell Cycle Proteins genetics, Chromosomal Proteins, Non-Histone genetics, DNA Methylation genetics, High-Throughput Nucleotide Sequencing, Humans, Nucleophosmin, RNA Splicing genetics, Cohesins, Leukemia, Myeloid, Acute genetics, Mutation, Nuclear Proteins genetics
- Abstract
NPM1 insertion mutations represent a common recurrent genetic abnormality in acute myeloid leukemia (AML) patients. The frequency of these mutations varies from approximately 30% overall up to 50% in patients with a normal karyotype. Several recent studies have exploited advances in massively parallel sequencing technology to shed light on the complex genomic landscape of AML. We hypothesize that variant allele fraction (VAF) data derived from massively parallel sequencing studies may provide further insights into the clonal architecture and pathogenesis of NPM1-driven leukemogenesis. Diagnostic peripheral blood or bone marrow samples from NPM1-mutated AML patients (n=120) were subjected to targeted sequencing using a panel of fifty-seven genes known to be commonly mutated in myeloid malignancies. NPM1 mutations were always accompanied by additional mutations and NPM1 had the highest VAF in only one case. Nearly all NPM1-mutated AML patients showed concurrent mutations in genes involved in regulation of DNA methylation (DNMT3A, TET2, IDH1, IDH2), RNA splicing (SRSF2, SF3B1), or in the cohesin complex (RAD21, SMC1A, SMC3, STAG2). Mutations in these genes had higher median VAFs that were higher (40% or greater) than the co-existing NPM1 mutations (median VAF 16.8%). Mutations associated with cell signaling pathways (FLT3, NRAS, and PTPN11) are also frequently encountered in NPM1-mutated AML cases, but had relatively low VAFs (7.0-11.9%). No cases of NPM1-mutated AML with a concurrent IDH2
R172 mutation were observed, suggesting that these variants are mutually exclusive. Overall, these data suggest that NPM1 mutations are a secondary or late event in the pathogenesis of AML and are preceded by founder mutations in genes that may be associated with recently described preclinical states such as clonal hematopoiesis of indeterminate potential or clonal cytopenias of undetermined significance., (Copyright © 2017 Elsevier Ltd. All rights reserved.)- Published
- 2017
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14. SPARTA clinical trial design: exploring the efficacy and safety of two dose regimens of alpha1-proteinase inhibitor augmentation therapy in alpha1-antitrypsin deficiency.
- Author
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Sorrells S, Camprubi S, Griffin R, Chen J, and Ayguasanosa J
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- Absorptiometry, Photon methods, Adult, Aged, Biological Availability, Disease Progression, Dose-Response Relationship, Drug, Female, Humans, Lung physiopathology, Male, Middle Aged, Research Design, Respiratory Function Tests, Serine Proteinase Inhibitors administration & dosage, Serine Proteinase Inhibitors adverse effects, Serine Proteinase Inhibitors pharmacokinetics, Tomography, X-Ray Computed methods, Treatment Outcome, alpha 1-Antitrypsin Deficiency complications, alpha 1-Antitrypsin Deficiency diagnosis, alpha 1-Antitrypsin Deficiency physiopathology, Lung pathology, Pulmonary Emphysema diagnosis, Pulmonary Emphysema drug therapy, Pulmonary Emphysema etiology, alpha 1-Antitrypsin administration & dosage, alpha 1-Antitrypsin adverse effects, alpha 1-Antitrypsin pharmacokinetics, alpha 1-Antitrypsin Deficiency drug therapy
- Abstract
Background: Alpha1-antitrypsin deficiency (AATD) is an underdiagnosed genetic disorder that results in early-onset emphysema due to low serum levels of alpha1-proteinase inhibitor (alpha1-PI), leading to increased activity of tissue-damaging neutrophil elastase. Clinical outcomes of AATD may be improved by administering alpha1-PI augmentation therapy. Here, we describe the design of the ongoing Study of ProlAstin-c Randomized Therapy with Alpha-1 augmentation (SPARTA), a phase 3 trial designed to evaluate progression of lung tissue loss in patients with severe AATD receiving human alpha1-PI (Prolastin(®)-C) versus placebo, using whole-lung computed tomography (CT) densitometry., Study Design: SPARTA is a randomized, placebo-controlled trial assessing the efficacy and safety of two separate doses of Prolastin-C (60 and 120 mg/kg) administered weekly over 3 years in patients aged 18-70 years with a diagnosis of AATD and clinical evidence of pulmonary emphysema. The primary measure of efficacy (change from baseline whole-lung 15th percentile lung density [PD15]) will be determined by CT lung densitometry measured at total lung capacity. Secondary efficacy variables will be the evaluation of severe chronic obstructive pulmonary disease exacerbations, as defined by American Thoracic Society/European Respiratory Society criteria, and PD15 of the basal lung region using CT densitometry. Adverse events will be collected and documented., Conclusions: The SPARTA trial is designed to evaluate the long-term (3-year) efficacy of 2 separate doses of Prolastin-C for the treatment of emphysema in patients with AATD. Protocol number: GTi1201., Clinical Trials Identifier: NCT01983241., (Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2015
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15. Analysis of apoptosis in zebrafish embryos by whole-mount immunofluorescence to detect activated Caspase 3.
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Sorrells S, Toruno C, Stewart RA, and Jette C
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- Animals, Caspase 3 analysis, Embryo, Nonmammalian anatomy & histology, Embryo, Nonmammalian cytology, Enzyme Activation, Zebrafish metabolism, Apoptosis physiology, Caspase 3 metabolism, Embryo Culture Techniques methods, Fluorescent Antibody Technique methods, Zebrafish embryology
- Abstract
Whole-mount immunofluorescence to detect activated Caspase 3 (Casp3 assay) is useful to identify cells undergoing either intrinsic or extrinsic apoptosis in zebrafish embryos. The whole-mount analysis provides spatial information in regard to tissue specificity of apoptosing cells, although sectioning and/or colabeling is ultimately required to pinpoint the exact cell types undergoing apoptosis. The whole-mount Casp3 assay is optimized for analysis of fixed embryos between the 4-cell stage and 32 hr-post-fertilization and is useful for a number of applications, including analysis of zebrafish mutants and morphants, overexpression of mutant and wild-type mRNAs, and exposure to chemicals. Compared to acridine orange staining, which can identify apoptotic cells in live embryos in a matter of hours, Casp3 and TUNEL assays take considerably longer to complete (2-4 days). However, because of the dynamic nature of apoptotic cell formation and clearance, analysis of fixed embryos ensures accurate comparison of apoptotic cells across multiple samples at specific time points. We have also found the Casp3 assay to be superior to analysis of apoptotic cells by the whole-mount TUNEL assay in regard to cost and reliability. Overall, the Casp3 assay represents a robust, highly reproducible assay in which to analyze apoptotic cells in early zebrafish embryos.
- Published
- 2013
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16. Two independent regions of simian virus 40 T antigen increase CBP/p300 levels, alter patterns of cellular histone acetylation, and immortalize primary cells.
- Author
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Sáenz Robles MT, Shivalila C, Wano J, Sorrells S, Roos A, and Pipas JM
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- Acetylation, Amino Acid Motifs, Animals, Antigens, Polyomavirus Transforming genetics, CREB-Binding Protein genetics, Cells, Cultured, E1A-Associated p300 Protein genetics, Fibroblasts metabolism, Fibroblasts virology, Histones chemistry, Histones genetics, Humans, Polyomavirus Infections enzymology, Polyomavirus Infections genetics, Polyomavirus Infections virology, Simian virus 40 chemistry, Simian virus 40 genetics, Tumor Virus Infections enzymology, Tumor Virus Infections genetics, Tumor Virus Infections metabolism, Tumor Virus Infections virology, Antigens, Polyomavirus Transforming chemistry, Antigens, Polyomavirus Transforming metabolism, CREB-Binding Protein metabolism, Cell Transformation, Viral, E1A-Associated p300 Protein metabolism, Histones metabolism, Polyomavirus Infections metabolism, Simian virus 40 physiology
- Abstract
Simian virus 40 (SV40) large T antigen (SVT) interferes with normal cell regulation and thus has been used to identify cellular components controlling proliferation and homeostasis. We have previously shown that SVT-mediated transformation requires interaction with the histone acetyltransferases (HATs) CBP/p300 and now report that the ectopic expression of SVT in several cell types in vivo and in vitro results in a significant increase in the steady-state levels of CBP/p300. Furthermore, SVT-expressing cells contain higher levels of acetylated CBP/p300, a modification that has been linked to increased HAT activity. Concomitantly, the acetylation levels of histone residues H3K56 and H4K12 are markedly increased in SVT-expressing cells. Other polyomavirus-encoded large T antigens also increase the levels of CBP/p300 and sustain a rise in the acetylation levels of H3K56 and H4K12. SVT does not affect the transcription of CBP/p300, but rather, alters their overall levels through increasing the loading of CBP/p300 mRNAs onto polysomes. Two distinct regions within SVT, one located in the amino terminus and one in the carboxy terminus, can independently alter both the levels of CBP/p300 and the loading of CBP/p300 transcripts onto polysomes. Within the amino-terminal fragment, a functional J domain is necessary for increasing CBP/p300 and specific histone acetylation levels, as well as for immortalizing primary cells. These studies uncover the action of polyomavirus T antigens on cellular CBP/p300 and suggest that additional mechanisms are used by T antigens to induce cell immortalization and transformation.
- Published
- 2013
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17. Ccdc94 protects cells from ionizing radiation by inhibiting the expression of p53.
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Sorrells S, Carbonneau S, Harrington E, Chen AT, Hast B, Milash B, Pyati U, Major MB, Zhou Y, Zon LI, Stewart RA, Look AT, and Jette C
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- Animals, Apoptosis radiation effects, Embryonic Development radiation effects, Gene Expression Regulation, Genes, Recessive, Mutation, Neurons radiation effects, Radiation, Ionizing, Tumor Suppressor Protein p53 metabolism, Zebrafish Proteins metabolism, DNA Breaks, Double-Stranded radiation effects, Radiation Tolerance genetics, Tumor Suppressor Protein p53 genetics, Zebrafish embryology, Zebrafish genetics, Zebrafish Proteins genetics
- Abstract
DNA double-strand breaks (DSBs) represent one of the most deleterious forms of DNA damage to a cell. In cancer therapy, induction of cell death by DNA DSBs by ionizing radiation (IR) and certain chemotherapies is thought to mediate the successful elimination of cancer cells. However, cancer cells often evolve to evade the cytotoxicity induced by DNA DSBs, thereby forming the basis for treatment resistance. As such, a better understanding of the DSB DNA damage response (DSB-DDR) pathway will facilitate the design of more effective strategies to overcome chemo- and radioresistance. To identify novel mechanisms that protect cells from the cytotoxic effects of DNA DSBs, we performed a forward genetic screen in zebrafish for recessive mutations that enhance the IR-induced apoptotic response. Here, we describe radiosensitizing mutation 7 (rs7), which causes a severe sensitivity of zebrafish embryonic neurons to IR-induced apoptosis and is required for the proper development of the central nervous system. The rs7 mutation disrupts the coding sequence of ccdc94, a highly conserved gene that has no previous links to the DSB-DDR pathway. We demonstrate that Ccdc94 is a functional member of the Prp19 complex and that genetic knockdown of core members of this complex causes increased sensitivity to IR-induced apoptosis. We further show that Ccdc94 and the Prp19 complex protect cells from IR-induced apoptosis by repressing the expression of p53 mRNA. In summary, we have identified a new gene regulating a dosage-sensitive response to DNA DSBs during embryonic development. Future studies in human cancer cells will determine whether pharmacological inactivation of CCDC94 reduces the threshold of the cancer cell apoptotic response., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2012
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18. A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.
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Qi LL, Echalier B, Chao S, Lazo GR, Butler GE, Anderson OD, Akhunov ED, Dvorák J, Linkiewicz AM, Ratnasiri A, Dubcovsky J, Bermudez-Kandianis CE, Greene RA, Kantety R, La Rota CM, Munkvold JD, Sorrells SF, Sorrells ME, Dilbirligi M, Sidhu D, Erayman M, Randhawa HS, Sandhu D, Bondareva SN, Gill KS, Mahmoud AA, Ma XF, Miftahudin, Gustafson JP, Conley EJ, Nduati V, Gonzalez-Hernandez JL, Anderson JA, Peng JH, Lapitan NL, Hossain KG, Kalavacharla V, Kianian SF, Pathan MS, Zhang DS, Nguyen HT, Choi DW, Fenton RD, Close TJ, McGuire PE, Qualset CO, and Gill BS
- Subjects
- Genetic Markers, Ploidies, Quantitative Trait Loci, Sequence Alignment, Chromosome Mapping, Chromosomes, Plant genetics, Expressed Sequence Tags, Genes, Plant, Genome, Plant, Triticum genetics
- Abstract
Because of the huge size of the common wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) genome of 17,300 Mb, sequencing and mapping of the expressed portion is a logical first step for gene discovery. Here we report mapping of 7104 expressed sequence tag (EST) unigenes by Southern hybridization into a chromosome bin map using a set of wheat aneuploids and deletion stocks. Each EST detected a mean of 4.8 restriction fragments and 2.8 loci. More loci were mapped in the B genome (5774) than in the A (5173) or D (5146) genomes. The EST density was significantly higher for the D genome than for the A or B. In general, EST density increased relative to the physical distance from the centromere. The majority of EST-dense regions are in the distal parts of chromosomes. Most of the agronomically important genes are located in EST-dense regions. The chromosome bin map of ESTs is a unique resource for SNP analysis, comparative mapping, structural and functional analysis, and polyploid evolution, as well as providing a framework for constructing a sequence-ready, BAC-contig map of the wheat genome.
- Published
- 2004
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19. Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.
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Munkvold JD, Greene RA, Bermudez-Kandianis CE, La Rota CM, Edwards H, Sorrells SF, Dake T, Benscher D, Kantety R, Linkiewicz AM, Dubcovsky J, Akhunov ED, Dvorák J, Miftahudin, Gustafson JP, Pathan MS, Nguyen HT, Matthews DE, Chao S, Lazo GR, Hummel DD, Anderson OD, Anderson JA, Gonzalez-Hernandez JL, Peng JH, Lapitan N, Qi LL, Echalier B, Gill BS, Hossain KG, Kalavacharla V, Kianian SF, Sandhu D, Erayman M, Gill KS, McGuire PE, Qualset CO, and Sorrells ME
- Subjects
- Genome, Plant, Sequence Alignment, Chromosome Mapping, Chromosomes, Plant genetics, Genes, Plant, Oryza genetics, Triticum genetics
- Abstract
The focus of this study was to analyze the content, distribution, and comparative genome relationships of 996 chromosome bin-mapped expressed sequence tags (ESTs) accounting for 2266 restriction fragments (loci) on the homoeologous group 3 chromosomes of hexaploid wheat (Triticum aestivum L.). Of these loci, 634, 884, and 748 were mapped on chromosomes 3A, 3B, and 3D, respectively. The individual chromosome bin maps revealed bins with a high density of mapped ESTs in the distal region and bins of low density in the proximal region of the chromosome arms, with the exception of 3DS and 3DL. These distributions were more localized on the higher-resolution group 3 consensus map with intermediate regions of high-mapped-EST density on both chromosome arms. Gene ontology (GO) classification of mapped ESTs was not significantly different for homoeologous group 3 chromosomes compared to the other groups. A combined analysis of the individual bin maps using 537 of the mapped ESTs revealed rearrangements between the group 3 chromosomes. Approximately 232 (44%) of the consensus mapped ESTs matched sequences on rice chromosome 1 and revealed large- and small-scale differences in gene order. Of the group 3 mapped EST unigenes approximately 21 and 32% matched the Arabidopsis coding regions and proteins, respectively, but no chromosome-level gene order conservation was detected.
- Published
- 2004
- Full Text
- View/download PDF
20. Twice-daily versus thrice-daily clarithromycin in combination with ranitidine bismuth citrate in the eradication of Helicobacter pylori.
- Author
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Schwartz HI, Perschy TB, McSorley DJ, and Sorrells SC
- Subjects
- Adult, Anti-Bacterial Agents therapeutic use, Anti-Ulcer Agents therapeutic use, Bismuth adverse effects, Clarithromycin adverse effects, Double-Blind Method, Drug Therapy, Combination, Female, Humans, Male, Microbial Sensitivity Tests, Middle Aged, Ranitidine adverse effects, Ranitidine therapeutic use, Bismuth therapeutic use, Clarithromycin therapeutic use, Helicobacter Infections drug therapy, Helicobacter pylori drug effects, Ranitidine analogs & derivatives
- Abstract
Background: Ranitidine bismuth citrate (RBC), 400 mg bid for 4 weeks, plus clarithromycin, 500 mg tid, is a regimen approved by the US Food and Drug Administration for the eradication of Helicobacter pylori in patients with duodenal ulcers. Proof that the clarithromycin portion of the regimen could be given twice daily without loss of efficacy would reduce cost and improve patient compliance. The objective of this study was to compare the H. pylori eradication rates in patients who had duodenal ulcer and were randomly assigned to 4 weeks of treatment with RBC, 400 mg bid, in conjunction with 2 weeks of therapy with either clarithromycin, 500 mg tid, or clarithromycin, 500 mg bid., Patients and Methods: Patients who had a duodenal ulcer and were H. pylori-positive by at least two tests were randomly assigned to (1) RBC, 400 mg bid for 4 weeks, plus clarithromycin, 500 mg tid for 2 weeks, or (2) RBC, 400 mg bid for 4 weeks, plus clarithromycin, 500 mg bid for 2 weeks. H. pylori eradication was assessed 4 weeks after completion of RBC plus clarithromycin., Results: Three hundred eighty-three patients from 78 centers had a duodenal ulcer and were H. pylori-positive. The modified intent-to-treat (MITT) and the per-protocol (PP) eradication rates were statistically equivalent between the twice-daily (65% MITT, 74% PP) and thrice-daily (63% MITT, 73% PP) clarithromycin treatment regimens. Incidence and types of adverse events did not differ between the two groups., Conclusions: For eradicating H. pylori in patients with duodenal ulcer, clarithromycin, 500 mg bid for 2 weeks, with RBC, 400 mg bid for 4 weeks, is equivalent to clarithromycin, 500 mg tid with RBC. The potential enhancement of patient compliance, reduced cost of clarithromycin, and equivalent efficacy would support the use of twice-daily clarithromycin in triple-therapy regimens with RBC.
- Published
- 1999
- Full Text
- View/download PDF
21. Additional investigations fail to alter the diagnosis of irritable bowel syndrome in subjects fulfilling the Rome criteria.
- Author
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Hamm LR, Sorrells SC, Harding JP, Northcutt AR, Heath AT, Kapke GF, Hunt CM, and Mangel AW
- Subjects
- Adult, Colonic Diseases, Functional complications, Female, Humans, Lactose Intolerance complications, Lactose Intolerance diagnosis, Male, Middle Aged, Multicenter Studies as Topic, Colonic Diseases, Functional diagnosis
- Abstract
Objective: Irritable bowel syndrome (IBS) is diagnosed by the presence of a constellation of symptoms fulfilling the Manning or Rome Criteria, after exclusion of organic disease. To exclude other diagnoses that might contribute to the abdominal pain or bowel symptoms experienced by subjects with IBS, numerous screening algorithms have been advocated, incorporating lactose hydrogen breath tests, thyroid function tests, fecal ova and parasite determination, and colonic endoscopy/radiography. The utility of these tests in uncovering alternative diagnoses, other than IBS, was examined in 1452 patients., Methods: Data were combined from two large multinational studies of IBS patients. All patients exhibited symptoms meeting the Rome criteria for IBS for at least 6 months before study entry. If prior evaluation had been > 2 yr previously, patients underwent colonic endoscopy/radiography at study entry. In addition, thyroid function tests, fecal ova and parasite determination, and a lactose hydrogen breath test were performed., Results: Lactose malabsorption was diagnosed in 23% (256/1122) of patients. Colonic abnormalities were detected in 2% (7/306) of patients; in four patients, colonic inflammation (n = 3) or obstruction (n = 1) may have contributed to symptoms of abdominal pain or altered bowel habits. Abnormal thyroid-stimulating hormone levels were detected in 6% (67/1209) of patients, of whom half were hypothyroid and half were hyperthyroid. Positive fecal ova and parasite tests were noted in 2% (19/1154) of patients., Conclusions: Examination of screening tests in 1452 patients with an established history of IBS revealed an incidence of lactose malabsorption comparable to that in the general U.S. population and a low incidence of thyroid dysfunction, ova and parasite infestation, or colonic pathology. The limited detection rates, added costs, and inconvenience of these tests suggest that their routine use in the diagnostic evaluation of established IBS patients should be scrutinized.
- Published
- 1999
- Full Text
- View/download PDF
22. An objective method of compliance assessment with metered-dose inhalers.
- Author
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Nemec MA, Sorrells SC, Prihoda TJ, and Talbert RL
- Subjects
- Albuterol administration & dosage, Analysis of Variance, Evaluation Studies as Topic, Humans, Metaproterenol administration & dosage, Methods, Regression Analysis, Terbutaline administration & dosage, Nebulizers and Vaporizers, Patient Compliance
- Abstract
Evaluation of compliance with metered-dose inhalers (MDIs) is especially difficult. We investigated the correlation between serial weight change of the MDI canister and the number of doses delivered. Canister weight strongly correlated with number of activations for three different bronchodilators (metaproterenol, r2 = 0.9965; albuterol, r2 = 0.9984; terbutaline, r2 = 0.9913). To validate these results, a one-month trial designed to mimic patient use was conducted. Nine aerosol bronchodilator MDIs (three each of terbutaline, albuterol, and metaproterenol) were evaluated by three volunteers, each given one of each type of MDI. Number of activations were recorded in a diary and canisters were weighed weekly. At the end of the four-week period the number of activations were determined from weekly canister weight. Predicted activation numbers, calculated from both regression line and baseline weight, were compared to actual activation number. Statistical analysis was done using analysis of variance. Predicted number of activations for all three drugs ranged from 77 to 125 percent of observed and did not significantly differ depending on the type of bronchodilator (p = 0.3340). The method of prediction, regression intercept or baseline weight, led to significantly different predictions (p = 0.0569). The interaction between the method of prediction and type of bronchodilator was significant (p = 0.0197). Using either method, the actual number of doses dispensed can be predicted within 25 percent.
- Published
- 1989
- Full Text
- View/download PDF
23. Respiratory effects of high-dose butorphanol.
- Author
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Talbert RL, Peters JI, Sorrells SC, and Simmons RS
- Subjects
- Adult, Breath Tests, Butorphanol blood, Carbon Dioxide analysis, Dose-Response Relationship, Drug, Humans, Injections, Intravenous, Male, Spirometry, Tidal Volume, Butorphanol adverse effects, Morphinans adverse effects, Respiration drug effects
- Abstract
The effect of butorphanol on respiratory drive was assessed using a carbon dioxide response test (CRT). Eight male volunteers received 3 mg/70 kg of intravenous butorphanol every 30 min to a cumulative dose of 15 mg/70 kg (5 doses). Thirty minutes before the first butorphanol dose, each subject received normal saline to establish a baseline CRT. After each butorphanol dose, a CRT was repeated at 15 min to assess respiratory depression. Minute ventilation was plotted against PaCO2 to generate a regression line for saline and each dose. Slopes and intercepts for each line were calculated by least squares linear regression, and CRT displacement from saline was determined at each dose. The mean slope for each dose was not significantly different from the saline slope (p = 0.23-0.91). The mean displacement (+/- SEM) of the CRT from saline was greatest after the second dose (7.29 +/- 1.94 mm Hg) but not significantly different from the first or subsequent doses (p greater than 0.05). Butorphanol in doses of up to 15 mg/70 kg may have a 'ceiling effect' in respiratory depression.
- Published
- 1988
24. Loop transverse colostomy.
- Author
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Broadwell DC and Sorrells SL
- Subjects
- Equipment and Supplies, Humans, Patient Education as Topic, Colostomy nursing
- Published
- 1978
25. Effect of Vacutainer tubes on lidocaine protein binding.
- Author
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Sorrells SC, Lopez LM, Curry SH, and Pieper JA
- Subjects
- Blood Proteins metabolism, Humans, Protein Binding, Blood Specimen Collection instrumentation, Lidocaine blood, Rubber
- Published
- 1987
- Full Text
- View/download PDF
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