6 results on '"Soer, E C"'
Search Results
2. Scoring of tumour response after neoadjuvant therapy in resected pancreatic cancer: systematic review
- Author
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van Roessel, S, primary, Janssen, B V, additional, Soer, E C, additional, Fariña Sarasqueta, A, additional, Verbeke, C S, additional, Luchini, C, additional, Brosens, L A A, additional, Verheij, J, additional, and Besselink, M G, additional
- Published
- 2021
- Full Text
- View/download PDF
3. Crossing borders: A systematic review with quantitative analysis of genetic mutations of carcinomas of the biliary tract
- Author
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Roos, E, Soer, E C, Klompmaker, S, Meijer, Laura, Besselink, M G, Giovannetti, E, Heger, M, Kazemier, G, Klümpen, H J, Takkenberg, R B, Wilmink, H, Würdinger, T, Dijk, F, van Gulik, T M, Verheij, J, van de Vijver, M J, Afd Pharmaceutics, Sub Membrane Biochemistry & Biophysics, Pharmaceutics, Afd Pharmaceutics, Sub Membrane Biochemistry & Biophysics, and Pharmaceutics
- Subjects
0301 basic medicine ,Phosphofructokinase-2/genetics ,Biliary Tract Neoplasms/genetics ,Chromogranins/genetics ,Phosphofructokinase-2 ,Cell of origin ,Isocitrate Dehydrogenase/genetics ,Phosphoric Monoester Hydrolases/genetics ,Receptor, Transforming Growth Factor-beta Type II/genetics ,Cholangiocarcinoma ,0302 clinical medicine ,Neoplasm Proteins/genetics ,GTP-Binding Protein alpha Subunits, Gs ,Medicine ,biology ,Hematology ,GTP-Binding Protein alpha Subunits ,Isocitrate Dehydrogenase ,Neoplasm Proteins ,medicine.anatomical_structure ,Biliary Tract Neoplasms ,Oncology ,Biliary tract ,030220 oncology & carcinogenesis ,Cholangiocarcinoma/genetics ,Receptor ,GTP-Binding Protein alpha Subunits, Gs/genetics ,IDH1 ,Adenomatous Polyposis Coli Protein ,Genomics ,IDH2 ,Transforming Growth Factor-beta Type II/genetics ,03 medical and health sciences ,GNAS complex locus ,Chromogranins ,Humans ,Adenomatous Polyposis Coli Protein/genetics ,Membrane Proteins/genetics ,Gene ,business.industry ,Gallbladder ,Receptor, Transforming Growth Factor-beta Type II ,Membrane Proteins ,Phosphoric Monoester Hydrolases ,Gs/genetics ,030104 developmental biology ,Mutation ,Cancer research ,biology.protein ,business - Abstract
Biliary tract carcinoma (BTC) comprises gallbladder and intra-/extrahepatic cholangiocarcinoma (GBC, ICC, EHC), which are currently classified by anatomical origin. Better understanding of the mutational profile of BTCs might refine classification and improve treatment. We performed a systematic review of studies reporting on mutational profiling of BTC. We included articles reporting on whole-exome/whole-genome-sequencing (WES/WGS) and targeted sequencing (TS) of BTC, published between 2000-2017. Pooled mutation proportions were calculated, stratified by anatomical region and sequencing technique. A total of 25 studies with 1806 patients were included. Overall, TP53 was the most commonly mutated gene in BTC. GBC was associated with mutations in PFKFB3, PLXN2 and PGAP1. Mutations in IDH1, IDH2 and FGFR fusions almost exclusively occurred in ICC patients. Mutations in APC, GNAS and TGFBR2 occurred exclusively in EHC patients. In conclusion, subtypes of BTCs exhibit minor differences in mutational profile, which is likely influenced by the cell of origin.
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- 2019
- Full Text
- View/download PDF
4. Crossing borders: A systematic review with quantitative analysis of genetic mutations of carcinomas of the biliary tract
- Author
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Afd Pharmaceutics, Sub Membrane Biochemistry & Biophysics, Pharmaceutics, Roos, E, Soer, E C, Klompmaker, S, Meijer, Laura, Besselink, M G, Giovannetti, E, Heger, M, Kazemier, G, Klümpen, H J, Takkenberg, R B, Wilmink, H, Würdinger, T, Dijk, F, van Gulik, T M, Verheij, J, van de Vijver, M J, Afd Pharmaceutics, Sub Membrane Biochemistry & Biophysics, Pharmaceutics, Roos, E, Soer, E C, Klompmaker, S, Meijer, Laura, Besselink, M G, Giovannetti, E, Heger, M, Kazemier, G, Klümpen, H J, Takkenberg, R B, Wilmink, H, Würdinger, T, Dijk, F, van Gulik, T M, Verheij, J, and van de Vijver, M J
- Published
- 2019
5. Expression of integrin ανβ6 differentiates perihilar cholangiocarcinoma (PHC) from benign disease mimicking PHC.
- Author
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Franken LC, Vuijk FA, Soer EC, Roos E, Erdmann JI, Hooijer GKJ, Vahrmeijer AL, Gambhir SS, van Gulik TM, Sarasqueta AF, Verheij J, and Swijnenburg RJ
- Subjects
- Bile Duct Neoplasms diagnosis, Bile Duct Neoplasms pathology, Bile Ducts, Intrahepatic, Carcinoma, Hepatocellular diagnosis, Carcinoma, Hepatocellular pathology, Cholangiocarcinoma diagnosis, Cholangiocarcinoma pathology, Diagnosis, Differential, Female, Humans, Immunohistochemistry, Klatskin Tumor diagnosis, Klatskin Tumor pathology, Liver Diseases diagnosis, Liver Diseases metabolism, Liver Diseases pathology, Liver Neoplasms diagnosis, Liver Neoplasms pathology, Male, Middle Aged, Molecular Imaging, Optical Imaging, Positron Emission Tomography Computed Tomography, Tissue Array Analysis, Antigens, Neoplasm metabolism, Bile Duct Neoplasms metabolism, Carcinoma, Hepatocellular metabolism, Cholangiocarcinoma metabolism, Integrins metabolism, Klatskin Tumor metabolism, Liver Neoplasms metabolism
- Abstract
Background: Approximately 15% of patients undergoing resection for presumed perihilar cholangiocarcinoma (PHC) have benign disease at final pathological assessment. Molecular imaging targeting tumor-specific biomarkers could serve as a novel diagnostic tool to reduce these futile surgeries. Imaging agents have been developed, selectively binding integrin α
ν β6, a cell receptor upregulated in pancreatobiliary malignancies, for both (preoperative) PET and (intraoperative) fluorescent imaging. Here, expression of integrin αν β6 is evaluated in PHC, intrahepatic cholangiocarcinoma (ICC), hepatocellular carcinoma (HCC) and benign disease mimicking PHC using immunohistochemistry., Materials & Methods: Three tissue microarrays (TMA) including 103 PHC tumor cores and sixty tissue samples were selected from resection specimens of pathologically proven PHC (n = 20), ICC (n = 10), HCC (n = 10), metastatic PHC lymph nodes (n = 10) and benign disease (presumed PHC with benign disease at pathological assessment, n = 10). These samples were stained for integrin αν β6 and quantified using the H-score., Results: Immunohistochemical staining for integrin αν β6 showed membranous expression in all twenty PHC whole mount slides (100%) and 93 out of 103 (92%) PHC tumor cores. Mean H-score of PHC samples was 195 ± 71, compared to a mean H-score of 126 ± 57 in benign samples (p = 0.013). In both benign and PHC samples, inflammatory infiltrates and pre-existent peribiliary glands showed integrin αν β6 expression. The mean H-score across ten ICC was 33 ± 53, which was significantly lower compared to PHC (p < 0.001) but too weak to consistently discriminate ICC from HCC (H-score 0)(p = 0.062)., Conclusion: Integrin αν β6 is abundantly expressed in PHC and associated metastatic lymph nodes. Expression is significantly higher in PHC as compared to benign disease mimicking PHC, ICC and HCC, emphasizing its potential as a target for tumor-specific molecular imaging., Competing Interests: Declaration of competing interests The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.)- Published
- 2021
- Full Text
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6. Clinical value of ctDNA in upper-GI cancers: A systematic review and meta-analysis.
- Author
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Creemers A, Krausz S, Strijker M, van der Wel MJ, Soer EC, Reinten RJ, Besselink MG, Wilmink JW, van de Vijver MJ, van Noesel CJM, Verheij J, Meijer SL, Dijk F, Bijlsma MF, van Oijen MGH, and van Laarhoven HWM
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- Esophageal Neoplasms genetics, Esophageal Neoplasms mortality, Humans, Pancreatic Neoplasms genetics, Pancreatic Neoplasms mortality, Prognosis, Proto-Oncogene Proteins p21(ras) genetics, Receptor, ErbB-2 genetics, Stomach Neoplasms genetics, Stomach Neoplasms mortality, Biomarkers, Tumor analysis, Circulating Tumor DNA analysis, Esophageal Neoplasms diagnosis, Pancreatic Neoplasms diagnosis, Stomach Neoplasms diagnosis
- Abstract
Background: The recent expanding technical possibilities to detect tumor derived mutations in blood, so-called circulating tumor DNA (ctDNA), has rapidly increased the interest in liquid biopsies. This review and meta-analysis explores the clinical value of ctDNA in malignancies of the upper gastro-intestinal tract., Methods: PubMed, Cochrane and Embase databases were searched to identify studies reporting the diagnostic, prognostic or predictive value of ctDNA in patients with esophageal, gastric and pancreatic cancer, until January 2017. The diagnostic accuracy and, using random-effect pair-wise meta-analyses, the prognostic value of ctDNA was assessed., Results: A total of 34 studies met the inclusion criteria. For esophageal and gastric cancer, amplification of oncogenes in blood, such as HER2 and MYC, can be relevant for diagnostic purposes, and to predict treatment response in certain patient subpopulations. Given the limited number of studies assessing the role of ctDNA in esophageal and gastric cancer, the meta-analysis estimated the diagnostic accuracy and predictive value of ctDNA in pancreatic cancer only (n=10). The pooled sensitivity and specificity of ctDNA as a diagnostic tool in pancreatic cancer were 28% and 95%, respectively. Patients with pancreatic cancer and detectable ctDNA demonstrated a worse overall survival compared to patients with undetectable ctDNA (HR 1.92, 95% confidence interval (CI) 1.15-3.22, p=0.01)., Conclusion: The presence of ctDNA is significantly associated with a poor prognosis in patients with pancreatic cancer. The use of ctDNA in clinical practice is promising, although standardization of sequencing techniques and further development of high-sensitive detection methods is needed., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
- Full Text
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