29 results on '"Singer MJ"'
Search Results
2. Coping Self-Efficacy Mediates the Association Between Child Abuse and ADHD in Adulthood.
- Author
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Singer MJ, Humphreys KL, and Lee SS
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- Adolescent, Adult, Adult Survivors of Child Abuse psychology, Child, Female, Humans, Male, Young Adult, Adaptation, Psychological physiology, Attention Deficit Disorder with Hyperactivity etiology, Child Abuse psychology, Self Efficacy
- Abstract
Objective: To investigate whether individual differences in coping self-efficacy mediated the association of child abuse and symptoms of ADHD in young adults., Method: Self-reported measures of coping self-efficacy, child abuse, and ADHD were obtained from 66 adults., Results: Adults who reported childhood physical or sexual abuse (prior to the age of 17) had significantly higher levels of ADHD than those who did not. Individual differences in coping self-efficacy fully mediated the association between child abuse and ADHD symptoms in adulthood, such that individuals who endorsed child abuse had lower coping self-efficacy, and coping self-efficacy negatively predicted ADHD symptoms., Discussion: The findings suggest a potential causal mechanism by which childhood physical and sexual abuse may result in ADHD symptoms later in life. Interventions that improve coping skills may be useful in preventing later ADHD symptoms among adults with a childhood history of physical and sexual abuse., (© The Author(s) 2012.)
- Published
- 2016
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3. Demonstrating the process of community innovation: the Indian Country Methamphetamine Initiative.
- Author
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Walker RD, Bigelow DA, LePak JH, and Singer MJ
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- Culture, Humans, Indians, North American, Amphetamine-Related Disorders prevention & control, Amphetamine-Related Disorders psychology, Amphetamine-Related Disorders therapy, Community Health Planning methods, Residence Characteristics
- Abstract
In 2007 the federal Department of Health and Human Services, Office for Minority Health, collaborating with other federal agencies, sponsored the Indian Country Methamphetamine Initiative (ICMI). ICMI was undertaken to create community-driven, culture-based best practices in methamphetamine prevention and treatment which could then be disseminated throughout Indian Country. The ICMI ultimately involved ten tribes and five national organizations. Each tribe established a coalition of community government, nongovernment agencies, and elements of civic society to develop a comprehensive assessment, plan, and then to implement the plan. Each tribal coalition planned a complex array of activities including treatment programs, public education and mobilization, law enforcement strategies, and other intervention strategies, each intervention described within a logic model. These interventions focused on logic modeling; coalitions; capacity development and service system optimization; law enforcement and justice; individual and family treatment; public information, awareness, and education; community mobilization; and a very popular ICMI strategy, cultural renaissance. It was concluded that worthwhile activities were conducted under ICMI sponsorship, but that the specific aim of demonstrating community-driven, culture-based innovations in a manner suitable for dissemination was achieved only to a limited extent. Based on this outcome together with similar experiences, recommendations for future initiatives are suggested.
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- 2011
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4. Nitrate and sediment fluxes from a California rangeland watershed.
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Lewis DJ, Singer MJ, Dahlgren RA, and Tate KW
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- California, Chemical Precipitation, Ecosystem, Rain, Rivers, Seasons, Time Factors, Water Movements, Environmental Monitoring, Geologic Sediments analysis, Nitrates analysis, Nitrogen analysis, Water Supply
- Abstract
Long-term water quality records for assessing natural variability, impact of management, and that guide regulatory processes to safeguard water resources are rare for California oak woodland rangelands. This study presents a 20-yr record (1981-2000) of nitrate-nitrogen (NO(3)-N) and suspended sediment export from a typical, grazed oak woodland watershed (103 ha) in the northern Sierra Nevada foothills of California. Mean annual precipitation over the 20-yr period was 734 mm yr(-1) (range 366-1205 mm yr(-1)). Mean annual stream flow was 353 mm y(-1) (range 87-848 mm yr(-1)). Average annual stream flow was 48.1 +/- 16% of precipitation. Mean annual NO(3)-N export was 1.6 kg ha(-1) yr(-1) (range 0.18-3.6 kg ha(-1) yr(-1)). Annual NO(3)-N export significantly (P < 0.05) increased with increasing annual stream flow and precipitation. Mean daily NO(3)-N export was 0.004 kg ha(-1) d(-1) (range 10(-5) to 0.55 kg ha(-1) d(-1)). Mean annual suspended sediment export was 198 kg ha(-1) yr(-1) (range 23-479 kg ha(-1) yr(-1)). There was a positive relationship (P < 0.05) between annual suspended sediment export, annual stream flow and precipitation. Mean daily suspended sediment export was 0.54 kg ha(-1) d(-1) (range 10(-4) to 155 kg ha(-1) d(-1)). Virtually no sediment was exported during the dry season. The large variation in daily and annual fluxes highlights the necessity of using long-term records to establish quantitative water quality targets for rangelands and demonstrates the difficulty of designing a water quality monitoring program for these ecosystems.
- Published
- 2006
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5. Biomechanical evaluation of a veterinary suture anchor in the canine cadaver pelvis and femur.
- Author
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Singer MJ, Pijanowski G, Wiley R, Johnson AL, and Siegel AM
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- Animals, Biomechanical Phenomena, Cadaver, Dogs surgery, Femoral Fractures surgery, Fracture Fixation, Intramedullary methods, Fractures, Bone surgery, Fractures, Bone veterinary, Pelvic Bones surgery, Dogs injuries, Femoral Fractures veterinary, Fracture Fixation, Intramedullary veterinary, Pelvic Bones injuries, Suture Techniques veterinary
- Abstract
A commercially available veterinary suture anchor was tested in the acetabula and femurs of canine cadavers. Size #2 suture anchor constructs were compared to a traditional screw and Teflon spiked washer constructs in a model of coxofemoral luxation repair. The screw/washer constructs failed at a higher maximum load than the #2 anchor constructs. In the acetabulum, significant differences in strength were also found in the position of the implant and in the direction of pull. The constructs in a more caudal position, and constructs pulled 90 degrees to the axis of insertion, failed at higher loads. The predominant mode of failure of the constructs was a suture failure. In the femur, size #5 suture anchors were used in a model of cranial cruciate ligament repair and collateral ligament repair. The anchor constructs failed predominantly by anchor pull-out in the distal femur. The constructs pulled 90 degrees to the axis of insertion were stronger than construcs pulled at 0 degrees to the axis of insertion. Varying the location of the implant in the femur did not affect the maximum load to failure.
- Published
- 2005
6. Expression pattern of mouse homolog of prostate-specific membrane antigen (FOLH1) in the transgenic adenocarcinoma of the mouse prostate model.
- Author
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Schmittgen TD, Zakrajsek BA, Hill RE, Liu Q, Reeves JJ, Axford PD, Singer MJ, and Reed MW
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- Adenocarcinoma genetics, Adenocarcinoma pathology, Animals, Carboxypeptidases genetics, Carboxypeptidases metabolism, Disease Models, Animal, Female, Gene Expression Regulation, Neoplastic, Glutamate Carboxypeptidase II, Male, Mice, Mice, Inbred C57BL, Mice, Transgenic, Prostatic Neoplasms genetics, Prostatic Neoplasms pathology, RNA, Neoplasm biosynthesis, RNA, Neoplasm genetics, Reverse Transcriptase Polymerase Chain Reaction, Adenocarcinoma immunology, Carboxypeptidases biosynthesis, Prostatic Neoplasms immunology
- Abstract
Background: Prostate specific membrane antigen (PSMA) is expressed on the plasma membrane of normal prostate and in primary and metastatic prostate cancer in humans. Recently, a mouse homolog of PSMA (FOLH1) was identified that shares an 85% sequence homology with human PSMA. The transgenic adenocarcinoma of the mouse prostate (TRAMP) model displays spontaneous tumor development with age and metastasizes to tissues similar to human prostate cancer. This study characterized the expression of Folh1 in the TRAMP model to determine if the TRAMP would be a useful model system to evaluate PSMA-directed targeting strategies., Methods: A sensitive, real-time quantitative PCR assay was developed to measure Folh1 cRNA copy number in various tissues of 30-32-week-old TRAMP+ and age-matched, nontransgenic controls (TRAMP-)., Results: Of the tissues studied, the highest expression of Folh1 was observed in the kidney and brain of both TRAMP+ and TRAMP- mice. Low levels of Folh1 cRNA (1-2 copies/ng total RNA) were detected in the tumor and lymph nodes of TRAMP+ mice and in the seminal vesicles and lung of the TRAMP+ and TRAMP- mice. The expression of Folh1 mRNA was sixfold higher in the prostate of 32-week-old TRAMP- mice compared to the tumor of 32-week-old TRAMP+ mice. The rank order of the Folh1 expression in the tissues studied was kidney > brain > prostate > tumor > lymph nodes > lung > seminal vesicles > liver. Folh1 mRNA was undetectable in the bone marrow of both TRAMP+ and TRAMP- mice. Folate hydrolase activity assayed in the kidney, brain, lung, and liver paralleled the expression of Folh1 mRNA in these tissues., Conclusions: We demonstrate that Folh1 is expressed at very high levels in some normal mouse tissues including the prostate gland and that the expression is not upregulated in the tumor of 32-week-old TRAMP+ mice., (Copyright 2003 Wiley-Liss, Inc.)
- Published
- 2003
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7. Soil compaction effects on water status of ponderosa pine assessed through 13C/12C composition.
- Author
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Gomez GA, Singer MJ, Powers RF, and Horwath WR
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- California, Carbon Isotopes, Pinus ponderosa, Plant Leaves physiology, Water, Pinus physiology, Soil
- Abstract
Soil compaction is a side effect of forest reestablishment practices resulting from use of heavy equipment and site preparation. Soil compaction often alters soil properties resulting in changes in plant-available water. The use of pressure chamber methods to assess plant water stress has two drawbacks: (1) the measurements are not integrative; and (2) the method is difficult to apply extensively to establish seasonal soil water status. We evaluated leaf carbon isotopic composition (delta13C) as a means of assessing effects of soil compaction on water status and growth of young ponderosa pine (Pinus ponderosa var. ponderosa Dougl. ex Laws) stands across a range of soil textures. Leaf delta13C in cellulose and whole foliar tissue were highly correlated. Leaf delta13C in both whole tissue and cellulose (holocellulose) was up to 1.0 per thousand lower in trees growing in non-compacted (NC) loam or clay soils than in compacted (SC) loam or clay soils. Soil compaction had the opposite effect on leaf delta13C in trees growing on sandy loam soil, indicating that compaction increased water availability in this soil type. Tree growth response to compaction also varied with soil texture, with no effect, a negative effect and a positive effect as a result of compaction of loam, clay and sandy loam soils, respectively. There was a significant correlation between 13C signature and tree growth along the range of soil textures. Leaf delta13C trends were correlated with midday stem water potentials. We conclude that leaf delta13C can be used to measure retrospective water status and to assess the impact of site preparation on tree growth. The advantage of the leaf delta13C approach is that it provides an integrative assessment of past water status in different aged leaves.
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- 2002
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8. Site-specific probing of oxidative reactivity and telomerase function using 7,8-dihydro-8-oxoguanine in telomeric DNA.
- Author
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Szalai VA, Singer MJ, and Thorp HH
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- Binding Sites, DNA chemistry, DNA genetics, Humans, Nucleic Acid Conformation, Oxidation-Reduction, Substrate Specificity, Telomere chemistry, Telomere genetics, DNA metabolism, Guanine analogs & derivatives, Guanine chemistry, Telomerase metabolism, Telomere metabolism
- Abstract
Telomeres at the ends of human chromosomes contain the repeating sequence 5'-d[(TTAGGG)(n)]-3'. Oxidative damage of guanine in DNAs that contain telomeric and nontelomeric sequence generates 7,8-dihydro-8-oxoguanine (8OG) preferentially in the telomeric segment, because GGG sequences are more reactive in duplex DNA. We have developed a general strategy for probing site-specific oxidation reactivity in diverse biological structures through substitution of minimally modified building blocks that are more reactive than the parent residue, but preserve the parent structure. In this study, 8OG was substituted for guanine at G(8), G(9), G(14), or G(15) in the human telomeric oligonucleotide 5'-d[AGGGTTAG(8)G(9)GTT AG(14)G(15)GTTAGGGTGT]-3'. Replacement of G by 8OG in telomeric DNA can affect the formation of intramolecular G quadruplexes, depending on the position of substitution. When 8OG was incorporated in the 5'-position of a GGG triplet, G quadruplex formation was observed; however, substitution of 8OG in the middle of a GGG triplet produced multiple structures. A clear correspondence between structure and reactivity was observed when oligonucleotides containing 8OG in the 5'-position of a GGG triplet were prepared in the quadruplex or duplex forms and interrogated by mediated electrocatalytic oxidation with Os(bpy)(3)(2+) (bpy = 2,2'-bipyridine). The rate constant for one-electron oxidation of a single 8OG in the 5'-position of a GGG triplet was (6.2 +/- 1.7) x 10(4) M(-1) s(-1) in the G quadruplex form. The rate constant was 2-fold lower for the same telomeric sequence in the duplex form ((3.0 +/- 1.3) x 10(4) M(-1) s(-1)). The position of 8OG in the GGG triplet affects telomerase activity and synthesis of telomeric repeat products. Telomerase activity was decreased significantly when 8OG was substituted in the 5'-position of the GGG triplet, but not when 8OG was substituted in the middle of the triplet. Thus, biological oxidation of G to 8OG in telomeres has the potential to modulate telomerase activity. Further, small molecules that inhibit telomerase by stabilizing telomeric G quadruplexes may not be as effective under oxidative stress.
- Published
- 2002
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9. Applications of local antimicrobial delivery systems in veterinary medicine.
- Author
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Streppa HK, Singer MJ, and Budsberg SC
- Subjects
- Absorbable Implants veterinary, Animals, Anti-Infective Agents, Local pharmacology, Drug Delivery Systems adverse effects, Drug Delivery Systems methods, Drug Implants, Equipment and Supplies, Infection Control, Infections drug therapy, Infusion Pumps, Implantable veterinary, Anti-Infective Agents, Local administration & dosage, Drug Delivery Systems veterinary, Infections veterinary
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- 2001
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10. Glucose tolerance and lipid profiles in dogs fed different fiber diets.
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Hoenig M, Laflamme PD, Klaser DA, Singer MJ, and Ferguson DC
- Subjects
- Animal Nutritional Physiological Phenomena, Animals, Dogs, Eating, Feces chemistry, Glucose Tolerance Test, Insulin blood, Male, Animal Feed analysis, Blood Glucose drug effects, Diet veterinary, Dietary Fiber pharmacology, Lipids blood
- Abstract
Increased dietary fiber is thought to have beneficial effects on health in humans. In diabetic dogs, a beneficial effect of fiber on glycemia has been suggested, while its effect on lipid profiles in dogs has not been described. The effects of different amounts and types of fiber on glucose tolerance and lipid concentrations were evaluated and compared with those of a standard maintenance ration in 30 healthy dogs. It was concluded that increased fiber intake had no influence on glucose in healthy dogs but it may have modulated lipid homeostasis.
- Published
- 2001
11. Quantitative reverse transcription-polymerase chain reaction to study mRNA decay: comparison of endpoint and real-time methods.
- Author
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Schmittgen TD, Zakrajsek BA, Mills AG, Gorn V, Singer MJ, and Reed MW
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- 3T3 Cells physiology, Animals, Cells, Cultured, Computer Systems, DNA Primers chemistry, Fluorescent Dyes, Genes, fos genetics, Genes, myc genetics, Globins analysis, Globins biosynthesis, Globins genetics, Humans, Linear Models, Mice, Sensitivity and Specificity, Time Factors, RNA, Messenger metabolism, Reverse Transcriptase Polymerase Chain Reaction
- Abstract
Four quantitative reverse transcription-PCR (RT-PCR) methods were compared to evaluate the time course of mRNA formation and decay. Mouse fibroblasts (NIH 3T3) transfected with the human beta-globin open reading frame/c-myc 3'-untranslated region chimeric gene under control of the c-fos promoter (fos-glo-myc) were used for serum-inducible transcription. The amount of fos-glo-myc mRNA, relative to beta-actin, was measured by quantitative, RT-PCR at various times following the addition of serum to serum-starved fibroblasts transfected with the chimeric gene. Both endpoint (band densitometry and probe hybridization) and real-time (SYBR green and TaqMan) PCR methods were used to assay the identical cDNA. The real-time methods produced a 4- to 5-log dynamic range of amplification, while the dynamic range of the endpoint assays was 1-log. The real-time and probe hybridization assays produced a comparable level of sensitivity that was considerably greater than band densitometry. The coefficient of variation from 22 replicate PCR reactions was 14.2 and 24.0% for the SYBR green and TaqMan detection, respectively, and 44.9 and 45.1% for the band densitometry and probe hybridization assays, respectively. The rank order for the values of r(2) obtained from the linear regression of the first-order mRNA decay plots was SYBR green > TaqMan > probe hybridization > band densitometry. Real-time PCR is more precise and displays a greater dynamic range than endpoint PCR. Among the real-time methods, SYBR green and TaqMan assays produced comparable dynamic range and sensitivity while SYBR green detection was more precise and produced a more linear decay plot than TaqMan detection., (Copyright 2000 Academic Press.)
- Published
- 2000
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12. Amplification of the human dihydrofolate reductase gene via double minutes is initiated by chromosome breaks.
- Author
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Singer MJ, Mesner LD, Friedman CL, Trask BJ, and Hamlin JL
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- Chromosome Deletion, Chromosome Painting, Chromosomes, Human ultrastructure, Drug Resistance genetics, HeLa Cells, Humans, In Situ Hybridization, Fluorescence, Methotrexate pharmacology, Chromosome Aberrations, Chromosomes, Human, Pair 5, DNA Damage, Gene Amplification, Tetrahydrofolate Dehydrogenase genetics
- Abstract
DNA sequence amplification is one of the most frequent manifestations of genomic instability in human tumors. We have shown previously that amplification of the dihydrofolate reductase (DHFR) gene in Chinese hamster cells is initiated by chromosome breaks, followed by bridge-breakage-fusion cycles that generate large intrachromosomal repeats; these are ultimately trimmed by an unknown process to smaller, more homogenous units manifested as homogenously staining chromosome regions (HSRs). However, in most human tumor cells, amplified DNA sequences are borne on unstable, extrachromosomal double minutes (DMs), which suggests the operation of a different amplification mechanism. In this study, we have isolated a large number of independent methotrexate-resistant human cell lines, all of which contained DHFR-bearing DMs. Surprisingly, all but one of these also had suffered partial or complete loss of one of the parental DHFR-bearing chromosomes. Cells in a few populations displayed what could be transient intermediates in the amplification process, including an initial HSR, its subsequent breakage, the appearance of DHFR-containing fragments, and, finally, DMs. Our studies suggest that HSRs and DMs both are initiated by chromosome breaks, but that cell types differ in how the extra sequences ultimately are processed and/or maintained.
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- 2000
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13. 3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures.
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Kutyavin IV, Afonina IA, Mills A, Gorn VV, Lukhtanov EA, Belousov ES, Singer MJ, Walburger DK, Lokhov SG, Gall AA, Dempcy R, Reed MW, Meyer RB, and Hedgpeth J
- Subjects
- Base Pair Mismatch, Base Sequence, DNA Primers, Hot Temperature, Nucleic Acid Hybridization, Oligodeoxyribonucleotides chemical synthesis, Oligodeoxyribonucleotides chemistry, Polymerase Chain Reaction, DNA Probes metabolism
- Abstract
DNA probes with conjugated minor groove binder (MGB) groups form extremely stable duplexes with single-stranded DNA targets, allowing shorter probes to be used for hybridization based assays. In this paper, sequence specificity of 3'-MGB probes was explored. In comparison with unmodified DNA, MGB probes had higher melting temperature (T(m)) and increased specificity, especially when a mismatch was in the MGB region of the duplex. To exploit these properties, fluorogenic MGB probes were prepared and investigated in the 5'-nuclease PCR assay (real-time PCR assay, TaqMan assay). A 12mer MGB probe had the same T(m)(65 degrees C) as a no-MGB 27mer probe. The fluorogenic MGB probes were more specific for single base mismatches and fluorescence quenching was more efficient, giving increased sensitivity. A/T rich duplexes were stabilized more than G/C rich duplexes, thereby leveling probe T(m)and simplifying design. In summary, MGB probes were more sequence specific than standard DNA probes, especially for single base mismatches at elevated hybridization temperatures.
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- 2000
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14. Targeted mutagenesis of DNA with alkylating RecA assisted oligonucleotides.
- Author
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Singer MJ, Podyminogin MA, Metcalf MA, Reed MW, Brown DA, Gamper HB, Meyer RB, and Wydro RM
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- Alkylation, Animals, Cell Line, Cloning, Molecular, DNA genetics, Escherichia coli genetics, Escherichia coli metabolism, Genes, Suppressor, Genetic Vectors, Plasmids, RNA, Transfer genetics, Sequence Analysis, DNA, Alkylating Agents metabolism, DNA metabolism, Mechlorethamine metabolism, Mutagenesis, Site-Directed, Oligodeoxyribonucleotides metabolism, Rec A Recombinases metabolism
- Abstract
Site-specific mutation was demonstrated in a shuttle vector system using nitrogen mustard-conjugated oligodeoxyribonucleotides (ODNs). Plasmid DNA was modified in vitro by ODNs containing all four DNA bases in the presence of Escherichia coli RecA protein. Up to 50% of plasmid molecules were alkylated in the targeted region of the supF gene and mutations resulted upon replication in mammalian cells. ODNs conjugated with either two chlorambucil moieties or a novel tetrafunctional mustard caused interstrand crosslinks in the target DNA and were more mutagenic than ODNs that caused only monoadducts.
- Published
- 1999
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15. Androgen receptor YAC transgenic mice carrying CAG 45 alleles show trinucleotide repeat instability.
- Author
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La Spada AR, Peterson KR, Meadows SA, McClain ME, Jeng G, Chmelar RS, Haugen HA, Chen K, Singer MJ, Moore D, Trask BJ, Fischbeck KH, Clegg CH, and McKnight GS
- Subjects
- Age Factors, Alleles, Animals, Chromosome Mapping, Chromosomes, Artificial, Yeast, Disease Models, Animal, Female, Gene Dosage, Gene Expression, Humans, Mice, Mice, Transgenic, Mosaicism genetics, Sequence Tagged Sites, Sex Factors, X Chromosome, Muscular Atrophy, Spinal genetics, Receptors, Androgen genetics, Trinucleotide Repeats
- Abstract
X-linked spinal and bulbar muscular atrophy (SBMA) is caused by a CAG repeat expansion in the first exon of the androgen receptor (AR) gene. Disease-associated alleles (37-66 CAGs) change in length when transmitted from parents to offspring, with a significantly greater tendency to shift size when inherited paternally. As transgenic mice carrying human AR cDNAs with 45 and 66 CAG repeats do not display repeat instability, we attempted to model trinucleotide repeat instability by generating transgenic mice with yeast artificial chromosomes (YACs) carrying AR CAG repeat expansions in their genomic context. Studies of independent lines of AR YAC transgenic mice with CAG 45 alleles reveal intergenerational instability at an overall rate of approximately 10%. We also find that the 45 CAG repeat tracts are significantly more unstable with maternal transmission and as the transmitting mother ages. Of all the CAG/CTG repeat transgenic mice produced to date the AR YAC CAG 45 mice are unstable with the smallest trinucleotide repeat mutations, suggesting that the length threshold for repeat instability in the mouse may be lowered by including the appropriate flanking human DNA sequences. By sequence-tagged site content analysis and long range mapping we determined that one unstable transgenic line has integrated an approximately 70 kb segment of the AR locus due to fragmentation of the AR YAC. Identification of the cis -acting elements that permit CAG tract instability and the trans -acting factors that modulate repeat instability in the AR YAC CAG 45 mice may provide insights into the molecular basis of trinucleotide repeat instability in humans.
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- 1998
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16. Regional differences in the compaction of chromatin in human G0/G1 interphase nuclei.
- Author
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Yokota H, Singer MJ, van den Engh GJ, and Trask BJ
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- Chromosome Banding, Chromosome Mapping, Chromosomes, Human, Pair 21 genetics, Chromosomes, Human, Pair 4 genetics, Chromosomes, Human, Pair 6 genetics, DNA Probes, Female, G1 Phase genetics, HeLa Cells, Humans, In Situ Hybridization, Fluorescence, Male, Resting Phase, Cell Cycle genetics, Tissue Fixation, X Chromosome genetics, Chromatin ultrastructure, Chromosomes, Human ultrastructure, Interphase genetics
- Abstract
The large-scale structure of chromatin corresponding to G- and R-bands in human G0/G1 interphase nuclei was compared. Fluorescence in situ hybridization (FISH) was used to measure the interphase distance between 42 pairs of probes separated by 0.1-1.5 Mbp. The probe pairs were derived from 21q22.2 and Xp21.3, G-band positive regions, and from 4p16.3, 6p21.3, and Xq28, R-band positive regions. Distributions of measured interphase distances in all regions approximated a Rayleigh distribution, suggesting that the chromatin follows a random-walk path over this range. A linear correlation of mean-square interphase distance and genomic separation, also indicative of random-walk folding, was observed in all regions. The slope of the correlation observed using probes from G-band regions was systematically lower than that from R-band regions. The difference in the slope between Xp21.3 and Xq28 was particularly striking and was observed in normal fibroblast cells, fixed alternatively with methanol and acetic acid or paraformaldehyde, and HeLa cells. These results demonstrate regional differences in large-scale chromosome structure during interphase, with the more openly configured chromatin corresponding to R-bands.
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- 1997
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17. DNA methylation associated with repeat-induced point mutation in Neurospora crassa.
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Singer MJ, Marcotte BA, and Selker EU
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- Alleles, Base Composition, Base Sequence, Genes, Fungal genetics, Glutamate Dehydrogenase (NADP+) genetics, Methylation, Molecular Sequence Data, Multigene Family, Neurospora crassa enzymology, Neurospora crassa growth & development, Sequence Analysis, DNA, Transformation, Genetic, DNA, Fungal metabolism, Neurospora crassa genetics, Point Mutation, Repetitive Sequences, Nucleic Acid physiology
- Abstract
Repeat-induced point mutation (RIP) is a process that efficiently detects DNA duplications prior to meiosis in Neurospora crassa and peppers them with G:C to A:T mutations. Cytosine methylation is typically associated with sequences affected by RIP, and methylated cytosines are not limited to CpG dinucleotides. We generated and characterized a collection of methylated and unmethylated amRIP alleles to investigate the connection(s) between DNA methylation and mutations by RIP. Alleles of am harboring 84 to 158 mutations in the 2.6-kb region that was duplicated were heavily methylated and triggered de novo methylation when reintroduced into vegetative N. crassa cells. Alleles containing 45 and 56 mutations were methylated in the strains originally isolated but did not become methylated when reintroduced into vegetative cells. This provides the first evidence for de novo methylation in the sexual cycle and for a maintenance methylation system in Neurospora cells. No methylation was detected in am alleles containing 8 and 21 mutations. All mutations in the eight primary alleles studied were either G to A or C to T, with respect to the coding strand of the am gene, suggesting that RIP results in only one type of mutation. We consider possibilities for how DNA methylation is triggered by some sequences altered by RIP.
- Published
- 1995
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18. Technetium-99m-nitroimidazole (BMS181321): a positive imaging agent for detecting myocardial ischemia.
- Author
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Shi CQ, Sinusas AJ, Dione DP, Singer MJ, Young LH, Heller EN, Rinker BD, Wackers FJ, and Zaret BL
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- Animals, Coronary Circulation, Dogs, Heart diagnostic imaging, Lactates metabolism, Lactic Acid, Myocardial Ischemia physiopathology, Oxygen Consumption, Tomography, Emission-Computed, Single-Photon, Myocardial Ischemia diagnostic imaging, Nitroimidazoles, Organotechnetium Compounds
- Abstract
Unlabelled: A new technetium-99m-labeled nitroimidazole (BMS181321) has been proposed for positive imaging of myocardial ischemia., Methods: An in vivo open-chest canine model of partial coronary occlusion and pacing-induced demand ischemia was used to correlate myocardial retention of BMS181321, following an intravenous injection at peak stress, with regional microsphere blood flow. Postmortem measurements of myocardial BMS181321 activity and flow were correlated with in vivo planar and ex vivo SPECT images. Myocardial and hepatic clearance of BMS181321 was derived from ROI analysis of serial planar images., Results: Anaerobic metabolism was documented in the ischemic region by selective venous and arterial sampling for lactate and oxygen consumption. Normalized myocardial BMS181321 activity (165% +/- 42% nonischemic) in the central ischemic region (flow < 0.3 ml/min/gm) was significantly greater than activity in normal regions (p < 0.05). Quantitative circumferential analysis of SPECT images revealed a comparable increase in myocardial BMS181321 activity in the ischemic region. Sixty minutes after injection of BMS181321, liver activity was 423% of ischemic myocardial activity., Conclusion: BMS181321 was preferentially retained in ischemic but viable canine myocardium and was inversely related to regional myocardial blood flow. Although enhanced retention of BMS181321 was detectable by ex vivo SPECT imaging, an unfavorable heart-to-liver ratio was observed with in vivo planar imaging which may limit its use in clinical myocardial imaging.
- Published
- 1995
19. Genetic and epigenetic inactivation of repetitive sequences in Neurospora crassa: RIP, DNA methylation, and quelling.
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Singer MJ and Selker EU
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- 5-Methylcytosine, Cytosine analogs & derivatives, Cytosine metabolism, DNA (Cytosine-5-)-Methyltransferases physiology, DNA, Fungal metabolism, Epistasis, Genetic, Fungal Proteins genetics, Fungal Proteins physiology, Genes, Fungal, Meiosis, Methylation, Multigene Family, Neurospora crassa physiology, Recombination, Genetic, Reproduction, Asexual, DNA, Fungal genetics, Gene Expression Regulation, Fungal, Neurospora crassa genetics, Point Mutation, Repetitive Sequences, Nucleic Acid
- Published
- 1995
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20. A targeted-replacement system for identification of signals for de novo methylation in Neurospora crassa.
- Author
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Miao VP, Singer MJ, Rountree MR, and Selker EU
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- Alleles, DNA, Fungal genetics, Gene Deletion, Genes, Fungal, Methylation, Mutation, Neurospora crassa genetics, Transformation, Genetic, DNA, Fungal metabolism, Neurospora crassa metabolism
- Abstract
Transformation of eukaryotic cells can be used to test potential signals for DNA methylation. This approach is not always reliable, however, because of chromosomal position effects and because integration of multiple and/or rearranged copies of transforming DNA can influence DNA methylation. We developed a robust system to evaluate the potential of DNA fragments to function as signals for de novo methylation in Neurospora crassa. The requirements of the system were (i) a location in the N. crassa genome that becomes methylated only in the presence of a bona fide methylation signal and (ii) an efficient gene replacement protocol. We report here that the am locus fulfills these requirements, and we demonstrate its utility with the identification of a 2.7-kb fragment from the psi 63 locus as a new portable signal for de novo methylation.
- Published
- 1994
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21. Dense nonsymmetrical DNA methylation resulting from repeat-induced point mutation in Neurospora.
- Author
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Selker EU, Fritz DY, and Singer MJ
- Subjects
- 5-Methylcytosine, Base Sequence, Blotting, Southern, Cytosine analysis, DNA Restriction Enzymes, DNA, Fungal chemistry, DNA-Binding Proteins genetics, Fungal Proteins genetics, Genes, Fungal, Methylation, Molecular Sequence Data, Neurospora crassa enzymology, Point Mutation, Cytosine analogs & derivatives, DNA, Fungal metabolism, Glutamate Dehydrogenase genetics, Neurospora crassa genetics
- Abstract
Cytosine methylation has been implicated in epigenetic control of gene expression in animals, plants, and fungi. It has been assumed that all methylation in eukaryotes is at symmetrical sequences such as CpG/GpC, because this can explain perpetuation of methylation states. Here the bisulfite genomic sequencing method was used to examine methylation in DNA from a Neurospora gene exposed to repeat-induced point mutation. 5-Methylcytosine was not limited to symmetrical sites and individual molecules showed different patterns and amounts of modification. The methylation extended beyond the mutated region and even beyond the edge of the duplicated segment.
- Published
- 1993
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22. Dissection of the signal for DNA methylation in the zeta-eta region of Neurospora.
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Selker EU, Richardson GA, Garrett-Engele PW, Singer MJ, and Miao V
- Subjects
- Base Sequence, DNA, Fungal genetics, Genome, Fungal, Methylation, Molecular Sequence Data, Neurospora crassa genetics, Point Mutation, Repetitive Sequences, Nucleic Acid, DNA, Fungal metabolism, Neurospora crassa metabolism
- Published
- 1993
- Full Text
- View/download PDF
23. Recurrence of repeat-induced point mutation (RIP) in Neurospora crassa.
- Author
-
Cambareri EB, Singer MJ, and Selker EU
- Subjects
- Biological Evolution, Cell Cycle, Cloning, Molecular, Crosses, Genetic, DNA Modification Methylases metabolism, Genetic Linkage genetics, Genetic Variation, Haplotypes, Meiosis genetics, Neurospora crassa cytology, Neurospora crassa growth & development, Nucleic Acid Heteroduplexes, Recombination, Genetic, Sequence Homology, Nucleic Acid, Multigene Family, Mutagenesis, Neurospora crassa genetics, Repetitive Sequences, Nucleic Acid
- Abstract
Duplicate DNA sequences in the genome of Neurospora crassa can be detected and mutated in the sexual phase of the life cycle by a process termed RIP (repeat-induced point mutation). RIP occurs in the haploid nuclei of fertilized, premeiotic cells before fusion of the parental nuclei. Both copies of duplications of gene-sized sequences are affected in the first generation at frequencies of approximately 50-100%. We investigated the extent to which sequences altered by RIP remain susceptible to this process in subsequent generations. Duplications continued to be sensitive to RIP, even after six generations. The fraction of progeny showing evidence of RIP decreased rapidly, however, apparently as a function of the extent of divergence of the duplicated sequences. Analysis of the stability of heteroduplexes of DNA altered by RIP and their native counterpart indicated that linked duplications diverged further than did unlinked duplications. DNA methylation, a common feature of sequences altered by RIP, did not seem to inhibit the process. A sequence that had become resistant to RIP was cloned and reintroduced into Neurospora in one or more copies to investigate the basis of the resistance. The altered sequence regained its methylation in vegetative cells, indicating that the methylation of sequences altered by RIP observed in vegetative cells is a consequence of the mutations. Duplication of the sequence restored its sensitivity to RIP suggesting that resistance to the process was due to loss of similarity between the duplicated sequences. Consistent with this, we found that the resistant sequence did not trigger RIP of the native homologous sequences of the host, even when no other partner was available. High frequency intrachromatid recombination, which is temporally associated with RIP, was more sensitive than RIP to alterations in the interacting sequences.
- Published
- 1991
- Full Text
- View/download PDF
24. [Autologous fat transplantation in rats].
- Author
-
Curi M, Singer MJ, Iaconelli LM, Naccache FA, Alonso N, and Vianna MR
- Subjects
- Animals, Cell Survival, Dermatologic Surgical Procedures, Rats, Skin pathology, Transplantation, Autologous, Adipose Tissue transplantation
- Abstract
The authors perform an experimental study in rats to demonstrate the integration of fat cells transplanted from the inguinal region to the dorsal region of the same animal. Histological studies were performed with the material removed and with the material injected. Final results show the transplanted fat cell integration after 360 days.
- Published
- 1991
25. [Musculoaponeurotic external oblique flap: a new option for the reconstruction of the abdominal wall. Anatomical study].
- Author
-
Curi MM, Singer MJ, Naccache FA, Iaconelli LM, and Alonso N
- Subjects
- Adult, Female, Humans, Male, Middle Aged, Abdominal Muscles surgery, Surgical Flaps methods
- Published
- 1990
26. The role of guanine nucleotides in regulation of adenylate cyclase activity.
- Author
-
Spiegel AM, Downs RW Jr, Levine MA, Singer MJ Jr, Krawietz W, Marx SJ, Woodard CJ, Reen SA, and Aurbach GD
- Subjects
- Adenosine Diphosphate Ribose metabolism, Adenylyl Cyclases genetics, Animals, Cholera Toxin pharmacology, Enzyme Activation, Fluorides pharmacology, Kinetics, Pseudohypoparathyroidism genetics, Rats, Reticulocytes enzymology, Turkeys, Adenylyl Cyclases metabolism, Erythrocyte Membrane enzymology, Erythrocytes enzymology, Guanine Nucleotides pharmacology, Guanosine Triphosphate analogs & derivatives, Guanosine Triphosphate metabolism, Guanylyl Imidodiphosphate pharmacology
- Published
- 1981
- Full Text
- View/download PDF
27. Brunch is Sunday treat at famous army hospital.
- Author
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Singer MJ
- Subjects
- District of Columbia, Humans, Food Service, Hospital
- Published
- 1966
28. Intravenous use of pituitary adrenocorticotropic hormone (ACTH); a report on its administration in twenty-five patients.
- Author
-
MANDEL W, SINGER MJ, GUDMUNDSON HR, MEISTER L, and MODERN FW
- Subjects
- Humans, Adrenocorticotropic Hormone, Injections, Intravenous, Pituitary Diseases, Pituitary Gland
- Published
- 1951
- Full Text
- View/download PDF
29. Intracranial calcification in the congenital rubella syndrome.
- Author
-
Rowen M, Singer MJ, and Moran ET
- Subjects
- Bone Diseases diagnostic imaging, Bone Diseases etiology, Brain Diseases diagnostic imaging, Brain Diseases etiology, Calcinosis diagnostic imaging, Calcinosis etiology, Ductus Arteriosus, Patent complications, Ductus Arteriosus, Patent diagnostic imaging, Female, Humans, Infant, Newborn, Pregnancy, Radiography, Thoracic, Rubella complications, Skull diagnostic imaging, Brain Diseases congenital, Calcinosis congenital, Cerebral Ventricles, Infant, Newborn, Diseases diagnostic imaging, Infant, Newborn, Diseases etiology, Pregnancy Complications, Infectious, Rubella congenital
- Published
- 1972
- Full Text
- View/download PDF
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