20 results on '"Smith, Ethan D."'
Search Results
2. Student Perceptions of Providers' Cultural Competence, Attitudes towards Providers, and Patient Satisfaction at a University Health Center: International and U.S. Student Differences
- Author
-
Hudak, Nicole C., Carmack, Heather J., and Smith, Ethan D.
- Abstract
The present study surveyed international and domestic U.S. students about their perceptions of university health care providers' cultural competence, their own attitudes toward university health center providers, and overall satisfaction with university health center providers. Results demonstrated generally positive attitudes and satisfaction, but more negative perceptions of provider cultural competence were identified especially when students perceived problems with providers' language competence and interest in learning about patients' backgrounds. International students reported more positive attitudes concerning providers' cultural competence than U.S. students. Implications of the findings are discussed, along with limitations of the study and suggestions for future research.
- Published
- 2018
3. Hyperacetylation mimetics within the tau filament core inhibits prion-like propagation of misfolded tau
- Author
-
Smith, Ethan D, primary, McKenna, Robert, additional, Mietzsch, Mario, additional, Borchelt, David R, additional, Prokop, Stefan, additional, and Chakrabarty, Paramita, additional
- Published
- 2024
- Full Text
- View/download PDF
4. Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions
- Author
-
Baptista, Rodrigo P., primary, Li, Yiran, additional, Sateriale, Adam, additional, Sanders, Mandy J., additional, Brooks, Karen L., additional, Tracey, Alan, additional, Ansell, Brendan R.E., additional, Jex, Aaron R., additional, Cooper, Garrett W., additional, Smith, Ethan D., additional, Xiao, Rui, additional, Dumaine, Jennifer E., additional, Georgeson, Peter, additional, Pope, Bernard J., additional, Berriman, Matthew, additional, Striepen, Boris, additional, Cotton, James A., additional, and Kissinger, Jessica C., additional
- Published
- 2021
- Full Text
- View/download PDF
5. Understanding the Impact of High Aspect Ratio Nanoparticles on Desalination Membrane Performance
- Author
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Smith, Ethan D., Chemical Engineering, Martin, Stephen M., Foster, Earl Johan, Deshmukh, Sanket A., and Ducker, William A.
- Subjects
desalination ,nanocomposite ,metal-organic framework ,membrane ,cellulose nanomaterials - Abstract
Access to clean water is one of the world's foremost challenges that has been addressed on a large scale by membrane-based separation processes for the last six decades. Commercial membrane technology within one operation, reverse osmosis, has remained consistent since the late 1970s, however within the last two decades, access to nanotechnology has created a realm of study involving thin film nanocomposite (TFN) membranes, in which nanoparticles are incorporated into existing membrane designs. Desirable properties of the nanoparticles may positively impact qualities of the membrane like performance, anti-fouling behavior, and physical strength. In the present work, two types of nanoparticles have been evaluated for their potential as TFN additives: cellulose nanocrystals (CNCs) and metal-organic framework (MOF) nanorods. CNCs were chosen due to their high aspect ratios, mechanical strength, and potential for surface functionalization. MOF nanorods are also of interest given their aspect ratios and potential for functionalization, but they also possess defined pores, the sizes of which may be tuned with post-synthetic modification. Both CNCs and MOF nanorods were incorporated into TFN membranes via interfacial polymerization, and the resulting membranes were characterized using a variety of techniques to establish their performances, but also to gain insight into how the presence of each nanoparticle might be affecting the membrane active layer formation. A resulting CNC membrane (0.5 wt% loading) exhibited a 160% increase in water flux and an improvement in salt rejection to 98.98 ± 0.41 % compared to 97.53 ± 0.31 % for a plain polyamide control membrane. Likewise, a MOF nanorod membrane (0.01 wt% loading) with a high ratio of acid chain modification exhibited a 95% flux increase with maintained high salt rejection. For the CNCs, the flux increase is attributed to the formation of nanoscale voids along the length of each particle that form during the interfacial polymerization. These nanochannels introduce new rapid water transport pathways within the active layer of each membrane while maintaining ion rejection. The proposed mechanism for the MOF nanorods also introduces nanochannels into each membrane, but the presence of each nanorod's pore structure may offer another transport pathway for water molecules, one that varies with pore size. In combination, these results have allowed the study of molecular transport of water molecules and various ion species within the active layer of a thin film composite RO membrane. Understanding these phenomena will allow the development of smarter membrane materials to address present-day and future separations challenges. Carbon nanotubes are also demonstrated as surface modifiers for forward osmosis (FO) membranes to address issues unique to the FO process, namely reverse solute flux (RSF). This method shows promise, as a coating density of 0.97 g/m2 reduced RSF for many draw solution species, including a 55% reduction for sodium chloride. Doctor of Philosophy Access to clean water is one of the world's foremost challenges that has been addressed on a large scale by membrane-based separation processes for the last six decades. Commercial membrane technology within one operation, reverse osmosis, has remained consistent since the late 1970s, however within the last two decades, access to nanotechnology has created a recent realm of study in which nanoparticles are incorporated into existing membrane designs. It is desired to use nanotechnology, or nanoparticles to improve membrane performance, i.e. create a membrane with better rejection of unwanted ions or contaminants or improve the amount of water that passes through the membrane. In the present work, two types of nanoparticles have been evaluated for their potential as TFN additives: cellulose nanocrystals (CNCs) and metal-organic framework (MOF) nanorods. Both CNCs and MOF nanorods were incorporated into membranes and the resulting membranes were characterized using a variety of techniques to establish how the nanoparticles affected performance. A resulting CNC membrane (0.5 wt% loading) exhibited a 160% increase in water flux (the amount of water passing through an area in a given amount of time) and an improvement in salt rejection. Likewise, a MOF nanorod membrane with a high ratio of acid chain modification exhibited a 95% flux increase with maintained high salt rejection. For both the CNCs and the MOFs, these performance changes are attributed to new pathways within each membrane for water flow that exist due to the presence of the nanoparticles in each system. In combination, these results have allowed the study of transport of water molecules and various ion species in each membrane. Understanding these results will allow the development of smarter membrane materials to address present-day and future separations challenges.
- Published
- 2020
6. Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal new biological insights
- Author
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Baptista, Rodrigo P., primary, Li, Yiran, additional, Sateriale, Adam, additional, Sanders, Mandy J., additional, Brooks, Karen L., additional, Tracey, Alan, additional, Ansell, Brendan R. E., additional, Jex, Aaron R., additional, Cooper, Garrett W., additional, Smith, Ethan D., additional, Xiao, Rui, additional, Dumaine, Jennifer E., additional, Berriman, Matthew, additional, Striepen, Boris, additional, Cotton, James A., additional, and Kissinger, Jessica C., additional
- Published
- 2021
- Full Text
- View/download PDF
7. Mutant Huntingtin Is Cleared from the Brain via Active Mechanisms in Huntington Disease
- Author
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Caron, Nicholas S., primary, Banos, Raul, additional, Yanick, Christopher, additional, Aly, Amirah E., additional, Byrne, Lauren M., additional, Smith, Ethan D., additional, Xie, Yuanyun, additional, Smith, Stephen E.P., additional, Potluri, Nalini, additional, Findlay Black, Hailey, additional, Casal, Lorenzo, additional, Ko, Seunghyun, additional, Cheung, Daphne, additional, Kim, Hyeongju, additional, Seong, Ihn Sik, additional, Wild, Edward J., additional, Song, Ji-Joon, additional, Hayden, Michael R., additional, and Southwell, Amber L., additional
- Published
- 2020
- Full Text
- View/download PDF
8. PCN-222 Metal–Organic Framework Nanoparticles with Tunable Pore Size for Nanocomposite Reverse Osmosis Membranes
- Author
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Bonnett, Brittany L., primary, Smith, Ethan D., additional, De La Garza, Miranda, additional, Cai, Meng, additional, Haag, James V., additional, Serrano, Joel M., additional, Cornell, Hannah D., additional, Gibbons, Bradley, additional, Martin, Stephen M., additional, and Morris, Amanda J., additional
- Published
- 2020
- Full Text
- View/download PDF
9. Mitigation of bidirectional solute flux in forward osmosis via membrane surface coating of zwitterion functionalized carbon nanotubes
- Author
-
Zou, Shiqiang, Smith, Ethan D., Lin, Shihong, Martin, Stephen M., He, Zhen, Zou, Shiqiang, Smith, Ethan D., Lin, Shihong, Martin, Stephen M., and He, Zhen
- Abstract
Forward osmosis (FO) has emerged as a promising membrane technology to yield high-quality reusable water from various water sources. A key challenge to be solved is the bidirectional solute flux (BSF), including reverse solute flux (RSF) and forward solute flux (FSF). Herein, zwitterion functionalized carbon nanotubes (Z-CNTs) have been coated onto a commercial thin film composite (TFC) membrane, resulting in BSF mitigation via both electrostatic repulsion forces induced by zwitterionic functional groups and steric interactions with CNTs. At a coating density of 0.97 gm⁻², a significantly reduced specific RSF was observed for multiple draw solutes, including NaCl (55.5% reduction), NH₄H₂PO₄(83.8%), (NH₄)₂HPO₄ (74.5%), NH₄Cl (70.8%), and NH₄HCO₃ (61.9%). When a synthetic wastewater was applied as the feed to investigate membrane rejection, FSF was notably reduced by using the coated membrane with fewer pollutants leaked to the draw solution, including NH₄⁺-N (46.3% reduction), NO₂⁻₋N (37.0%), NO₂⁻₋N (30.3%), K⁺ (56.1%), PO₄³⁻₋P (100%), and Mg²⁺ (100%). When fed with real wastewater, a consistent water flux was achieved during semi-continuous operation with enhanced fouling resistance. This study is among the earliest efforts to address BSF control via membrane modification, and the results will encourage further exploration of effective strategies to reduce BSF.
- Published
- 2019
- Full Text
- View/download PDF
10. Functionalized Cellulose Nanocrystal Nanocomposite Membranes with Controlled Interfacial Transport for Improved Reverse Osmosis Performance
- Author
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Smith, Ethan D., Hendren, Keith D., Haag, James, Foster, Earl Johan, Martin, Stephen M., Smith, Ethan D., Hendren, Keith D., Haag, James, Foster, Earl Johan, and Martin, Stephen M.
- Abstract
Thin-film nanocomposite membranes (TFNs) are a recent class of materials that use nanoparticles to provide improvements over traditional thin-film composite (TFC) reverse osmosis membranes by addressing various design challenges, e.g., low flux for brackish water sources, biofouling, etc. In this study, TFNs were produced using as-received cellulose nanocrystals (CNCs) and 2,2,6,6-Tetramethylpiperidine-1-oxyl (TEMPO)-oxidized cellulose nanocrystals (TOCNs) as nanoparticle additives. Cellulose nanocrystals are broadly interesting due to their high aspect ratios, low cost, sustainability, and potential for surface modification. Two methods of membrane fabrication were used in order to study the effects of nanoparticle dispersion on membrane flux and salt rejection: a vacuum filtration method and a monomer dispersion method. In both cases, various quantities of CNCs and TOCNs were incorporated into a polyamide TFC membrane via in-situ interfacial polymerization. The flux and rejection performance of the resulting membranes was evaluated, and the membranes were characterized via attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR), transmission electron microscopy (TEM), and atomic force microscopy (AFM). The vacuum filtration method resulted in inconsistent TFN formation with poor nanocrystal dispersion in the polymer. In contrast, the dispersion method resulted in more consistent TFN formation with improvements in both water flux and salt rejection observed. The best improvement was obtained via the monomer dispersion method at 0.5 wt% TOCN loading resulting in a 260% increase in water flux and an increase in salt rejection to 98.98 ± 0.41% compared to 97.53 ± 0.31% for the plain polyamide membrane. The increased flux is attributed to the formation of nanochannels at the interface between the high aspect ratio nanocrystals and the polyamide matrix. These nanochannels serve as rapid transport pathways through the membrane, and c
- Published
- 2019
- Full Text
- View/download PDF
11. Mitigation of bidirectional solute flux in forward osmosis via membrane surface coating of zwitterion functionalized carbon nanotubes
- Author
-
Civil and Environmental Engineering, Chemical Engineering, Macromolecules Innovation Institute, Zou, Shiqiang, Smith, Ethan D., Lin, Shihong, Martin, Stephen M., He, Zhen, Civil and Environmental Engineering, Chemical Engineering, Macromolecules Innovation Institute, Zou, Shiqiang, Smith, Ethan D., Lin, Shihong, Martin, Stephen M., and He, Zhen
- Abstract
Forward osmosis (FO) has emerged as a promising membrane technology to yield high-quality reusable water from various water sources. A key challenge to be solved is the bidirectional solute flux (BSF), including reverse solute flux (RSF) and forward solute flux (FSF). Herein, zwitterion functionalized carbon nanotubes (Z-CNTs) have been coated onto a commercial thin film composite (TFC) membrane, resulting in BSF mitigation via both electrostatic repulsion forces induced by zwitterionic functional groups and steric interactions with CNTs. At a coating density of 0.97 gm⁻², a significantly reduced specific RSF was observed for multiple draw solutes, including NaCl (55.5% reduction), NH₄H₂PO₄(83.8%), (NH₄)₂HPO₄ (74.5%), NH₄Cl (70.8%), and NH₄HCO₃ (61.9%). When a synthetic wastewater was applied as the feed to investigate membrane rejection, FSF was notably reduced by using the coated membrane with fewer pollutants leaked to the draw solution, including NH₄⁺-N (46.3% reduction), NO₂⁻₋N (37.0%), NO₂⁻₋N (30.3%), K⁺ (56.1%), PO₄³⁻₋P (100%), and Mg²⁺ (100%). When fed with real wastewater, a consistent water flux was achieved during semi-continuous operation with enhanced fouling resistance. This study is among the earliest efforts to address BSF control via membrane modification, and the results will encourage further exploration of effective strategies to reduce BSF.
- Published
- 2019
12. Functionalized Cellulose Nanocrystal Nanocomposite Membranes with Controlled Interfacial Transport for Improved Reverse Osmosis Performance
- Author
-
Chemical Engineering, Macromolecules Innovation Institute, Materials Science and Engineering, Smith, Ethan D., Hendren, Keith D., Haag, James, Foster, Earl Johan, Martin, Stephen M., Chemical Engineering, Macromolecules Innovation Institute, Materials Science and Engineering, Smith, Ethan D., Hendren, Keith D., Haag, James, Foster, Earl Johan, and Martin, Stephen M.
- Abstract
Thin-film nanocomposite membranes (TFNs) are a recent class of materials that use nanoparticles to provide improvements over traditional thin-film composite (TFC) reverse osmosis membranes by addressing various design challenges, e.g., low flux for brackish water sources, biofouling, etc. In this study, TFNs were produced using as-received cellulose nanocrystals (CNCs) and 2,2,6,6-Tetramethylpiperidine-1-oxyl (TEMPO)-oxidized cellulose nanocrystals (TOCNs) as nanoparticle additives. Cellulose nanocrystals are broadly interesting due to their high aspect ratios, low cost, sustainability, and potential for surface modification. Two methods of membrane fabrication were used in order to study the effects of nanoparticle dispersion on membrane flux and salt rejection: a vacuum filtration method and a monomer dispersion method. In both cases, various quantities of CNCs and TOCNs were incorporated into a polyamide TFC membrane via in-situ interfacial polymerization. The flux and rejection performance of the resulting membranes was evaluated, and the membranes were characterized via attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR), transmission electron microscopy (TEM), and atomic force microscopy (AFM). The vacuum filtration method resulted in inconsistent TFN formation with poor nanocrystal dispersion in the polymer. In contrast, the dispersion method resulted in more consistent TFN formation with improvements in both water flux and salt rejection observed. The best improvement was obtained via the monomer dispersion method at 0.5 wt% TOCN loading resulting in a 260% increase in water flux and an increase in salt rejection to 98.98 ± 0.41% compared to 97.53 ± 0.31% for the plain polyamide membrane. The increased flux is attributed to the formation of nanochannels at the interface between the high aspect ratio nanocrystals and the polyamide matrix. These nanochannels serve as rapid transport pathways through the membrane, and c
- Published
- 2019
13. Zooming in on adverse birth outcomes in coalfield regions of Central Appalachia
- Author
-
Marston, Michael L., Wu, Connor Y. H., Smith, Ethan D., Gohlke, Julia M., Kolivras, Korine N., Krometis, Leigh-Anne H., and Powell River Project
- Abstract
Health disparities account for significant differences in mortality and morbidity risks in Central Appalachia (encompassing parts of WV, KY, TN and VA) compared to other U.S. regions, yet research addressing environmental factors potentially contributing to these health disparities is lacking. Central Appalachia offers a unique opportunity to examine environmental exposures associated with resource extraction. Coal production from large surface mines was the dominant resource extraction method in the 1990s-2000s and is now decreasing as other resource extraction methods increase. We hypothesize that health risks associated with air and water pollution exposure are greater for Central Appalachian residents living within close proximity to active surface mines. The results described here begins to link exposure with health outcomes using individual-level birth record data. We have extended spatiotemporal characterization of boundaries associated with surface mining between 1990 and 2015 in all Central Appalachia counties. Results indicate that from 1990 to 2015, 1806 km2 of land across the study area was disturbed by mining activities, which equates to approximately 4.2% of the study-defined Central Appalachia region. Temporal trends show a decreasing amount of active surface mining sites over the study period. Using a previously developed surface mining dataset that only covered southwest Virginia coalfields, we tested the hypothesis that maternal address proximity to active surface mining was positively associated with preterm birth. No significant association was found; however the sample size (n=5008) was very small due to poor geocoding rates, particularly in earlier years, and overall low number of births between 1990-2015 in this small, rural area (n=14,269). Our next steps will be to improve inference and precision in effect estimates by increasing sample size with inclusion of data from TN, KY and WV, application of the accuracy–assessed surface mining extent dataset described here to improve estimate of proximity to active surface mining, and inclusion of watershed boundaries, drinking water violation datasets, as well as airshed characterization. Ultimately, we hope this research will aid in determining the underpinnings of health disparities in Central Appalachian communities, ultimately leading to research, policy and practice improvements that may be generalizable to other rural areas beyond Central Appalachia.
- Published
- 2018
14. Mitigation of bidirectional solute flux in forward osmosis via membrane surface coating of zwitterion functionalized carbon nanotubes
- Author
-
Zou, Shiqiang, primary, Smith, Ethan D., additional, Lin, Shihong, additional, Martin, Stephen M., additional, and He, Zhen, additional
- Published
- 2019
- Full Text
- View/download PDF
15. Zooming in on adverse birth outcomes in coalfield regions of Central Appalachia
- Author
-
Powell River Project, Marston, Michael L., Wu, Connor Y. H., Smith, Ethan D., Gohlke, Julia M., Kolivras, Korine N., Krometis, Leigh-Anne H., Powell River Project, Marston, Michael L., Wu, Connor Y. H., Smith, Ethan D., Gohlke, Julia M., Kolivras, Korine N., and Krometis, Leigh-Anne H.
- Abstract
Health disparities account for significant differences in mortality and morbidity risks in Central Appalachia (encompassing parts of WV, KY, TN and VA) compared to other U.S. regions, yet research addressing environmental factors potentially contributing to these health disparities is lacking. Central Appalachia offers a unique opportunity to examine environmental exposures associated with resource extraction. Coal production from large surface mines was the dominant resource extraction method in the 1990s-2000s and is now decreasing as other resource extraction methods increase. We hypothesize that health risks associated with air and water pollution exposure are greater for Central Appalachian residents living within close proximity to active surface mines. The results described here begins to link exposure with health outcomes using individual-level birth record data. We have extended spatiotemporal characterization of boundaries associated with surface mining between 1990 and 2015 in all Central Appalachia counties. Results indicate that from 1990 to 2015, 1806 km2 of land across the study area was disturbed by mining activities, which equates to approximately 4.2% of the study-defined Central Appalachia region. Temporal trends show a decreasing amount of active surface mining sites over the study period. Using a previously developed surface mining dataset that only covered southwest Virginia coalfields, we tested the hypothesis that maternal address proximity to active surface mining was positively associated with preterm birth. No significant association was found; however the sample size (n=5008) was very small due to poor geocoding rates, particularly in earlier years, and overall low number of births between 1990-2015 in this small, rural area (n=14,269). Our next steps will be to improve inference and precision in effect estimates by increasing sample size with inclusion of data from TN, KY and WV, application of the accuracy–assessed surface mining extent
- Published
- 2018
16. Mutant Huntingtin Is Cleared from the Brain via Active Mechanisms in Huntington Disease.
- Author
-
Caron, Nicholas S., Banos, Raul, Yanick, Christopher, Aly, Amirah E., Byrne, Lauren M., Smith, Ethan D., Yuanyun Xie, Smith, Stephen E. P., Potluri, Nalini, Black, Hailey Findlay, Casal, Lorenzo, Seunghyun Ko, Daphne Cheung, Hyeongju Kim, Ihn Sik Seong, Wild, Edward J., Ji-Joon Song, Hayden, Michael R., and Southwell, Amber L.
- Subjects
HUNTINGTON disease ,SPINOCEREBELLAR ataxia ,TRINUCLEOTIDE repeats ,BRAIN ,EXTRACELLULAR space ,NEURODEGENERATION - Abstract
Huntington disease (HD) is a neurodegenerative disease caused by a CAG trinucleotide repeat expansion in the huntingtin (HTT) gene. Therapeutics that lower HTT have shown preclinical promise and are being evaluated in clinical trials. However, clinical assessment of brain HTT lowering presents challenges. We have reported that mutant HTT (mHTT) in the CSF of HD patients correlates with clinical measures, including disease burden as well as motor and cognitive performance. We have also shown that lowering HTT in the brains of HD mice results in correlative reduction of mHTT in the CSF, prompting the use of this measure as an exploratory marker of target engagement in clinical trials. In this study, we investigate the mechanisms of mHTT clearance from the brain in adult mice of both sexes to elucidate the significance of therapy-induced CSF mHTT changes. We demonstrate that, although neurodegeneration increases CSF mHTT concentrations, mHTT is also present in the CSF of mice in the absence of neurodegeneration. Importantly, we show that secretion of mHTT from cells in the CNS followed by glymphatic clearance from the extracellular space contributes to mHTT in the CSF. Furthermore, we observe secretion of wild type HTT from healthy control neurons, suggesting that HTT secretion is a normal process occurring in the absence of pathogenesis. Overall, our data support both passive release and active clearance of mHTT into CSF, suggesting that its treatment-induced changes may represent a combination of target engagement and preservation of neurons. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
17. The Praise of Glory: Apophatic Theology as Transformational Mysticism
- Author
-
Smith, Ethan D.
- Subjects
- Theology, Philosophy, Dionysius the Areopagite, apophatic theology, negative theology, Ludwig Wittgenstein, Jewish mysticism
- Abstract
Patristic apophatic theologies were typically written as commentaries on the church’s liturgy and/or as guides to the ascetic struggle for holiness. As such, apophatic theology was Christocentric, Scriptural, liturgical, and experientially mystical. Modern negative theology, by contrast, is often written as philosophical reflections on the limits of language and/or thought. It begins with the doctrine of creation, instead of Christology, and proceeds inferentially, rather than experientially, to determine that language and/or thought necessarily cannot comprehend the Creator. I argue two things about this kind of modern negative theology. First, I use the philosophical logic of Ludwig Wittgenstein to argue that the very idea of showing the transcendence of God by means of a demonstration of the limits of language or thought is fundamentally confused. Second, by contextualizing Patristic apophatic theology with ancient Jewish merkava mysticism I argue that modern negative theology functions as a way for theologians to look away from the revelation of divine transcendence in Christ as the crucified Lord of Glory
- Published
- 2017
18. Hyperacetylation mimetics within the tau filament core inhibits prion-like propagation of misfolded tau.
- Author
-
Smith ED, McKenna R, Mietzsch M, Borchelt DR, Prokop S, and Chakrabarty P
- Abstract
Acetylation of key Lysine residues characterizes aggregates of the microtubule-associated protein tau constituting the neuropathological hallmark of many neurodegenerative diseases, such as Alzheimer's disease (AD) and Progressive Supranuclear Palsy (PSP). This has led to the idea that acetylation influences tau aggregation. Using a HEK293 cell-based aggregation assay, we tested whether acetylation-mimicking substitutions (K→Q) on five AD-associated acetyl-modified sites (AcK-311, 353, 369, 370, 375) influenced its propensity to aggregate when exposed to tau seeds derived from two clinically distinctive diseases - AD and PSP. In combination, the presence of 5K→Q sites ablated tau aggregation induced by seeds from both AD and PSP patients, indicating that acetylation within the filament core domain of tau could have an inhibitory effect on seed-mediated aggregation. We had previously identified that a phosphorylation-mimetic on Ser305 (S→E) abrogated tau aggregation by seeds from AD patients, without affecting seeding by PSP patients. Combining the S305→E to the 5K→Q acetyl-modified sites, we found that this tau could now be seeded only by PSP patients, but not by AD patients, confirming Ser305 as a critical determinant of strain-specific tau seeding. On the other hand, acetylation-nullifying substitutions (K→R or K→A) on these same Lys sites did not alter tau seeding abilities compared to the parental tau construct. Notably, the combined acetylation-nullifying Alanine substitutions on these 5 Lys sites resulted in spontaneous self-aggregation, with the filaments resembling amorphous deposits. All together, we demonstrate that cooperative acetyl-occupancy in the tau filament core influences seeded propagation of misfolded tau as well as drives self-aggregation., Competing Interests: Conflict of interest. The authors declare that they have no competing interests.
- Published
- 2024
- Full Text
- View/download PDF
19. Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions.
- Author
-
Baptista RP, Li Y, Sateriale A, Sanders MJ, Brooks KL, Tracey A, Ansell BRE, Jex AR, Cooper GW, Smith ED, Xiao R, Dumaine JE, Georgeson P, Pope BJ, Berriman M, Striepen B, Cotton JA, and Kissinger JC
- Subjects
- DNA Copy Number Variations, Genome, Humans, Telomere genetics, Cryptosporidiosis genetics, Cryptosporidium genetics
- Abstract
Cryptosporidiosis is a leading cause of waterborne diarrheal disease globally and an important contributor to mortality in infants and the immunosuppressed. Despite its importance, the Cryptosporidium community has only had access to a good, but incomplete, Cryptosporidium parvum IOWA reference genome sequence. Incomplete reference sequences hamper annotation, experimental design, and interpretation. We have generated a new C. parvum IOWA genome assembly supported by Pacific Biosciences (PacBio) and Oxford Nanopore long-read technologies and a new comparative and consistent genome annotation for three closely related species: C. parvum , Cryptosporidium hominis , and Cryptosporidium tyzzeri We made 1926 C. parvum annotation updates based on experimental evidence. They include new transporters, ncRNAs, introns, and altered gene structures. The new assembly and annotation revealed a complete Dnmt2 methylase ortholog. Comparative annotation between C. parvum , C. hominis , and C. tyzzeri revealed that most "missing" orthologs are found, suggesting that the biological differences between the species must result from gene copy number variation, differences in gene regulation, and single-nucleotide variants (SNVs). Using the new assembly and annotation as reference, 190 genes are identified as evolving under positive selection, including many not detected previously. The new C. parvum IOWA reference genome assembly is larger, gap free, and lacks ambiguous bases. This chromosomal assembly recovers all 16 chromosome ends, 13 of which are contiguously assembled. The three remaining chromosome ends are provisionally placed. These ends represent duplication of entire chromosome ends including subtelomeric regions revealing a new level of genome plasticity that will both inform and impact future research., (© 2022 Baptista et al.; Published by Cold Spring Harbor Laboratory Press.)
- Published
- 2022
- Full Text
- View/download PDF
20. Functionalized Cellulose Nanocrystal Nanocomposite Membranes with Controlled Interfacial Transport for Improved Reverse Osmosis Performance.
- Author
-
Smith ED, Hendren KD, Haag JV 4th, Foster EJ, and Martin SM
- Abstract
Thin-film nanocomposite membranes (TFNs) are a recent class of materials that use nanoparticles to provide improvements over traditional thin-film composite (TFC) reverse osmosis membranes by addressing various design challenges, e.g., low flux for brackish water sources, biofouling, etc. In this study, TFNs were produced using as-received cellulose nanocrystals (CNCs) and 2,2,6,6-Tetramethylpiperidine-1-oxyl (TEMPO)-oxidized cellulose nanocrystals (TOCNs) as nanoparticle additives. Cellulose nanocrystals are broadly interesting due to their high aspect ratios, low cost, sustainability, and potential for surface modification. Two methods of membrane fabrication were used in order to study the effects of nanoparticle dispersion on membrane flux and salt rejection: a vacuum filtration method and a monomer dispersion method. In both cases, various quantities of CNCs and TOCNs were incorporated into a polyamide TFC membrane via in-situ interfacial polymerization. The flux and rejection performance of the resulting membranes was evaluated, and the membranes were characterized via attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR), transmission electron microscopy (TEM), and atomic force microscopy (AFM). The vacuum filtration method resulted in inconsistent TFN formation with poor nanocrystal dispersion in the polymer. In contrast, the dispersion method resulted in more consistent TFN formation with improvements in both water flux and salt rejection observed. The best improvement was obtained via the monomer dispersion method at 0.5 wt% TOCN loading resulting in a 260% increase in water flux and an increase in salt rejection to 98.98 ± 0.41% compared to 97.53 ± 0.31% for the plain polyamide membrane. The increased flux is attributed to the formation of nanochannels at the interface between the high aspect ratio nanocrystals and the polyamide matrix. These nanochannels serve as rapid transport pathways through the membrane, and can be used to tune selectivity via control of particle/polymer interactions.
- Published
- 2019
- Full Text
- View/download PDF
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