65 results on '"Sophia Apostolidou"'
Search Results
2. UKCTOCS update: applying insights of delayed effects in cancer screening trials to the long-term follow-up mortality analysis
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Matthew Burnell, Aleksandra Gentry-Maharaj, Steven J. Skates, Andy Ryan, Chloe Karpinskyj, Jatinderpal Kalsi, Sophia Apostolidou, Naveena Singh, Anne Dawnay, Robert Woolas, Lesley Fallowfield, Stuart Campbell, Alistair McGuire, Ian J. Jacobs, Mahesh Parmar, and Usha Menon
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UKCTOCS ,Follow-up ,Mortality analysis ,Ovarian cancer ,Cancer screening ,Delayed effect ,Medicine (General) ,R5-920 - Abstract
Abstract Background During trials that span decades, new evidence including progress in statistical methodology, may require revision of original assumptions. An example is the continued use of a constant-effect approach to analyse the mortality reduction which is often delayed in cancer-screening trials. The latter led us to re-examine our approach for the upcoming primary mortality analysis (2020) of long-term follow-up of the United Kingdom Collaborative Trial of Ovarian Cancer Screening (LTFU UKCTOCS), having initially (2014) used the proportional hazards (PH) Cox model. Methods We wrote to 12 experts in statistics/epidemiology/screening trials, setting out current evidence, the importance of pre-specification, our previous mortality analysis (2014) and three possible choices for the follow-up analysis (2020) of the mortality outcome: (A) all data (2001–2020) using the Cox model (2014), (B) new data (2015–2020) only and (C) all data (2001–2020) using a test that allows for delayed effects. Results Of 11 respondents, eight supported changing the 2014 approach to allow for a potential delayed effect (option C), suggesting various tests while three favoured retaining the Cox model (option A). Consequently, we opted for the Versatile test introduced in 2016 which maintains good power for early, constant or delayed effects. We retained the Royston-Parmar model to estimate absolute differences in disease-specific mortality at 5, 10, 15 and 18 years. Conclusions The decision to alter the follow-up analysis for the primary outcome on the basis of new evidence and using new statistical methodology for long-term follow-up is novel and has implications beyond UKCTOCS. There is an urgent need for consensus building on how best to design, test, estimate and report mortality outcomes from long-term randomised cancer screening trials. Trial registration ISRCTN22488978 . Registered on 6 April 2000.
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- 2021
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3. Completeness and accuracy of national cancer and death registration for outcome ascertainment in trials—an ovarian cancer exemplar
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Jatinderpal K. Kalsi, Andy Ryan, Aleksandra Gentry-Maharaj, Danielle Margolin-Crump, Naveena Singh, Matthew Burnell, Elizabeth Benjamin, Sophia Apostolidou, Mariam Habib, Susan Massingham, Chloe Karpinskyj, Robert Woolas, Martin Widschwendter, Lesley Fallowfield, Stuart Campbell, Steven Skates, Alistair McGuire, Max Parmar, Ian Jacobs, and Usha Menon
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Outcomes review ,Adjudication ,Randomised controlled trial ,Ovarian cancer ,Screening ,UKCTOCS ,Medicine (General) ,R5-920 - Abstract
Abstract Background There is a trend to increasing use of routinely collected health data to ascertain outcome measures in trials. We report on the completeness and accuracy of national ovarian cancer and death registration in the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS). Methods Of the 202,638 participants, 202,632 were successfully linked and followed through national cancer and death registries of Northern Ireland, Wales and England. Women with registrations of any of 19 pre-defined ICD-10 codes suggestive of tubo-ovarian cancer or notification of ovarian/tubal/peritoneal cancer from hospital episode statistics or trial sites were identified. Copies of hospital and primary care notes were retrieved and reviewed by an independent outcomes review committee. National registration of site and cause of death as ovarian/tubal/peritoneal cancer (C56/C57/C48) obtained up to 3 months after trial censorship was compared to that assigned by outcomes review (reference standard). Results Outcome review was undertaken in 3110 women on whom notification was received between 2001 and 2014. Ovarian cancer was confirmed in 1324 of whom 1125 had a relevant cancer registration. Sensitivity and specificity of ovarian/tubal/peritoneal cancer registration were 85.0% (1125/1324; 95% CI 83.7–86.2%) and 94.0% (1679/1786; 95% CI 93.2–94.8%), respectively. Of 2041 death registrations reviewed, 681 were confirmed to have a tubo-ovarian cancer of whom 605 had relevant death registration. Sensitivity and specificity were 88.8% (605/681; 95% CI 86.4–91.2%) and 96.7% (1482/1533, 95% CI 95.8–97.6%), respectively. When multiple electronic health record sources were considered, sensitivity for cancer site increased to 91.1% (1206/1324, 95% CI 89.4–92.5%) and for cause of death 94.0% (640/681, 95% CI 91.9–95.5%). Of 1232 with cancer registration, 8.7% (107/1232) were wrongly designated as ovarian/tubal/peritoneal cancers by the registry and 4.0% (47/1172) of confirmed tubo-ovarian cancers were mis-registered. In 656 with death registrations, 7.8% (51/656) were wrongly assigned as due to ovarian/tubal/peritoneal cancers while 6.2% (40/645) of confirmed tubo-ovarian cancer deaths were mis-registered. Conclusion Follow-up of trial participants for tubo-ovarian cancer using national registry data will result in incomplete ascertainment, particularly of the site due in part to the latency of registration. This can be reduced by using other routinely collected data such as hospital episode statistics. Central adjudication by experts though resource intensive adds value by improving the accuracy of diagnoses. Trial registration ISRCTN: ISRCTN22488978 . Registered on 6 April 2000
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- 2021
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4. The Enhanced Liver Fibrosis test is associated with liver-related outcomes in postmenopausal women with risk factors for liver disease
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Paul M. Trembling, Sophia Apostolidou, Aleksandra Gentry-Maharaj, Julie Parkes, Andy Ryan, Sudeep Tanwar, Matthew Burnell, Scott Harris, Usha Menon, and William M. Rosenberg
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Alcohol-related liver disease ,Non-alcoholic fatty liver disease ,Obesity ,Liver fibrosis ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background Chronic liver disease (CLD) is usually asymptomatic but earlier detection is critical to permit life-saving interventions for those at risk due to high alcohol consumption and increased body mass index (BMI). The aim of this study was to estimate the association between the Enhanced Liver Fibrosis (ELF) test and liver-related events (LRE) and its performance in predicting LRE in postmenopausal women with risk factors in a nested case-control study within the United Kingdom Trial of Ovarian Cancer Screening (UKCTOCS). Methods In a cohort of 95,126 we performed a case-control study measuring ELF in blinded samples from 173 participants with self-reported high alcohol use and / or BMI ≥25 kg/m2 comprising all 58 cases who developed LRE and 115 controls matched for age, alcohol and BMI who did not develop LRE during median follow-up of 8.5 years. Results Using Cox regression at an ELF threshold of 10.51 hazard ratios (HR) for LRE were 4.88 (95% confidence interval (CI) 2.37–10.03) (unadjusted model) and 4.62 (95% CI 2.12–10.08) (adjusted for deprivation and self-reported hypertension, heart disease, hypercholesterolaemia and diabetes). At a threshold of 9.8 HR for LRE were 2.21 (95% CI 1.22–3.97) (unadjusted model) and 2.18 (95% CI 1.19–4.01) (adjusted). ELF was evaluated as a time dependent variable by generating time-dependent Cox models; HRs at an ELF threshold of 10.51 were 1.94 (95% CI 1.10–3.39) (unadjusted) and 2.05 (95% CI 1.16–3.64) (adjusted) and at a threshold of 9.8 HRs were 1.85 (95% CI 1.09–3.15) (unadjusted) and 1.80 (95% CI 1.04–3.13) (adjusted). Area under the receiver operating characteristic curve for recruitment ELF predicting LRE was 0.58 (95% CI 0.49–0.68), and for second subsequent ELF 0.61 (95% CI 0.52–0.71). Conclusion This study demonstrates the association between ELF and CLD in postmenopausal women with risk factors for liver disease, creating the opportunity to intervene to reduce liver-related mortality and morbidity. Although larger studies are required, these results demonstrate the potential of ELF as a prognostic tool in health checks in primary care. Trial registration This study is nested in UKCTOCS. UKCTOCS is registered as an International Standard Randomised Controlled Trial, number ISRCTN22488978 . Registered 06/04/2000.
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- 2020
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5. Modifying inter-cistronic sequence significantly enhances IRES dependent second gene expression in bicistronic vector: Construction of optimised cassette for gene therapy of familial hypercholesterolemia
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Faisal A. Al-Allaf, Zainularifeen Abduljaleel, Mohammad Athar, Mohiuddin M. Taher, Wajahatullah Khan, Huseyin Mehmet, Mukaddes Colakogullari, Sophia Apostolidou, Brian Bigger, Simon Waddington, Charles Coutelle, Michael Themis, Mohammed N. Al-Ahdal, Futwan A. Al-Mohanna, Zuhair N. Al-Hassnan, and Abdellatif Bouazzaoui
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Genetics ,QH426-470 - Abstract
Internal ribosome entry site (IRES) sequences have become a valuable tool in the construction of gene transfer and therapeutic vectors for multi-cistronic gene expression from a single mRNA transcript. The optimal conditions for effective use of this sequence to construct a functional expression vector are not precisely defined but it is generally assumed that the internal ribosome entry site dependent expression of the second gene in such as cassette is less efficient than the cap-dependent expression of the first gene. Mainly tailoring inter-cistronic sequence significantly enhances IRES dependent second gene expression in bicistronic vector further in construction of optimised cassette for gene therapy of familial hypercholesterolemia. We tailored the size of the inter-cistronic spacer sequence at the 5′ region of the internal ribosome entry site sequence using sequential deletions and demonstrated that the expression of the 3′ gene can be significantly increased to similar levels as the cap-dependent expression of the 5’ gene. Maximum expression efficiency of the downstream gene was obtained when the spacer is composed of 18–141 base pairs. In this case a single mRNA transcriptional unit containing both the first and the second Cistron was detected. Whilst constructs with spacer sequences of 216 bp or longer generate a single transcriptional unit containing only the first Cistron. This suggests that long spacers may affect transcription termination. When the spacer is 188 bp, both transcripts were produced simultaneously in most transfected cells, while a fraction of them expressed only the first but not the second gene. Expression analyses of vectors containing optimised cassettes clearly confirm that efficiency of gene transfer and biological activity of the expressed transgenic proteins in the transduced cells can be achieved. Furthermore, Computational analysis was carried out by molecular dynamics (MD) simulation to determine the most emerges as viable containing specific binding site and bridging of 5′ and 3′ ends involving direct RNA-RNA contacts and RNA-protein interactions. These results provide a mechanistic basis for translation stimulation and RNA resembling for the synergistic stimulation of cap-dependent translation. Keywords: Internal ribosome entry site, IRES, Gene therapy, Inter-cistronic sequences, MD simulation, Protein structure modeling, Familial hypercholesterolemia
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- 2019
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6. Risk of chronic liver disease in post-menopausal women due to body mass index, alcohol and their interaction: a prospective nested cohort study within the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
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Paul M Trembling, Sophia Apostolidou, Aleksandra Gentry-Maharaj, Julie Parkes, Andy Ryan, Sudeep Tanwar, Matthew Burnell, Ian Jacobs, Usha Menon, and William M. Rosenberg
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Chronic liver disease ,Cirrhosis ,Alcohol ,Body mass index ,Obesity ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background We investigated the risk of chronic liver disease (CLD) due to alcohol consumption and body mass index (BMI) and the effects of their interaction in a prospective cohort study of women recruited to the UKCTOCS trial. Methods 95,126 post-menopausal women without documented CLD were stratified into 12 groups defined by combinations of BMI (normal, overweight, obese) and alcohol consumption (none,
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- 2017
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7. An epigenetic signature in peripheral blood predicts active ovarian cancer.
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Andrew E Teschendorff, Usha Menon, Aleksandra Gentry-Maharaj, Susan J Ramus, Simon A Gayther, Sophia Apostolidou, Allison Jones, Matthias Lechner, Stephan Beck, Ian J Jacobs, and Martin Widschwendter
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Medicine ,Science - Abstract
BACKGROUND:Recent studies have shown that DNA methylation (DNAm) markers in peripheral blood may hold promise as diagnostic or early detection/risk markers for epithelial cancers. However, to date no study has evaluated the diagnostic and predictive potential of such markers in a large case control cohort and on a genome-wide basis. PRINCIPAL FINDINGS:By performing genome-wide DNAm profiling of a large ovarian cancer case control cohort, we here demonstrate that active ovarian cancer has a significant impact on the DNAm pattern in peripheral blood. Specifically, by measuring the methylation levels of over 27,000 CpGs in blood cells from 148 healthy individuals and 113 age-matched pre-treatment ovarian cancer cases, we derive a DNAm signature that can predict the presence of active ovarian cancer in blind test sets with an AUC of 0.8 (95% CI (0.74-0.87)). We further validate our findings in another independent set of 122 post-treatment cases (AUC = 0.76 (0.72-0.81)). In addition, we provide evidence for a significant number of candidate risk or early detection markers for ovarian cancer. Furthermore, by comparing the pattern of methylation with gene expression data from major blood cell types, we here demonstrate that age and cancer elicit common changes in the composition of peripheral blood, with a myeloid skewing that increases with age and which is further aggravated in the presence of ovarian cancer. Finally, we show that most cancer and age associated methylation variability is found at CpGs located outside of CpG islands. SIGNIFICANCE:Our results underscore the potential of DNAm profiling in peripheral blood as a tool for detection or risk-prediction of epithelial cancers, and warrants further in-depth and higher CpG coverage studies to further elucidate this role.
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- 2009
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8. Epigenotyping in peripheral blood cell DNA and breast cancer risk: a proof of principle study.
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Martin Widschwendter, Sophia Apostolidou, Elke Raum, Dietrich Rothenbacher, Heidi Fiegl, Usha Menon, Christa Stegmaier, Ian J Jacobs, and Hermann Brenner
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Medicine ,Science - Abstract
BackgroundEpigenetic changes are emerging as one of the most important events in carcinogenesis. Two alterations in the pattern of DNA methylation in breast cancer (BC) have been previously reported; active estrogen receptor-alpha (ER-alpha) is associated with decreased methylation of ER-alpha target (ERT) genes, and polycomb group target (PCGT) genes are more likely than other genes to have promoter DNA hypermethylation in cancer. However, whether DNA methylation in normal unrelated cells is associated with BC risk and whether these imprints can be related to factors which can be modified by the environment, is unclear.Methodology/principal findingsUsing quantitative methylation analysis in a case-control study (n = 1,083) we found that DNA methylation of peripheral blood cell DNA provides good prediction of BC risk. We also report that invasive ductal and invasive lobular BC is characterized by two different sets of genes, the latter particular by genes involved in the differentiation of the mesenchyme (PITX2, TITF1, GDNF and MYOD1). Finally we demonstrate that only ERT genes predict ER positive BC; lack of peripheral blood cell DNA methylation of ZNF217 predicted BC independent of age and family history (odds ratio 1.49; 95% confidence interval 1.12-1.97; P = 0.006) and was associated with ER-alpha bioactivity in the corresponding serum.Conclusion/significanceThis first large-scale epigenotyping study demonstrates that DNA methylation may serve as a link between the environment and the genome. Factors that can be modulated by the environment (like estrogens) leave an imprint in the DNA of cells that are unrelated to the target organ and indicate the predisposition to develop a cancer. Further research will need to demonstrate whether DNA methylation profiles will be able to serve as a new tool to predict the risk of developing chronic diseases with sufficient accuracy to guide preventive measures.
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- 2008
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9. Supplementary Figure S3. from Decreased Serum Thrombospondin-1 Levels in Pancreatic Cancer Patients Up to 24 Months Prior to Clinical Diagnosis: Association with Diabetes Mellitus
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Eithne Costello, John P. Neoptolemos, John F. Timms, Robert Sutton, William Greenhalf, B. Kevin Park, David A. Tuveson, Stephen P. Pereira, Fiona Campbell, Trevor Cox, Usha Menon, Ian J. Jacobs, Evangelia-O Fourkala, Aleksandra Gentry-Maharaj, Sophia Apostolidou, Darragh P. O'Brien, Rosalind E. Jenkins, Lucy Oldfield, Anthony Evans, Victoria L. Elliott, and Claire Jenkinson
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Detection of CA1-9 by ELISA in (A) individual time to diagnosis groups and (B) diagnosed samples and controls.
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- 2023
10. Supplementary Table S2. from Decreased Serum Thrombospondin-1 Levels in Pancreatic Cancer Patients Up to 24 Months Prior to Clinical Diagnosis: Association with Diabetes Mellitus
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Eithne Costello, John P. Neoptolemos, John F. Timms, Robert Sutton, William Greenhalf, B. Kevin Park, David A. Tuveson, Stephen P. Pereira, Fiona Campbell, Trevor Cox, Usha Menon, Ian J. Jacobs, Evangelia-O Fourkala, Aleksandra Gentry-Maharaj, Sophia Apostolidou, Darragh P. O'Brien, Rosalind E. Jenkins, Lucy Oldfield, Anthony Evans, Victoria L. Elliott, and Claire Jenkinson
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Peptides and their fragment ions used in MRM assays for TSP-1.
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- 2023
11. Supplementary Table 1, Figures 1 - 3 from Serum CA19-9 Is Significantly Upregulated up to 2 Years before Diagnosis with Pancreatic Cancer: Implications for Early Disease Detection
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John F. Timms, Stephen P. Pereira, Eithne Costello, Usha Menon, Ian J. Jacobs, Ross C. Smith, Alexey Zaikin, Anne Dawnay, Richard Gunu, Oleg Blyuss, Stephane Camuzeaux, Evangelia-Ourania Fourkala, Sophia Apostolidou, Aleksandra Gentry-Maharaj, Claire Jenkinson, Neomal S. Sandanayake, and Darragh P. O'Brien
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PDF file - 206K, Table S1 Numbers of test positive cases and controls using CA19-9 37 U/mL and CA125 30 U/mL cut-offs Figure S1 Scatter plots showing distribution of CA19-9, CA125, CEACAM1 and REG3A levels against time to diagnosis for discovery set. Zero represents the point of clinical diagnosis. Figure S2 Examples of CA19-9 and CA125 levels in individual cases with serial/longitudinal samples. Figure S3 Box and whisker plots showing serum levels of CA19-9 and CA125 for case control validation samples grouped into different time to diagnosis groups. Whisker limits represent the 5th and 95th percentiles, the box limits represent interquartile range, the horizontal line the median and the cross the mean. Case and control groups were compared using the Mann-Whitney test; significant P values (
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- 2023
12. Data from Serum CA19-9 Is Significantly Upregulated up to 2 Years before Diagnosis with Pancreatic Cancer: Implications for Early Disease Detection
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John F. Timms, Stephen P. Pereira, Eithne Costello, Usha Menon, Ian J. Jacobs, Ross C. Smith, Alexey Zaikin, Anne Dawnay, Richard Gunu, Oleg Blyuss, Stephane Camuzeaux, Evangelia-Ourania Fourkala, Sophia Apostolidou, Aleksandra Gentry-Maharaj, Claire Jenkinson, Neomal S. Sandanayake, and Darragh P. O'Brien
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Purpose: Biomarkers for the early detection of pancreatic cancer are urgently needed. The primary objective of this study was to evaluate whether increased levels of serum CA19-9, CA125, CEACAM1, and REG3A are present before clinical presentation of pancreatic cancer and to assess the performance of combined markers for early detection and prognosis.Experimental Design: This nested case–control study within the UKCTOCS included 118 single and 143 serial serum samples from 154 postmenopausal women who were subsequently diagnosed with pancreatic cancer and 304 matched noncancer controls. Samples were split randomly into independent training and test sets. CA19-9, CA125, CEACAM1, and REG3A were measured using ELISA and/or CLIA. Performance of markers to detect cancers at different times before diagnosis and for prognosis was evaluated.Results: At 95% specificity, CA19-9 (>37 U/mL) had a sensitivity of 68% up to 1 year, and 53% up to 2 years before diagnosis. Combining CA19-9 and CA125 improved sensitivity as CA125 was elevated (>30 U/mL) in approximately 20% of CA19-9–negative cases. CEACAM1 and REG3A were late markers adding little in combined models. Average lead times of 20 to 23 months were estimated for test-positive cases. Prediagnostic levels of CA19-9 and CA125 were associated with poor overall survival (HR, 2.69 and 3.15, respectively).Conclusions: CA19-9 and CA125 have encouraging sensitivity for detecting preclinical pancreatic cancer, and both markers can be used as prognostic tools. This work challenges the prevailing view that CA19-9 is upregulated late in the course of pancreatic cancer development. Clin Cancer Res; 21(3); 622–31. ©2014 AACR.
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- 2023
13. SUPPLEMENTARY DATA from Decreased Serum Thrombospondin-1 Levels in Pancreatic Cancer Patients Up to 24 Months Prior to Clinical Diagnosis: Association with Diabetes Mellitus
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Eithne Costello, John P. Neoptolemos, John F. Timms, Robert Sutton, William Greenhalf, B. Kevin Park, David A. Tuveson, Stephen P. Pereira, Fiona Campbell, Trevor Cox, Usha Menon, Ian J. Jacobs, Evangelia-O Fourkala, Aleksandra Gentry-Maharaj, Sophia Apostolidou, Darragh P. O'Brien, Rosalind E. Jenkins, Lucy Oldfield, Anthony Evans, Victoria L. Elliott, and Claire Jenkinson
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Supplementary Legends
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- 2023
14. Data from Decreased Serum Thrombospondin-1 Levels in Pancreatic Cancer Patients Up to 24 Months Prior to Clinical Diagnosis: Association with Diabetes Mellitus
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Eithne Costello, John P. Neoptolemos, John F. Timms, Robert Sutton, William Greenhalf, B. Kevin Park, David A. Tuveson, Stephen P. Pereira, Fiona Campbell, Trevor Cox, Usha Menon, Ian J. Jacobs, Evangelia-O Fourkala, Aleksandra Gentry-Maharaj, Sophia Apostolidou, Darragh P. O'Brien, Rosalind E. Jenkins, Lucy Oldfield, Anthony Evans, Victoria L. Elliott, and Claire Jenkinson
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Purpose: Identification of serum biomarkers enabling earlier diagnosis of pancreatic ductal adenocarcinoma (PDAC) could improve outcome. Serum protein profiles in patients with preclinical disease and at diagnosis were investigated.Experimental Design: Serum from cases up to 4 years prior to PDAC diagnosis and controls (UKCTOCS, n = 174) were studied, alongside samples from patients diagnosed with PDAC, chronic pancreatitis, benign biliary disease, type 2 diabetes mellitus, and healthy subjects (n = 298). Isobaric tags for relative and absolute quantification (iTRAQ) enabled comparisons of pooled serum from a test set (n = 150). Validation was undertaken using multiple reaction monitoring (MRM) and/or Western blotting in all 472 human samples and samples from a KPC mouse model.Results: iTRAQ identified thrombospondin-1 (TSP-1) as reduced preclinically and in diagnosed samples. MRM confirmed significant reduction in levels of TSP-1 up to 24 months prior to diagnosis. A combination of TSP-1 and CA19-9 gave an AUC of 0.86, significantly outperforming both markers alone (0.69 and 0.77, respectively; P < 0.01). TSP-1 was also decreased in PDAC patients compared with healthy controls (P < 0.05) and patients with benign biliary obstruction (P < 0.01). Low levels of TSP-1 correlated with poorer survival, preclinically (P < 0.05) and at clinical diagnosis (P < 0.02). In PDAC patients, reduced TSP-1 levels were more frequently observed in those with confirmed diabetes mellitus (P < 0.01). Significantly lower levels were also observed in PDAC patients with diabetes compared with individuals with type 2 diabetes mellitus (P = 0.01).Conclusions: Circulating TSP-1 levels decrease up to 24 months prior to diagnosis of PDAC and significantly enhance the diagnostic performance of CA19-9. The influence of diabetes mellitus on biomarker behavior should be considered in future studies. Clin Cancer Res; 22(7); 1734–43. ©2015 AACR.
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- 2023
15. Data from FBXW7/hCDC4 Is a General Tumor Suppressor in Human Cancer
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Charles Spruck, Olle Sangfelt, Martin Widschwendter, Steven I. Reed, Dan Grander, Hans Nordgren, Per Sangfelt, Fredrik Petersson, Susanne Egyhazi, Johan Hansson, Mohammad Reza Zali, Babak Noori Nayer, Sepideh Zabihi Nejad, Markus Dagnell, Martin Corcoran, Elisabeth Mueller-Holzner, Christian Marth, Dimitra Dofou, Heidi Fiegl, Diana Cepeda, Alena Maljukova, Kathleen Klotz, Sophia Apostolidou, Natalie von der Lehr, Dahui Sun, and Shahab Akhoondi
- Abstract
The ubiquitin-proteasome system is a major regulatory pathway of protein degradation and plays an important role in cellular division. Fbxw7 (or hCdc4), a member of the F-box family of proteins, which are substrate recognition components of the multisubunit ubiquitin ligase SCF (Skp1-Cdc53/Cullin-F-box-protein), has been shown to mediate the ubiquitin-dependent proteolysis of several oncoproteins including cyclin E1, c-Myc, c-Jun, and Notch. The oncogenic potential of Fbxw7 substrates, frequent allelic loss in human cancers, and demonstration that mutation of FBXW7 cooperates with p53 in mouse tumorigenesis have suggested that Fbxw7 could function as a tumor suppressor in human cancer. Here, we carry out an extensive genetic screen of primary tumors to evaluate the role of FBXW7 as a tumor suppressor in human tumorigenesis. Our results indicate that FBXW7 is inactivated by mutation in diverse human cancer types with an overall mutation frequency of ∼6%. The highest mutation frequencies were found in tumors of the bile duct (cholangiocarcinomas, 35%), blood (T-cell acute lymphocytic leukemia, 31%), endometrium (9%), colon (9%), and stomach (6%). Approximately 43% of all mutations occur at two mutational “hotspots,” which alter Arg residues (Arg465 and Arg479) that are critical for substrate recognition. Furthermore, we show that Fbxw7Arg465 hotspot mutant can abrogate wild-type Fbxw7 function through a dominant negative mechanism. Our study is the first comprehensive screen of FBXW7 mutations in various human malignancies and shows that FBXW7 is a general tumor suppressor in human cancer. [Cancer Res 2007;67(19):9006–12]
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- 2023
16. Supplementary Table 1 from FBXW7/hCDC4 Is a General Tumor Suppressor in Human Cancer
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Charles Spruck, Olle Sangfelt, Martin Widschwendter, Steven I. Reed, Dan Grander, Hans Nordgren, Per Sangfelt, Fredrik Petersson, Susanne Egyhazi, Johan Hansson, Mohammad Reza Zali, Babak Noori Nayer, Sepideh Zabihi Nejad, Markus Dagnell, Martin Corcoran, Elisabeth Mueller-Holzner, Christian Marth, Dimitra Dofou, Heidi Fiegl, Diana Cepeda, Alena Maljukova, Kathleen Klotz, Sophia Apostolidou, Natalie von der Lehr, Dahui Sun, and Shahab Akhoondi
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Supplementary Table 1 from FBXW7/hCDC4 Is a General Tumor Suppressor in Human Cancer
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- 2023
17. Why Did Downstaging in the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) Not Result in a Mortality Benefit: Exploratory Analysis of a Randomised Controlled Trial
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Usha Menon, Aleksandra Gentry-Maharaj, Matthew Burnell, Andy Ryan, Naveena Singh, Ranjit Manchanda, Jatinderpal K. Kalsi, Robert Woolas, Rupali Arora, Laura Casey, Anne Dawnay, Aarti Sharma, Karin Williamson, Sophia Apostolidou, Lesley Fallowfield, Alistair McGuire, Stuart Campbell, Steven J. Skates, Ian J. Jacobs, and Mahesh KB Parmar
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- 2023
18. Serial endometrial thickness and risk of non‐endometrial hormone‐dependent cancers in postmenopausal women in UK Collaborative Trial of Ovarian Cancer Screening
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Ian Jacobs, Jatinderpal Kalsi, Stuart Campbell, Matthew Burnell, Mahesh K. B. Parmar, Usha Menon, Aleksandra Gentry-Maharaj, Clara Helene Glazer, Sophia Apostolidou, Chloe Karpinskyj, and Andy Ryan
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Oncology ,Lung Neoplasms ,medicine.medical_treatment ,Information Storage and Retrieval ,transvaginal ultrasound ,Endometrium ,0302 clinical medicine ,Obstetrics and gynaecology ,Risk Factors ,Neoplasms ,Registries ,030212 general & internal medicine ,Early Detection of Cancer ,Randomized Controlled Trials as Topic ,Ultrasonography ,Ovarian Neoplasms ,030219 obstetrics & reproductive medicine ,Radiological and Ultrasound Technology ,Hazard ratio ,Obstetrics and Gynecology ,General Medicine ,Middle Aged ,Original Papers ,Postmenopause ,ovarian cancer ,cumulative estrogen ,Endometrial Hyperplasia ,Vagina ,Female ,medicine.medical_specialty ,Breast Neoplasms ,cancer biomarker ,03 medical and health sciences ,Breast cancer ,breast cancer ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Risk factor ,Lung cancer ,Aged ,Original Paper ,Hysterectomy ,business.industry ,endometrial thickness ,joint models ,Cancer ,Estrogens ,medicine.disease ,United Kingdom ,lung cancer ,Reproductive Medicine ,business ,Ovarian cancer - Abstract
Objective Estrogen is a well‐established risk factor for various cancers. It causes endometrial proliferation, which is assessed routinely as endometrial thickness (ET) using transvaginal ultrasound (TVS). Only one previous study, restricted to endometrial and breast cancer, has considered ET and the risk of non‐endometrial cancer. The aim of this study was to explore the association between baseline and serial ET measurements and nine non‐endometrial hormone‐sensitive cancers, in postmenopausal women, using contemporary statistical methodology that attempts to minimize the biases typical of endogenous serial data. Methods This was a cohort study nested within the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS). In the ultrasound arm of UKCTOCS, 50639 postmenopausal women, aged 50–74, underwent annual TVS examination, of whom 38 105 had a valid ET measurement, no prior hysterectomy and complete covariate data, and were included in this study. All women were followed up through linkage to national cancer registries. The effect of ET on the risk of six estrogen‐dependent cancers (breast, ovarian, colorectal, bladder, lung and pancreatic) was assessed using joint models for longitudinal biomarker and time‐to‐event data, and Cox models were used to assess the association between baseline ET measurement and these six cancers in addition to liver cancer, gastric cancer and non‐Hodgkin's lymphoma (NHL). All models were adjusted for current hormone‐replacement therapy (HRT) use, body mass index, age at last menstrual period, parity and oral contraceptive pill use. Results The 38 105 included women had a combined total of 267 567 (median, 8; interquartile range, 5–9) valid ET measurements. During a combined total of 407 838 (median, 10.9) years of follow‐up, 1398 breast, 351 endometrial, 381 lung, 495 colorectal, 222 ovarian, 94 pancreatic, 79 bladder, 62 gastric, 38 liver cancers and 52 NHLs were registered. Using joint models, a doubling of ET increased significantly the risk of breast (hazard ratio (HR), 1.21; 95% CI, 1.09–1.36; P = 0.001), ovarian (HR, 1.39; 95% CI, 1.06–1.82; P = 0.018) and lung (HR, 1.25; 95% CI, 1.02–1.54; P = 0.036) cancers. There were no statistically significant associations between ET and the remaining six cancers. Conclusion Postmenopausal women with high/increasing ET on TVS are at increased risk of breast, ovarian and lung cancer. It is important that clinicians are aware of these risks, as TVS is a common investigation. © 2019 The Authors. Ultrasound in Obstetrics & Gynecology published by John Wiley & Sons Ltd on behalf of the International Society of Ultrasound in Obstetrics and Gynecology.
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- 2020
19. Ovarian cancer symptoms, routes to diagnosis and survival – Population cohort study in the ‘no screen’ arm of the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
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Matthew Burnell, Stuart Campbell, Andy Ryan, Mahesh K. B. Parmar, Alistair McGuire, Aleksandra Gentry-Maharaj, Usha Menon, Chloe Karpinskyj, Christina Neophytou, Robert Woolas, Tim Mould, Jatinderpal Kalsi, Sophia Apostolidou, Naveena Singh, Lesley Fallowfield, Steven J. Skates, Ian Jacobs, James Dilley, and Martin Widschwendter
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Abdominal pain ,Survival ,Population ,Disease ,Carcinoma, Ovarian Epithelial ,Article ,NICE ,Cohort Studies ,03 medical and health sciences ,0302 clinical medicine ,Bloating ,Ovarian cancer ,Internal medicine ,medicine ,Humans ,Stage (cooking) ,education ,Early Detection of Cancer ,Randomized Controlled Trials as Topic ,Ovarian Neoplasms ,education.field_of_study ,RC0254 Neoplasms. Tumors. Oncology (including Cancer) ,business.industry ,Obstetrics and Gynecology ,Cancer ,Routes to diagnosis ,Middle Aged ,medicine.disease ,Prognosis ,United Kingdom ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cohort ,Symptoms ,RA Public aspects of medicine ,GOFF index ,UKCTOCS ,Female ,medicine.symptom ,business - Abstract
Objective There are widespread efforts to increase symptom awareness of ‘pelvic/abdominal pain, increased abdominal size/bloating, difficulty eating/feeling full and urinary frequency/urgency’ in an attempt to diagnose ovarian cancer earlier. Long-term survival of women with these symptoms adjusted for known prognostic factors is yet to be determined. This study explored the association of symptoms, routes and interval to diagnosis and long-term survival in a population-based cohort of postmenopausal women diagnosed with invasive epithelial tubo-ovarian cancer (iEOC) in the ‘no screen’ (control) UKCTOCS arm. Methods Of 101,299 women in the control arm, 574 were confirmed on outcome review to have iEOC between randomisation (2001–2005) and 31 December 2014. Data was extracted from medical notes and electronic records. A multivariable model was fitted for individual symptoms, time interval from symptom onset to diagnosis, route to diagnosis, speciality, morphological Type, age at diagnosis, year of diagnosis (period effect), stage, primary treatment, and residual disease. Results Women presenting with symptoms listed in the NICE guidelines (HR1.48, 95%CI1.16–1.89, p = 0.001) or the modified Goff Index (HR1·68, 95%CI1·32–2.13, p, Highlights • This study explored the association of symptoms of ovarian cancer, interval and route to diagnosis with survival. • Focus on ‘high alert’ symptoms: pelvic/abdominal pain, increase abdominal size/bloating and difficulty eating/feeling full • The ovarian cancer ‘high alert’ symptom complexes identify postmenopausal women with a significantly poorer prognosis. • The study could not however exclude the possibility of better outcomes in those who are aware and acted on these symptoms.
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- 2020
20. Association of hysterectomy and invasive epithelial ovarian and tubal cancer: A cohort study within UKCTOCS
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Usha Menon, Naveena Singh, Aarti Sharma, Stuart Campbell, Jatinderpal Kalsi, Sophia Apostolidou, Chloe Karpinskyj, Aleksandra Gentry-Maharaj, Ranjit Manchanda, Andy Ryan, Henry Taylor, Robert Woolas, Ian Jacobs, Julie Taylor, Matthew Burnell, and Mahesh K. B. Parmar
- Subjects
medicine.medical_specialty ,medicine.medical_treatment ,Population ,Northern Ireland ,Carcinoma, Ovarian Epithelial ,Hysterectomy ,State Medicine ,Cohort Studies ,Median follow-up ,Risk Factors ,Surveys and Questionnaires ,Medicine ,Fallopian Tube Neoplasms ,Humans ,Prospective Studies ,education ,Prospective cohort study ,Aged ,Ovarian Neoplasms ,education.field_of_study ,Wales ,business.industry ,Obstetrics ,Hazard ratio ,Obstetrics and Gynecology ,Cancer ,Middle Aged ,medicine.disease ,female genital diseases and pregnancy complications ,England ,Female ,business ,Ovarian cancer ,Cohort study - Abstract
OBJECTIVE To investigate the association between hysterectomy with conservation of one or both adnexa and ovarian and tubal cancer. DESIGN Prospective cohort study. SETTING Thirteen NHS Trusts in England, Wales and Northern Ireland. POPULATION A total of 202 506 postmenopausal women recruited between 2001 and 2005 to the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) and followed up until 31 December 2014. METHODS Multiple sources (questionnaires, hospital notes, Hospital Episodes Statistics, national cancer/death registries, ultrasound reports) were used to obtain accurate data on hysterectomy (with conservation of one or both adnexa) and outcomes censored at bilateral oophorectomy, death, ovarian/tubal cancer diagnosis, loss to follow up or 31 December 2014. Cox proportional hazards regression models were used to assess the association. MAIN OUTCOME MEASURES Invasive epithelial ovarian and tubal cancer (WHO 2014) on independent outcome review. RESULTS Hysterectomy with conservation of one or both adnexa was reported in 41 912 (20.7%; 41 912/202 506) women. Median follow up was 11.1 years (interquartile range 9.96-12.04), totalling >2.17 million woman-years. Among women who had undergone hysterectomy, 0.55% (231/41 912) were diagnosed with ovarian/tubal cancer, compared with 0.59% (945/160 594) of those with intact uterus. Multivariable analysis showed no evidence of an association between hysterectomy and invasive epithelial ovarian/tubal cancer (hazard ratio 0.98, 95% CI 0.85-1.13, P = 0.765). CONCLUSIONS This large cohort study provides further independent validation that hysterectomy is not associated with alteration of invasive epithelial ovarian and tubal cancer risk. These data are important both for clinical counselling and for refining risk prediction models. TWEETABLE ABSTRACT Hysterectomy does not alter risk of invasive epithelial ovarian and tubal cancer.
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- 2021
21. UKCTOCS update: applying insights of delayed effects in cancer screening trials to the long-term follow-up mortality analysis
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Robert Woolas, Jatinderpal Kalsi, Usha Menon, Matthew Burnell, Anne Dawnay, Steven J. Skates, Stuart Campbell, Aleksandra Gentry-Maharaj, Andy Ryan, Ian Jacobs, Chloe Karpinskyj, Lesley Fallowfield, Mahesh K.B. Parmar, Naveena Singh, Alistair McGuire, and Sophia Apostolidou
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medicine.medical_specialty ,Long term follow up ,Medicine (miscellaneous) ,Ovarian cancer screening ,Update ,Cancer screening ,03 medical and health sciences ,0302 clinical medicine ,Primary outcome ,Ovarian cancer ,Epidemiology ,medicine ,Humans ,Delayed effect ,Pharmacology (medical) ,030212 general & internal medicine ,Trial registration ,Intensive care medicine ,Early Detection of Cancer ,Proportional Hazards Models ,Ovarian Neoplasms ,Mortality analysis ,lcsh:R5-920 ,business.industry ,RC0254 Neoplasms. Tumors. Oncology (including Cancer) ,Follow-up ,Mortality reduction ,United Kingdom ,Test (assessment) ,030220 oncology & carcinogenesis ,RA Public aspects of medicine ,Female ,UKCTOCS ,business ,lcsh:Medicine (General) ,Follow-Up Studies - Abstract
Background During trials that span decades, new evidence including progress in statistical methodology, may require revision of original assumptions. An example is the continued use of a constant-effect approach to analyse the mortality reduction which is often delayed in cancer-screening trials. The latter led us to re-examine our approach for the upcoming primary mortality analysis (2020) of long-term follow-up of the United Kingdom Collaborative Trial of Ovarian Cancer Screening (LTFU UKCTOCS), having initially (2014) used the proportional hazards (PH) Cox model. Methods We wrote to 12 experts in statistics/epidemiology/screening trials, setting out current evidence, the importance of pre-specification, our previous mortality analysis (2014) and three possible choices for the follow-up analysis (2020) of the mortality outcome: (A) all data (2001–2020) using the Cox model (2014), (B) new data (2015–2020) only and (C) all data (2001–2020) using a test that allows for delayed effects. Results Of 11 respondents, eight supported changing the 2014 approach to allow for a potential delayed effect (option C), suggesting various tests while three favoured retaining the Cox model (option A). Consequently, we opted for the Versatile test introduced in 2016 which maintains good power for early, constant or delayed effects. We retained the Royston-Parmar model to estimate absolute differences in disease-specific mortality at 5, 10, 15 and 18 years. Conclusions The decision to alter the follow-up analysis for the primary outcome on the basis of new evidence and using new statistical methodology for long-term follow-up is novel and has implications beyond UKCTOCS. There is an urgent need for consensus building on how best to design, test, estimate and report mortality outcomes from long-term randomised cancer screening trials. Trial registration ISRCTN22488978. Registered on 6 April 2000.
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- 2021
22. Completeness and accuracy of national cancer and death registration for outcome ascertainment in trials—an ovarian cancer exemplar
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Usha Menon, Aleksandra Gentry-Maharaj, Alistair McGuire, Steven J. Skates, Stuart Campbell, Andy Ryan, Ian Jacobs, Matthew Burnell, Lesley Fallowfield, Chloe Karpinskyj, M. Parmar, Susan K. Massingham, Sophia Apostolidou, Martin Widschwendter, Danielle Margolin-Crump, Naveena Singh, Jatinderpal Kalsi, Robert Woolas, Elizabeth Benjamin, and Mariam Habib
- Subjects
medicine.medical_specialty ,Registry ,Peritoneal cancer ,Medicine (miscellaneous) ,Cancer registration ,Ovarian cancer screening ,Sensitivity and Specificity ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Randomized controlled trial ,law ,Ovarian cancer ,medicine ,Humans ,Mass Screening ,Pharmacology (medical) ,030212 general & internal medicine ,Registries ,Adjudication ,Early Detection of Cancer ,Cause of death ,Aged ,Ovarian Neoplasms ,Randomised controlled trial ,lcsh:R5-920 ,Obstetrics ,business.industry ,RC0254 Neoplasms. Tumors. Oncology (including Cancer) ,Research ,Cancer ,Middle Aged ,medicine.disease ,United Kingdom ,Outcomes review ,030220 oncology & carcinogenesis ,Death registration ,Screening ,RA Public aspects of medicine ,Female ,UKCTOCS ,business ,lcsh:Medicine (General) - Abstract
Background There is a trend to increasing use of routinely collected health data to ascertain outcome measures in trials. We report on the completeness and accuracy of national ovarian cancer and death registration in the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS). Methods Of the 202,638 participants, 202,632 were successfully linked and followed through national cancer and death registries of Northern Ireland, Wales and England. Women with registrations of any of 19 pre-defined ICD-10 codes suggestive of tubo-ovarian cancer or notification of ovarian/tubal/peritoneal cancer from hospital episode statistics or trial sites were identified. Copies of hospital and primary care notes were retrieved and reviewed by an independent outcomes review committee. National registration of site and cause of death as ovarian/tubal/peritoneal cancer (C56/C57/C48) obtained up to 3 months after trial censorship was compared to that assigned by outcomes review (reference standard). Results Outcome review was undertaken in 3110 women on whom notification was received between 2001 and 2014. Ovarian cancer was confirmed in 1324 of whom 1125 had a relevant cancer registration. Sensitivity and specificity of ovarian/tubal/peritoneal cancer registration were 85.0% (1125/1324; 95% CI 83.7–86.2%) and 94.0% (1679/1786; 95% CI 93.2–94.8%), respectively. Of 2041 death registrations reviewed, 681 were confirmed to have a tubo-ovarian cancer of whom 605 had relevant death registration. Sensitivity and specificity were 88.8% (605/681; 95% CI 86.4–91.2%) and 96.7% (1482/1533, 95% CI 95.8–97.6%), respectively. When multiple electronic health record sources were considered, sensitivity for cancer site increased to 91.1% (1206/1324, 95% CI 89.4–92.5%) and for cause of death 94.0% (640/681, 95% CI 91.9–95.5%). Of 1232 with cancer registration, 8.7% (107/1232) were wrongly designated as ovarian/tubal/peritoneal cancers by the registry and 4.0% (47/1172) of confirmed tubo-ovarian cancers were mis-registered. In 656 with death registrations, 7.8% (51/656) were wrongly assigned as due to ovarian/tubal/peritoneal cancers while 6.2% (40/645) of confirmed tubo-ovarian cancer deaths were mis-registered. Conclusion Follow-up of trial participants for tubo-ovarian cancer using national registry data will result in incomplete ascertainment, particularly of the site due in part to the latency of registration. This can be reduced by using other routinely collected data such as hospital episode statistics. Central adjudication by experts though resource intensive adds value by improving the accuracy of diagnoses. Trial registration ISRCTN: ISRCTN22488978. Registered on 6 April 2000
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- 2021
23. Completeness and Accuracy of National Cancer and Death Registration for Outcome Ascertainment in Trials - An Ovarian Cancer Exemplar
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Jatinderpal K Kalsi, Andy Ryan, Aleksandra Gentry-Maharaj, Danielle Crump, Naveena Singh, Matthew Burnell, Elizabeth Benjamin, Sophia Apostolidou, Mariam Habib, Susan Massingham, Karpinskyj Chloe, Robert Woolas, Martin Widschwendter, Lesley Fallowfield, Stuart Campbell, Steve Skates, Alistair J McGuire, Max Parmar, Ian Jacobs, and Usha Menon
- Abstract
Background: There is a trend to increasing use of routinely collected health data to ascertain outcome measures in trials. We report on completeness and accuracy of national ovarian cancer and death registration in the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS).Methods: Of the 202638 participants, 202632 were successfully linked and followed through national cancer and death registries of Northern Ireland, Wales and England. Women with registrations of any of 19 pre-defined ICD-10 codes suggestive of tubo-ovarian cancer or notification of ovarian/tubal/peritoneal cancer from hospital episode statistics or trial sites were identified. Copies of hospital and primary care notes were retrieved and reviewed by an independent outcomes review committee. National registration of site and cause of death as ovarian/tubal/peritoneal cancer (C56/C57/C48) obtained up to three months after trial censorship was compared to that assigned by outcomes review (reference standard).Results: Outcome review was undertaken in 3110 women on whom notification was received between 2001 and 2014. Ovarian cancer was confirmed in 1324 of whom 1125 had a relevant cancer registration. Sensitivity and specificity of ovarian/tubal/peritoneal cancer registration was 85.0%(1125/1324; 95%CI 83.7%-86.2%) and 94.0%(1679/1786; 95%CI93.2%-94.8%), respectively. Of 2041 death registrations reviewed, 681 were confirmed to have a tubo-ovarian cancer of whom 605 had relevant death registration. Sensitivity and specificity was 88.8%(605/681; 95%CI86.4%-91.2%) and 96.7%(1482/1533; 95%CI95.8%-97.6%%) respectively. When multiple electronic health record sources were considered, sensitivity for cancer site increased to 91.1%(1206/1324; 95%CI89.4%-92.5%) and for cause of death 94.0%(640/681; 95%CI91.9%-95.5%).Of 1232 with cancer registration, 8.7%(107/1232) were wrongly designated as ovarian/tubal/peritoneal cancers by the registry and 4.0%(47/1172) of confirmed tubo-ovarian cancers were mis-registered. In 656 with death registrations, 7.8%(51/656) were wrongly assigned as ovarian/tubal/peritoneal cancers whilst 6.2%(40/645) of confirmed tubo-ovarian cancer deaths were mis-registered.Conclusion: Follow-up of trial participants for tubo-ovarian cancer using national registry data will result in incomplete ascertainment particularly of site due in part to the latency of registration. This can be reduced by using other routinely collected data such as hospital episode statistics. Central adjudication by experts though resource intensive adds value by improving accuracy of diagnoses. Trial registration: ISRCTN22488978, date of trial registration: 6/4/2000
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- 2020
24. The Enhanced Liver Fibrosis test is associated with liver-related outcomes in postmenopausal women with risk factors for liver disease
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Julie Parkes, Sophia Apostolidou, William Rosenberg, Usha Menon, Andy Ryan, Sudeep Tanwar, Matthew Burnell, Scott Harris, P M Trembling, and Aleksandra Gentry-Maharaj
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Liver Cirrhosis ,medicine.medical_specialty ,Liver fibrosis ,Chronic liver disease ,law.invention ,Liver disease ,Randomized controlled trial ,law ,Risk Factors ,Internal medicine ,Clinical Decision Rules ,medicine ,Health Status Indicators ,Humans ,Obesity ,lcsh:RC799-869 ,Aged ,Retrospective Studies ,Alcohol-related liver disease ,business.industry ,Proportional hazards model ,Liver Diseases ,Hazard ratio ,Gastroenterology ,General Medicine ,Hepatology ,Middle Aged ,medicine.disease ,Prognosis ,Confidence interval ,Postmenopause ,Case-Control Studies ,Cohort ,lcsh:Diseases of the digestive system. Gastroenterology ,Female ,Self Report ,business ,Research Article ,Non-alcoholic fatty liver disease ,Follow-Up Studies - Abstract
Background Chronic liver disease (CLD) is usually asymptomatic but earlier detection is critical to permit life-saving interventions for those at risk due to high alcohol consumption and increased body mass index (BMI). The aim of this study was to estimate the association between the Enhanced Liver Fibrosis (ELF) test and liver-related events (LRE) and its performance in predicting LRE in postmenopausal women with risk factors in a nested case-control study within the United Kingdom Trial of Ovarian Cancer Screening (UKCTOCS). Methods In a cohort of 95,126 we performed a case-control study measuring ELF in blinded samples from 173 participants with self-reported high alcohol use and / or BMI ≥25 kg/m2 comprising all 58 cases who developed LRE and 115 controls matched for age, alcohol and BMI who did not develop LRE during median follow-up of 8.5 years. Results Using Cox regression at an ELF threshold of 10.51 hazard ratios (HR) for LRE were 4.88 (95% confidence interval (CI) 2.37–10.03) (unadjusted model) and 4.62 (95% CI 2.12–10.08) (adjusted for deprivation and self-reported hypertension, heart disease, hypercholesterolaemia and diabetes). At a threshold of 9.8 HR for LRE were 2.21 (95% CI 1.22–3.97) (unadjusted model) and 2.18 (95% CI 1.19–4.01) (adjusted). ELF was evaluated as a time dependent variable by generating time-dependent Cox models; HRs at an ELF threshold of 10.51 were 1.94 (95% CI 1.10–3.39) (unadjusted) and 2.05 (95% CI 1.16–3.64) (adjusted) and at a threshold of 9.8 HRs were 1.85 (95% CI 1.09–3.15) (unadjusted) and 1.80 (95% CI 1.04–3.13) (adjusted). Area under the receiver operating characteristic curve for recruitment ELF predicting LRE was 0.58 (95% CI 0.49–0.68), and for second subsequent ELF 0.61 (95% CI 0.52–0.71). Conclusion This study demonstrates the association between ELF and CLD in postmenopausal women with risk factors for liver disease, creating the opportunity to intervene to reduce liver-related mortality and morbidity. Although larger studies are required, these results demonstrate the potential of ELF as a prognostic tool in health checks in primary care. Trial registration This study is nested in UKCTOCS. UKCTOCS is registered as an International Standard Randomised Controlled Trial, number ISRCTN22488978. Registered 06/04/2000.
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- 2020
25. Tracing the Evolution of Clonal Hematopoiesis to AML Using Longitudinal Pre-Diagnosis Blood Samples
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Usha Menon, Caroline Watson, Jamie R. Blundell, and Sophia Apostolidou
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Pathology ,medicine.medical_specialty ,Immunology ,Clonal hematopoiesis ,medicine ,Cell Biology ,Hematology ,Tracing ,Biology ,Biochemistry - Abstract
The acquisition of somatic mutations in hematopoietic stem and progenitor cells (HSPCs) is increasingly common with age (`clonal hematopoiesis'). If sequential acquisition and clonal expansion of mutations occurs, progression to Acute Myeloid Leukemia (AML) can occur. While the mutational landscape of clonal hematopoiesis antecedent to AML development has been well-defined (Abelson et al. 2018, Desai et al. 2018), the timing of acquisition and growth dynamics of these high-risk mutations remain largely unknown. At what age are these mutations acquired? Are the fitness effects (growth rates) conferred by specific mutations predictable from person-to-person and how do fitness effects change with additive mutations? Are the clonal dynamics that precede AML development characterised by strong competition between clones (clonal interference)? To answer these questions, we identified 220 women from the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) who were cancer-free at enrolment but subsequently developed AML during the >12 years follow-up. 50 of these women had annual blood samples collected at multiple time-points pre-AML diagnosis (mean: 5 time-points, range: 2-11). Deep error-corrected duplex sequencing, with a variant allele frequency (VAF) detection limit of 0.1%, was performed on peripheral blood DNA from these women, as well as from age- and timepoint-matched controls who remained blood cancer free. A custom designed next-generation sequencing (NGS) panel was used to enable detection of mutations in 34 clonal hematopoiesis/AML-associated genes, genome-wide mosaic chromosomal alterations (mCAs) and AML-associated translocations. Having samples from multiple timepoints enabled the fitness effects (growth rates) of mutations to be calculated, as well as the additive effect of further mutations. These growth rates, in combination with insights from evolutionary theory, allowed the acquisition time of many mutations to be estimated, with initiating driver mutations often arising in the first 2 decades of life in the pre-AML cases. Growth trajectory dynamics of co-occurring mutations enabled the clonal composition to be inferred in many instances and revealed linear evolution of successive mutations in some pre-AML cases, but a branching pattern with clear evidence of clonal interference in others. Specific variants, which we have previously identified as 'highly fit' in clonal hematopoiesis (Watson et al. 2020), were significantly enriched in pre-AML cases compared to controls and were often detectable at VAFs >10% more than 5 years pre-diagnosis. NPM1 mutations, which characteristically occur `late' in AML development, could be detected as early as 2 years pre-diagnosis, highlighting the benefit afforded by error-corrected low VAF variant calling, particularly in high-risk individuals. Our findings, exploiting longitudinal blood samples collected pre-AML combined with an integrated assessment of multiple types of genetic changes, reveal key insights into the evolutionary dynamics of mutations in the years preceding AML development. Understanding which features distinguish pre-malignant from benign clonal evolution is key for risk stratification of individuals with clonal hematopoiesis to allow rational monitoring and identification of individuals that may benefit from early intervention studies. Figure 1 Figure 1. Disclosures Watson: Johnson & Johnson: Consultancy; Inivata: Consultancy. Menon: Abcodia Ltd: Current holder of individual stocks in a privately-held company. Blundell: Johnson & Johnson: Consultancy; Inivata: Consultancy.
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- 2021
26. Identification of a Biomarker Panel for Early Detection of Lung Cancer Patients
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J.C. Barnes, Maria Pernemalm, R. Shah, David C. H. Lee, Bethany Geary, Piotr Krysiak, Sophia Apostolidou, Richard Booton, Anthony D. Whetton, S. Maleki-Dizaji, Caroline Dive, Narges Azadbakht, Philip A.J. Crosbie, Joseph T. Snow, and Michael J. Walker
- Subjects
0301 basic medicine ,Oncology ,Male ,Proteomics ,medicine.medical_specialty ,Lung Neoplasms ,Proteome ,Early detection ,Biochemistry ,Machine Learning ,03 medical and health sciences ,Tandem Mass Spectrometry ,Internal medicine ,medicine ,Biomarkers, Tumor ,Humans ,Lung cancer ,Vein ,Early Detection of Cancer ,Aged ,Neoplasm Staging ,Lung ,Manchester Cancer Research Centre ,030102 biochemistry & molecular biology ,business.industry ,ResearchInstitutes_Networks_Beacons/mcrc ,General Chemistry ,Middle Aged ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,Cohort ,Biomarker (medicine) ,Female ,business - Abstract
Lung cancer is the most common cause of cancer-related mortality worldwide, characterized by late clinical presentation (49-53% of patients are diagnosed at stage IV) and consequently poor outcomes. One challenge in identifying biomarkers of early disease is the collection of samples from patients prior to symptomatic presentation. We used blood collected during surgical resection of lung tumors in an iTRAQ isobaric tagging experiment to identify proteins effluxing from tumors into pulmonary veins. Forty proteins were identified as having an increased abundance in the vein draining from the tumor compared to "healthy" pulmonary veins. These protein markers were then assessed in a second cohort that utilized the mass spectrometry (MS) technique: Sequential window acquisition of all theoretical fragment ion spectra (SWATH) MS. SWATH-MS was used to measure proteins in serum samples taken from 25 patients
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- 2019
27. The 14q32 maternally imprinted locus is a major source of longitudinally stable circulating microRNAs as measured by small RNA sequencing
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Wendy K. Alderton, J.C. Barnes, Usha Menon, Hector C. Keun, Ian Jacobs, Lauren Harper, Sophia Apostolidou, Gabriel N. Valbuena, Rhiannon Roberts, Valbuena, Gabriel N [0000-0001-6825-7214], Menon, Usha [0000-0003-3708-1732], Keun, Hector C [0000-0001-7358-8851], Apollo - University of Cambridge Repository, and Cancer Research UK
- Subjects
Oncology ,medicine.medical_specialty ,Small RNA ,Intraclass correlation ,0299 Other Physical Sciences ,lcsh:Medicine ,Locus (genetics) ,Biology ,0601 Biochemistry and Cell Biology ,Article ,Body Mass Index ,03 medical and health sciences ,Genomic Imprinting ,0302 clinical medicine ,Internal medicine ,microRNA ,medicine ,Biomarkers, Tumor ,Humans ,RNA, Neoplasm ,lcsh:Science ,030304 developmental biology ,Aged ,Chromosomes, Human, Pair 14 ,Ovarian Neoplasms ,0303 health sciences ,Multidisciplinary ,Sequence Analysis, RNA ,Confounding ,lcsh:R ,Age Factors ,RNA ,Middle Aged ,3. Good health ,Circulating MicroRNA ,MicroRNAs ,030220 oncology & carcinogenesis ,Multigene Family ,miRNAs ,lcsh:Q ,Female ,Genomic imprinting ,Biomarkers ,Follow-Up Studies - Abstract
Understanding the normal temporal variation of serum molecules is a critical factor for identifying useful candidate biomarkers for the diagnosis and prognosis of chronic disease. Using small RNA sequencing in a longitudinal study of 66 women with no history of cancer, we determined the distribution and dynamics (via intraclass correlation coefficients, ICCs) of the miRNA profile over 3 time points sampled across 2–5 years in the course of the screening trial, UKCTOCS. We were able to define a subset of longitudinally stable miRNAs (ICC >0.75) that were individually discriminating of women who had no cancer over the study period. These miRNAs were dominated by those originating from the C14MC cluster that is subject to maternal imprinting. This assessment was not significantly affected by common confounders such as age, BMI or time to centrifugation nor alternative methods to data normalisation. Our analysis provides important benchmark data supporting the development of miRNA biomarkers for the impact of life-course exposure as well as diagnosis and prognostication of chronic disease.
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- 2019
28. Enhanced Liver Fibrosis Test Predicts Liver-Related Outcomes in Postmenopausal Women with Risk Factors - A Case Control Study Nested within the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
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Sudeep Tanwar, Usha Menon, Matthew Burnell, William Rosenberg, Julie Parkes, P M Trembling, Sophia Apostolidou, Scott Harris, Aleksandra Gentry-Maharaj, and Andy Ryan
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medicine.medical_specialty ,business.industry ,Proportional hazards model ,Hazard ratio ,Psychological intervention ,Case-control study ,Chronic liver disease ,medicine.disease ,Internal medicine ,Diabetes mellitus ,Nested case-control study ,Medicine ,business ,Body mass index - Abstract
Background: Chronic liver disease (CLD) is usually asymptomatic but earlier detection is critical to permit life-saving interventions for those at risk due to high alcohol consumption and increased body mass index (BMI). We evaluated performance of the Enhanced Liver Fibrosis (ELF) test in predicting CLD in postmenopausal women with risk factors in a nested case control study within the United Kingdom Trial of Ovarian Cancer Screening (UKCTOCS). Methods: ELF was measured in blinded samples from 58 participants with selfreported high alcohol use and/or BMI ≥25kg/m2 who developed liver-related events (LRE) (cases), and in 115 controls matched for age, alcohol and BMI who did not develop LRE during median follow-up of 8*5 years. Findings: Using Cox regression at an ELF threshold of 9*8 hazard ratio (HR) for LRE was 2*21 (unadjusted model) and 2*18 (adjusted for deprivation and selfreported hypertension, heart disease, hypercholesterolaemia or diabetes). At a threshold of 10*51, HR was 4*88 (unadjusted) and 4*62 (adjusted). ELF was evaluated as a time dependent variable by generating timedependent Cox models; HRs at an ELF threshold of 9*8 were 1*85 (unadjusted) and 1*80 (adjusted), and at a threshold of 10*51 HRs were 1*94 (unadjusted) and 2*05 (adjusted). Interpretation: This study demonstrates that the ELF test predicts complications of CLD in postmenopausal women with risk factors, creating the opportunity to intervene to reduce liver-related mortality and morbidity. Although larger studies are required, these results demonstrate the possible role for ELF as a prognostic tool in health checks in primary care. Funding Statement: No external funding for this nested study. The trial, UKCTOCS, was funded by Medical Research Council (G9901012 and G0801228), Cancer Research UK (C1479/A2884), and the UK Department of Health, with additional support from The Eve Appeal. UM and WMR are supported by the NIHR University College London Hospitals (UCLH) Biomedical Research Centre. SA was funded by Abcodia Pvt Ltd. Declaration of Interests: UM has stocks awarded to her by UCL in Abcodia Pvt. Ltd. WMR is an inventor of the ELF test and has received fees from Siemens Healthineers for lecturing, travel, and consulting and research support. All the other authors declare no conflict of interest. Ethics Approval Statement: The current study was approved by the National Research Ethics Service (NRES) Committee London - Bentham (Ref: 05/Q0505/57) on 10th August 2011.
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- 2019
29. Development and Validation of Apolipoprotein AI-Associated Lipoprotein Proteome Panel for the Prediction of Cholesterol Efflux Capacity and Coronary Artery Disease
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Timothy S. Collier, Sophia Apostolidou, Bruce M. McManus, Robert Balshaw, Darlene L.Y. Dai, Cory E. Bystrom, Marc S. Penn, Zhicheng Jin, Virginia Chen, Raymond T. Ng, and Zsuzsanna Hollander
- Subjects
0301 basic medicine ,Oncology ,Male ,medicine.medical_specialty ,Multivariate statistics ,Proteome ,Lipoproteins ,Clinical Biochemistry ,Myocardial Infarction ,Coronary Artery Disease ,030204 cardiovascular system & hematology ,Validation Studies as Topic ,Logistic regression ,Coronary artery disease ,Correlation ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Limit of Detection ,Tandem Mass Spectrometry ,Internal medicine ,medicine ,Humans ,Chromatography, High Pressure Liquid ,Apolipoprotein A-I ,business.industry ,Cholesterol ,Biochemistry (medical) ,Middle Aged ,medicine.disease ,030104 developmental biology ,chemistry ,ROC Curve ,Area Under Curve ,Case-Control Studies ,Female ,Efflux ,business ,Lipoprotein - Abstract
BACKGROUND Cholesterol efflux capacity (CEC) is a measure of HDL function that, in cell-based studies, has demonstrated an inverse association with cardiovascular disease. The cell-based measure of CEC is complex and low-throughput. We hypothesized that assessment of the lipoprotein proteome would allow for precise, high-throughput CEC prediction. METHODS After isolating lipoprotein particles from serum, we used LC-MS/MS to quantify 21 lipoprotein-associated proteins. A bioinformatic pipeline was used to identify proteins with univariate correlation to cell-based CEC measurements and generate a multivariate algorithm for CEC prediction (pCE). Using logistic regression, protein coefficients in the pCE model were reweighted to yield a new algorithm predicting coronary artery disease (pCAD). RESULTS Discovery using targeted LC-MS/MS analysis of 105 training and test samples yielded a pCE model comprising 5 proteins (Spearman r = 0.86). Evaluation of pCE in a case–control study of 231 specimens from healthy individuals and patients with coronary artery disease revealed lower pCE in cases (P = 0.03). Derived within this same study, the pCAD model significantly improved classification (P < 0.0001). Following analytical validation of the multiplexed proteomic method, we conducted a case–control study of myocardial infarction in 137 postmenopausal women that confirmed significant separation of specimen cohorts in both the pCE (P = 0.015) and pCAD (P = 0.001) models. CONCLUSIONS Development of a proteomic pCE provides a reproducible high-throughput alternative to traditional cell-based CEC assays. The pCAD model improves stratification of case and control cohorts and, with further studies to establish clinical validity, presents a new opportunity for the assessment of cardiovascular health.
- Published
- 2018
30. Colorectal cancer ascertainment through cancer registries, hospital episode statistics, and self-reporting compared to confirmation by clinician: A cohort study nested within the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
- Author
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Darren S, Thomas, Aleksandra, Gentry-Maharaj, Andy, Ryan, Evangelia-Ourania, Fourkala, Sophia, Apostolidou, Matthew, Burnell, Wendy, Alderton, Julie, Barnes, John F, Timms, and Usha, Menon
- Subjects
Aged, 80 and over ,Ovarian Neoplasms ,Hospital episode statistics ,Death certificates ,Middle Aged ,Prognosis ,United Kingdom ,Article ,Colorectal neoplasms ,Hospitalization ,ROC Curve ,Humans ,Electronic health records ,Female ,Registries ,Self Report ,Early Detection of Cancer ,Aged ,Retrospective Studies - Abstract
Highlights • Ninety-two & 99% of colorectal cancers were registered after one & six years. • Hospital Episode Statistics tend to capture events unregistered after one year. • Self-reporting by women aged ≥50 was less reliable and had low respondents. • Electronic health records in the UK are suitable for studying colorectal cancer in women., Background Electronic health records are frequently used for cancer epidemiology. We report on their quality for ascertaining colorectal cancer (CRC) in UK women. Methods Population-based, retrospective cohort study nested within the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS). Postmenopausal women aged 50–74 who were diagnosed with CRC during 2001–11 following randomisation to the UKCTOCS were identified and their diagnosis confirmed with their treating clinician. The sensitivity and positive predictive value (PPV) of cancer and death registries, hospital episode statistics, and self-reporting were calculated by pairwise comparisons to the treating clinician’s confirmation, while specificity and negative predictive value were estimated relative to expected cases. Results Notification of CRC events were received for 1,085 women as of 24 May 2011. Responses were received from 61% (660/1,085) of clinicians contacted. Nineteen women were excluded (18 no diagnosis date, one diagnosed after cut-off). Of the 641 eligible, 514 had CRC, 24 had a benign polyp, and 103 had neither diagnosis. The sensitivity of cancer registrations at one- and six-years post-diagnosis was 92 (95% CI 90–94) and 99% (97–100), respectively, with a PPV of 95% (95% CI 92/93–97). The sensitivity & PPV of cancer registrations (at one-year post-diagnosis) & hospital episode statistics combined were 98 (96–99) and 92% (89–94), respectively. Conclusions Cancer and death registrations in the UK are a reliable resource for CRC ascertainment in women. Hospital episode statistics can supplement delays in cancer registration. Self-reporting seems less reliable.
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- 2018
31. Identification and Verification of a Biomarker Panel for Early Diagnosis of Lung Cancer Patients
- Author
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Philip A.J. Crosbie, Richard Booton, Maria Pernemalm, S. Maleki-Dizaji, R. Shah, Joseph T. Snow, Anthony D. Whetton, Michael J. Walker, Narges Azadbakht, Caroline Dive, Bethany Geary, J.C. Barnes, Piotr Krysiak, David C. H. Lee, and Sophia Apostolidou
- Subjects
Research ethics ,COPD ,medicine.medical_specialty ,business.industry ,Early detection ,Biomarker panel ,medicine.disease ,Research centre ,Internal medicine ,Cohort ,medicine ,Biomarker (medicine) ,Lung cancer ,business - Abstract
Background: Lung cancer is the most common cause of cancer related mortality worldwide, characterised by late clinical presentation (49-53% of patients are diagnosed at stage IV) and consequently poor outcomes. One challenge in identifying biomarkers of early disease is the collection of samples from patients prior to symptomatic presentation. An additional complication in determining differential biomarkers arises from protein expression change from non-specific systemic responses and co-morbidities such as Chronic Obstructive Pulmonary Disease (COPD). Methods: We employed isobaric tagging, relative quantification mass spectrometry to analyse protein markers that differed in blood entering and egressing from the tumour bearing lobe of the diseased lung immediately prior to lung resection surgery. These potential biomarkers were assessed as lung cancer early detection biomarkers using the orthogonal mass spectrometry (MS) technique Sequential window acquisition of all theoretical fragment ion spectra (SWATH) MS which we showed had equivalent quantification value to a selected reaction monitoring (SRM) approach. Findings: In a second cohort, SWATH-MS was used to measure 974 proteins in serum samples taken
- Published
- 2018
32. Serum CA19-9 Is Significantly Upregulated up to 2 Years before Diagnosis with Pancreatic Cancer: Implications for Early Disease Detection
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Ross C. Smith, Stephane Camuzeaux, Eithne Costello, Aleksandra Gentry-Maharaj, Usha Menon, Richard Gunu, Anne Dawnay, Evangelia-Ourania Fourkala, Ian Jacobs, John F. Timms, Sophia Apostolidou, Neomal S. Sandanayake, Claire Jenkinson, Alexey Zaikin, Oleg Blyuss, Stephen P. Pereira, and Darragh P. O'Brien
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,Pathology ,CA-19-9 Antigen ,endocrine system diseases ,Pancreatitis-Associated Proteins ,Sensitivity and Specificity ,Article ,Carcinoembryonic antigen ,Antigen ,Antigens, CD ,Antigens, Neoplasm ,Risk Factors ,Internal medicine ,Pancreatic cancer ,Biomarkers, Tumor ,medicine ,Humans ,Neoplasm ,Lectins, C-Type ,Early Detection of Cancer ,Aged ,biology ,business.industry ,Case-control study ,Reproducibility of Results ,Cancer ,Middle Aged ,Prognosis ,medicine.disease ,Carcinoembryonic Antigen ,Up-Regulation ,Pancreatic Neoplasms ,CA-125 Antigen ,Case-Control Studies ,biology.protein ,CA19-9 ,business ,Cell Adhesion Molecules - Abstract
Purpose: Biomarkers for the early detection of pancreatic cancer are urgently needed. The primary objective of this study was to evaluate whether increased levels of serum CA19-9, CA125, CEACAM1, and REG3A are present before clinical presentation of pancreatic cancer and to assess the performance of combined markers for early detection and prognosis. Experimental Design: This nested case–control study within the UKCTOCS included 118 single and 143 serial serum samples from 154 postmenopausal women who were subsequently diagnosed with pancreatic cancer and 304 matched noncancer controls. Samples were split randomly into independent training and test sets. CA19-9, CA125, CEACAM1, and REG3A were measured using ELISA and/or CLIA. Performance of markers to detect cancers at different times before diagnosis and for prognosis was evaluated. Results: At 95% specificity, CA19-9 (>37 U/mL) had a sensitivity of 68% up to 1 year, and 53% up to 2 years before diagnosis. Combining CA19-9 and CA125 improved sensitivity as CA125 was elevated (>30 U/mL) in approximately 20% of CA19-9–negative cases. CEACAM1 and REG3A were late markers adding little in combined models. Average lead times of 20 to 23 months were estimated for test-positive cases. Prediagnostic levels of CA19-9 and CA125 were associated with poor overall survival (HR, 2.69 and 3.15, respectively). Conclusions: CA19-9 and CA125 have encouraging sensitivity for detecting preclinical pancreatic cancer, and both markers can be used as prognostic tools. This work challenges the prevailing view that CA19-9 is upregulated late in the course of pancreatic cancer development. Clin Cancer Res; 21(3); 622–31. ©2014 AACR.
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- 2015
33. Pregnancy-associated plasma protein A regulates mitosis and is epigenetically silenced in breast cancer
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Marco Loddo, Gareth H. Williams, Martin Widschwendter, Joanna Andryszkiewicz, Slavica Tudzarova, A Wollenschlaeger, Sophia Apostolidou, Dimitra Dafou, Richard Sainsbury, Sara Rodriguez-Acebes, Kai Stoeber, and Allison Jones
- Subjects
Breast cancer ,RNA interference ,Cancer research ,medicine ,FOXM1 ,Cancer ,Gene silencing ,Cell cycle ,Biology ,Prometaphase ,medicine.disease ,Mitosis ,Pathology and Forensic Medicine - Abstract
Aberrant mitosis is a common feature of cancer, yet little is known about the altered genes causing mitotic defects. We screened human tumours for cells with morphological signatures of highly specific mitotic defects previously assigned to candidate genes in a genome-wide RNA interference screen carried out in HeLa cells (www.mitocheck.org). We discovered a striking enrichment of early mitotic configurations indicative of prophase/prometaphase delay in breast cancer. Promoter methylation analysis of MitoCheck candidate genes assigned to the corresponding 'mitotic delay' class linked this defect to epigenetic silencing of the gene encoding pregnancy-associated plasma protein-A (PAPPA), a secreted protease. PAPPA silencing was highly prevalent in precursor lesions and invasive breast cancer. Experimental manipulation of PAPPA protein levels in human mammary epithelial cells and in breast cancer cell lines demonstrates that progression through early mitosis is dependent on PAPPA function, and that breast cancer cells become more invasive after down-regulation of this protease. PAPPA regulates mitotic progression through modulating the IGF-1 signalling pathway resulting in activation of the forkhead transcription factor FoxM1, which drives a transcriptional cluster of essential mitotic genes. Our results show that PAPPA has a critical function in normal cell division and is targeted early in breast cancer development.
- Published
- 2014
34. Erfolgreiche Kardioversion bei neonatalem Vorhofflattern
- Author
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Florian Arndt, Kurt Hecher, Dominique Singer, Fridrike Stute, Sophia Apostolidou, Rainer Kozlik-Feldmann, and Manuela Tavares-de-Sousa
- Subjects
03 medical and health sciences ,0302 clinical medicine ,business.industry ,Maternity and Midwifery ,Pediatrics, Perinatology and Child Health ,Obstetrics and Gynecology ,Medicine ,030212 general & internal medicine ,030204 cardiovascular system & hematology ,business - Published
- 2018
35. Evaluation in pre-diagnosis samples discounts ICAM-1 and TIMP-1 as biomarkers for earlier diagnosis of pancreatic cancer
- Author
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Usha Menon, Claire Jenkinson, O.E. Fourkala, Stephen P. Pereira, Robert Sutton, John P. Neoptolemos, Sophia Apostolidou, John F. Timms, Trevor Cox, William Greenhalf, Eithne Costello, A Gentry-Maharaj, Ian Jacobs, and Victoria Elliott
- Subjects
Adult ,Male ,medicine.medical_specialty ,Pancreatic ductal adenocarcinoma ,Biophysics ,Enzyme-Linked Immunosorbent Assay ,Biochemistry ,Gastroenterology ,Internal medicine ,Pancreatic cancer ,Biomarkers, Tumor ,medicine ,Carcinoma ,Humans ,ICAM-1 ,Tissue Inhibitor of Metalloproteinase-1 ,business.industry ,Case-control study ,Middle Aged ,Jaundice ,Intercellular Adhesion Molecule-1 ,medicine.disease ,Pancreatic Neoplasms ,Case-Control Studies ,Immunology ,Pancreatitis ,Female ,Obstructive jaundice ,medicine.symptom ,business ,Carcinoma, Pancreatic Ductal - Abstract
Circulating intercellular adhesion molecule-1 (ICAM-1) and tissue inhibitor of metalloproteinases-1 (TIMP-1) have been widely proposed as potential diagnostic biomarkers for pancreatic ductal adenocarcinoma (PDAC). We report on serum protein levels prior to clinical presentation of pancreatic cancer. Serum ICAM-1 and TIMP-1 were measured by ELISA in two case–control sets: 1) samples from patients diagnosed with pancreatic cancer (n = 40), chronic pancreatitis (n = 20), benign jaundice due to gall stones (n = 20) and healthy subjects (n = 20); 2) a preclinical set from the UK Collaborative Trial of Ovarian Cancer Screening biobank of samples collected from 27 post-menopausal women 0–12 months prior to diagnosis of pancreatic cancer and controls matched for date of donation and centre. Levels of ICAM-1 and TIMP-1 were significantly elevated in set 1 in PDAC patients with jaundice compared to PDAC patients without jaundice and both proteins were elevated in patients with jaundice due to gall stones. Neither protein was elevated in samples taken 0–12 months prior to PDAC diagnosis compared to non-cancer control samples. In conclusion, evaluation in pre-diagnosis samples discounts ICAM-1 and TIMP-1 as biomarkers for earlier diagnosis of pancreatic cancer. Failure to account for obstructive jaundice may have contributed to the previous promise of these candidate biomarkers.Pancreatic cancer is usually diagnosed when at an advanced stage which greatly limits therapeutic options. Biomarkers that could facilitate earlier diagnosis are urgently sought.
- Published
- 2015
36. Concordance of National Cancer Registration with self-reported breast, bowel and lung cancer in England and Wales: a prospective cohort study within the UK Collaborative Trial of Ovarian Cancer Screening
- Author
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Andy Ryan, Sophia Apostolidou, A. Sharma, Usha Menon, Evangelia-Ourania Fourkala, Aleksandra Gentry-Maharaj, Ian Jacobs, Mariam Habib, Matthew Burnell, and M. Parmar
- Subjects
concordance ,Cancer Research ,medicine.medical_specialty ,Lung Neoplasms ,Short Communication ,Concordance ,Breast Neoplasms ,Cancer registration ,Ovarian cancer screening ,Cohort Studies ,Internal medicine ,parasitic diseases ,Intestinal Neoplasms ,Epidemiology of cancer ,Humans ,Medicine ,cancer registration ,Prospective Studies ,Registries ,UK ,Self report ,Lung cancer ,Prospective cohort study ,Early Detection of Cancer ,Aged ,Gynecology ,Wales ,business.industry ,Middle Aged ,medicine.disease ,England ,Oncology ,Female ,self-reporting ,Self Report ,business ,Cohort study - Abstract
Background: It has been suggested that lower UK cancer survival may be due to incomplete case ascertainment by cancer registries. Methods: We assessed concordance between self-reported breast, bowel and lung cancer and cancer registration (CR) for 1995–2007 in England and Wales in the UK Collaborative Trial of Ovarian Cancer Screening. Results: Concordance of breast cancer CR was higher (94.7%:95% CI: 94.1–95.3%) than for bowel (85.1%:95% CI: 82.1–87.8%) and lung (85.4%:95% CI: 76.3–92.0%). CR concordance was lower in breast cancer (94.5% vs 98.8%) survivors compared with deceased but the difference was small. No difference was found for bowel (85.3% vs 94.6%) or lung (87.1% vs 90.5%) cancer. Conclusion: Concordance of CR and self-reported cancer is high. Incomplete registration is unlikely to be a major cause of lower UK survival rates.
- Published
- 2013
37. Risk of chronic liver disease in post-menopausal women due to body mass index, alcohol and their interaction: a prospective nested cohort study within the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
- Author
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Paul M Trembling, Sophia Apostolidou, Aleksandra Gentry-Maharaj, Julie Parkes, Andy Ryan, Sudeep Tanwar, Matthew Burnell, Ian Jacobs, Usha Menon, and William M. Rosenberg
- Subjects
Ovarian Neoplasms ,Alcohol Drinking ,Ethanol ,lcsh:Public aspects of medicine ,Liver Diseases ,Chronic liver disease ,lcsh:RA1-1270 ,Middle Aged ,Overweight ,United Kingdom ,Body Mass Index ,Postmenopause ,Cirrhosis ,Risk Factors ,Chronic Disease ,Humans ,Female ,Obesity ,Prospective Studies ,Alcohol ,Aged ,Proportional Hazards Models ,Research Article - Abstract
Background We investigated the risk of chronic liver disease (CLD) due to alcohol consumption and body mass index (BMI) and the effects of their interaction in a prospective cohort study of women recruited to the UKCTOCS trial. Methods 95,126 post-menopausal women without documented CLD were stratified into 12 groups defined by combinations of BMI (normal, overweight, obese) and alcohol consumption (none
- Published
- 2016
38. Ovarian cancer screening and mortality in the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS): a randomised controlled trial
- Author
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William R. Liston, Richard Gunu, Julie Taylor, Robert Woolas, Keith M. Godfrey, Danielle N. Crump, Tim Mould, Steven J. Skates, Mahesh K. B. Parmar, Dustin J. Rabideau, Mourad W. Seif, Elizabeth Benjamin, Jeremy Ford, Sophia Apostolidou, John Murdoch, Stephen Dobbs, Mariam Habib, Anne Dawnay, Andrew M. Ryan, Naveena Singh, Matthew Burnell, A. Sharma, Chloe Karpinskyj, Howard Jenkins, Sara Lewis, Simon Leeson, Stuart Campbell, Aleksandra Gentry-Maharaj, Alberto Lopes, K. Reynolds, David E. Oram, Rachel Hallett, Nazar Najib Amso, Ian A Scott, Alistair McGuire, Karin Williamson, Jatinderpal Kalsi, Lesley Fallowfield, Fiona Warburton, Usha Menon, Martin Widschwendter, Jonathan Herod, Ian Jacobs, Derek Cruickshank, Susan K Davies, and Gwendolen Fletcher
- Subjects
Oncology ,medicine.medical_specialty ,R853.C55 ,RZ Other systems of medicine ,Ovarian cancer screening ,law.invention ,RC0254 ,03 medical and health sciences ,Outcome Assessment (Health Care) ,0302 clinical medicine ,Randomized controlled trial ,law ,Internal medicine ,General & Internal Medicine ,RA0421 Public health. Hygiene. Preventive Medicine ,medicine ,Humans ,030212 general & internal medicine ,Early Detection of Cancer ,Aged ,Proportional Hazards Models ,Medicine(all) ,Ovarian Neoplasms ,030219 obstetrics & reproductive medicine ,business.industry ,Great Britain ,Obstetrics and Gynecology ,Membrane Proteins ,General Medicine ,11 Medical And Health Sciences ,Middle Aged ,CA-125 Antigen ,Female ,business ,Algorithms ,RC - Abstract
BACKGROUND: Ovarian cancer has a poor prognosis, with just 40% of patients surviving 5 years. We designed this trial to establish the effect of early detection by screening on ovarian cancer mortality. METHODS: In this randomised controlled trial, we recruited postmenopausal women aged 50-74 years from 13 centres in National Health Service Trusts in England, Wales, and Northern Ireland. Exclusion criteria were previous bilateral oophorectomy or ovarian malignancy, increased risk of familial ovarian cancer, and active non-ovarian malignancy. The trial management system confirmed eligibility and randomly allocated participants in blocks of 32 using computer-generated random numbers to annual multimodal screening (MMS) with serum CA125 interpreted with use of the risk of ovarian cancer algorithm, annual transvaginal ultrasound screening (USS), or no screening, in a 1:1:2 ratio. The primary outcome was death due to ovarian cancer by Dec 31, 2014, comparing MMS and USS separately with no screening, ascertained by an outcomes committee masked to randomisation group. All analyses were by modified intention to screen, excluding the small number of women we discovered after randomisation to have a bilateral oophorectomy, have ovarian cancer, or had exited the registry before recruitment. Investigators and participants were aware of screening type. This trial is registered with ClinicalTrials.gov, number NCT00058032. FINDINGS: Between June 1, 2001, and Oct 21, 2005, we randomly allocated 202,638 women: 50,640 (25·0%) to MMS, 50,639 (25·0%) to USS, and 101,359 (50·0%) to no screening. 202,546 (>99·9%) women were eligible for analysis: 50,624 (>99·9%) women in the MMS group, 50,623 (>99·9%) in the USS group, and 101,299 (>99·9%) in the no screening group. Screening ended on Dec 31, 2011, and included 345,570 MMS and 327,775 USS annual screening episodes. At a median follow-up of 11·1 years (IQR 10·0-12·0), we diagnosed ovarian cancer in 1282 (0·6%) women: 338 (0·7%) in the MMS group, 314 (0·6%) in the USS group, and 630 (0·6%) in the no screening group. Of these women, 148 (0·29%) women in the MMS group, 154 (0·30%) in the USS group, and 347 (0·34%) in the no screening group had died of ovarian cancer. The primary analysis using a Cox proportional hazards model gave a mortality reduction over years 0-14 of 15% (95% CI -3 to 30; p=0·10) with MMS and 11% (-7 to 27; p=0·21) with USS. The Royston-Parmar flexible parametric model showed that in the MMS group, this mortality effect was made up of 8% (-20 to 31) in years 0-7 and 23% (1-46) in years 7-14, and in the USS group, of 2% (-27 to 26) in years 0-7 and 21% (-2 to 42) in years 7-14. A prespecified analysis of death from ovarian cancer of MMS versus no screening with exclusion of prevalent cases showed significantly different death rates (p=0·021), with an overall average mortality reduction of 20% (-2 to 40) and a reduction of 8% (-27 to 43) in years 0-7 and 28% (-3 to 49) in years 7-14 in favour of MMS. INTERPRETATION: Although the mortality reduction was not significant in the primary analysis, we noted a significant mortality reduction with MMS when prevalent cases were excluded. We noted encouraging evidence of a mortality reduction in years 7-14, but further follow-up is needed before firm conclusions can be reached on the efficacy and cost-effectiveness of ovarian cancer screening. FUNDING: Medical Research Council, Cancer Research UK, Department of Health, The Eve Appeal.
- Published
- 2016
39. Enhanced liver fibrosis test predicts liver-related outcomes in postmenopausal women with risk factors in the community
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Usha Menon, Matthew Burnell, S Tanwar, J Parkes, Sophia Apostolidou, William Rosenberg, A Gentry-Maharaj, Andy Ryan, P M Trembling, and Scott Harris
- Subjects
medicine.medical_specialty ,Postmenopausal women ,Hepatology ,business.industry ,Internal medicine ,Liver fibrosis ,medicine ,business ,Gastroenterology ,Test (assessment) - Published
- 2018
40. DNA methylation analysis in liquid-based cytology for cervical cancer screening
- Author
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Donna Baff, Gabrijela Kocjan, Richard Hadwin, Tim Mould, Nitisha Pyndiah, Martin Widschwendter, Allison Jones, Sophia Apostolidou, Ian Jacobs, Matthew Burnell, and Simon Beddows
- Subjects
Adult ,Cancer Research ,Pathology ,medicine.medical_specialty ,Cytological Techniques ,Uterine Cervical Neoplasms ,Cervix Uteri ,Polymerase Chain Reaction ,Sensitivity and Specificity ,Cytology ,Biomarkers, Tumor ,Carcinoma ,medicine ,Humans ,Mass Screening ,Papillomaviridae ,Cervix ,Neoplasm Staging ,Homeodomain Proteins ,Vaginal Smears ,Cervical cancer ,Receiver operating characteristic ,business.industry ,Papillomavirus Infections ,Cancer ,DNA Methylation ,Middle Aged ,Prognosis ,Uterine Cervical Dysplasia ,medicine.disease ,medicine.anatomical_structure ,Oncology ,Case-Control Studies ,Liquid-based cytology ,DNA methylation ,Carcinoma, Squamous Cell ,Female ,business - Abstract
Cervical cancer is the second most common type of cancer in women worldwide. Preinvasive disease can be detected by cervical cytology. All currently available cytology technologies rely on the visual analysis of exfoliated cells from the uterine cervix. Improvement of conventional cytological screening has been proposed by the introduction of molecular-based markers applied to liquid-based cytology (LBC), the suspension of cells collected from the cervix. DNA methylation changes occur very early in carcinogenesis and identification of appropriate DNA methylation markers in such samples should be able to distinguish high-grade squamous intraepithelial lesions (HSIL) front nonspecific cytology changes and the normal cervix. To address this potential, we have undertaken a proof-of-principle study of methylation status of LBC samples from HSIL cytology cases compared against matched normal controls. Using quantitative methylation-specific PCR on 28 genes, we found SOX1, HOXA11 and CADMI to significantly discriminate between the groups analyzed (p < 0.01). Area under the receiver operating characteristic (ROC) curve (AUC) demonstrated that methylation of SOX1, HOXA11 and CADMI could discriminate between HSIL cases and controls with high sensitivity and specificity (AUC 0.910, 0.844 and 0.760, respectively). The results were further validated in an independent set. This proof-of-principle study is the first to validate the results in an independent case/control set and presents HOXA11, a gene that is important for cervical development, as a potentially useful DNA marker in LBC samples. Further assessment of these preliminary estimates will need to be performed in a larger cohort to confirm clinical utility. (C) 2009 UICC
- Published
- 2009
41. Serum oestrogen receptor α and β bioactivity are independently associated with breast cancer: a proof of principle study
- Author
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Hella Lichtenberg-Fraté, Guido Hasenbrink, Anne Dawnay, A Lam, Hermann Brenner, Martin Widschwendter, Usha Menon, Elke Raum, Sarah Schwarzer, C Stegmaier, Sophia Apostolidou, and Ian Jacobs
- Subjects
Transcriptional Activation ,Cancer Research ,medicine.medical_specialty ,Estrogen receptor ,Breast Neoplasms ,Biology ,Response Elements ,breast cancer ,Breast cancer ,Predictive Value of Tests ,Risk Factors ,Internal medicine ,medicine ,Estrogen Receptor beta ,Humans ,skin and connective tissue diseases ,Receptor ,Molecular Diagnostics ,Estrogen receptor beta ,Aged ,risk ,Estradiol ,Estrogen Receptor alpha ,Cancer ,Middle Aged ,medicine.disease ,oestrogen receptor ,Postmenopause ,Endocrinology ,Oncology ,Case-Control Studies ,Female ,serum bioactivity ,Breast disease ,Estrogen receptor alpha ,Hormone - Abstract
Oestrogens play a crucial role in breast carcinogenesis. Earlier studies have analysed the serum levels of endogenous hormones measured by conventional assays. In this study, we analysed the capacity of serum from breast cancer cases and controls to transactivate the oestrogen receptor alpha (ER-alpha) and beta (ER-beta).We used a receptor oestrogen-responsive element (ERE) -- the green fluorescent protein (GFP)-reporter test system in Saccharomyces cerevisiae. Oestrogen receptor-alpha or ER-beta bioactivity was determined in serum from 182 randomly chosen postmenopausal women with breast cancer and from 188 age-matched controls.High serum ER-alpha and ER-beta bioactivity were independently associated with the presence of breast cancer. Women whose levels of serum ER-alpha and ER-beta bioactivity were in the highest quintile among controls had a 7.57-(95% confidence interval (CI): 2.46-23.32; P=0.0004) and a 10.14 (95% CI: 3.19-32.23; P0.0001)-fold risk for general and oestrogen receptor-positive breast cancer, respectively.The use of serum ER-alpha and ER-beta bioactivity assays as clinical tools in the management of breast cancer warrants further research. Future studies will dictate whether surrogate markers of ER-alpha and ER-beta bioactivity will provide a means to monitor the efficacy of anti-endocrine, adjuvant and chemopreventive strategies.
- Published
- 2009
42. DNA methylation of polycomb group target genes in cores taken from breast cancer centre and periphery
- Author
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Usha Menon, Ian Jacobs, Sophia Apostolidou, Evangelia-Ourania Fourkala, Martin Widschwendter, Allison Jones, Heidi Fiegl, Cornelia Hauser-Kronberger, Roland Reitsamer, Matthew Burnell, and Johannes Grall
- Subjects
Cancer Research ,Pathology ,medicine.medical_specialty ,Tumour heterogeneity ,Polycomb-Group Proteins ,Breast Neoplasms ,Biology ,Breast cancer ,Basic Helix-Loop-Helix Transcription Factors ,Biomarkers, Tumor ,medicine ,Humans ,RNA, Messenger ,Gene ,Neoplasm Staging ,Reverse Transcriptase Polymerase Chain Reaction ,Cancer ,Methylation ,DNA Methylation ,Middle Aged ,medicine.disease ,Repressor Proteins ,ROC Curve ,Oncology ,Area Under Curve ,DNA methylation ,Cancer research ,Female ,Breast disease ,Ovarian cancer - Abstract
We previously demonstrated that methylation of neugogenic differentiation 1 (NEUROD1) gene, a polycomb group target (PCGT) gene is a predictor of response to neoadjuvant chemotherapy in breast cancer. Here, we address the question whether NEUROD1 methylation provides clinical information independent from its expression level, and whether PCGT methylation is homogeneous in breast cancer. We examined: (1) NEUROD1 methylation and mRNA expression in 9 breast cancer cell lines and 63 tumour specimens, (2) DNA methylation in a training set of 55 PCGT genes taken from the centre (TUC) and periphery (TUP) of 15 breast cancer specimens, and compared this with 22 non neoplastic controls, and finally, (3) validated statistically significant genes in an independent set of 20 cases versus 18 controls. 8/9 cell lines demonstrated NEUROD1 methylation, whereas, there was only one cell-line that showed NEUROD1 expression. There was no association between methylation and expression in breast tumour specimens, with only 14% exhibiting NEUROD1 expression. Of the 55 PCGT genes analysed, 24% (13/55) were shown to be cancer specific (p0.05) with a receiver-operating-characteristic (ROC) area-under-the-curve (AUC) of0.7 (range 0.71-0.95). DNA methylation accurately predicted the presence of cancer in both TUC and TUP. DNA methylation of PCGT genes predicts the presence of breast cancer and is not subject to tumour heterogeneity. Further work will reveal if methylation of PCGT genes will serve as a robust means for the clinical detection and assessment of breast cancer.
- Published
- 2009
43. Hybridization of binary monolayers of single stranded oligonucleotides and short blocking molecules
- Author
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Inger Vikholm-Lundin, Heidi Fiegl, Sophia Apostolidou, Sanna Auer, and Tony Munter
- Subjects
Base pair ,Analytical chemistry ,law.invention ,chemistry.chemical_compound ,SDG 3 - Good Health and Well-being ,law ,Monolayer ,Materials Chemistry ,Surface plasmon resonance ,hybridization ,Polymerase chain reaction ,oligonucleotides ,Oligonucleotide ,self-assembly ,Surfaces and Interfaces ,Amplicon ,Condensed Matter Physics ,Surfaces, Coatings and Films ,Crystallography ,chemistry ,immobilization ,Biosensor ,surface plasmon resonance ,DNA - Abstract
We have studied the immobilization of single stranded (ss) DNA oligonucleotides of 16-27 base pairs on gold. The oligonucleotides were thiol-modified (SH-ssDNA) or disulfide-modified via a dimethoxytrityl-group (DMT-S-S-ssDNA). Immobilization was performed by adsorption of the probes on the gold surface for 10-15 min, a time within which saturation coverage was obtained for both thiol- and disulfide-modified probes. Hereafter the layer was post-treated with hydroxyalkyl substituted lipoamides also for a time of 10-15 min. The surface density of layers with shorter probes (16-18 met) was twice (2.4 +/- 0.2 x 10(13) probes/cm(2)) that of the longer probes (25-27 met) as studied with surface plasmon resonance. Hybridization of single stranded polymerase chain reaction (PCR) amplified products with a length above 300 base pairs gave a very low hybridization response. For amplicons with about 100 base pairs the response was high. The surface coverage was comparable to that of complementary ssDNA binding (3.0 x 10(12) strands/cm(2)). Surfaces made from SH-ssDNA showed a 30% higher hybridization response than surfaces made from DMT-S-S-ssDNA. The PCR amplified products used are of relevance in breast cancer diagnosis. The results clearly demonstrate that the single stranded PCR products might be used in label-free cancer diagnostics. (C) 2009 Elsevier B.V. All rights reserved.
- Published
- 2009
44. FBXW7/hCDC4 Is a General Tumor Suppressor in Human Cancer
- Author
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Shahab, Akhoondi, Dahui, Sun, Natalie, von der Lehr, Sophia, Apostolidou, Kathleen, Klotz, Alena, Maljukova, Diana, Cepeda, Heidi, Fiegl, Dimitra, Dafou, Dimitra, Dofou, Christian, Marth, Elisabeth, Mueller-Holzner, Martin, Corcoran, Markus, Dagnell, Sepideh Zabihi, Nejad, Babak Noori, Nayer, Mohammad Reza, Zali, Johan, Hansson, Susanne, Egyhazi, Fredrik, Petersson, Per, Sangfelt, Hans, Nordgren, Dan, Grander, Steven I, Reed, Martin, Widschwendter, Olle, Sangfelt, and Charles, Spruck
- Subjects
Models, Molecular ,Cancer Research ,F-Box-WD Repeat-Containing Protein 7 ,Tumor suppressor gene ,Cell division ,Ubiquitin-Protein Ligases ,Cell Cycle Proteins ,Biology ,Protein degradation ,Substrate Specificity ,law.invention ,law ,Neoplasms ,medicine ,Humans ,Protein Isoforms ,Genes, Tumor Suppressor ,Gene Silencing ,Cell division control protein 4 ,Dinucleotide Repeats ,Amination ,Regulation of gene expression ,F-Box Proteins ,Cancer ,DNA Methylation ,medicine.disease ,Gene Expression Regulation, Neoplastic ,Oncology ,Mutation ,5-Methylcytosine ,Cancer research ,Suppressor ,Regulatory Pathway - Abstract
The ubiquitin-proteasome system is a major regulatory pathway of protein degradation and plays an important role in cellular division. Fbxw7 (or hCdc4), a member of the F-box family of proteins, which are substrate recognition components of the multisubunit ubiquitin ligase SCF (Skp1-Cdc53/Cullin-F-box-protein), has been shown to mediate the ubiquitin-dependent proteolysis of several oncoproteins including cyclin E1, c-Myc, c-Jun, and Notch. The oncogenic potential of Fbxw7 substrates, frequent allelic loss in human cancers, and demonstration that mutation of FBXW7 cooperates with p53 in mouse tumorigenesis have suggested that Fbxw7 could function as a tumor suppressor in human cancer. Here, we carry out an extensive genetic screen of primary tumors to evaluate the role of FBXW7 as a tumor suppressor in human tumorigenesis. Our results indicate that FBXW7 is inactivated by mutation in diverse human cancer types with an overall mutation frequency of ∼6%. The highest mutation frequencies were found in tumors of the bile duct (cholangiocarcinomas, 35%), blood (T-cell acute lymphocytic leukemia, 31%), endometrium (9%), colon (9%), and stomach (6%). Approximately 43% of all mutations occur at two mutational “hotspots,” which alter Arg residues (Arg465 and Arg479) that are critical for substrate recognition. Furthermore, we show that Fbxw7Arg465 hotspot mutant can abrogate wild-type Fbxw7 function through a dominant negative mechanism. Our study is the first comprehensive screen of FBXW7 mutations in various human malignancies and shows that FBXW7 is a general tumor suppressor in human cancer. [Cancer Res 2007;67(19):9006–12]
- Published
- 2007
45. Circulating tenascin C levels distinguish pancreatic cancer from chronic pancreatitis and correlate with pancreatic stromal expression
- Author
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Lawrence N. Barrera, William Greenhalf, Fiona Campbell, Neal Rimmer, John F. Timms, Evangelia-Ourania Fourkala, Aleksandra Gentry-Maharaj, Eithne Costello, Elizabeth Garner, Sophia Apostolidou, Claire Jenkinson, Anthony Evans, Usha Menon, Frances Oldfield, John P. Neoptolemos, and Ian Jacobs
- Subjects
Oncology ,medicine.medical_specialty ,Stromal cell ,Hepatology ,biology ,business.industry ,Endocrinology, Diabetes and Metabolism ,Tenascin C ,Gastroenterology ,medicine.disease ,Pancreatic cancer ,Internal medicine ,medicine ,Cancer research ,biology.protein ,Pancreatitis ,CA19-9 ,business - Published
- 2016
46. Socioeconomic inequalities in mortality in national sample of English women: the UKCTOCS Study
- Author
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Katharine Bailey, Matthew Burnell, Evangelia-Ourania Fourkala, Usha Menon, Andy Ryan, Hynek Pikhart, Sophia Apostolidou, Ian Jacobs, M. Parmar, A Gentry-Maharaj, and Jatinderpal Kalsi
- Subjects
Gerontology ,Cancer mortality ,business.industry ,Environmental health ,Public Health, Environmental and Occupational Health ,Medicine ,Sample (statistics) ,Multiple deprivation ,Health outcomes ,business ,Socioeconomic status ,Socioeconomic inequalities - Abstract
Background Area-level socioeconomic indicators have been shown to be associated with range of health outcomes. However, only few studies have been able to examine the role of area-level indicators alongside individual-level indicators in large national samples. The aim of this project is to assess the role of Index of Multiple Deprivation (IMD) as well as range of individual factors on all-cause, CVD and cancer mortality in sample of women resident in …
- Published
- 2014
47. Validity of self-reported hysterectomy: a prospective cohort study within the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
- Author
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Aleksandra, Gentry-Maharaj, Henry, Taylor, Jatinderpal, Kalsi, Andy, Ryan, Matthew, Burnell, Aarti, Sharma, Sophia, Apostolidou, Stuart, Campbell, Ian, Jacobs, and Usha, Menon
- Subjects
Ovarian Neoplasms ,Epidemiology ,Research ,Ovary ,Uterus ,Middle Aged ,Hysterectomy ,United Kingdom ,Pelvis ,Gynaecology ,Endometrium ,Oncology ,Surveys and Questionnaires ,Obstetrics and Gynaecology ,Humans ,Female ,Prospective Studies ,Self Report ,Aged ,Ultrasonography - Abstract
Objective To evaluate the validity of self-reported hysterectomy against the gold standard of uterine visualisation using pelvic ultrasound. Design Prospective cohort study. Setting UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) based in 13 National Health Service (NHS) Trusts in England, Wales and Northern Ireland. Participants Between April 2001 and October 2005, 48 215 postmenopausal women aged 50–74 randomised to the ultrasound screening arm of UKCTOCS underwent the first (initial) scan on the trial. Interventions At recruitment, the women completed a recruitment questionnaire (RQ) which included previous hysterectomy. The sonographer asked each woman regarding previous hysterectomy (interview format, IF) prior to the scan. At the scan, in addition to ovarian morphology, endometrial thickness (ET)/endometrial abnormality were captured if the uterus was visualised at the scan. Outcome measures Self-reported hysterectomy at RQ or IF was compared to ultrasound data on ET/endometrial abnormality (as surrogate uterine visualisation markers) on the first (initial) scan. Results Of 48 215 women, 3 had congenital uterine agenesis and 218 inconclusive results. The uterus was visualised in 39 121 women. 8871 self-reported hysterectomy at RQ, 8641 at IF and 8487 at both. The uterus was visualised in 39 123, 39 353 and 38 969 women not self-reporting hysterectomy at RQ, IF or both. Validity, sensitivity, specificity, positive predictive value and negative predictive value of using RQ alone, IF or both RQ/IF were 99.6%, 98.9%, 99.7%, 98.9% and 99.7%; 98.9%, 98.4%, 99.1%, 95.9% and 99.7%; 99.8%, 99.6%, 99.9%, 99.4% and 99.9%, respectively. Conclusions Self-reported hysterectomy is a highly accurate and valid source for studying long-term associations of hysterectomy with disease onset. Trial registration International Standard Randomised Controlled Trial Number (ISRCTN)—22488978
- Published
- 2014
48. Loss of imprinting and aberrant methylation of IGF2 in placentas from pregnancies complicated with fetal growth restriction
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Giannoula Soufla, Ourania Koukoura, Demetrios A. Spandidos, Martin Widschwendter, Sophia Apostolidou, Stavros Sifakis, Apostolos Zaravinos, and Allison Jones
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medicine.medical_specialty ,animal structures ,Genotype ,endocrine system diseases ,Placenta ,Biology ,Preeclampsia ,Genomic Imprinting ,Insulin-Like Growth Factor II ,Pregnancy ,Internal medicine ,Genetics ,medicine ,Humans ,Epigenetics ,Imprinting (psychology) ,Fetal Growth Retardation ,Reverse Transcriptase Polymerase Chain Reaction ,General Medicine ,Methylation ,DNA Methylation ,medicine.disease ,female genital diseases and pregnancy complications ,medicine.anatomical_structure ,Endocrinology ,Differentially methylated regions ,embryonic structures ,DNA methylation ,Female ,Genomic imprinting - Abstract
The objective of this study was to investigate the hypothesis that the altered epigenetic mechanisms that regulate IGF2 imprinting in placentas from fetal growth restricted (FGR) pregnancies affect IGF2 expression leading to impaired fetal growth. We investigated gene transcription, genotyping and the methylation patterns of IGF2 from 31 and 17 placentas from FGR-complicated and normal pregnancies, respectively. A statistically significant decrease in IGF2 mRNA levels was observed in the placentas from the FGR pregnancies. Loss of imprinting (LOI) was only detected in the abnormal placentas. The evaluation of the percentage of the methylated reference (PMR) of two different potentially differentially methylated regions (DMR) demonstrated significant PMR values in both sites for the normal and FGR pregnancies with no significant differences. Our results suggest the involvement of the IGF2 imprinted gene in placental function and fetal growth and the possible association of epigenetic alterations with the pathophysiology of fetal growth restriction.
- Published
- 2011
49. Impact on mortality and cancer incidence rates of using random invitation from population registers for recruitment to trials
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Aleksandra Gentry-Maharaj, John Murdoch, Stephen Dobbs, Keith M. Godfrey, Karin Williamson, Jatinderpal Kalsi, Howard Jenkins, Mariam Habib, Stuart Campbell, Simon Leeson, Robert Woolas, Steven J. Skates, Jonathan Herod, Nazar Najib Amso, Usha Menon, Andrew M. Ryan, Sophia Apostolidou, Ian Jacobs, Derek Cruickshank, Matthew Burnell, David H. Oram, Mahesh K. B. Parmar, Lesley Fallowfield, Mourad W Seif, and Tim Mould
- Subjects
medicine.medical_specialty ,Time Factors ,Population ,Medicine (miscellaneous) ,Risk Assessment ,Body Mass Index ,RC0254 ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Epidemiology ,medicine ,Humans ,Mass Screening ,Pharmacology (medical) ,030212 general & internal medicine ,Registries ,education ,Socioeconomic status ,Mass screening ,Aged ,Gynecology ,Ovarian Neoplasms ,lcsh:R5-920 ,education.field_of_study ,BODY-MASS INDEX, EARLY BILATERAL OOPHORECTOMY, SOCIOECONOMIC-STATUS, PREVENTION TRIALS, SCREENING TRIAL, LUNG, EPIDEMIOLOGY, BREAST, ASSOCIATION, DEPRIVATION ,business.industry ,Incidence (epidemiology) ,Incidence ,Patient Selection ,Research ,Age Factors ,Middle Aged ,United Kingdom ,3. Good health ,Postmenopause ,Cancer incidence ,Socioeconomic Factors ,030220 oncology & carcinogenesis ,Female ,lcsh:Medicine (General) ,business ,Risk assessment ,Body mass index ,Demography - Abstract
Background Participants in trials evaluating preventive interventions such as screening are on average healthier than the general population. To decrease this 'healthy volunteer effect' (HVE) women were randomly invited from population registers to participate in the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) and not allowed to self refer. This report assesses the extent of the HVE still prevalent in UKCTOCS and considers how certain shortfalls in mortality and incidence can be related to differences in socioeconomic status. Methods Between 2001 and 2005, 202 638 postmenopausal women joined the trial out of 1 243 312 women randomly invited from local health authority registers. The cohort was flagged for deaths and cancer registrations and mean follow up at censoring was 5.55 years for mortality, and 2.58 years for cancer incidence. Overall and cause-specific Standardised Mortality Ratios (SMRs) and Standardised Incidence Ratios (SIRs) were calculated based on national mortality (2005) and cancer incidence (2006) statistics. The Index of Multiple Deprivation (IMD 2007) was used to assess the link between socioeconomic status and mortality/cancer incidence, and differences between the invited and recruited populations. Results The SMR for all trial participants was 37%. By subgroup, the SMRs were higher for: younger age groups, extremes of BMI distribution and with each increasing year in trial. There was a clear trend between lower socioeconomic status and increased mortality but less pronounced with incidence. While the invited population had higher mean IMD scores (more deprived) than the national average, those who joined the trial were less deprived. Conclusions Recruitment to screening trials through invitation from population registers does not prevent a pronounced HVE on mortality. The impact on cancer incidence is much smaller. Similar shortfalls can be expected in other screening RCTs and it maybe prudent to use the various mortality and incidence rates presented as guides for calculating event rates and power in RCTs involving women. Trial Registration This study is registered as an International Standard Randomised Controlled Trial, number ISRCTN22488978. Medical Research Council (grant no. G990102), Cancer Research UK (grant no. C1479/A2884) and Department of Health
- Published
- 2010
50. Hypomethylation along with increased H19 expression in placentas from pregnancies complicated with fetal growth restriction
- Author
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Ourania Koukoura, Martin Widschwendter, Stavros Sifakis, Jiannis Hajiioannou, Allison Jones, Apostolos Zaravinos, Demetrios A. Spandidos, and Sophia Apostolidou
- Subjects
Adult ,Male ,medicine.medical_specialty ,Beckwith-Wiedemann Syndrome ,RNA, Untranslated ,Genotype ,Placenta ,Down-Regulation ,Gene Expression ,Biology ,Exon ,Genomic Imprinting ,Young Adult ,Pregnancy ,Internal medicine ,Gene expression ,medicine ,Humans ,Epigenetics ,Fetal Growth Retardation ,Obstetrics and Gynecology ,Promoter ,Methylation ,DNA Methylation ,female genital diseases and pregnancy complications ,Silver-Russell Syndrome ,Endocrinology ,medicine.anatomical_structure ,Reproductive Medicine ,embryonic structures ,DNA methylation ,Female ,RNA, Long Noncoding ,Genomic imprinting ,Developmental Biology - Abstract
The expression of imprinted genes is regulated by epigenetic modifications, such as DNA methylation. Many imprinted genes are expressed in the placenta and affect nutrient transfer capacity of the placental exchange barrier. The H19 gene is abundantly expressed by the human placenta and is implicated in the pathogenesis of congenital growth disorders such as Beckwith-Wiedemann (BWS) and Silver-Russell (SRS) syndromes. The aim of this study was to investigate the role of DNA methylation on H19 transcription and imprinting, in the pathophysiology of fetal growth restriction (FGR). Thirty one and 17 placentas from FGR-complicated and normal pregnancies were collected, respectively. We studied gene transcription, genotyping and methylation analysis of the AluI H19 on exon 5 polymorphism. Placental expression levels of H19 were significantly increased in the FGR group. The H19 mRNA levels were similar between normal placental samples that demonstrated loss and maintenance of imprinting. Placentas from growth-restricted pregnancies had lower methylation levels compared to normals, in the H19 promoter region. We have demonstrated an increased H19 transcription in the FGR group of placentas. The hypomethylation of the H19 promoters is compatible with the aberrant expression. The association of these two findings is reported for the first time in placental tissues, however, its significance remains unknown. Whether the results of this study represent an adaptation of the placenta to hypoperfusion, or they are part of FGR pathophysiology has to be further investigated.
- Published
- 2010
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