96 results on '"Sirajudheen Anwar"'
Search Results
2. Unlocking the biochemical and computational parameters of Ceropegia foetida: A scientific approach for functional bioactive compounds from a medicinal food plant
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Fawaz Alheibshy, Abdulwahab Alamri, Saad Saeed Saad Alshahrani, Ahmed Awadh Saleh Alamri, Nasser A.Awadh Ali, Abdulwali Al-Khulaidi, Arshad Hussain, and Sirajudheen Anwar
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Ceropegia foetida ,Antioxidant ,Enzyme inhibition ,Secondary metabolites ,Docking ,MD simulations ,Botany ,QK1-989 - Abstract
Investigating the therapeutic potentials of medicinal plants remains pivotal in the discovery of novel bioactive compounds for food and pharmaceutical applications. This research delves into the phytochemical composition and biological activities of Ceropegia foetida's methanol extract, employing comprehensive UHPLC-MS for secondary metabolites profiling. The study quantifies the extract's substantial phenolic (76.12 mg GAE/g) and flavonoid (21.58 mg QE/g) contents, revealing a promising correlation with robust antioxidant activities, as evidenced by notable ABTS, FRAP, and CUPRAC assay outcomes. Furthermore, the extract demonstrates significant inhibitory effects on key enzymes implicated in neurodegenerative disorders and diabetes, including acetylcholinesterase (3.56 mg GALAE/g), butyrylcholinesterase (2.91 mg GALAE/g), and tyrosinase (128.31 mg KAE/g). UHPLC-MS analysis confirms the presence of 39 distinct phytochemicals across six primary categories, affirming the extract's complex bioactive profile. In complement to experimental assays, computational analyses via molecular docking simulations provided insights into the interaction mechanisms of identified phytochemicals with the target enzymes. These simulations revealed a substantial binding affinity of the plant's constituents towards enzymes compared to standard inhibitors, highlighting the compounds responsible for C. foetida's bioactivity. Such computational insights, alongside empirical data, suggest that C. foetida merits further exploration as a natural source of therapeutic agents. Overall, the efficacious enzyme inhibition, coupled with the identified phytochemical diversity, underscores the potential of C. foetida as a valuable natural resource for developing nutraceuticals and therapeutic agents. These findings support the further investigation of C. foetida for its applicability in enhancing health and treating chronic conditions.
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- 2024
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3. Deciphering quinazoline derivatives’ interactions with EGFR: a computational quest for advanced cancer therapy through 3D-QSAR, virtual screening, and MD simulations
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Sirajudheen Anwar, Jowaher Alanazi, Nafees Ahemad, Shafaq Raza, Tahir Ali Chohan, and Hammad Saleem
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EGFR ,anti-cancer ,virtual screening ,simulations ,3D-QSAR ,in-silico ,Therapeutics. Pharmacology ,RM1-950 - Abstract
IntroductionThe epidermal growth factor receptor (EGFR) presents a crucial target for combatting cancer mortality.MethodsThis study employs a suite of computational techniques, including 3D-QSAR, ligand-based virtual screening, molecular docking, fingerprinting analysis, ADME, and DFT-based analyses (MESP, HOMO, LUMO), supplemented by molecular dynamics simulations and MMGB/PBSA free energy calculations, to explore the binding dynamics of quinazoline derivatives with EGFR. With strong q2 and r2 values from CoMFA and CoMSIA models, our 3D- QSAR models reliably predict EGFR inhibitors’ efficacy.Results and DiscussionUtilizing a potent model compound as a reference, an E-pharmacophore model was developed to sift through the eMolecules database, identifying 19 virtual screening hits based on ShapeTanimoto, ColourTanimoto, and TanimotoCombo scores. These hits, assessed via 3D- QSAR, showed pIC50 predictions consistent with experimental data. Our analyses elucidate key features essential for EGFR inhibition, reinforced by ADME studies that reveal favorable pharmacokinetic profiles for most compounds. Among the primary phytochemicals examined, potential EGFR inhibitors were identified. Detailed MD simulation analyses on three select ligands—1Q1, 2Q17, and VS1—demonstrated their stability and consistent interaction over 200 ns, with MM/GBSA values corroborating their docking scores and highlighting 1Q1 and VS1’s superior EGFR1 affinity. These results position VS1 as an especially promising lead in EGFR1 inhibitor development, contributing valuable insights towards crafting novel, effective EGFR1 inhibitors.
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- 2024
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4. Health-related quality of life among people with diabetes: A cross-sectional study in Hail region, Saudi Arabia
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Farhan Alshammari, Mukhtar Ansari, Kashif Ullah Khan, Dinesh Neupane, Arshad Hussain, Sirajudheen Anwar, Bushra Alshammari, Awatif Alrasheeday, Shazia Jamshed, Binaya Sapkota, and Abdur Rasheed
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Medicine ,Science - Published
- 2024
5. Synthesis, Molecular Docking, and Dynamic Simulation Targeting Main Protease (Mpro) of New, Thiazole Clubbed Pyridine Scaffolds as Potential COVID-19 Inhibitors
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Adel Alghamdi, Amr S. Abouzied, Abdulwahab Alamri, Sirajudheen Anwar, Mukhtar Ansari, Ibrahim Khadra, Yasser H. Zaki, and Sobhi M. Gomha
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hydrazonoyl chlorides ,acetyl pyridines ,thiazoles ,molecular docking ,schiff bases ,COVID-19 ,Biology (General) ,QH301-705.5 - Abstract
Many biological activities of pyridine and thiazole derivatives have been reported, including antiviral activity and, more recently, as COVID-19 inhibitors. Thus, in this paper, we designed, synthesized, and characterized a novel series of N-aminothiazole-hydrazineethyl-pyridines, beginning with a N′-(1-(pyridine-3-yl)ethylidene)hydrazinecarbothiohydrazide derivative and various hydrazonoyl chlorides and phenacyl bromides. Their Schiff bases were prepared from the condensation of N-aminothiazole derivatives with 4-methoxybenzaldehyde. FTIR, MS, NMR, and elemental studies were used to identify new products. The binding energy for non-bonding interactions between the ligand (studied compounds) and receptor was determined using molecular docking against the SARS-CoV-2 main protease (PDB code: 6LU7). Finally, the best docked pose with highest binding energy (8a = −8.6 kcal/mol) was selected for further molecular dynamics (MD) simulation studies to verify the outcomes and comprehend the thermodynamic properties of the binding. Through additional in vitro and in vivo research on the newly synthesized chemicals, it is envisaged that the achieved results will represent a significant advancement in the fight against COVID-19.
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- 2023
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6. Drug Repurposing: A New Hope in Drug Discovery for Prostate Cancer
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Jonaid Ahmad Malik, Sakeel Ahmed, Sadiya Sikandar Momin, Sijal Shaikh, Ahmed Alafnan, Jowaher Alanazi, Mohammad Hajaj Said Almermesh, and Sirajudheen Anwar
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Chemistry ,QD1-999 - Published
- 2022
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7. Charting the Knowledge and Patterns of Non-Steroidal Anti-Inflammatory Drugs Usage in Hail Population, Saudi Arabia: Insights into the Adverse Effect Profile
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Abdullah T. Altahini, Waled Aburas, Saud F. Aljarwan, Suliman A. Alsuwayagh, Naif F. Alqahtani, Saleh Alquwaiay, and Sirajudheen Anwar
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KAP ,NSAIDS ,pain treatment ,musculoskeletal pain ,complications ,Pharmacy and materia medica ,RS1-441 - Abstract
(1) Background: It is crucial to provide safe and knowledgeable healthcare practices because no research has been performed on the knowledge and usage patterns of NSAIDs among the Hail population. (2) Method: Structured questionnaires were utilized to gather data from 399 individuals in Hail, Saudi Arabia, for the cross-sectional analysis. The study assessed participants’ knowledge regarding NSAIDs, patterns of use, reasons for use, and awareness of potential side effects. (3) Results: In the study, the gender distribution indicated that 170 participants (42.61%) were male, whereas 229 (57.39%) were female. Gender, occupation, and marital status showed non-significant associations except for menstrual cycle and joint pain, where marital status displayed significant associations (p > 0.001). Education and monthly income exhibited non-significant associations for all these reasons. The regression analysis demonstrated that gender played a significant role, with females having higher odds of knowledge (AOR = 1.75, 95% CI 1.10–2.88) than males. Meanwhile, >50% of the participants had knowledge of adverse events related to the use of NSAIDs, whereas 25% had no knowledge. Moreover, 59 (25.76%) participants reported discomfort with the use of NSAIDs. In addition, 50% and >75% of respondents believed that NSAIDs could induce peptic ulcers and kidney damage, respectively. (4) Conclusions: This study shed light on the knowledge and patterns of NSAIDs use in the population of Hail, Saudi Arabia. Healthcare providers and policymakers should consider these insights to develop targeted educational initiatives and healthcare interventions to promote safe and informed NSAID utilization in the region.
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- 2024
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8. Association of SARS-CoV‑2 and Polypharmacy with Gut–Lung Axis: From Pathogenesis to Treatment
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Jonaid Ahmad Malik, Sakeel Ahmed, Zahid Yaseen, Muteb Alanazi, Tareq Nafea Alharby, Hisham Abdulaziz Alshammari, and Sirajudheen Anwar
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Chemistry ,QD1-999 - Published
- 2022
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9. SARS-CoV-2 vaccines: Clinical endpoints and psychological perspectives: A literature review
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Jonaid Ahmad Malik, Mir Aroosa, Sakeel Ahmed, Mrunal Shinde, Saleh Alghamdi, Khaled Almansour, Turki Al Hagbani, Muteb Sultan Alanazi, and Sirajudheen Anwar
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SARS-CoV-2 ,Vaccine efficacy ,Psychological effect ,Clinical endpoints ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: About 270 million cases have been confirmed, and 5.3 million fatalities Worldwide due to SARS-CoV-2. Several vaccine candidates have entered phase 3 of the clinical trial and are being investigated to provide immunity to the maximum percentage of people. A safe and effective vaccine is required to tackle the current COVID-19 waves. There have been reports that clinical endpoints and psychological parameters are necessary to consider vaccine efficacy. This review examines the clinical endpoints required for a successful SARS-CoV-2 vaccine and the influences of psychological parameters on its efficacy. Methods: The main research question was to find out the clinical endpoints that determine the vaccine efficacy? And what kind of psychological parameters affect the vaccine efficacy? The information was taken from several journals, databases, and scientific search engines like Googe scholar, Pubmed, Scopus, Web of Science, Science direct, WHO website, and other various sites. The research studies were searched using keywords; SAR-CoV-2 vaccine efficacy, psychological effect on SARS-CoV-2 vaccine, SARS-CoV-2 vaccine endpoints. Results: This review has highlighted various clinical endpoints that are the main determinants of clinical vaccine efficacy. Currently, vaccinations are being carried out throughout the world; it is important to investigate the main determinants affecting vaccine efficacy. We have focused on the clinical endpoints and the influence of psychological parameters that affect the vaccine efficacy in clinical settings. The primary endpoints include the risk of infection, symptoms, and severity of COVID-19, while hospitalization length, supplemental oxygen requirement, and mechanical ventilation are secondary endpoints in the clinical endpoints. Some tangential endpoints were also considered, including organ dysfunction, stroke, and MI. Many psychological associated things have influenced the vaccine efficacy, like the lower antibody titers in the vaccinated people. In addition to that, Short- and long-term stress and sleep deprivation were also found to affect the vaccine efficacy. Conclusion: The review summarizes the important clinical endpoints required for a successful vaccine candidate. In addition to primary and secondary endpoints, auxiliary endpoints and the disease burden also play an important role in modulating vaccine efficacy. Moreover, the psychological perspective also influences vaccine efficacy. Effective follow-up of participants should follow to examine the clinical endpoints to reach any conclusion about vaccine efficacy.
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- 2022
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10. Assessment of Health-Related Quality of Life in Chronic Kidney Disease Patients: A Hospital-Based Cross-Sectional Study
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Shivam Sharma, Darpan Kalra, Ishfaq Rashid, Sudhir Mehta, Manish Kumar Maity, Khushi Wazir, Sumeet Gupta, Siddique Akber Ansari, Obaid S. Alruqi, Roohi Khan, Imran Khan, and Sirajudheen Anwar
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chronic kidney disease ,health-related quality of life ,KDQoL ,Medicine (General) ,R5-920 - Abstract
Background: Health-related quality of life is rapidly becoming recognized as an important indicator of how a disease affects patient lives and for evaluating the quality of care, especially for chronic conditions such as chronic kidney disease (CKD). Objectives: This study is an attempt to assess the quality of life in patients with chronic kidney disease at MMIMSR and also identify characteristics that may be associated with their worsening quality of life. Materials and Methods: This cross-sectional investigation was conducted at the in-patient department (IPD) of the MMIMSR hospital. This study included 105 CKD patients and used a systematic random sampling method for quantitative analysis. This study utilized a 36-item short-form SF-36 (v1.3) questionnaire to assess HRQoL in CKD patients. Descriptive statistics were employed at the baseline. Chi square and ANOVA were used to draw comparisons between two groups or more than two groups, respectively. Logistic regression analysis was utilized to identify the potential QoL determinants. A p value of 0.05 or lower was used to determine statistical significance. Results: Among a total of 105 participants, the mean (±standard deviation) age was found to be 54.53 ± 13.47 years; 48 were male patients, and 57 were female patients. Diabetes Mellitus (61.9%), hypertension (56.2%), chronic glomerulonephritis (7.6%), chronic pyelonephritis (6.7%), and polycystic kidney disease (5.7%) were identified to be the most frequent disorders associated with CKD. The current study also demonstrated that the HRQoL score domains such as symptom problem list, the effect of kidney disease, and the burden of kidney disease decline significantly and progressively as the patient advances into higher stages of CKD (p = 0.005). A similar pattern was observed in work status, sleep, and general health (p < 0.005). Additionally, a statistically significant difference was noted for cognitive function, quality of social interaction, overall health, dialysis staff encouragement, patient satisfaction, social support, physical functioning, role of physical health, pain, emotional well-being, role of emotional health, social functioning, and energy fatigue (p < 0.005). The mean difference for PCS and MCS based on CKD stages was found to be statistically significant (p < 0.005). The PCS and MCS showed a positive correlation with GFR (r = 0.521), and Hb (r = 0.378), GFR (r = 0.836), and Hb (r = 0.488), respectively. Conclusions: The findings of this study demonstrated that a significant decrease in HRQoL was observed among CKD patients, with a progressive deterioration of HRQoL dimensions as the patient advances to end-stage renal disease. This study also revealed that CKD imposes various restrictions on patients’ day-to-day lives, particularly in terms of their physical and mental functioning, even in the initial stages of the disease.
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- 2023
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11. Clinical Characteristics and Treatment Outcomes of Mild to Moderate COVID-19 Patients at Tertiary Care Hospital, Al Baha, Saudi Arabia: A Single Centre Study
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Mohammad Albanghali, Saleh Alghamdi, Mohammed Alzahrani, Bassant Barakat, Abdul Haseeb, Jonaid Ahmad Malik, Sakeel Ahmed, and Sirajudheen Anwar
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COVID-19 ,Mild infection ,Hydroxychloroquine ,Antibiotics ,Saudi Arabia ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Objective: Since the severity of symptoms affects the treatment option for Coronavirus Disease 2019 (COVID-19) patients, the treatment pattern for mild to moderate non-ICU cases must be evaluated, particularly in the current scenario of mutation and variant strain for effective decision making. Methods: The objective of retrospective analysis was to assess clinical and treatment outcomes in mild to moderate symptoms in non-ICU patients with COVID-19 who were admitted to major tertiary care hospitals in Al Baha, Saudi Arabia, between April and August 2020. Results: A total of 811 people were admitted for COVID-19 treatment, age ranging from 14 to 66, diabetes mellitus (31%, n = 248) and hypertension (24%, n = 198) were the most common comorbid conditions. The hydroxychloroquine (HCQ) treated group (G1 n = 466) had an MD of 8 and an IQR of 5–13 for time in hospital with a 4.3% mortality rate, while the non-HCQ group (G2 n = 345) had an MD of 6 and an IQR of 3–11 for time in hospital with a 3.2% mortality rate. A combination of antiviral and antibiotic treatment was found to be effective, other most frequent intervention was analgesics 85.7%, anticoagulant 75%, minerals (Zinc 83% and Vit D3 82%). Conclusions: The therapy and clinical outcomes from the past will be the guiding factor to treat the COVID variants infection in the future. Patients treated with HCQ had a higher mortality rate, whereas those who were given a non-HCQ combination had a greater clinical outcome profile. Data Availability: Data available on request due to ethical restrictions. The anonymized data presented in this study are available on request from the corresponding author. The data are not publicly available to maintain privacy and adhere to guidelines of the ethics protocol.
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- 2022
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12. The SARS-CoV-2 mutations versus vaccine effectiveness: New opportunities to new challenges
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Jonaid Ahmad Malik, Sakeel Ahmed, Aroosa Mir, Mrunal Shinde, Onur Bender, Farhan Alshammari, Mukhtar Ansari, and Sirajudheen Anwar
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Covid-19 ,Mutations ,Variant strains ,Vaccine efficacy ,Clinical trials ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: The SARS-CoV-2 coronavirus epidemic is hastening the discovery of the most efficient vaccines. The development of cost-effective vaccines seems to be the only solution to terminate this pandemic. However, the vaccines’ effectiveness has been questioned due to recurrent mutations in the SARS-CoV-2 genome. Most of the mutations are associated with the spike protein, a vital target for several marketed vaccines. Many countries were highly affected by the 2nd wave of the SARS-CoV-2, like the UK, India, Brazil and France. Experts are also alarming the further COVID-19 wave with the emergence of Omicron, which is highly affecting the South African populations. This review encompasses the detailed description of all vaccine candidates and COVID-19 mutants that will add value to design further studies to combat the COVID-19 pandemic. Methods: The information was generated using various search engines like google scholar, PubMed, clinicaltrial.gov.in, WHO database, ScienceDirect, and news portals by using keywords SARS-CoV-2 mutants, COVID-19 vaccines, efficacy of SARS-CoV-2 vaccines, COVID-19 waves. Results: This review has highlighted the evolution of SARS-CoV-2 variants and the vaccine efficacy. Currently, various vaccine candidates are undergoing several phases of development. Their efficacy still needs to check for newly emerged variants. We have focused on the evolution, multiple mutants, waves of the SARS-CoV-2, and different marketed vaccines undergoing various clinical trials and the design of the trials to determine vaccine efficacy. Conclusion: Various mutants of SARS-CoV-2 arrived, mainly concerned with the spike protein, a key component to design the vaccine candidates. Various vaccines are undergoing clinical trial and show impressive results, but their efficacy still needs to be checked in different SARS-CoV-2 mutants. We discussed all mutants of SARS-CoV-2 and the vaccine’s efficacy against them. The safety concern of these vaccines is also discussed. It is important to understand how coronavirus gets mutated to design better new vaccines, providing long-term protection and neutralizing broad mutant variants. A proper study approach also needs to be considered while designing the vaccine efficacy trials, which further improved the study outcomes. Taking preventive measures to protect from the virus is also equally important, like vaccine development.
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- 2022
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13. Editorial: Targeting tumor EMT-related signaling by natural products
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Sirajudheen Anwar, Nafees Ahmed, and Letizia Giampietro
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natural products ,epithelial-mesenchymal transition (EMT) ,targeting tumor ,treatment of cancer ,EMT inhibitors ,Therapeutics. Pharmacology ,RM1-950 - Published
- 2023
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14. An overview of SARS-COV-2 epidemiology, mutant variants, vaccines, and management strategies
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Tahmeena Farooqi, Jonaid Ahmad Malik, Almas Hanif Mulla, Turki Al Hagbani, Khaled Almansour, Mohammed Abrar Ubaid, Saleh Alghamdi, and Sirajudheen Anwar
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SARS-COV-2 ,Epidemiology ,Variant strains ,Vaccine candidates ,WHO landscape ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: Over the last two decades, humanity has observed the extraordinary anomaly caused by novel, weird coronavirus strains, such as severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS). As the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) virus has made its entry into the world, it has dramatically affected life in every domain by continuously producing new variants. The vaccine development is an ongoing process, although some vaccines got marketed. The big challenge is now whether the vaccine candidates can provide long-lasting protection or prevention against mutant variants. Methods: The information was gathered from various journals, electronic searches via Internet-based information such as PubMed, Google Scholar, Science Direct, online electronic journals, WHO landscape, world meters, WHO website, and News. Results: This review will present and discuss some coronavirus disease 19 (COVID-19) related aspects including: the pathophysiology, epidemiology, mutant variants vaccine candidates, vaccine efficacy, and management strategies. Due to the high death rate, continuous spread, an inadequate workforce, lack of required therapeutics, and incomplete understanding of the viral strain, it becomes crucial to build the knowledge of its biological characteristics and make available the rapid diagnostic and vital therapeutic machinery for the combat and management of an infection. Conclusion: The data summarizes current research on the COVID 19 infection and therapeutic interventions, which will direct future decision-making on the effort-worthy phases of the COVID 19 and the development of critical therapeutics. The only possible solution is the vaccine development targeting against all variant strains to halt its progress; the identified theoretical and practical knowledge can eliminate the gaps to improve a better understanding of the novel coronavirus structure and its design of a vaccine. In addition, to that the long-lasting protection is another challenging objective that need to be looked into.
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- 2021
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15. Combination of an Oxindole Derivative with (−)-β-Elemene Alters Cell Death Pathways in FLT3/ITD+ Acute Myeloid Leukemia Cells
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Jowaher Alanazi, Onur Bender, Rumeysa Dogan, Jonaid Ahmad Malik, Arzu Atalay, Taha F. S. Ali, Eman A. M. Beshr, Ahmed M. Shawky, Omar M. Aly, Yasir Nasser H. Alqahtani, and Sirajudheen Anwar
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acute myeloid leukemia ,FLT3 ,ITD ,β-elemene ,oxindole ,MV4-11 ,Organic chemistry ,QD241-441 - Abstract
Acute myeloid leukemia (AML) is one of the cancers that grow most aggressively. The challenges in AML management are huge, despite many treatment options. Mutations in FLT3 tyrosine kinase receptors make the currently available therapies less responsive. Therefore, there is a need to find new lead molecules that can specifically target mutated FLT3 to block growth factor signaling and inhibit AML cell proliferation. Our previous studies on FLT3-mutated AML cells demonstrated that β-elemene and compound 5a showed strong inhibition of proliferation by blocking the mutated FLT3 receptor and altering the key apoptotic genes responsible for apoptosis. Furthermore, we hypothesized that both β-elemene and compound 5a could be therapeutically effective. Therefore, combining these drugs against mutated FLT3 cells could be promising. In this context, dose–matrix combination-based cellular inhibition analyses, cell morphology studies and profiling of 43 different apoptotic protein targets via combinatorial treatment were performed. Our studies provide strong evidence for the hypothesis that β-elemene and compound 5a combination considerably increased the therapeutic potential of both compounds by enhancing the activation of several key targets implicated in AML cell death.
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- 2023
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16. A comprehensive phytochemical, biological, and toxicological studies of roots and aerial parts of Crotalaria burhia Buch.-Ham: An important medicinal plant
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Sirajudheen Anwar, Muhammad Faisal Nadeem, Irfan Pervaiz, Umair Khurshid, Nimra Akmal, Khurram Aamir, Muhammad Haseeb ur Rehman, Khaled Almansour, Farhan Alshammari, Mohd Farooq Shaikh, Marcello Locatelli, Nafees Ahemad, and Hammad Saleem
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Crotalaria burhia ,secondary metabolites ,antioxidant ,enzyme inhibition ,toxicity ,Plant culture ,SB1-1110 - Abstract
This study was designed to seek the phytochemical analysis, antioxidant, enzyme inhibition, and toxicity potentials of methanol and dichloromethane (DCM) extracts of aerial and root parts of Crotalaria burhia. Total bioactive content, high-performance liquid chromatography-photodiode array detector (HPLC-PDA) polyphenolic quantification, and ultra-high performance liquid chromatography-mass spectrometry (UHPLC-MS) analysis were utilized to evaluate the phytochemical composition. Antioxidant [including 2,2-diphenyl-1-picryl-hydrazyl-hydrate (DPPH)], 2,2′-azino-bis[3-ethylbenzothiazoline-6-sulfonic acid (ABTS), ferric reducing antioxidant power assay (FRAP), cupric reducing antioxidant capacity CUPRAC, phosphomolybdenum, and metal chelation assays] and enzyme inhibition [against acetylcholinesterase (AChE), butyrylcholinesterase (BChE), α-glucosidase, α-amylase, and tyrosinase] assays were carried out for biological evaluation. The cytotoxicity was tested against MCF-7 and MDA-MB-231 breast cell lines. The root-methanol extract contained the highest levels of phenolics (37.69 mg gallic acid equivalent/g extract) and flavonoids (83.0 mg quercetin equivalent/g extract) contents, and was also the most active for DPPH (50.04 mg Trolox equivalent/g extract) and CUPRAC (139.96 mg Trolox equivalent /g extract) antioxidant assays. Likewise, the aerial-methanol extract exhibited maximum activity for ABTS (94.05 mg Trolox equivalent/g extract) and FRAP (64.23 mg Trolox equivalent/g extract) assays. The aerial-DCM extract was noted to be a convincing cholinesterase (AChE; 4.01 and BChE; 4.28 mg galantamine equivalent/g extract), and α-glucosidase inhibitor (1.92 mmol acarbose equivalent/g extract). All of the extracts exhibited weak to modest toxicity against the tested cell lines. A considerable quantities of gallic acid, catechin, 4-OH benzoic acid, syringic acid, vanillic acid, 3-OH-4-MeO benzaldehyde, epicatechin, p-coumaric acid, rutin, naringenin, and carvacrol were quantified via HPLC-PDA analysis. UHPLC-MS analysis of methanolic extracts from roots and aerial parts revealed the tentative identification of important phytoconstituents such as polyphenols, saponins, flavonoids, and glycoside derivatives. To conclude, this plant could be considered a promising source of origin for bioactive compounds with several therapeutic uses.
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- 2022
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17. Prenatal Exposure to Gabapentin Alters the Development of Ventral Midbrain Dopaminergic Neurons
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Walaa F. Alsanie, Sherin Abdelrahman, Majid Alhomrani, Ahmed Gaber, Hamza Habeeballah, Heba A. Alkhatabi, Raed I. Felimban, Charlotte A. E. Hauser, Hossam H. Tayeb, Abdulhakeem S. Alamri, Bassem M. Raafat, Sirajudheen Anwar, Khaled A. Alswat, Yusuf S. Althobaiti, and Yousif A. Asiri
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gabapentin ,neurons ,morphogenesis ,pregnancy ,development ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Background: Gabapentin is widely prescribed as an off-label drug for the treatment of various diseases, including drug and alcohol addiction. Approximately 83–95% of the usage of gabapentin is off-label, accounting for more than 90% of its sales in the market, which indicates an alarming situation of drug abuse. Such misuse of gabapentin has serious negative consequences. The safety of the use of gabapentin in pregnant women has always been a serious issue, as gabapentin can cross placental barriers. The impact of gabapentin on brain development in the fetus is not sufficiently investigated, which poses difficulties in clinical decisions regarding prescriptions.Methods: The consequences effect of prenatal gabapentin exposure on the development of ventral midbrain dopaminergic neurons were investigated using three-dimensional neuronal cell cultures. Time-mated Swiss mice were used to isolate embryos. The ventral third of the midbrain was removed and used to enrich the dopaminergic population in 3D cell cultures that were subsequently exposed to gabapentin. The effects of gabapentin on the viability, ATP release, morphogenesis and genes expression of ventral midbrain dopaminergic neurons were investigated.Results: Gabapentin treatment at the therapeutic level interfered with the neurogenesis and morphogenesis of vmDA neurons in the fetal brain by causing changes in morphology and alterations in the expression of key developmental genes, such as Nurr1, Chl1, En1, Bdnf, Drd2, and Pitx3. The TH + total neurite length and dominant neurite length were significantly altered. We also found that gabapentin could halt the metabolic state of these neuronal cells by blocking the generation of ATP.Conclusion: Our findings clearly indicate that gabapentin hampers the morphogenesis and development of dopaminergic neurons. This implies that the use of gabapentin could lead to serious complications in child-bearing women. Therefore, caution must be exercised in clinical decisions regarding the prescription of gabapentin in pregnant women.
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- 2022
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18. Can Natural Products Targeting EMT Serve as the Future Anticancer Therapeutics?
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Sirajudheen Anwar, Jonaid Ahmad Malik, Sakeel Ahmed, Verma Abhishek Kameshwar, Jowaher Alanazi, Abdulwahab Alamri, and Nafees Ahemad
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epithelial-mesenchymal transition ,cancer EMT ,natural chemical entities ,cancer ,anticancer therapy ,chemotherapy ,Organic chemistry ,QD241-441 - Abstract
Cancer is the leading cause of death and has remained a big challenge for the scientific community. Because of the growing concerns, new therapeutic regimens are highly demanded to decrease the global burden. Despite advancements in chemotherapy, drug resistance is still a major hurdle to successful treatment. The primary challenge should be identifying and developing appropriate therapeutics for cancer patients to improve their survival. Multiple pathways are dysregulated in cancers, including disturbance in cellular metabolism, cell cycle, apoptosis, or epigenetic alterations. Over the last two decades, natural products have been a major research interest due to their therapeutic potential in various ailments. Natural compounds seem to be an alternative option for cancer management. Natural substances derived from plants and marine sources have been shown to have anti-cancer activity in preclinical settings. They might be proved as a sword to kill cancerous cells. The present review attempted to consolidate the available information on natural compounds derived from plants and marine sources and their anti-cancer potential underlying EMT mechanisms.
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- 2022
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19. Evaluation of the Phytochemical, Antioxidant, Enzyme Inhibition, and Wound Healing Potential of Calotropis gigantea (L.) Dryand: A Source of a Bioactive Medicinal Product
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Ahmed Alafnan, Swathi Sridharagatta, Hammad Saleem, Umair Khurshid, Abdulwahab Alamri, Shabana Yasmeen Ansari, Syafiq Asnawi Zainal Abidin, Siddique Akber Ansari, Abdulhakeem S. Alamri, Nafees Ahemad, and Sirajudheen Anwar
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Calotropis gigantea ,phytochemicals ,phenolic content ,antioxidant ,enzyme inhibition ,wound healing ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Traditionally, plants of the genus Calotropis have been used to cure various common diseases. The present research work explores the chemical and biological characterization of one of the most common species of this genus, i.e., Calotropis gigantea (L.) Dryand (syn. Calotropis gigantea (L.) Dryand.), having multiple folklore applications. The ethanolic extract of leaves of Calotropis gigantea (L.) Dryand was analyzed for the phytochemical composition by determining the total bioactive (total phenolic and total flavonoid) contents and UHPLC-MS secondary metabolites analysis. For phytopharmacological evaluation, in vitro antioxidant (including DPPH, ABTS, FRAP, CUPRAC, phosphomolybdenum, and metal chelation antioxidant assays) activities, enzyme inhibition potential (against AChE, BChE, α-amylase, and tyrosinase enzymes), and in vivo wound healing potential were determined. The tested extract has been shown to contain considerable flavonoid (46.75 mg RE/g extract) and phenolic (33.71 mg GAE/g extract) contents. The plant extract presented considerable antioxidant potential, being the most active for CUPRAC assays. Secondary metabolite UHPLC-MS characterization, in both the positive and negative ionization modes, indicated the tentative presence of 17 different phytocompounds, mostly derivatives of sesquiterpene, alkaloids, and flavonoids. Similarly, the tested extract exhibited considerable inhibitory effects on tyrosinase (81.72 mg KAE/g extract), whereas it showed weak inhibition ability against other tested enzymes. Moreover, in the case of in vivo wound healing assays, significant improvement in wound healing was observed in both the tested models at the doses of 0.5 percent w/w (p < 0.001) and 2.0 percent w/w (p < 0.01) on the 16th day. The outcomes of the present research work suggested that C. gigantea (L.) Dryand plant extract could be appraised as a potential origin of bioactive molecules having multifunctional medicinal uses.
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- 2021
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20. Multifaced Assessment of Antioxidant Power, Phytochemical Metabolomics, In-Vitro Biological Potential and In-Silico Studies of Neurada procumbens L.: An Important Medicinal Plant
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Umair Khurshid, Saeed Ahmad, Hammad Saleem, Arslan Hussain LodhI, Irfan Pervaiz, Mohsin Abbas Khan, Haroon Khan, Abdulwahab AlamrI, Mukhtar AnsarI, Marcello LocatellI, Muhammad Adeel Arshad, Muhammad Asif Wazir, Juwairiya Butt, and Sirajudheen Anwar
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Neurada procumbens ,HPLC-PDA ,GC-MS ,secondary metabolites ,antioxidant ,enzyme inhibition ,Organic chemistry ,QD241-441 - Abstract
This work was undertaken to explore the phytochemical composition, antioxidant, and enzyme-inhibiting properties of Neurada procumbens L. extracts/fractions of varying polarity (methanol extract and its fractions including n-hexane, chloroform, n-butanol, and aqueous fractions). A preliminary phytochemical study of all extracts/fractions, HPLC-PDA polyphenolic quantification, and GC-MS analysis of the n-hexane fraction were used to identify the phytochemical makeup. Antioxidant (DPPH), enzyme inhibition (against xanthine oxidase, carbonic anhydrase, and urease enzymes), and antibacterial activities against seven bacterial strains were performed for biological investigation. The GC-MS analysis revealed the tentative identification of 22 distinct phytochemicals in the n-hexane fraction, the majority of which belonged to the phenol, flavonoid, sesquiterpenoid, terpene, fatty acid, sterol, and triterpenoid classes of secondary metabolites. HPLC-PDA analysis quantified syringic acid, 3-OH benzoic acid, t-ferullic acid, naringin, and epicatechin in a significant amount. All of the studied extracts/fractions displayed significant antioxidant capability, with methanol extract exhibiting the highest radical-scavenging activity, as measured by an inhibitory percentage of 81.4 ± 0.7 and an IC50 value of 1.3 ± 0.3. For enzyme inhibition experiments, the n-hexane fraction was shown to be highly potent against xanthine oxidase and urease enzymes, with respective IC50 values of 2.3 ± 0.5 and 1.1 ± 0.4 mg/mL. Similarly, the methanol extract demonstrated the strongest activity against the carbonic anhydrase enzyme, with an IC50 value of 2.2 ± 0.4 mg/mL. Moreover, all the studied extracts/fractions presented moderate antibacterial potential against seven bacterial strains. Molecular docking of the five molecules β-amyrin, campesterol, ergosta-4,6,22-trien-3β-ol, stigmasterol, and caryophyllene revealed the interaction of these ligands with the investigated enzyme (xanthine oxidase). The results of the present study suggested that the N. procumbens plant may be evaluated as a possible source of bioactive compounds with multifunctional therapeutic applications.
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- 2022
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21. Anti-Inflammatory and Anti-Rheumatic Potential of Selective Plant Compounds by Targeting TLR-4/AP-1 Signaling: A Comprehensive Molecular Docking and Simulation Approaches
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Ashrafullah Khan, Shafi Ullah Khan, Adnan Khan, Bushra Shal, Sabih Ur Rehman, Shaheed Ur Rehman, Thet Thet Htar, Salman Khan, Sirajudheen Anwar, Ahmed Alafnan, and Kannan RR Rengasamy
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natural products ,TLR-4 ,NF-κB ,AP-1 ,inflammation ,Organic chemistry ,QD241-441 - Abstract
Plants are an important source of drug development and numerous plant derived molecules have been used in clinical practice for the ailment of various diseases. The Toll-like receptor-4 (TLR-4) signaling pathway plays a crucial role in inflammation including rheumatoid arthritis. The TLR-4 binds with pro-inflammatory ligands such as lipopolysaccharide (LPS) to induce the downstream signaling mechanism such as nuclear factor κappa B (NF-κB) and mitogen activated protein kinases (MAPKs). This signaling activation leads to the onset of various diseases including inflammation. In the present study, 22 natural compounds were studied against TLR-4/AP-1 signaling, which is implicated in the inflammatory process using a computational approach. These compounds belong to various classes such as methylxanthine, sesquiterpene lactone, alkaloid, flavone glycosides, lignan, phenolic acid, etc. The compounds exhibited different binding affinities with the TLR-4, JNK, NF-κB, and AP-1 protein due to the formation of multiple hydrophilic and hydrophobic interactions. With TLR-4, rutin had the highest binding energy (−10.4 kcal/mol), poncirin had the highest binding energy (−9.4 kcal/mol) with NF-κB and JNK (−9.5 kcal/mol), respectively, and icariin had the highest binding affinity (−9.1 kcal/mol) with the AP-1 protein. The root means square deviation (RMSD), root mean square fraction (RMSF), and radius of gyration (RoG) for 150 ns were calculated using molecular dynamic simulation (MD simulation) based on rutin’s greatest binding energy with TLR-4. The RMSD, RMSF, and RoG were all within acceptable limits in the MD simulation, and the complex remained stable for 150 ns. Furthermore, these compounds were assessed for the potential toxic effect on various organs such as the liver, heart, genotoxicity, and oral maximum toxic dose. Moreover, the blood–brain barrier permeability and intestinal absorption were also predicted using SwissADME software (Lausanne, Switzerland). These compounds exhibited promising physico-chemical as well as drug-likeness properties. Consequently, these selected compounds portray promising anti-inflammatory and drug-likeness properties.
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- 2022
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22. The Effects of Prenatal Exposure to Pregabalin on the Development of Ventral Midbrain Dopaminergic Neurons
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Walaa F. Alsanie, Majid Alhomrani, Ahmed Gaber, Hamza Habeeballah, Heba A. Alkhatabi, Raed I. Felimban, Sherin Abdelrahman, Charlotte A. E. Hauser, Adeel G. Chaudhary, Abdulhakeem S. Alamri, Bassem M. Raafat, Abdulwahab Alamri, Sirajudheen Anwar, Khaled A. Alswat, Yusuf S. Althobaiti, and Yousif A. Asiri
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pregabalin ,neuropathic pain ,embryonic neurons ,ventral midbrain dopaminergic neurons ,Cytology ,QH573-671 - Abstract
Pregabalin is widely used as a treatment for multiple neurological disorders; however, it has been reported to have the potential for misuse. Due to a lack of safety studies in pregnancy, pregabalin is considered the last treatment option for various neurological diseases, such as neuropathic pain. Therefore, pregabalin abuse in pregnant women, even at therapeutic doses, may impair fetal development. We used primary mouse embryonic neurons to investigate whether exposure to pregabalin can impair the morphogenesis and differentiation of ventral midbrain neurons. This study focused on ventral midbrain dopaminergic neurons, as they are responsible for cognition, movement, and behavior. The results showed that pregabalin exposure during early brain development induced upregulation of the dopaminergic progenitor genes Lmx1a and Nurr1 and the mature dopaminergic gene Pitx3. Interestingly, pregabalin had different effects on the morphogenesis of non-dopaminergic ventral midbrain neurons. Importantly, our findings illustrated that a therapeutic dose of pregabalin (10 μM) did not affect the viability of neurons. However, it caused a decrease in ATP release in ventral midbrain neurons. We demonstrated that exposure to pregabalin during early brain development could interfere with the neurogenesis and morphogenesis of ventral midbrain dopaminergic neurons. These findings are crucial for clinical consideration of the use of pregabalin during pregnancy.
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- 2022
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23. Clinical Efficacy of Hydroxychloroquine in Patients with COVID-19: Findings from an Observational Comparative Study in Saudi Arabia
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Saleh Alghamdi, Bassant Barakat, Ilhem Berrou, Abdulhakim Alzahrani, Abdul Haseeb, Mohamed Anwar Hammad, Sirajudheen Anwar, Abdulmajeed Abdulghani A. Sindi, Hussain A. Almasmoum, and Mohammad Albanghali
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Hydroxychloroquine ,COVID-19 ,hospital stay ,ICU ,mechanical ventilation ,Saudi Arabia ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The aim of this study was to assess the clinical effectiveness of Hydroxychloroquine-based regimens versus standard treatment in patients with the coronavirus disease admitted in 2019 to a hospital in Saudi Arabia. A comparative observational study, using routine hospital data, was carried out in a large tertiary care hospital in Al Baha, Saudi Arabia, providing care to patients with COVID-19 between April 2019 and August 2019. Patients were categorized into two groups: the Hydroxychloroquine (HCQ) group, treated with HCQ in a dose of 400 mg twice daily on the first day, followed by 200 mg twice daily; the non HCQ group, treated with other antiviral or antibacterial treatments according to protocols recommended by the Ministry of Health (MOH) at the time. The primary outcomes were the length of hospital stay, need for admission to the intensive care unit (ICU), time in ICU, and need for mechanical ventilation. Overall survival was also assessed. 568 patients who received HCQ (treatment group) were compared with 207 patients who did not receive HCQ (control group). HCQ did not improve mortality in the treated group (7.7% vs. 7.2%). There were no significant differences in terms of duration of hospitalization, need for and time in ICU, and need for mechanical ventilation among the groups. Our study provides further evidence that HCQ treatment does not reduce mortality rates, length of hospital stay, admission and time in ICU, and need for mechanical ventilation in patients hospitalized with COVID-19.
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- 2021
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24. HPLC–PDA Polyphenolic Quantification, UHPLC–MS Secondary Metabolite Composition, and In Vitro Enzyme Inhibition Potential of Bougainvillea glabra
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Hammad Saleem, Thet Thet Htar, Rakesh Naidu, Sirajudheen Anwar, Gokhan Zengin, Marcello Locatelli, and Nafees Ahemad
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b. glabra ,lipoxygenase ,phenolic compounds ,tyrosinase ,amylase ,Botany ,QK1-989 - Abstract
The plants of the Bougainvillea genus are widely explored regarding nutritive and medicinal purposes. In this study, dichloromethane (DCM) and methanol (MeOH) extracts of Bougainvillea glabra (Choisy.) aerial and flower parts were analyzed for high-performance liquid chromatography with photodiode array detection (HPLC−PDA), ultra-high-performance liquid chromatography−mass spectrometry (UHPLC−MS) phytochemical composition, and enzyme inhibition potential against key enzymes involved in diabetes (α-amylase), skin problems (tyrosinase), and inflammatory disorders (lipoxygenase (LOX)). HPLC−PDA quantification revealed the identification of nine different polyphenolics, amongst which both flower extracts were richest. The flower MeOH extract contained the highest amount of catechin (6.31 μg/g), gallic acid (2.39 μg/g), and rutin (1.26 μg/g). However, none of the quantified compounds were detected in the aerial DCM extract. UHPLC−MS analysis of DCM extracts revealed the tentative identification of 27 secondary metabolites, where the most common belonged to terpenoid, alkaloid, and phenolic derivatives. Similarly, for enzyme inhibition, all the extracts presented moderate activity against tyrosinase and α-amylases, whereas, for LOX, both methanolic extracts showed higher percentage inhibition compared with DCM extracts. Based on our findings, B. glabra could be regarded as a perspective starting material for designing novel pharmaceuticals.
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- 2020
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25. Docking Based 3D-QSAR Study of Tricyclic Guanidine Analogues of Batzelladine K As Anti-Malarial Agents
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Nafees Ahmed, Sirajudheen Anwar, and Thet Thet Htar
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batzelladine analogs ,molecular docking ,Discovery studio ,anti-malarial ,CDOCKER ,3D-QSAR ,Chemistry ,QD1-999 - Abstract
The Plasmodium falciparum Lactate Dehydrogenase enzyme (PfLDH) catalyzes inter-conversion of pyruvate to lactate during glycolysis producing the energy required for parasitic growth. The PfLDH has been studied as a potential molecular target for development of anti-malarial agents. In an attempt to find the potent inhibitor of PfLDH, we have used Discovery studio to perform molecular docking in the active binding pocket of PfLDH by CDOCKER, followed by three-dimensional quantitative structure-activity relationship (3D-QSAR) studies of tricyclic guanidine batzelladine compounds, which were previously synthesized in our laboratory. Docking studies showed that there is a very strong correlation between in silico and in vitro results. Based on docking results, a highly predictive 3D-QSAR model was developed with q2 of 0.516. The model has predicted r2 of 0.91 showing that predicted IC50 values are in good agreement with experimental IC50 values. The results obtained from this study revealed the developed model can be used to design new anti-malarial compounds based on tricyclic guanidine derivatives and to predict activities of new inhibitors.
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- 2017
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26. Integrated computational approaches for designing potent pyrimidine-based CDK9 inhibitors: 3D-QSAR, docking, and molecular dynamics simulations.
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Iffat Habib, Tahir Ali Chohan, Talha Ali Chohan, Fakhra Batool, Umair Khurshid, Anjum Khursheed, Ali Raza, Mukhtar Ansari, Arshad Hussain, Sirajudheen Anwar, Nasser A. Awadh Ali, and Hammad Saleem
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- 2024
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27. Vanillin-Based Indolin-2-one Derivative Bearing a Pyridyl Moiety as a Promising Anti-Breast Cancer Agent via Anti-Estrogenic Activity
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Onur Bender, Ismail Celik, Rumeysa Dogan, Arzu Atalay, Mai E. Shoman, Taha F. S. Ali, Eman A. M. Beshr, Mahmoud Mohamed, Eman Alaaeldin, Ahmed M. Shawky, Eman M. Awad, Al-Shaimaa F. Ahmed, Kareem M. Younes, Mukhtar Ansari, and Sirajudheen Anwar
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General Chemical Engineering ,General Chemistry - Published
- 2023
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28. Synthesis, Molecular Docking, and Dynamic Simulation Targeting Main Protease (Mpro) of New, Thiazole Clubbed Pyridine Scaffolds as Potential COVID-19 Inhibitors
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SIRAJUDHEEN ANWAR, Abdulwahab Alamri, Sobhi M.Gomha, Ibrahim Khadra, Amr Abouzied, Mukhtar Ansari, Yasser Zaki, and Adel Alghamdi
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Microbiology (medical) ,hydrazonoyl chlorides ,schiff bases ,COVID-19 ,molecular docking ,General Medicine ,Molecular Biology ,Microbiology ,acetyl pyridines ,thiazoles - Abstract
Many biological activities of pyridine and thiazole derivatives have been reported, including antiviral activity and, more recently, as COVID-19 inhibitors. Thus, in this paper, we designed, synthesized, and characterized a novel series of N-aminothiazole-hydrazineethyl-pyridines, beginning with a N′-(1-(pyridine-3-yl)ethylidene)hydrazinecarbothiohydrazide derivative and various hydrazonoyl chlorides and phenacyl bromides. Their Schiff bases were prepared from the condensation of N-aminothiazole derivatives with 4-methoxybenzaldehyde. FTIR, MS, NMR, and elemental studies were used to identify new products. The binding energy for non-bonding interactions between the ligand (studied compounds) and receptor was determined using molecular docking against the SARS-CoV-2 main protease (PDB code: 6LU7). Finally, the best docked pose with highest binding energy (8a = −8.6 kcal/mol) was selected for further molecular dynamics (MD) simulation studies to verify the outcomes and comprehend the thermodynamic properties of the binding. Through additional in vitro and in vivo research on the newly synthesized chemicals, it is envisaged that the achieved results will represent a significant advancement in the fight against COVID-19.
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- 2023
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29. Comparative phytochemical composition, oleuropein quantification, antioxidant and cytotoxic properties of Olea europaea L. leaves
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Sirajudheen Anwar, Hammad Saleem, Umair Khurshid, Shabana Yasmeen Ansari, Saleh Alghamdi, Abdul Wali A. Al-Khulaidi, Jonaid Ahmad Malik, Nafees Ahemad, and Nasser A. Awadh Ali
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Organic Chemistry ,Plant Science ,Biochemistry ,Analytical Chemistry - Abstract
In the present research, oleuropein (OLE) contents from two Saudi Arabian wild olive trees (Olea europaea L.) leaves (O1 and O2), were collected from two nearby geographical sites differing in altitudes, and were determined via UHPLC-MS analysis. Moreover, total bioactive contents, antioxidant, and cytotoxicity (against MCF-7 and MDA-MB-231 cells) potential were also evaluated. The sample (O2) was found to contain significantly (p < 0.05) higher OLE content (4.13 ± 1.0 mg/g DW) compared with the sample (O1) having OLE content (3.63 ± 1.1 mg/g DW). A similar trend was observed regarding total bioactive contents and antioxidant potential. However, both samples exhibited low cytotoxicity against tested cell lines. Furthermore, with hierarchical cluster analysis that compared the results of our samples (O1 and O2) to other samples reported in the literature, it was found that the variance in OLE content and biological activities from Al Baha region leaves had a resemblance to other reported superior cultivars.
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- 2022
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30. Phytochemical, pharmacological, and In-silico molecular docking studies of Strobilanthes glutinosus Nees: An unexplored source of bioactive compounds
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Saeed Ahmad, Tahir Ali Chohan, Hammad Saleem, Marya Aziz, Kashif-ur-Rehman, Abdulwahab Alamri, Abdulhakeem S. Alamri, Sirajudheen Anwar, Muhammad Nouman Iqbal, and Umair Khurshid
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chemistry.chemical_classification ,Antioxidant ,biology ,Urease ,Traditional medicine ,DPPH ,medicine.medical_treatment ,Flavonoid ,Acanthaceae ,Plant Science ,biology.organism_classification ,chemistry.chemical_compound ,chemistry ,Phytochemical ,biology.protein ,medicine ,Strobilanthes ,Medicinal plants - Abstract
Strobilanthes glutinosus (family: Acanthaceae) is one of the important medicinal plants and the current research work was carried out to assess the phytochemical, biological, and in-silico evaluations of different solvent extracts of S. glutinosus. The phytochemical composition was assessed by determining qualitative phytochemical testing, total bioactive contents, and GC-MS analysis. For biological evaluation, antioxidant (DPPH and FRAP), antibacterial, and enzyme inhibition (urease) potential were determined. The methanol extract was found to contain the highest total phenolic (247.85 mg GAE/g extract), and flavonoid content (71.91 mg QAE/g extract), which can be correlated to the observed higher antioxidant potential of this extract. On the contrary, the n-hexane extract presented maximum anti-urease activity with IC50 value of 0.244 mg/ml, whereas, in the case of antibacterial assays, a dose-dependent activity was observed. Similarly, the GC-MS investigation of methanol extract and n-hexane fraction revealed the tentative identification of several important classes of secondary metabolites. Furthermore, the main compounds as identified by GC-MS were further studied for in-silico molecular docking studies in order to highlight any interactions between the compounds identified and the urease enzyme. Overall, the present investigation highlighted the studied plant extracts to be considered further for the isolation of bioactive compounds for the pharmaceutical and food industry.
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- 2022
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31. The Impact of COVID-19 On Comorbidities: A Review Of Recent Updates For Combating It
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Jonaid Ahmad Malik, Sakeel Ahmed, Mrunal Shinde, Mohammad Hajaj Said Almermesh, Saleh Alghamdi, Arshad Hussain, and Sirajudheen Anwar
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General Agricultural and Biological Sciences - Abstract
Coronavirus disease is caused by the SARS-CoV-2 virus. The virus first appeared in Wuhan (China) in December 2019 and has spread globally. Till now, it affected 269 million people with 5.3 million deaths in 224 countries and territories. With the emergence of variants like Omicron, the COVID-19 cases grew exponentially, with thousands of deaths. The general symptoms of COVID-19 include fever, sore throat, cough, lung infections, and, in severe cases, acute respiratory distress syndrome, sepsis, and death. SARS-CoV-2 predominantly affects the lung, but it can also affect other organs such as the brain, heart, and gastrointestinal system. It is observed that 75 % of hospitalized COVID-19 patients have at least one COVID-19 associated comorbidity. The most common reported comorbidities are hypertension, NDs, diabetes, cancer, endothelial dysfunction, and CVDs. Moreover, older and pre-existing polypharmacy patients have worsened COVID-19 associated complications. SARS-CoV-2 also results in the hypercoagulability issues like gangrene, stroke, pulmonary embolism, and other associated complications. This review aims to provide the latest information on the impact of the COVID-19 on pre-existing comorbidities such as CVDs, NDs, COPD, and other complications. This review will help us to understand the current scenario of COVID-19 and comorbidities; thus, it will play an important role in the management and decision-making efforts to tackle such complications.
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- 2022
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32. Discovery of oxindole-based FLT3 inhibitors as a promising therapeutic lead for acute myeloid leukemia carrying the oncogenic ITD mutation
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Onur Bender, Mai E. Shoman, Taha F. S. Ali, Rumeysa Dogan, Ismail Celik, Adriano Mollica, Mohammed I. A. Hamed, Omar M. Aly, Abdulwahab Alamri, Jowaher Alanazi, Nafees Ahemad, Siew Hua Gan, Jonaid Ahmad Malik, Sirajudheen Anwar, Arzu Atalay, and Eman A. M. Beshr
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Drug Discovery ,Pharmaceutical Science - Abstract
© 2022 Deutsche Pharmazeutische Gesellschaft.FMS-like tyrosine kinase 3 (FLT3) mutations occur in approximately 30% of acute myeloid leukemia (AML) patients. In the current study, the oxindole chemotype is employed as a structural motif for the design of new FLT3 inhibitors as potential hits for AML irradiation. Cell-based screening was performed with 18 oxindole derivatives and 5a–c inhibited 68%–73% and 83%–91% of internal tandem duplication (ITD)-mutated MV4-11 cell growth for 48- and 72-h treatments while only 0%–2% and 27%–39% in wild-type THP-1 cells. The most potent compound 5a inhibited MV4-11 cells with IC50 of 4.3 µM at 72 h while it was 8.7 µM in THP-1 cells, thus showing two-fold selective inhibition against the oncogenic ITD mutation. The ability of 5a to modulate cell death was examined. High-throughput protein profiling revealed low levels of the growth factors IGFBP-2 and -4 with the blockage of various apoptotic inhibitors such as Survivin. p21 with cellular stress mechanisms was characterized by increased expression of HSP proteins along with TNF-β. Mechanistically, compounds 5a and 5b inhibited FLT3 kinase with IC50 values of 2.49 and 1.45 µM, respectively. Theoretical docking studies supported the compounds' ability to bind to the FLT3 ATP binding site with the formation of highly stable complexes as evidenced by molecular dynamics simulations. The designed compounds also provide suitable drug candidates with no violation of drug likeability rules.
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- 2023
33. Emerging Selenium Nanoparticles for CNS Intervention
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Ahmad, Malik, Jonaid, Jeba, AjgarAnsari, Sakeel, Ahmed, Archana, Rani, Yasmeen, Ansari, Shabana, and Sirajudheen, Anwar
- Abstract
Central nervous system (CNS) diseases have seriously impacted human wellness for the past few decades, specifically in developing countries, due to the unavailability of successful treatment. Due to the blood-brain barrier (BBB) and blood-cerebrospinal fluid barrier transport of drug and treatment of CNS disorders has become difficult. Nanoscale materials like Selenium nanoparticles (SeNPs) offer a possible therapeutic strategy for treating brain diseases like Alzheimer’s, Frontotemporal dementia, Amyotrophic lateral sclerosis, Epilepsy, Parkinson’s disease, and Huntington’s disease. After being functionalized with active targeting ligands, SeNPs are versatile and competent in conveying combinations of cargoes to certain targets. We shall pay close attention to the primarily targeted therapies for SeNPs in CNS diseases. The objective of this paper was to highlight new developments in the exploration of SeNP formation and their potential applications in the management of CNS diseases. Furthermore, we also discussed the mechanisms underlying management of CNS disease, several therapeutic potentials for SeNPs, and the results of their preclinical research using diverse animal models. These methods might lead to better clinical and diagnostic results.
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- 2023
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34. In Silico Screening of Marine Compounds as an Emerging and Promising Approach against Estrogen Receptor Alpha-Positive Breast Cancer
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Abdulwahab Alamri, Abdur Rauf, Anees Ahmed Khalil, Adel Alghamdi, Ahmed Alafnan, Abdulrahman Alshammari, Farhan Alshammari, Jonaid Ahmed Malik, and Sirajudheen Anwar
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Article Subject ,General Immunology and Microbiology ,Medicine ,General Medicine ,General Biochemistry, Genetics and Molecular Biology ,Research Article - Abstract
Presently, the majority of breast tumors are estrogen receptor (ER) positive. Breast cancer (BC) is defined by uncontrolled cell proliferation (CP) in breast tissue. BCs are caused by the overexpression of genes that promote CP in breast cells. The discovery of effective inhibitors is an excellent chemopreventive method. Our in silico approach analysis offers a pharmacoinformatics methodology for identifying lead molecules targeting cochaperone HSP90 and the epidermal growth factor receptors (EGFR) and human epidermal growth factor receptor 2 (HER2)/neu receptor. BC has been associated with the high expression of these targets. The use of drug-likeness filters aided in determining the therapeutic properties of possible lead compounds. In this study, docking-based virtual screening (VS) was performed. Database of about 450 cancer marine compounds was used. The X-ray-assisted structure of ERα with 4-OHT (PDB code: 3ERT) was chosen for 4-OHT. A docking-based virtual screening was performed on the dataset supplied using the molecular operating environment (MOE) dock application. The binding energy (BE) and explanation of the protein inhibitor interaction (PII) are crucial findings for future both in terms of dry or wet lab research. The GBVI/WAS binding-free energy assessment (in kcal/mol) scores were used to grade the compounds. Compounds with a BE of less than -9.500 kcal/mol were deemed to be the most effective inhibitors. For further analysis, the top seven structurally diverse scaffolds were selected. Seven marine compounds exhibited the best docking score, which validates them to be potent anti-BC compounds. These compounds’ bioactive potential and prospective drug-likeness profile make them promising leads for further experimental research.
- Published
- 2021
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35. Docking-based virtual screening and identification of potential COVID-19 main protease inhibitors from brown algae
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Kannan R.R. Rengasamy, Shahid Ali Khan, Sirajudheen Anwar, Abdulhakeem S. Alamri, Ahmed Alafnan, Umer Rashid, Abdur Rauf, and Anees Ahmed Khalil
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medicine.medical_specialty ,Virtual screening ,Protease ,Public health ,medicine.medical_treatment ,Mortality rate ,Outbreak ,Structure-based virtual screening ,Plant Science ,Biology ,Seaweed ,Virology ,Article ,Virus ,Docking-based VS ,Pandemic ,medicine ,Viral disease ,Covid-19 - Abstract
COVID-19 (SARS-CoV-2) is a viral disease that causes acute respiratory syndrome, which has increased the morbidity and mortality rate throughout the world. World Health Organization has declared this COVID-19 outbreak as pandemic and classified health emergency throughout the world. In the recent past, outbreaks of SARS and MERS have shown the interspecies transmission potential of coronaviruses and limitations of already prescribed drugs to overcome this global public health issue. Therefore, there is a dire need to identify a new regimen of targeted drugs from natural compounds having anti-COVID19 potential. This study aimed at screening 1018 brown algal natural compounds (many of them previously reported to have immunomodulatory effects) having probable anti-COVID19 potentials. The source compounds were extracted from MarinLit, a database dedicated to marine natural products and screened against COVID-19 main protease. The top seven compounds were further analysed, and their interactions with the active site were visualized. This study will further warrant screening the potent compounds against the virus in in-vitro conditions.
- Published
- 2021
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36. An overview of SARS-COV-2 epidemiology, mutant variants, vaccines, and management strategies
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Almas Hanif Mulla, Jonaid Ahmad Malik, Turki Al Hagbani, Saleh Alghamdi, Sirajudheen Anwar, Mohammed Abrar Ubaid, Khaled Almansour, and Tahmeena Farooqi
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Epidemiology ,ERGIC, endoplasmic reticulum- golgi intermediate compartment ,DMVs, double-membrane vesicles ,MVA, modified vaccinia virus Ankara ,Disease ,IMV, Instruments de Médecine Vétérinaire ,RVF, Rift Valley fever ,IDIBAPS, Pi i Sunyer Biomedical Research Institute ,FiO2, fraction of inspired oxygen ,CCHFV, Crimean-Congo hemorrhagic fever virus ,LiteVax BV, spike-based (epitope screening) ,Medicine ,ExoN, exoribonuclease ,SpO2, oxygen saturation ,CARDS, Covid 19 acute respiratory distress syndrome ,Coronavirus ,NSP, non-Structural proteins ,IEM, Institute For Engineering in Medicine ,RBD, receptor-binding domain ,SRC VB VECTOR, State Research Centre of Virology and Biotechnology ,General Medicine ,TRSs, transcriptional regulatory sequences ,Variant strains ,COVID-19, corona virus disease 2019 ,VLP, virus like particle ,CNRS, centre national de la recherche scientifique ,Workforce ,ARTES, Germany: based biotechnology company specialized in recombinant protein production and process development from microbial expression systems ,CRP, C-reactive protein ,LVVV, live viral vectored vaccine ,Public aspects of medicine ,MIGAL, Galilee Research Institute Ltd ,O-MT, O-methyl transferase-2 ,medicine.medical_specialty ,MARV, Marburg virus ,USAMRIID/WARIAR, United States Army Medical Research Institute of Infectious ,MMR, measles mumps rubella ,NiV, Nippa virus ,Humans ,LLC, low lung compliance ,Intensive care medicine ,PaCO2, partial pressure of carbon dioxide ,VOHC, variant of high consequences ,NERVTAG, new and emerging respiratory virus Threats advisory group ,OMV, outer membrane vesicle ,Osivax, clinical stage biotechnology company ,GPO, Government Pharmaceutical Organization ,VOC, variant of concern ,NLC, nanostructured Lipid Carriers ,MDA5, melanoma differentiation associated protein ,Public Health, Environmental and Occupational Health ,NIV, non-invasive ventilation ,medicine.disease ,InfA, influenza virus-A ,COPD, chronic obstructive pulmonary disease ,CPAP, continuous positive airway pressure ,VEE, Venezuelan equine encephalitis ,SARS-CoV-2, severe acute respiratory syndrome coronavirus-2 ,CBC, complete blood count ,ADRP, ADP ribose-1′-phosphatase ,CNBG, China National Biotec Group ,INRAE, National Research Institute for Agriculture, Food and Environment ,CHIKV, chikungunya virus ,PEEP, positive end-expiratory pressure ,Infectious and parasitic diseases ,RC109-216 ,RTC, replication transcription complex ,medicine.disease_cause ,WHO landscape ,CDC, center for disease control and prevention ,PaO2, partial pressure of oxygen ,VOI, variant of interest ,IAVI, international AIDS vaccine initiative ,GCIR, German Center for Infection Research ,Vaccines ,SIG, SARS-COV-2 Interagency Group ,MERS-CoV, Middle East Respiratory Syndrome coronavirus ,CanVirex AG, Swiss Biotech Association ,Vaccine candidates ,LinKinVax, French biotechnology startup that focuses on speeding up vaccine ,Infectious Diseases ,Original Article ,EBOV, Ebola virus ,RA1-1270 ,GMV, glycine mosaic virus ,IPV, inactivated polio virus ,COVID-19 Vaccines ,VSV, vesicular stomatitis virus ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,SARS-COV-2 ,ORFs, open reading frames ,LASSA, lassa virus ,P.C., preclinical ,ACE2, angiotensin-converting enzyme-2 ,RdRp, RNA dependent RNA polymerase ,VRI, Vaccine Research Institute ,TMPRSS2, transmembrane protein serine 2 ,NSCLC, non-small cell lung cancer ,ECDC, European Centre for Disease Prevention and Control ,HeV, hepatitis virus E ,GLA, glucopyranosyl Lipid A ,LASV, lassa mammarenavirus ,DWRAIR, Diseases/Walter Reed Army Institute of Research ,DZIF, German Center for Infection Research ,business.industry ,COVID-19 ,HLC, high lung compliance ,PPI, proton pump inhibitors ,CMV, cytomegalovirus ,Vaccine efficacy ,RTI, respiratory tract infections ,HBV, hepatitis B virus ,NORV, norovirus ,HFNC, high-flow nasal cannula ,Middle East respiratory syndrome ,CEA, carcinoembryonic antigen ,business ,BIOCAD, BIO computer aided design RNA - Abstract
Background: Over the last two decades, humanity has observed the extraordinary anomaly caused by novel, weird coronavirus strains, such as severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS). As the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) virus has made its entry into the world, it has dramatically affected life in every domain by continuously producing new variants. The vaccine development is an ongoing process, although some vaccines got marketed. The big challenge is now whether the vaccine candidates can provide long-lasting protection or prevention against mutant variants. Methods: The information was gathered from various journals, electronic searches via Internet-based information such as PubMed, Google Scholar, Science Direct, online electronic journals, WHO landscape, world meters, WHO website, and News. Results: This review will present and discuss some coronavirus disease 19 (COVID-19) related aspects including: the pathophysiology, epidemiology, mutant variants vaccine candidates, vaccine efficacy, and management strategies. Due to the high death rate, continuous spread, an inadequate workforce, lack of required therapeutics, and incomplete understanding of the viral strain, it becomes crucial to build the knowledge of its biological characteristics and make available the rapid diagnostic and vital therapeutic machinery for the combat and management of an infection. Conclusion: The data summarizes current research on the COVID 19 infection and therapeutic interventions, which will direct future decision-making on the effort-worthy phases of the COVID 19 and the development of critical therapeutics. The only possible solution is the vaccine development targeting against all variant strains to halt its progress; the identified theoretical and practical knowledge can eliminate the gaps to improve a better understanding of the novel coronavirus structure and its design of a vaccine. In addition, to that the long-lasting protection is another challenging objective that need to be looked into.
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- 2021
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37. Edible mushrooms show significant differences in sterols and fatty acid compositions
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Kannan R.R. Rengasamy, Anees Ahmed Khalil, Sirajudheen Anwar, Abdulwahab Alamri, Abdur Rauf, Ramesh Kumar Saini, Young-Soo Keum, and Eun-Young Ko
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0106 biological sciences ,chemistry.chemical_classification ,Ergosterol ,Mushroom ,Fatty acid ,Plant Science ,01 natural sciences ,0104 chemical sciences ,Palmitic acid ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,chemistry ,Dry weight ,Gas chromatography ,Food science ,Stearic acid ,010606 plant biology & botany - Abstract
Mushrooms are well-known for their richness of health-beneficial bioactive metabolites. In recent years, consumer interests regarding fatty acid compositions of different foods are increasing. Thus, the present study was designed to characterize sterols and fatty acid compositions of fifteen types of edible mushrooms marketed in Korea utilizing gas chromatography (GC)-flame ionization detection (FID) and GC-mass spectrometry (MS). Among all studied samples, significant variations were recorded for contents of sterols. Among all sterols identified and quantified, ergosterol (ergosta-5,7,22-trien- 3β-ol) was found to be the most abundant (774.2–82.1 mg/100 g dry weight (DW)), with minor presence of ergosta-5,7-dien-3β-ol, ergosta-7-3β-ol, and ergosta-7,22-dien-3β-ol. Regarding fatty acid compositions, linoleic (C18:2n6c) was recorded in the highest quantity (79.5% of total fatty acids), followed by palmitic, oleic, and stearic acid. These four fatty acids together accounted for 64.8% (Santali; No 3) to 96.6% (‘DDL01’ ferulae; No 9) of total fatty acids. Exceptionally, in ‘Nolu’ Lion's mane (No. 5) mushrooms, palmitic acid had the highest quantity (34.9% of total fatty acids), followed by linoleic (24.5% of total), oleic, and stearic acid. Fat quality indices such as the ratio of hypocholesterolemic/hypercholesterolemic fatty acids, atherogenic index, and thrombogenic index from these studied mushrooms indicate that mushroom fats are beneficial for health.
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- 2021
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38. Can be marine bioactive peptides (MBAs) lead the future of foodomics for human health?
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Abdur Rauf, Muneeb Khan, Kannan R.R. Rengasamy, Sirajudheen Anwar, Farhan Alshammari, Abdulwahab Alamri, Adel Alghamdi, Chunpeng Wan, Anees Ahmed Khalil, and Abdulmalik M. Alqarni
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Aquatic Organisms ,030309 nutrition & dietetics ,Human immunodeficiency virus (HIV) ,Biology ,medicine.disease_cause ,Marine species ,Industrial and Manufacturing Engineering ,03 medical and health sciences ,Human health ,0404 agricultural biotechnology ,Nutraceutical ,Foodomics ,Biological property ,Drug Discovery ,medicine ,Animals ,Humans ,0303 health sciences ,business.industry ,Drug discovery ,Fungi ,04 agricultural and veterinary sciences ,General Medicine ,Biological potential ,040401 food science ,Biotechnology ,Mollusca ,Peptides ,business ,Food Science - Abstract
Marine organisms are considered a cache of biologically active metabolites with pharmaceutical, functional, and nutraceutical properties. Among these, marine bioactive peptides (MBAs) present in diverse marine species (fish, sponges, cyanobacteria, fungi, ascidians, seaweeds, & mollusks) have acquired attention owing to their broad-spectrum health-promoting benefits. Nowadays, scientists are keener exploring marine bioactive peptides precisely due to their unique structural and biological properties. These MBAs have reported ameliorating potential against different diseases like hypertension, diabetes, obesity, HIV, cancer, oxidation, and inflammation. Furthermore, MBAs isolated from various marine organisms may also have a beneficial role in the cosmetic, nutraceutical, and food industries. Few marine peptides and their derivative are approved for commercial use, while many MBAs are in various pre-clinical and clinical trials. This review mainly focuses on the diversity of marine bioactive peptides in marine organisms and their production procedures, such as chemical and enzymatic hydrolysis. Moreover, MBAs' therapeutic and biological potential has also been critically discussed herein, along with their status in drug discovery, pre-clinical and clinical trials.
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- 2021
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39. Physician’s Knowledge and Attitudes on Antibiotic Prescribing and Resistance: A Cross-Sectional Study from Hail Region of Saudi Arabia
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Khaled Almansour, Jonaid Ahmad Malik, Ishfaq Rashid, Sakeel Ahmed, Mir Aroosa, Jehad M. Alenezi, Mohammed A. Almatrafi, Abdulmajeed A. Alshammari, Kashif Ullah Khan, and Sirajudheen Anwar
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antibiotic resistance ,prescribing pattern ,physician’s attitude ,Hail region ,Saudi Arabia ,Health Information Management ,Leadership and Management ,Health Policy ,Health Informatics - Abstract
Background: Antibiotic (AB) resistance is caused partly by overuse, varies by region, and is influenced by prescriber perspectives. This study sought to determine physicians’ knowledge and attitudes toward AB prescribing, particularly in the Hail region of Saudi Arabia. Methods: An interdisciplinary team created and validated an electronic questionnaire via the test–retest method that measured reliability and consistency. The 19 questions covered the following subjects: demographic information (7), experience with AB resistance in daily work (3), AB prescribing behavior (2), communication with patients regarding AB resistance (3), and prescribing practices (4). The revised questionnaire was prepared and distributed to physicians in the Hail region via multiple electronic communication channels. Inferences were drawn based on descriptive statistics and multivariate regression analysis. Results: The questionnaire responses of 202 participants were eligible for analysis. A total of 70 (34.80%) participants were general practitioners, 78 (38.12%) were engaged in daily work that was only mildly related to AB resistance, and 25 (12.37%) performed work that was substantially related to AB resistance. A total of 88 (43.56%) physicians believed that prescribing behavior contributed to the emergence of AB resistance, whereas 68 (33.66%) did not. Regarding exposure, 51 (25.24%) physicians reported encountering instances of AB resistance monthly, whereas 104 (51.48%) reported seeing cases of AB resistance very rarely. In terms of prescribing practices, 99 (49.0%) physicians prescribed ABs to patients daily and 73 (36.13%) weekly. Regarding AB-resistance-related communication with patients, 73 (36.13%) physicians frequently discussed AB resistance with patients suffering from infections, whereas 13 (6.4%) never discussed it with patients. Conclusion: General practitioners in the Hail region exhibited comprehensive awareness of the elements that contribute to AB resistance but only rarely communicated about the issue with their patients, presuming the latter to be oblivious to the science behind AB resistance. Our findings suggest that the features underlying practitioners’ AB prescribing behavior could be a powerful strategy for lowering AB resistance.
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- 2023
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40. A comprehensive review on the botany, traditional uses, phytochemistry, pharmacology and toxicity of Anagallis arvensis (L).: A wild edible medicinal food plant
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Hammad Saleem, Umair Khurshid, Muhammad Imran Tousif, Sirajudheen Anwar, Nasser A. Awadh Ali, Mohamad Fawzi Mahomoodally, and Nafees Ahemad
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Biochemistry ,Food Science - Published
- 2023
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41. Cluster Identification of Diabetic Risk Factors among Saudi Population
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Elisabetta Ricciardi, Abdulwahab Alamri, Abdulhakeem S. Alamri, Ahmed Alafnan, Aali Alqarni, Sowmya Mathew, Saleh Alghamdi, Sirajudheen Anwar, and Mukhtar Ansari
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education.field_of_study ,business.industry ,Diabetes mellitus ,Environmental health ,Population ,Adult population ,Medicine ,Observational study ,business ,medicine.disease ,education ,High body mass index ,Elevated body mass index - Abstract
Aims: The aim of the study was to estimate the prevalence and risk factors of diabetes mellitus among adult population of Albaha region, Saudi Arabia and to identify the diabetic risk clusters among Saudi population using various cluster analysis techniques. Study Design: Cross-sectional observation and Hierarchal cluster analyses. Place and Duration of Study: The study was conducted in three different cities of the Albaha region, Saudi Arabia including Albaha, AlAqiq and Baljurashi among Saudi adults 15 years of age or above. The study was carried out from April 2019 to May 2019. Methodology: The first part of the research was a random cross-sectional observational diabetic risk factors screening using a structured questionnaire among adult volunteers of the Albaha region. The second part constituted a multiple cluster analysis technique performed to identify the diabetic risk factors from 13 regions of Saudi Arabia, clustered into five main regions, using NCSS software. Results: In the first part, the risk factors identified among non-diabetic participants showed a significant association with the development of diabetes mellitus, particularly physical inactivity (49.12%), hypertension (41.15%), and high body mass index (19.03%). Likewise, in 11.54% of diabetic patients, elevated body mass index (30.51%), hypertension (27.12%) and physical inactivity (55.93%), which could be associated with diabetic complications. In the second part, the three forms of cluster analyses (the agglomerate hierarchical cluster, clustered heat map and K means clustering analysis) identified physical inactivity and high body mass index as key risk factors which are connected to all other risk factors among the total of 213591 volunteers. Conclusion: Increased prevalence of diabetes and risk of developing diabetes mellitus in the Kingdom require substantial education and training programs to counsel volunteers on all aspects of self-care. Our data provides a robust evidence to establish diabetic counseling through regular diabetes awareness program that can reduce the risk of developing diabetes mellitus.
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- 2021
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42. Breast Cancer Drug Repurposing a Tool for a Challenging Disease
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Jonaid Ahmad Malik, Rafia Jan, Sakeel Ahmed, and Sirajudheen Anwar
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Drug repurposing is one of the best strategy for drug discovery. There are several examples where drug repurposing has revolutionized the drug development process, such as metformin developed for diabetes and is now employed in polycystic ovarian syndrome. Drug repurposing against breast cancer is currently a hot topic to look upon. With the continued rise in breast cancer cases, there is a dire need for new therapies that can tackle it in a better way. There is a rise of resistance to current therapies, so drug repurposing might produce some lead candidates that may be promising to treat breast cancer. We will highlight the breast cancer molecular targets, currently available drugs, problems with current therapy, and some examples that might be promising to treat it.
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- 2022
43. Drugs repurposed: An advanced step towards the treatment of breast cancer and associated challenges
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Jonaid Ahmad Malik, Sakeel Ahmed, Aali Alqarni, Turki Al Hagbani, Onur Bender, Sirajudheen Anwar, and Bisma Jan
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Oncology ,Proteomics ,medicine.medical_specialty ,Drug repurposing ,Antineoplastic Agents ,Breast Neoplasms ,RM1-950 ,Molecular mechanism ,Breast cancer ,Internal medicine ,medicine ,Animals ,Humans ,Pharmacology ,Repurposing challenges ,business.industry ,Drug Repositioning ,General Medicine ,Genomics ,medicine.disease ,Drug Resistance, Neoplasm ,Drug resistance ,Female ,Therapeutics. Pharmacology ,business - Abstract
Breast cancer (BC) is mostly observed in women and is responsible for huge mortality in women subjects globally. Due to the continued development of drug resistance and other contributing factors, the scientific community needs to look for new alternatives, and drug repurposing is one of the best opportunities. Here we light upon the drug repurposing with a major focus on breast cancer. BC is a division of cancer known as the leading cause of death of 2.3 million women globally, with 685,000 fatalities. This number is steadily rising, necessitating the development of a treatment that can extend survival time. All available treatments for BC are very costly as well as show side effects. This unfulfilled requirement of the anti-cancer drugs ignited an enthusiasm for drug repositioning, which means finding out the anti-cancer use of already marketed drugs for other complications. With the advancement in proteomics, genomics, and computational approaches, the drug repurposing process hastens. So many drugs are repurposed for the BC, including alkylating agents, antimetabolite, anthracyclines, an aromatase inhibitor, mTOR, and many more. The drug resistance in breast cancer is rising, so reviewing how the challenges in breast cancer can be combated with drug repurposing. This paper provides the updated information on all the repurposed drugs candidates for breast cancer with the molecular mechanism responsible for their anti-tumor activity. Additionally, all the challenges that occur during the repurposing of the drugs are discussed.
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- 2022
44. CNT-Based Nano Medicine From Synthesis to Therapeutic Application
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Sirajudheen Anwar, Shoaib Anwar Ansari, Shabana Ansari, and Farhan Alshammari
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Materials science ,Nanomedicine ,Nanotechnology - Abstract
Carbon nanotubes (CNTs) are allotropes of carbon consisting of cylindrical tubes, made up of graphite with a diameter of several nm to a length of several mm. They had extraordinary structural, mechanical, and electronic properties due to their small size and mass, high mechanical resilience, and high electrical and thermal conductivity. Their large surface area made them applicable in pharmacy and medicine and adsorb or conjugate a broad variety of medical and diagnostic agents (drugs, genes, vaccines, antibodies, biosensors, etc.). They are often used to deliver drugs directly into the cells without going through the metabolic process of body. In addition to drug delivery and gene therapy, CNTs are also used for tissue regeneration, diagnostic biosensors, chiral drug enantiomer separation, drug extraction, and drug or pollutant analysis. CNTs have recently been discovered as effective antioxidants. The ADME and toxicity of different types of CNTs have also been documented here, as well as the prospects, advantages, and challenges of this promising bio-nano technology.
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- 2022
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45. The SARS-CoV-2 mutations versus vaccine effectiveness: New opportunities to new challenges
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Jonaid Ahmad Malik, Sakeel Ahmed, Aroosa Mir, Mrunal Shinde, Onur Bender, Farhan Alshammari, Mukhtar Ansari, and Sirajudheen Anwar
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COVID-19 Vaccines ,CNBG, China National Biotec Group ,Vaccine efficacy ,VOI, Variant of Interest ,RVZV, recombinant varicella-zoster vaccine ,Review ,Infectious and parasitic diseases ,RC109-216 ,GISAID, Global Initiative on Sharing All Influenza Data ,PHE, Public Health Emergency ,WIBP, Wuhan Institute of Biological Products ,Clinical trials ,Humans ,SAE, Serious adverse events ,NTD, N-terminal domain ,ADDE, Antibody dependent disease enhancement ,CDC, Centre for Disease Control and Prevention ,CMV, Cytomegalovirus ,WGS, whole-genome sequencing ,Pandemics ,ComputingMethodologies_COMPUTERGRAPHICS ,HPVV, human papillomavirus vaccine ,R.C.T., Randomised Clinical Trials ,Vaccines ,COVE, Coronavirus Efficacy ,SARS-CoV-2 ,EUAL, Emergency Use Assessment and Listing ,Public Health, Environmental and Occupational Health ,VOC, Variant of Concern ,RBD, receptor-binding domain ,COVID-19 ,VOHC, Variant of High Consequence ,General Medicine ,Variant strains ,VE, Vaccine effectiveness ,BIBP, Beijing Institute of Biological Products ,NERVTAG, New and Emerging Respiratory Virus Threats Advisory Group ,Infectious Diseases ,NIAID, National Institute of Allergy and Infectious Diseases ,HBV, hepatitis B virus vaccine ,Mutation ,AAs, Amino acids ,Public aspects of medicine ,RA1-1270 ,SIADP, Sharing All Influenza Data platform ,Mutations ,ACE2, Angiotensin-converting enzyme receptor 2 - Abstract
Graphical abstract, Background The SARS-CoV-2 coronavirus epidemic is hastening the discovery of the most efficient vaccines. The development of cost-effective vaccines seems to be the only solution to terminate this Pandemic. However, the vaccines’ effectiveness has been questioned due to recurrent mutations in the SARS-CoV-2 genome. Most of the mutations are associated with the spike protein, a vital target for several marketed vaccines. Many Countries were highly affected by the 2nd wave of the SARS-CoV-2, like the UK, India, Brazil, France. Experts are also alarming the further COVID-19 wave with the emergence of Omicron, which is highly affecting the South African populations. This review encompasses the detailed description of all vaccine candidates and COVID-19 mutants that will add value to design further studies to combat the COVID-19 Pandemic. Methods The information was generated using various search engines like google scholar, PubMed, clinicaltrial.gov.in, WHO database, ScienceDirect, and news portals by using keywords SARS-CoV-2 Mutants, COVID-19 Vaccines, Efficacy of SARS-CoV-2 Vaccines, COVID-19 waves. Results This review has highlighted the evolution of SARS-CoV2 variants and the vaccine efficacy. Currently, various vaccine candidates are also undergoing several phases of development. Their efficacy still needs to check for newly emerged variants. We have focused on the evolution, multiple mutants, waves of the SARS-CoV-2, and different marketed vaccines undergoing various clinical trials and the design of the trials to determine vaccine efficacy. Conclusion Various mutants of SARS-CoV-2 arrived, mainly concerned with the spike protein, a key component to design the vaccine candidates. Various vaccines are undergoing clinical trial and show impressive results, but their efficacy still needs to be checked in different SARS-CoV-2 mutants. We discussed all mutants of SARS-CoV-2 and the vaccine's efficacy against them. The safety concern of these vaccines is also discussed. It is important to understand how coronavirus gets mutated to design better new vaccines, providing long-term protection and neutralizing broad mutant variants. A proper study approach also needs to be considered while designing the vaccine efficacy trials, which further improved the study outcomes. Taking preventive measures to protect from the virus is also equally important, like vaccine development.
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- 2021
46. Buxus papillosa C.K. Schneid.: A comprehensive review on traditional uses, botany, phytochemistry, pharmacology, and toxicology
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Hammad Saleem, Umair Khurshid, Sirajudheen Anwar, Muhammad Imran Tousif, Mohamad Fawzi Mahomoodally, and Nafees Ahemad
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Bioengineering ,Agronomy and Crop Science ,Applied Microbiology and Biotechnology ,Food Science ,Biotechnology - Published
- 2022
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47. Phytochemical composition, biological propensities, and in-silico studies of Crateva adansonii DC.: A natural source of bioactive compounds
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Irfan Pervaiz, Muhammad Hasnat, Saeed Ahmad, Umair Khurshid, Hammad Saleem, Farhan Alshammari, Khaled Almansour, Adriano Mollica, Kannan R.R. Rengasamy, Syafiq Asnawi Zainal Abidin, and Sirajudheen Anwar
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Biochemistry ,Food Science - Published
- 2022
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48. Chemical Composition and Biological Activity of the Essential Oil Isolated from the Leaves of Achillea fragrantissima Growing Wild in Yemen
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Khaled Hussain, Nasser A. Awadh Ali, Iman Mansi, Sirajudheen Anwar, Ali Gamal Al-kaf, William N. Setzer, and Nizar M. Mhaidat
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Pharmacology ,law ,Drug Discovery ,Botany ,Achillea fragrantissima ,Biological activity ,Biology ,Chemical composition ,Essential oil ,law.invention - Published
- 2019
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49. Clinical Characteristics and Treatment Outcomes of Mild to Moderate COVID-19 Patients at Tertiary Care Hospital, Al Baha, Saudi Arabia: A Single Centre Study
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Mohammad Albanghali, Saleh Alghamdi, Mohammed Alzahrani, Bassant Barakat, Abdul Haseeb, Jonaid Ahmad Malik, Sakeel Ahmed, and Sirajudheen Anwar
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SARS-CoV-2 ,Public Health, Environmental and Occupational Health ,Saudi Arabia ,COVID-19 ,General Medicine ,Infectious and parasitic diseases ,RC109-216 ,COVID-19 Drug Treatment ,Tertiary Care Centers ,Infectious Diseases ,Treatment Outcome ,Antibiotics ,Humans ,Original Article ,Public aspects of medicine ,RA1-1270 ,Mild infection ,Pandemics ,Hydroxychloroquine ,Retrospective Studies - Abstract
Objective Since the severity of symptoms affects the treatment option for Coronavirus Disease 2019 (COVID-19) patients, the treatment pattern for mild to moderate non-ICU cases must be evaluated, particularly in the current scenario of mutation and variant strain for effective decision making. Methods The objective of retrospective analysis was to assess clinical and treatment outcomes in mild to moderate symptoms in non-ICU patients with COVID-19 who were admitted to major tertiary care hospitals in Al Baha, Saudi Arabia, between April and August 2020. Results A total of 811 people were admitted for COVID-19 treatment, age ranging from 14 to 66, diabetes mellitus (31%, n = 248) and hypertension (24%, n = 198) were the most common comorbid conditions. The hydroxychloroquine (HCQ) treated group (G1 n = 466) had an MD of 8 and an IQR of 5-13 for time in hospital with a 4.3% mortality rate, while the non-HCQ group (G2 n = 345) had an MD of 6 and an IQR of 3-11 for time in hospital with a 3.2% mortality rate. A combination of antiviral and antibiotic treatment was found to be effective, other most frequent intervention was analgesics 85.7%, anticoagulant 75%, minerals (Zinc 83% and Vit D3 82%). Conclusions The therapy and clinical outcomes from the past will be the guiding factor to treat the mutant strain infection in the future. Patients treated with HCQ had a higher mortality rate, whereas those who were given a non-HCQ combination had a greater clinical outcome profile. Data Availability Statement Data available on request due to ethical restrictions. The anonymized data presented in this study are available on request from the corresponding author. The data are not publicly available to maintain privacy and adhere to guidelines of the ethics protocol.
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- 2021
50. Clinical characteristics and treatment outcomes of mild to moderate COVID-19 patients in Saudi Arabia: A single centre study
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Mohammad A Albanghali, Mohammed Abdullah Alzahrani, Bassant M. Barakat, Abdul Haseeb, Saleh Alghamdi, and Sirajudheen Anwar
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Pediatrics ,medicine.medical_specialty ,Single centre ,Text mining ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Treatment outcome ,medicine ,business - Abstract
Background Since the severity of symptoms affects the treatment option for Coronavirus Disease 2019 (COVID-19) patients, the treatment pattern for mild to moderate non-ICU cases must be evaluated, particularly in the current scenario of mutation and variant strain for effective decision making. Objectives This retrospective study’s objectives were to assess clinical and treatment outcomes in mild to moderate non-ICU COVID-19 patients in Saudi Arabia. Methods Non-ICU patients with COVID-19 with mild to moderate symptoms who were admitted to major tertiary care hospitals in Al Baha, Saudi Arabia, between April and August 2019 were studied retrospectively for clinical outcomes. Results A total of 811 people were admitted for COVID-19 treatment, with age ranging from 14 to 66, diabetes mellitus (31 %, n = 248) and hypertension (24%, n = 198) were the most common comorbid conditions. The majority of the patients (77 %, n = 621) had reported symptoms for COVID -19 infection. The hydroxychloroquine (HCQ) treated group (G1 n = 466) had an MD of 8 and an IQR of 5-13 for time in hospital with a 4.3 % mortality rate, while the non-HCQ group (G2 n = 345) had an MD of 6 and an IQR of 3-11 for time in hospital with a 3.2 % mortality rate. The mortality rate among non-HCQ treated patients varied, but a combination of antiviral and antibiotic treatment was found to be effective, other most frequent intervention was analgesics 85.7 %, anticoagulant 75 %, minerals (Zinc 83 % and Vit D3 82 %). Conclusions The COVID 19 therapy and clinical outcomes from the past will be the guiding factor to treat the mutant strain infection in the future. Patients treated HCQ had a higher mortality rate, whereas those who were given a non-HCQ combination had a greater clinical outcome profile.
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- 2021
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