46 results on '"Simiand, Christophe"'
Search Results
2. Genetic diversity, distribution, and structure of Bemisia tabaci whitefly species in potential invasion and hybridization regions of East Africa
- Author
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Ally, Hadija M., primary, Hamss, Hajar El, additional, Simiand, Christophe, additional, Maruthi, M. N., additional, Colvin, John, additional, and Delatte, Helene, additional
- Published
- 2023
- Full Text
- View/download PDF
3. What has changed in the outbreaking populations of the severe crop pest whitefly species in cassava in two decades?
- Author
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Ally, Hadija M., Hamss, Hajar El, Simiand, Christophe, Maruthi, M. N., Colvin, John, Omongo, Christopher A., and Delatte, Helene
- Published
- 2019
- Full Text
- View/download PDF
4. Genetic diversity, distribution, and structure of Bemisia tabaci whitefly species in potential invasion and hybridization regions of East Africa
- Author
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Ally, Hadija, El Hamss, Hajar, Simiand, Christophe, Maruthi, M.N., Colvin, John, Delatte, Hélène, Ally, Hadija, El Hamss, Hajar, Simiand, Christophe, Maruthi, M.N., Colvin, John, and Delatte, Hélène
- Abstract
Outbreaks of whitefly, Bemisia tabaci species in East and Central Africa, have become increasingly prevalent during the previous 25 years and are responsible for driving the spread of plant-virus diseases, such as cassava mosaic disease and cassava brown steak disease. Epidemics of these diseases have expanded their ranges over the same period, spreading from Uganda into other sub-Saharan African countries. It was hypothesised that a highly abundant 'invader' population of B. tabaci was responsible for spreading these diseases from Uganda to neighbouring countries and potentially hybridising with the resident cassava B. tabaci populations. Here, we test this hypothesis by investigating the molecular identities of the highly abundant cassava B. tabaci populations from their supposed origin in Uganda, to the northern, central, eastern and coastal regions of Tanzania. Partial mitochondrial cytochrome oxidase I (mtCOI) barcoding sequences and nuclear microsatellite markers were used to analyse the population genetic diversity and structure of 2734 B. tabaci collected from both countries and in different agroecological zones. The results revealed that: (i) the putative SSA1 species is structured according to countries, so differ between them. (ii) Restricted gene flow occurred between SSA1–SG3 and both other SSA1 subgroups (SG1 and SG2), even in sympatry, demonstrating strong barriers to hybridization between those genotypes. (iii) Not only B. tabaci SSA1-(SG1 and SG2) was found in highly abundant (outbreak) numbers, but B. tabaci SSA1-SG3 and the Indian Ocean (IO) species were also recorded in high numbers in several sites in Tanzania. (iv) The SSA1-(SG1 and SG2) species was distributed in both countries, but in Tanzania, the B. tabaci IO and SSA1–SG3 species predominated. These data confirm that multiple, local Tanzanian B. tabaci species produce highly abundant populations, independent of the spread of the putative invasive B. tabaci SSA1-(SG1 and SG2) populations.
- Published
- 2023
5. Genetic diversity of whitefly species of the Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae) species complex, associated with vegetable crops in Côte d’Ivoire
- Author
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N’cho, Anthelme-Jocelin, primary, Seka, Koutoua, additional, Assiri, Kouamé Patrice, additional, Simiand, Christophe, additional, Otron, Daniel H., additional, Ochou, Germain, additional, Konan, Kouassi Arthur Jocelin, additional, Kouadio, Marie-France, additional, Fondio, Lassina, additional, Atta Diallo, Hortense, additional, Martin, Thibaud, additional, and Delatte, Hélène, additional
- Published
- 2022
- Full Text
- View/download PDF
6. Genetic diversity of whitefly species of the Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae) species complex, associated with vegetable crops in Côte d'Ivoire
- Author
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N'Cho, Anthelme Jocelin, Seka, Koutoua, Assiri, Kouamé Patrice, Simiand, Christophe, Otron, Daniel, Ochou, Germain O., Konan, Kouassi Arthur Jocelin, Kouadio, Marie-France N., Fondio, Lassina, Diallo, Hortense Atta, Martin, Thibaud, Delatte, Hélène, N'Cho, Anthelme Jocelin, Seka, Koutoua, Assiri, Kouamé Patrice, Simiand, Christophe, Otron, Daniel, Ochou, Germain O., Konan, Kouassi Arthur Jocelin, Kouadio, Marie-France N., Fondio, Lassina, Diallo, Hortense Atta, Martin, Thibaud, and Delatte, Hélène
- Abstract
Since several years, whiteflies of the species complex of Bemisia tabaci (Gennadius) are causing several damages on vegetable crops in Côte d'Ivoire. These sap-sucking insects are the main vector of many viruses on tomato and several species of this complex have developed resistances against insecticides. Nevertheless, there is very little information about whitefly species on vegetable crops in Côte d'Ivoire. Here, we investigated the species diversity and their genetic diversity and structuring on samples from vegetable crops in the major tomato production areas of Côte d'Ivoire. To assess this diversity, 535 whitefly samples from different localities and plant species were collected and analysed with nuclear (microsatellite) and mitochondrial (mtCOI) markers. In each site, and ecological data were recorded, including whiteflies abundance and plant species colonised by B. tabaci. The analysis of mtCOI sequences of whiteflies indicated the presence of four cryptic species on tomato and associated crops in Côte d'Ivoire. These were MED ASL, MED Q1, SSA 1 and SSA3. The MED ASL species dominated over all samples in the different regions and plant species. One haplotype of MED ASL out of the 15 identified predominated on most plant species and most sites. These results suggested that MED ASL is probably the main phytovirus vector in the Ivorian vegetable cropping areas. In contrast, only five haplotypes of MED Q1 were identified on vegetables but in the cotton-growing areas of the country. Its low prevalence, low nuclear and mitochondrial diversity might indicate a recent invasion of this species on vegetable crops in Côte d'Ivoire. The Bayesian nuclear analysis indicated the presence of hybrid genotypes between the two main species MED ASL and MED Q1, however in low prevalence (10%). All these results highlight the need to maintain whitefly populations monitoring for a more effective management in Côte d'Ivoire.
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- 2022
7. Estimating heritability in honeybees: Comparison of three major methods based on empirical and simulated datasets
- Author
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Jourdan‐Pineau, Hélène, primary, Antoine, Gaëlle, additional, Galataud, Julien, additional, Delatte, Hélène, additional, Simiand, Christophe, additional, and Clémencet, Johanna, additional
- Published
- 2021
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8. Genetic diversity of whitefly species of the Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae) species complex, associated with vegetable crops in Côte d'Ivoire.
- Author
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N'cho, Anthelme-Jocelin, Seka, Koutoua, Assiri, Kouamé Patrice, Simiand, Christophe, Otron, Daniel H., Ochou, Germain, Konan, Kouassi Arthur Jocelin, Kouadio, Marie-France, Fondio, Lassina, Atta Diallo, Hortense, Martin, Thibaud, and Delatte, Hélène
- Subjects
SWEETPOTATO whitefly ,GENETIC variation ,SPECIES diversity ,SPECIES ,HEMIPTERA ,VEGETABLES - Abstract
Since several years, whiteflies of the species complex of Bemisia tabaci (Gennadius) are causing several damages on vegetable crops in Côte d'Ivoire. These sap-sucking insects are the main vector of many viruses on tomato and several species of this complex have developed resistances against insecticides. Nevertheless, there is very little information about whitefly species on vegetable crops in Côte d'Ivoire. Here, we investigated the species diversity and their genetic diversity and structuring on samples from vegetable crops in the major tomato production areas of Côte d'Ivoire. To assess this diversity, 535 whitefly samples from different localities and plant species were collected and analysed with nuclear (microsatellite) and mitochondrial (mtCOI) markers. In each site, and ecological data were recorded, including whiteflies abundance and plant species colonised by B. tabaci. The analysis of mtCOI sequences of whiteflies indicated the presence of four cryptic species on tomato and associated crops in Côte d'Ivoire. These were MED ASL, MED Q1, SSA 1 and SSA3. The MED ASL species dominated over all samples in the different regions and plant species. One haplotype of MED ASL out of the 15 identified predominated on most plant species and most sites. These results suggested that MED ASL is probably the main phytovirus vector in the Ivorian vegetable cropping areas. In contrast, only five haplotypes of MED Q1 were identified on vegetables but in the cotton-growing areas of the country. Its low prevalence, low nuclear and mitochondrial diversity might indicate a recent invasion of this species on vegetable crops in Côte d'Ivoire. The Bayesian nuclear analysis indicated the presence of hybrid genotypes between the two main species MED ASL and MED Q1, however in low prevalence (10%). All these results highlight the need to maintain whitefly populations monitoring for a more effective management in Côte d'Ivoire. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
9. Estimating heritability in honeybees: Comparison of three major methods based on empirical and simulated datasets
- Author
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Jourdan-Pineau, Hélène, Antoine, Gaëlle, Galataud, Julien, Delatte, Hélène, Simiand, Christophe, Clémencet, Johanna, Jourdan-Pineau, Hélène, Antoine, Gaëlle, Galataud, Julien, Delatte, Hélène, Simiand, Christophe, and Clémencet, Johanna
- Abstract
The genetic contribution to phenotypic variation (namely the heritability) affects the response to selection. In honeybee, the haplodiploid sex determination does not allow the straightforward use of classical quantitative genetics methods to estimate heritability and genetic correlation. Nevertheless, specific methods have been developed for about 40 years. In particular, sibling analyses are frequently used with three main methods: an historical model using the average colony relatedness, a half-sib/full-sib model, and the more recent animal model. We compared those three methods using experimental and simulated datasets to see which performs the best. Our experimental dataset is composed of 10 colonies with a total sample of 853 workers. All individuals were genotyped to reconstitute the pedigree, and phenotypic traits were measured: labial palpus and wing cubital veins lengths. We also simulated phenotypic datasets with varying levels of heritability, common environment effect, and genetic correlation between traits. The simulation approach showed that the average colony relatedness was highly biased in presence of common environment effect whereas the half-sib/full-sib and the animal model gave reliable estimates of heritability. The animal model provided the greatest precision in genetic correlations. Using this latter method, we found that wing vein lengths had high heritabilities whereas the palpus length had lower heritability due to larger environmental variance and/or measurement error. Finally, significant genetic correlations among measured traits indicate that they do not evolve independently.
- Published
- 2021
10. When European meets African honeybees (Apis mellifera L.) in the tropics: Morphological changes related to genetics in Mauritius Island (South-West Indian Ocean)
- Author
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Galataud, Julien, primary, Delatte, Hélène, additional, Techer, Maéva Angélique, additional, Simiand, Christophe, additional, Sookar, Preeaduth, additional, Reynaud, Bernard, additional, and Clémencet, Johanna, additional
- Published
- 2020
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11. Estimating heritability in honeybees: comparison of three major methods based on empirical and simulated datasets.
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Pineau, H l ne Jourdan, primary, Antoine, Ga lle, additional, Galataud, Julien, additional, DELATTE, H l ne, additional, Simiand, Christophe, additional, and mencet, Johanna Cl, additional
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- 2020
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12. When European meets African honeybees (Apis mellifera L.) in the tropics: Morphological changes related to genetics in Mauritius Island
- Author
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Galataud, Julien, Delatte, Hélène, Techer, Maéva Angélique, Simiand, Christophe, Sookar, Preeaduth, Reynaud, Bernard, and Clémencet, Johanna
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Apis mellifera carnica ,Polymorphisme génétique ,Phénotype ,Évolution ,Anatomie animale ,L10 - Génétique et amélioration des animaux ,L40 - Anatomie et morphologie des animaux ,Apis mellifera mellifera ,Hybridation intraspécifique ,Apis mellifera ,Variation phénotypique ,Apis mellifera ligustica - Abstract
The previous genetic characterization of the honeybee population of Mauritius Island (Indian Ocean) revealed an ongoing process of hybridization between the first established African subspecies Apis mellifera unicolor and recently imported European subspecies (A. m. ligustica, A. m. carnica and A. m. mellifera). This context offers the rare opportunity to explore the influence of hybridization between African and European honeybees on phenotypic traits out of the case largely studied of the Africanized honeybee (hybrid between A. m. scutellata from South Africa and European subspecies). We thus conducted geometric morphometric analyses on forewings of 283 workers genetically characterized at 14 microsatellite loci to evaluate (1) if the morphological variability coincides well with the neutral genetic variability, (2) if hybrids exhibited rather parental, intermediate or transgressive traits, and (3) to test if fluctuating asymmetry (FA) of size and shape, as a measure of developmental stability, was elevated in hybrids (due to genetic stress) and/or European bees (due to unsuitable environment) compared to African bees. A strong concordance was found between morphological variability and neutral genetic variability, especially for wing shape, based on partial least-square analyses (PLS). However, on average, the morphology of hybrids was more similar to the African bees, potentially reflecting the dynamics and direction of introgression. Significant FA for wing size as well as wing shape was detected, suggesting the overall presence of stress during the development of the studied individuals. In contrast, the asymmetry levels do not differ according to the ancestry (African, European or hybrid) of the individuals. Therefore, if ongoing hybridization contributed to increasing the genetic and phenotypic diversity of the populations and influences its adaptive potential, developmental stressors could not be identified and their evolutionary consequences remain uncertain.
- Published
- 2020
13. Evolution of pesticide resistance in invasive versus indigenous agricultural pests in an insular tropical environment
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Taquet, Alizée, Jourdan, Hélène, Barrès, Benoit, Simiand, Christophe, Grondin, Martial, and Delatte, Hélène
- Abstract
Insular environments are among the most vulnerable ecosystems in the world, partly due to their small size and isolation. In La Reunion, an island in the southwest Indian Ocean, three whitefly species of the Bemisia tabaci (Gennadius) complex of cryptic species coexist: the indigenous species IO, and two exotic invasive species MEAM1 and Med, introduced in the late 1990s and in the early 2010s, respectively. B. tabaci is a major pest distributed worldwide, and a vector of plant viruses, responsible of serious damages on crops. The generalization of the use of pesticides has led to the emergence and rapid evolution of resistance in whitefly populations. In other countries, MEAM1 and Med have already demonstrated high resistance levels to all of the important classes of pesticides. Our objectives were to understand indigenous versus invasive whitefly species distribution in La Reunion, according to the different ecosystems; and how it could be linked to selection pressure of pesticide treatments. To assess species distribution, whiteflies were sampled at 59 collection sites, located all over the island in agroecosystems and natural areas. Molecular (kdr mutation, conferring Pyrethroid resistance) and laboratory bioassays (on three main classes of pesticides: Neonicotinoids, Pyridine azomethine derivatives and Pyrethroids) approaches were conducted on part of the sampled populations to assess pesticide resistance. The indigenous species IO was mainly sampled in natural areas and was found to be sensitive to the three classes of pesticides tested; in addition, no kdr mutation conferring Pyrethroid resistance was detected. The two exotic invasive species MEAM1 and Med were dominant in agrosystems. Most of the MEAM1 populations were found to be resistant to the three classes of pesticides tested, and kdr mutation was detected in both invasive species. Our results are in line with resistance cases reported worldwide in the literature, and suggest that whitefly species distribution in La Reunion could be driven by selection pressure of pesticide treatments.
- Published
- 2019
14. Insecticide resistance and fitness cost inBemisia tabaci(Hemiptera: Aleyrodidae) invasive and resident species in La Réunion Island
- Author
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Taquet, Alizée, primary, Delatte, Hélène, additional, Barrès, Benoit, additional, Simiand, Christophe, additional, Grondin, Martial, additional, and Jourdan‐Pineau, Hélène, additional
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- 2019
- Full Text
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15. What has changed in the outbreaking populations of the severe crop pest whitefly species in cassava in two decades?
- Author
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Hally, Hadija M., Hamss, Hajar El, Simiand, Christophe, Maruthi, M. N., Colvin, John, Omongo, Christopher A., Delatte, Helene, Hally, Hadija M., Hamss, Hajar El, Simiand, Christophe, Maruthi, M. N., Colvin, John, Omongo, Christopher A., and Delatte, Helene
- Abstract
High populations of African cassava whitefly (Bemisia tabaci) have been associated with epidemics of two viral diseases in Eastern Africa. We investigated population dynamics and genetic patterns by comparing whiteflies collected on cassava in 1997, during the first whitefly upsurges in Uganda, with collections made in 2017 from the same locations. Nuclear markers and mtCOI barcoding sequences were used on 662 samples. The composition of the SSA1 population changed significantly over the 20-year period with the SSA1-SG2 percentage increasing from 0.9 to 48.6%. SSA1-SG1 and SSA1-SG2 clearly interbreed, confirming that they are a single biological species called SSA1. The whitefly species composition changed: in 1997, SSA1, SSA2 and B. afer were present; in 2017, no SSA2 was found. These data and those of other publications do not support the ‘invader’ hypothesis. Our evidence shows that no new species or new population were found in 20 years, instead, the distribution of already present genetic clusters composing SSA1 species have changed over time and that this may be in response to several factors including the introduction of new cassava varieties or climate changes. The practical implications are that cassava genotypes possessing both whitefly and disease resistances are needed urgently.
- Published
- 2019
16. What has changed in the outbreaking populations of the severe crop pest whitefly species in cassava in two decades?
- Author
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Ally, Hadija, El Hamss, Hajar, Simiand, Christophe, Maruthi, M.N., Colvin, John, Omongo, Christopher A., Delatte, Hélène, Ally, Hadija, El Hamss, Hajar, Simiand, Christophe, Maruthi, M.N., Colvin, John, Omongo, Christopher A., and Delatte, Hélène
- Abstract
High populations of African cassava whitefly (Bemisia tabaci) have been associated with epidemics of two viral diseases in Eastern Africa. We investigated population dynamics and genetic patterns by comparing whiteflies collected on cassava in 1997, during the first whitefly upsurges in Uganda, with collections made in 2017 from the same locations. Nuclear markers and mtCOI barcoding sequences were used on 662 samples. The composition of the SSA1 population changed significantly over the 20-year period with the SSA1-SG2 percentage increasing from 0.9 to 48.6%. SSA1-SG1 and SSA1-SG2 clearly interbreed, confirming that they are a single biological species called SSA1. The whitefly species composition changed: in 1997, SSA1, SSA2 and B. afer were present; in 2017, no SSA2 was found. These data and those of other publications do not support the 'invader' hypothesis. Our evidence shows that no new species or new population were found in 20 years, instead, the distribution of already present genetic clusters composing SSA1 species have changed over time and that this may be in response to several factors including the introduction of new cassava varieties or climate changes. The practical implications are that cassava genotypes possessing both whitefly and disease resistances are needed urgently.
- Published
- 2019
17. Genetic diversity of Bemisia tabaci species colonizing cassava in Central African Republic characterized by analysis of cytochrome c oxidase subunit I
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Tocko-Marabena, Brice Kette, Silla, Semballa, Simiand, Christophe, Zinga, Innocent, Legg, James, Reynaud, Bernard, and Delatte, Helene
- Subjects
Phylogénie ,Heredity ,Manihot ,Manihot esculenta ,Bemisia tabaci ,Geographical Locations ,Espèce ,Database and Informatics Methods ,Génétique des populations ,Phylogeny ,Data Management ,food and beverages ,Phylogenetic Analysis ,Plants ,Phylogenetics ,Central African Republic ,Genetic Mapping ,Vecteur de maladie ,Begomovirus ,Sequence Analysis ,Research Article ,Crops, Agricultural ,Plante hôte ,Computer and Information Sciences ,Bioinformatics ,Cytochrome c ,Sequence Databases ,Research and Analysis Methods ,Electron Transport Complex IV ,Hemiptera ,Variation génétique ,Genetics ,Animals ,Evolutionary Systematics ,H20 - Maladies des plantes ,Taxonomy ,Plant Diseases ,Cassava ,Evolutionary Biology ,Organisms ,Biology and Life Sciences ,Genetic Variation ,Virus des végétaux ,H10 - Ravageurs des plantes ,Biological Databases ,Haplotypes ,People and Places ,Africa ,Shrubs ,Sequence Alignment - Abstract
After 2007, upsurges of whiteflies on cassava plants and high incidences of cassava diseases were observed in Central African Republic. This recent upsurge in the abundance of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) was directly linked to serious damage to cassava crops resulting from spread of whitefly-borne cassava mosaic geminiviruses (CMGs). There is currently very little information describing whitefly populations on cassava and associated crops in Central African Republic. The current study aimed to address this gap, and to determine whether the increasing damage associated with B. tabaci whiteflies was the consequence of a new invasion, or an upsurge of a local population. The molecular genetic identification and phylogenetic relationships of 898 B. tabaci adult individuals collected from representative locations (54) throughout CAR were determined based on their mitochondrial cytochrome oxidase I sequences (mtCOI). Field and ecological data were also collected from each site, including whitefly abundance, CMD incidence, host plants colonized by B. tabaci and agro-ecological zone. Phylogenetic analysis of the whitefly mtCOI sequences indicated that SSA1 (-SG1, -SG2), SSA3, MED, MEAM1 and Indian Ocean (IO) putative species occur in CAR. One specific haplotype of SSA1-SG1 (SSA1-SG1-P18F5) predominated on most cassava plants and at the majority of sites. This haplotype was identical to the SSA1-SG1 Mukono8-4 (KM377961) haplotype that was recorded from Uganda but that also occurs widely in CMD pandemic-affected areas of East Africa. These results suggest that the SSA1-SG1-P18F5 haplotype occurring in CAR represents a recent invasive population, and that it is the likely cause of the increased spread and severity of CMD in CAR. Furthermore, the high mtDNA sequence diversity observed for SSA1 and its broad presence on all sites and host plants sampled suggest that this genetic group was the dominant resident species even before the arrival of this new invasive haplotype.
- Published
- 2017
18. Insecticide resistance and fitness cost in Bemisia tabaci (Hemiptera: Aleyrodidae) invasive and resident species in La Réunion Island.
- Author
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Taquet, Alizée, Delatte, Hélène, Barrès, Benoit, Simiand, Christophe, Grondin, Martial, and Jourdan‐Pineau, Hélène
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SWEETPOTATO whitefly ,INSECTICIDE resistance ,INTRODUCED species ,ALEYRODIDAE ,HEMIPTERA ,ISLANDS ,NATURE reserves - Abstract
BACKGROUND: Global and intensive use of insecticides has led to the emergence and rapid evolution of resistance in the major pest Bemisia tabaci (Gennadius). In La Réunion, an island of the South West Indian Ocean, three whitefly species coexist, two of which are predominant, the indigenous Indian Ocean (IO) and the invasive Middle East Asia Minor 1 (MEAM1) species. To assess the resistance level of both of these species to acetamiprid and pymetrozine, whitefly populations were sampled at 15 collection sites located all over the island in agroecosystems and natural areas, and tested using leaf‐dip bioassays. We also investigated the potential cost of resistance to acetamiprid by measuring six fitness‐related traits for MEAM1 populations that displayed different resistance levels. RESULTS: IO was mainly found in natural areas and was susceptible to both acetamiprid and pymetrozine. MEAM1 populations displayed evidence of high resistance to pymetrozine, whereas resistance to acetamiprid was more variable. No fitness‐related costs were associated with this resistance in MEAM1 populations. CONCLUSION: This is the first assessment of the susceptibility to insecticides for B. tabaci IO species. For the time being, no resistance to the tested insecticides has evolved in this species despite (i) its presence in agroecosystems and their surroundings, and (ii) its close proximity to, and possible hybridization with, the MEAM1 species. In contrast, with continuous selection pressure of insecticide treatments and in the absence of fitness cost to resistance, the invasive exotic species MEAM1 will continue to threaten agriculture in La Réunion. © 2019 Society of Chemical Industry [ABSTRACT FROM AUTHOR]
- Published
- 2020
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19. First report of Tomato leaf curl New Delhi virus and the whitefly Bemisia tabaci Asia1 species on tomato in the Seychelles
- Author
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Scussel, Sarah, Claverie, Sohini, Hoareau, Murielle, Simiand, Christophe, Reynaud, Bernard, Moustache, Ravi, Lefeuvre, Pierre, Delatte, Hélène, Lett, Jean-Michel, Scussel, Sarah, Claverie, Sohini, Hoareau, Murielle, Simiand, Christophe, Reynaud, Bernard, Moustache, Ravi, Lefeuvre, Pierre, Delatte, Hélène, and Lett, Jean-Michel
- Published
- 2018
20. Population genetic analysis of Dacus ciliatus (Loew) throughout its native range in Africa and recently invaded areas
- Author
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Delatte, Hélène, Simiand, Christophe, De Meyer, Marc, Duyck, Pierre François, Vayssières, Jean-François, and Virgilio, Massimiliano
- Subjects
U30 - Méthodes de recherche ,H10 - Ravageurs des plantes - Abstract
Dacus ciliatus, the Ethiopian fruit fly, is a major oligophagous pest of cucurbit crops, that is abundant throughout and originates from the African continent. It has extended its range to the Indian Ocean islands becoming an invasive pest of major concern. Although the economic importance of this species is well documented, its large-scale pattern of genetic structuring is poorly known. Hence, the current quarantine methods and management plans still rely on general assumptions concerning its intraspecific variation. The aim of this work was to characterize the large-scale population structure of Dacus ciliatus, and its diversity within Africa (including Indian Ocean Islands) and Israel. Individuals of D. ciliatus were collected from 12 countries (n=1153) distributed in West Africa (Benin, Senegal, Mali, Burkina Faso), East and Southern Africa (Tanzania, South Africa, Mozambique), the Indian Ocean islands (Grande Comore, Mayotte, Mauritius and Réunion) and Israel. They were genotyped at 12 microsatellite loci specifically developed for this species. Genetic diversity was recorded such as genetic discontinuities among geographical regions and levels of population structuring through Bayesian clustering procedures. The optimal genetic structure found with Bayesian clustering procedures separated the whole dataset into three genetic clusters. The first cluster comprised all the mainland African populations, the second one the Mayotte populations and the last genetic cluster comprised the recently invaded Mascarene Islands (Réunion and Mauritius). Grande Comore Island had a mixed pattern between African origin and Mayotte genetic cluster. These results are further discussed regarding the ecological and geographical patterns and genetic differentiation of a population after an invasion in insular environments. (Texte intégral)
- Published
- 2016
21. Genetic diversity and differentiation among insular honey bee populations in the southwest Indian Ocean likely reflect old geographical isolation and modern introductions
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Techer, Maéva Angélique, primary, Clémencet, Johanna, additional, Simiand, Christophe, additional, Turpin, Patrick, additional, Garnery, Lionel, additional, Reynaud, Bernard, additional, and Delatte, Hélène, additional
- Published
- 2017
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22. Large-scale mitochondrial DNA analysis of native honey bee Apis mellifera populations reveals a new African subgroup private to the South West Indian Ocean islands
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Techer, Maéva Angélique, primary, Clémencet, Johanna, additional, Simiand, Christophe, additional, Preeaduth, Sookar, additional, Azali, Hamza Abdou, additional, Reynaud, Bernard, additional, and Hélène, Delatte, additional
- Published
- 2017
- Full Text
- View/download PDF
23. Genetic diversity and differentiation among insular honey bee populations in the southwest Indian Ocean likely reflect old geographical isolation and modern introductions
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Techer, Maéva Angélique, Clémencet, Johanna, Simiand, Christophe, Turpin, Patrick, Garnery, Lionel, Reynaud, Bernard, Delatte, Hélène, Techer, Maéva Angélique, Clémencet, Johanna, Simiand, Christophe, Turpin, Patrick, Garnery, Lionel, Reynaud, Bernard, and Delatte, Hélène
- Abstract
With globalization the Western honey bee has become a nearly cosmopolitan species, but it was originally restricted to the Old World. This renowned model of biodiversity has diverged into five evolutionary lineages and several geographic “subspecies.” If Apis mellifera unicolor is indubitably an African subspecies endemic to Madagascar, its relationship with honey bees from three archipelagos in the southwest Indian Ocean (SWIO) hotspot of biodiversity is misunderstood. We compared recent mtDNA diversity data to an original characterization of the nuclear diversity from honey bees in the Mascarenes and Comoros archipelagos, using 14 microsatellites, but also additional mtDNA tRNALeu-cox2 analysis. Our sampling offers the most comprehensive dataset for the SWIO populations with a total of 3,270 colonies from 10 islands compared with 855 samples from Madagascar, 113 from Africa, and 138 from Europe. Comprehensive mitochondrial screening confirmed that honey bees from La Réunion, Mauritius, and Comoros archipelagos are mainly of African origin (88.1% out of 2,746 colonies) and that coexistence with European lineages occurs only in the Mascarenes. PCA, Bayesian, and genetic differentiation analysis showed that African colonies are not significantly distinct on each island, but have diversified among islands and archipelagos. FST levels progressively decreased in significance from European and African continental populations, to SWIO insular and continental populations, and finally among islands from the same archipelago. Among African populations, Madagascar shared a nuclear background with and was most closely related to SWIO island populations (except Rodrigues). Only Mauritius Island presented clear cytoplasmic disequilibrium and genetic structure characteristic of an admixed population undergoing hybridization, in this case, between A. m. unicolor and A. m. ligustica, A. m. carnica and A. m. mellifera-like individuals. Finally, global genetic clustering analysis hel
- Published
- 2017
24. Occurrence of the Israel strain of Tomato yellow leaf curl virus and the whitefly Bemisia tabaci MEAM1 species in French Polynesia
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Wong, Maurice, Grandgirard, J., Hascoat, Jérémy, Hoareau, Murielle, Simiand, Christophe, Reynaud, Bernard, Lefeuvre, Pierre, Delatte, Hélène, Lett, Jean-Michel, Wong, Maurice, Grandgirard, J., Hascoat, Jérémy, Hoareau, Murielle, Simiand, Christophe, Reynaud, Bernard, Lefeuvre, Pierre, Delatte, Hélène, and Lett, Jean-Michel
- Published
- 2017
25. Large-scale mitochondrial DNA analysis of native honey bee Apis mellifera populations reveals a new African subgroup private to the South West Indian Ocean islands
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Techer, Maéva Angélique, Clémencet, Johanna, Simiand, Christophe, Preeaduth, Sookar, Hamza, Abdou Azali, Reynaud, Bernard, Delatte, Hélène, Techer, Maéva Angélique, Clémencet, Johanna, Simiand, Christophe, Preeaduth, Sookar, Hamza, Abdou Azali, Reynaud, Bernard, and Delatte, Hélène
- Abstract
Background: The South West Indian Ocean (SWIO) archipelagos and Madagascar constitute a hotspot of biodiversity with a high rate of endemism. In this area, the endemic subspecies A. m. unicolor has been described in Madagascar. It belongs to the African lineage, one of the four described evolutionary lineages in honey bees. Despite a long beekeeping tradition and several recorded European introductions, few studies have been carried out on the diversity and proportion of honey bee subspecies. In order to identify and define which evolutionary lineages and potential sub-lineages are present in the SWIO, the COI-COII intergenic region and the ND2 gene of the mtDNA were sequenced in honey bee colonies from three archipelagos. An extensive sampling (n = 1184 colonies) was done in the Mascarene (La Réunion, Mauritius, Rodrigues), Seychelles (Mahé, Praslin, La Digue) and Comoros (Grande Comore, Mohéli, Anjouan, Mayotte) archipelagos. Islands genetic diversity was compared to newly sampled populations from Madagascar, continental African and European populations. Results: African lineage haplotypes were found in all islands (except for Rodrigues). Madagascar, Comoros and Seychelles had 100% of A lineage, 95.5% in La Réunion and 56.1% in Mauritius. Among all African colonies detected in the SWIO, 98.1% (n = 633) of COI-COII haplotypes described the presence of the subspecies A. M. unicolor. Both genetic markers revealed i) a new private AI mitochondrial group shared by the SWIO archipelagos and Madagascar distant from continental populations; ii) the private African haplotypes for each island suggested diversity radiation in the archipelagos; iii) the detection of the Comoros archipelago as a possible contact area between insular and continental African populations. The exotic European C and M lineages were only detected in the Mascarene archipelago, but striking differences of proportion were observed among islands. Merely 4.6% of European colonies were found in La Réunion
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- 2017
26. Genetic diversity of Bemisia tabaci species colonizing cassava in Central African Republic characterized by analysis of cytochrome c oxidase subunit I
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Tocko Marabena, Brice Kette, Silla, Semballa, Simiand, Christophe, Zinga, Innocent, Legg, James, Reynaud, Bernard, Delatte, Hélène, Tocko Marabena, Brice Kette, Silla, Semballa, Simiand, Christophe, Zinga, Innocent, Legg, James, Reynaud, Bernard, and Delatte, Hélène
- Abstract
After 2007, upsurges of whiteflies on cassava plants and high incidences of cassava diseases were observed in Central African Republic. This recent upsurge in the abundance of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) was directly linked to serious damage to cassava crops resulting from spread of whitefly-borne cassava mosaic geminiviruses (CMGs). There is currently very little information describing whitefly populations on cassava and associated crops in Central African Republic. The current study aimed to address this gap, and to determine whether the increasing damage associated with B. tabaci whiteflies was the consequence of a new invasion, or an upsurge of a local population. The molecular genetic identification and phylogenetic relationships of 898 B. tabaci adult individuals collected from representative locations (54) throughout CAR were determined based on their mitochondrial cytochrome oxidase I sequences (mtCOI). Field and ecological data were also collected from each site, including whitefly abundance, CMD incidence, host plants colonized by B. tabaci and agro-ecological zone. Phylogenetic analysis of the whitefly mtCOI sequences indicated that SSA1 (-SG1, -SG2), SSA3, MED, MEAM1 and Indian Ocean (IO) putative species occur in CAR. One specific haplotype of SSA1-SG1 (SSA1-SG1-P18F5) predominated on most cassava plants and at the majority of sites. This haplotype was identical to the SSA1-SG1 Mukono8-4 (KM377961) haplotype that was recorded from Uganda but that also occurs widely in CMD pandemic-affected areas of East Africa. These results suggest that the SSA1-SG1-P18F5 haplotype occurring in CAR represents a recent invasive population, and that it is the likely cause of the increased spread and severity of CMD in CAR. Furthermore, the high mtDNA sequence diversity observed for SSA1 and its broad presence on all sites and host plants sampled suggest that this genetic group was the dominant resident species even before the arrival of this new i
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- 2017
27. Unraveling the mysteries of honeybee in the Mascarene Islands
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Techer, Maeva A., Clemencet, Johanna, Simiand, Christophe, Turpin, Patrick, Reynaud, Bernard, and Delatte, Helene
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Island Biology of Social Insects - Published
- 2014
28. Population structure and cryptic genetic variation in the mango fruit fly, Ceratitis cosyra (Diptera, Tephritidae)
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Virgilio, Massimiliano, Delatte, Hélène, Nzogela, Yasinta Beda, Simiand, Christophe, Quilici, Serge, De Meyer, Marc, Mwatawala, Maulid W., Virgilio, Massimiliano, Delatte, Hélène, Nzogela, Yasinta Beda, Simiand, Christophe, Quilici, Serge, De Meyer, Marc, and Mwatawala, Maulid W.
- Abstract
The fruit fly Ceratitis cosyra is an important agricultural pest negatively affecting the mango crop production throughout Africa and also feeding on a variety of other wild and cultivated hosts. The occurrence of deeply divergent haplotypes, as well as extensive morphological variability, previously suggested possible cryptic speciation within C. cosyra. Here we provide the first large-scale characterisation of the population structure of C. cosyra with the main objective of verifying cryptic genetic variation. A total of 348 specimens from 13 populations were genotyped at 16 polymorphic microsatellite loci. Hardy-Weinberg equilibrium (HWE) deviations were observed in 40.4% of locus-population combinations and suggested the occurrence of genetic substructuring within populations. Discriminant Analysis of Principal Components (DAPC) showed genetic divergence between the vast majority of vouchers from Burundi and Tanzania (plus a few outliers from other African countries) and all other specimens sampled. Individual Bayesian assignments confirmed the existence of two main genotypic groups also occurring in sympatry. These data provided further support to the hypothesis that C. cosyra might include cryptic species. However, additional integrative taxonomy, possibly combining morphological, ecological and physiological approaches, is required to provide the necessary experimental support to this model.
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- 2015
29. Population structure and cryptic genetic variation in the mango fruit fly, Ceratitis cosyra (Diptera, Tephritidae)
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Virgilio, Massimiliano, primary, Delatte, Hélène, additional, Nzogela, Yasinta Beda, additional, Simiand, Christophe, additional, Quilici, Serge, additional, De Meyer, Marc, additional, and Mwatawala, Maulid, additional
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- 2015
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30. Genetic diversity of the honeybee (Apis mellifera L.) populations in the Seychelles archipelago
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Techer, Maéva A., primary, Clémencet, Johanna, additional, Simiand, Christophe, additional, Portlouis, Gilbert, additional, Reynaud, Bernard, additional, and Delatte, Hélène, additional
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- 2015
- Full Text
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31. Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2009-31 January 2010
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Anderson, Cynthia M., Aparicio, Gallego J., Atangana, Alain R., Beaulieu, Jean, Bruford, Michael W., Cain, Forest, Campos, T., Cariani, A., Carvalho, M.A., Chen, Nan, Chen, P.P., Clamens, Anne-Laure, Clark, Ann M., Coeur D'Acier, A., Connolly, Paul, Cordero-Rivera, Adolfo, Coughlan, James P., Cross, Thomas S., DAVID, Bruno, De Bruyn, Colin, De Meyer, M., De Ridder, Chantal, Delatte, Hélène, Dettori, M.T., Downer, S.J., Dubreuil, Christine, Evans, K.J., Fan, Bin, Ferrara, G., Gagné, André, Gaillard, Maria, Gigliarelli, L., Giovinazzi, J., Gomez, D.R., Grünwald, N.J., Hansson, Bengt, Huotari, T., Jank, L., Jousselin, Emmanuelle, Jungmann, L., Kaczmarek, M.E., Khasa, Damase P., Kneebone, Jeff, Korpelainen, H., Kostamo, K., Lanfaloni, L., Lin, Haoran, Liu, Xiaochun, Lucentini, L., Maes, G.E., Mahaffee, W.F., Meng, Zining, Micali, S., Milano, I., Mok, H.F., Morin, L., Neill, T.M., Newton, Craig H., Ostrow, D. Gigi, Palomba, A., Panara, F., Puletti, M.E., Quarta, R., Quilici, Serge, Ramos, A.K.B., Rigaud, Thierry, Risterucci, Ange Marie, Salomon, Matthew P., Sánchez-Guillén, Rosa A., Sarver, Shane K., Sequeira, A.S., Sforça, D.A., Simiand, Christophe, Smith, Brian, Sousa, A.C.B., Souza, A.P., Stepien, C.C., Stuckert, A.J., Sulikowski, James, Tayeh, A., Tinti, F., Tsang, Paul C.W., Van Houdt, J.K.J., Vendramin, E., Verde, I., Virgilio, M., Wang, Huan L., Wang, Le, Wattier, Rémi A., Wellenreuther, Maren, Xie, Cong X., Zane, L., Zhang, Xiu J., Zhang, Yong, Zhuang, Zhimeng, Zucchi, M.I., Center for the Conservation of Biological Resources, Black Hills State University, Universitat Politècnica de València (UPV), Centre d'étude de la forêt (CEF), Université de Sherbrooke (UdeS)-Université Laval [Québec] (ULaval)-McGill University = Université McGill [Montréal, Canada]-Université du Québec à Chicoutimi (UQAC)-Université de Montréal (UdeM)-Université Téluq (TELUQ)-Université du Québec en Abitibi-Témiscamingue (UQAT)-Université du Québec à Rimouski (UQAR)-Concordia University [Montreal]-Université du Québec à Montréal = University of Québec in Montréal (UQAM)-Université du Québec en Outaouais (UQO), Natural Resources Canada (NRCan), School of Biosciences [Cardiff], Cardiff University, Centro de Biologia Molecular e Engenharia Genética (CBMEG), Universidade Estadual de Campinas (UNICAMP), Department of Experimental Evolutionary Biology, Alma Mater Studiorum Università di Bologna [Bologna] (UNIBO), Empresa Brasileira de Pesquisa Agropecuária (Embrapa), Ministério da Agricultura, Pecuária e Abastecimento [Brasil] (MAPA), Governo do Brasil-Governo do Brasil, Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, ministry of education-Huazhong Agricultural University, Department of Biological Sciences [Wellesley], Wellesley College, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Interdisciplinary Center for Biotechnology Research, University of Florida [Gainesville] (UF), Marine Institute, Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, Department of Zoology, Ecology and Plant Science, University College Cork (UCC), Biogéosciences [UMR 6282] [Dijon] (BGS), Centre National de la Recherche Scientifique (CNRS)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Laboratoire de Biologie marine, Université libre de Bruxelles (ULB), Royal Museum for Central Africa [Tervuren] (RMCA), Peuplements végétaux et bioagresseurs en milieu tropical (UMR PVBMT), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de la Recherche Agronomique (INRA)-Université de La Réunion (UR), Centro di Ricerca per la Frutticoltura, CRA, Tasmanian Institute of Agricultural Research, University of Tasmania [Hobart, Australia] (UTAS), State Key Laboratory of Biocontrol, Sun Yat-Sen University [Guangzhou] (SYSU), Dipartimento di Biologia Cellulare e Ambientale, Università degli Studi di Perugia (UNIPG), CSIRO Entomology [Canberra], CSIRO Entomology, Horticultural Crops Research Laboratory, USDA-ARS : Agricultural Research Service, Department of Animal Ecology, Lund University [Lund], Department of Applied Biology, Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire (UNH), Finnish Environment Institute (SYKE), Laboratory of Animal Diversity and Systematics, Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Vizon SciTecInc., Department of Biology [Gainesville] (UF|Biology), Polymorphismes d'intérêt agronomique (UMR PIA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA), Departamento de Biologia Vegetal (DBV), Marine Science Center, University of New England (UNE), Laboratory for Cytogenetics and Genome Research, Royal Belgian Institute of Natural Sciences (RBINS), Department of Biology, Universita degli Studi di Padova, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Pólo Apta Centro Sul, CYNTHIA M. ANDERSON, GALLEGO J. APARICIO, ALAIN R. ATANGANA, JEAN BEAULIEU, M.W. BRUFORD, FORREST CAIN, T. CAMPOS, A. CARIANI, M.A. CARVALHO, NAN CHEN, P.P. CHEN, A.-L. CLAMENS, ANN M. CLARK, A. COEUR D’ACIER, PAUL CONNOLLY, ADOLFO CORDERO-RIVERA, JAMES P. COUGHLAN, THOMAS S. CROSS, BRUNO DAVID, COLIN DE BRUYN, M. DE MEYER, CHANTAL DE RIDDER, H. DELATTE, M.T. DETTORI, S.J. DOWNER, CHRISTINE DUBREUIL, K.J. EVANS, BIN FAN, G. FERRARA, ANDRÉ GAGNÉ, MARIA GAILLARD, L. GIGLIARELLI, J. GIOVINAZZI, D.R. GOMEZ, N.J. GRÜNWALD, BENGT HANSSON, T. HUOTARI, L. JANK, E. JOUSSELIN, L. JUNGMANN, M.E. KACZMAREK, DAMASE P. KHASA, JEFF KNEEBONE, H. KORPELAINEN, K. KOSTAMO, L. LANFALONI, HAORAN LIN, XIAOCHUN LIU, L. LUCENTINI, G.E. MAES, W.F. MAHAFFEE, ZINING MENG, S. MICALI, I. MILANO, H.F. MOK, L. MORIN, T.M. NEILL, CRAIG H. NEWTON, D. GIGI OSTROW, A. PALOMBA, F. PANARA, M.E. PULETTI, R. QUARTA, S. QUILICI, A.K.B. RAMOS, THIERRY RIGAUD, A.M. RISTERUCCI, MATTHEW P. SALOMON, ROSA A. SÁNCHEZ-GUILLÉN, SHANE K. SARVER, A.S. SEQUEIRA, D.A. SFORÇA, C. SIMIAND, BRIAN SMITH, A.C.B. SOUSA, A.P. SOUZA, C.C. STEPIEN, A.J. STUCKERT, JAMES SULIKOWSKI, A. TAYEH, F. TINTI, PAUL C.W. TSANG, J.K.J. VAN HOUDT, E. VENDRAMIN, I. VERDE, M. VIRGILIO, HUAN L. WANG, LE WANG, RÉMI A. WATTIER, MAREN WELLENREUTHER, CONG X. XIE, L. ZANE, XIU J. ZHANG, YONG ZHANG, ZHIMENG ZHUANG, M.I. ZUCCHI, Universidad Politecnica de Valencia, Universidad Politécnica de Valencia, Université de Sherbrooke [Sherbrooke]-Université du Québec à Montréal (UQAM)-Université du Québec à Chicoutimi (UQAC)-Université Laval-Université Téluq (TELUQ)-Université de Montréal (UdeM)-Université du Québec en Outaouais (UQO)-Concordia University [Montreal]-Université McGill -Université du Québec en Abitibi-Témiscamingue (UQAT)-Université du Québec à Rimouski (UQAR), Università di Bologna [Bologna] (UNIBO), Empresa Brasileira de Pesquisa Agropecuária, University of Florida [Gainesville], Universidate de Vigo, Université Libre de Bruxelles [Bruxelles] (ULB), University of Tasmania (UTAS), Sun Yat-Sen University (SYSU), Centre d'étude de la forêt ( CEF ), Université Laval, Natural Resources Canada, Canadian Forest Service - CFS (CANADA)-Laurentian Forestry Centre, Centro de Biologia Molecular e Engenharia Genética ( CBMEG ), Universidade Estadual de Campinas ( UNICAMP ), Università di Bologna [Bologna] ( UNIBO ), Empresa Brasileira de Pesquisa Agropecuária ( Embrapa ), Centre de Biologie pour la Gestion des Populations ( CBGP ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -Université de Montpellier ( UM ) -Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), University College Cork ( UCC ), Biogéosciences [Dijon] ( BGS ), Université de Bourgogne ( UB ) -AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Centre National de la Recherche Scientifique ( CNRS ), Université Libre de Bruxelles [Bruxelles] ( ULB ), Royal Museum for Central Africa, UMR Peuplements végétaux et bioagresseurs en milieu tropical ( UMR PVBMT - Université de La Réunion ), Université de la Réunion ( UR ), University of Tasmania, Sun Yat-Sen University, Università degli Studi di Perugia ( UNIPG ), USDA-ARS, Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire ( UNH ), The Finnish Environment Institute, Katholieke Universiteit Leuven ( KU Leuven ), Polymorphismes d'intérêt agronomique ( PIA ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Institut National de la Recherche Agronomique ( INRA ), Departamento de Biologia Vegetal ( DBV ), University of New England ( UNE ), Royal Belgian Institute of Natural Sciences ( RBINS ), and Universita degli Studi di Padova = University of Padua = Université de Padoue
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0106 biological sciences ,microsatellite ,Population genetics ,Conservation Genetic ,Allanblackia ,Atlantic bluefin tuna ,computer.software_genre ,010603 evolutionary biology ,01 natural sciences ,Pistacia terebinthus ,microsatellites ,F30 - Génétique et amélioration des plantes ,03 medical and health sciences ,Botany ,Genetics ,Bactrocera ,EST ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0303 health sciences ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Database ,biology ,Pistacia ,Thunnu ,Animal ,Ceratitis rosa ,Ceratitis capitata ,L10 - Génétique et amélioration des animaux ,biology.organism_classification ,Ischnura ,Allanblackia floribunda ,Fish ,Genetic markers ,Plante ,GENETIQUE DES POPULATIONS ,[ SDV.GEN ] Life Sciences [q-bio]/Genetics ,computer ,ECOLOGIE ,Biotechnology - Abstract
4 pages; International audience; This article documents the addition of 220 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Allanblackia floribunda, Amblyraja radiata, Bactrocera cucurbitae, Brachycaudus helichrysi, Calopogonium mucunoides, Dissodactylus primitivus, Elodea canadensis, Ephydatia fluviatilis, Galapaganus howdenae howdenae, Hoplostethus atlanticus, Ischnura elegans, Larimichthys polyactis, Opheodrys vernalis, Pelteobagrus fulvidraco, Phragmidium violaceum, Pistacia vera, and Thunnus thynnus. These loci were cross-tested on the following species: Allanblackia gabonensis, Allanblackia stanerana, Neoceratitis cyanescens, Dacus ciliatus, Dacus demmerezi, Bactrocera zonata, Ceratitis capitata, Ceratitis rosa, Ceratits catoirii, Dacus punctatifrons, Ephydatia mülleri, Spongilla lacustris, Geodia cydonium, Axinella sp., Ischnura graellsii, Ischnura ramburii, Ischnura pumilio, Pistacia integerrima and Pistacia terebinthus.
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- 2010
- Full Text
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32. Population genetics of two fruits flies damaging cucurbits on la Réunion :Bactrocera cucurbitae and Dacus ciliatus
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Delatte, Hélène, Jacquard, Cathy, Simiand, Christophe, Deguine, Jean-Philippe, and Quilici, Serge
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Dacus ,Bactrocera cucurbitae ,Cucurbitaceae ,H10 - Ravageurs des plantes - Abstract
Bactrocera cucurbitae# and #Dacus ciliates# are two fruit fly species damaging cucurbit crops. Of Asiatic origin, #B. cucurbitae# has become an invasive pest in many countries especially on the African continent. Conversely, #D. ciliates#, of African origine, expanded its distribution area during the last years and is now becoming a pest in different Asiatic countries. Both species rank among invasive pests and have been introduced on La Réunion, a French island in the South-Western Indian Ocean, over the last 50 years. They now damage most cucurbits cultivated in the island and cause important yield losses. La Reunion is a subtropical island, with high altitudinal gradient (up to 3000 m) and two seasons (hot and rainy summer, milder and drier winter). Nevertheless, the two species are found in most areas, regardless of season and altitude. However, they show some altitudinal preferences: #B. cucurbitae# is more abundant in the lowlands and #D. ciliates# at medium altitudes. The aim of this work was to characterize the population structure of #B. cucurbitae# and #D. ciliates#, test host races and seasonal or altitude effects.
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- 2010
33. Performance of augmentorium as a sanitation technique against fruit flies (Diptera: tephritidae) in Reunion Island
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Deguine, Jean-Philippe, Atiama-Nurbel, Toulassi, Douraguia Quessary, Elisabeth, Jacquard, Cathy, Simiand, Christophe, Delatte, Hélène, and Quilici, Serge
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Tephritidae ,Parasitoïde ,H10 - Ravageurs des plantes - Abstract
Background. Tephritid fruit flies cause severe damage to fruit and vegetable crops in Reunion Island. Instead of the curative approach to reduce existing populations, the first step proposed for their management is sanitation. This method is based on an original technique firstly developed by USDA in Hawaii utilizing a tent-like structure called an "augmentorium" which aims to sequester adult flies emerging from infested fruit while allowing the parasitoids to escape, via a net placed at the top of the structure. This study focused on the performance and the efficiency of the augmentorium prototype recently tested in Reunion Island and particularly (i) the number of adult flies that can potentially be sequestered in an augmentorium in the field; (ii) the efficiency of the net mesh for fly sequestration and parasitoid escape; (iii) the feasibility of producing compost with infested fruit collected in the field. Method. The potential number of flies that could be sequestered was estimated by measuring in the lab the emergence of several species of flies from infested fruit collected in the field from 2005 to 2009 in different sites of the island. Emergence of adult flies was measured for six species of flies: (i) Bactrocera cucurbitae, Dacus ciliatus and D. demmerezi attacking three species of Cucurbits (pumpkin: Cucurbita maxima; cucumber: Cucumis sativus and courgette: Cucurbita pepo); (ii) Bactrocera zonata, Ceratitis rosa and C. capitata attacking one species of fruit (mango: Mangifera indica). The sequestration of three of these fly species (B. cucurbitae, B. zonata and C. capitata) and the escape of two of their parasitoids (Psyttalia fletcheri and Fopius arisanus) were assessed in the Cirad laboratory in Saint-Pierre in 2008. Preliminary tests on the feasibility of producing compost were then conducted in Saint-Pierre in 2009, mixing courgette and other components. Results. Collections of infested fruits showed the following means of emerged adults per kg of fruit: 76 for mango (B. zonata, C. rosa, C. capitata); 217 for cucumber, 340 for pumpkin and 594 for courgette (B. cucurbitae, D. ciliatus, D. demmerezi). The efficiency of the mesh chosen for the prototype of augmentorium (hole area 1.96 mm²) proved to be perfectly effective in the lab with 100% of sequestration of adult flies. In the same way, 100% of the parasitoids were able to escape from the mesh if they choose to do so. In addition, we showed that a ratio of 50:30:20 of courgette, sugar cane stem and chicken litter respectively was well adapted to produce compost. Conclusion. These results confirm the relevance and the efficiency of the augmentorium in an agroecological crop protection. As a sanitation technique against fruit flies, the augmentorium sequesters on average several hundreds of adult flies per kg of infested fruit. As a biological control method, it may contribute to increase parasitoid populations which are often low because of the previous and significant pesticide pressure. The augmentorium can also be considered as a useful tool to produce compost in the context of sustainable agriculture. The technique of sanitation using the augmentorium is now well accepted by farmers in pilot areas in Reunion Island. (Texte intégral)
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- 2010
34. Tritrophic interaction in the complexes of fruit flies damaging fruit and vegetable crops in Reunion island
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Quilici, Serge, Brévault, Thierry, Rousse, Pascal, Hurtrel, Béatrice, Duyck, Pierre François, Jacquard, Cathy, Delatte, Hélène, Deguine, Jean-Philippe, Lereculeur, Anabel, Wattier, Christophe, Atiama-Nurbel, Toulassi, Franck, Antoine, Simiand, Christophe, and Chiroleu, Frédéric
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Culture fruitière ,Dacus ,Tephritidae ,Culture maraîchère ,Parasitoïde ,H10 - Ravageurs des plantes ,Bactrocera ,Ceratitis - Abstract
The study of tri-trophic interactions is a vast field of basic ecological studies which are also of paramount importance for the development of environment-friendly methods of pest management. Within the Diptera, the Tephritidae family represents an interesting model for such studies because of the variable host-specificity of species in this group, and the important role that some natural enemies may play in the regulation of their populations. Furthermore, the great economic importance of many species in this family offers a large array of applications to research results. La Réunion, a French island situated in the south-west of the Indian Ocean, is a favourable area for studying such interactions, because of the number of tephritid species present in the island, and the great variability of its climatic conditions. On fruit crops, a complex of three polyphagous species of tephritids cause considerable damage: the Mediterranean fruit fly, Ceratitis capitata, the Natal fruit fly, Ceratitis rosa, and the Peach fruit fly, Bactrocera zonata. In addition, another complex of Dacini is harmful to cucurbit crops: the Melon fly, Bactrocera cucurbitae, the Ethiopian cucurbit fly, Dacus ciliatus, and the Indian Ocean cucurbit fly, Dacus demmerezi. Conversely, on Solanaceous crops such as tomato, the Tomato fruit fly Neoceratitis cyanescens, is the only species of economic importance. Over the last twenty years, many field studies allowed us to specify the host-range and relative importance of the different species on cultivated crops. Of particular interest are some host preferences observed in the field in some otherwise very polyphagous species, such as C. capitata. Detailed studies (lab, wind tunnel and field cages) were also devoted to the host location behaviour of stenophagous species, taking as a model the tomato fruit fly, N. cyanescens. Other behavioural studies also highlighted the preferences of the different species for particular host-plants during foraging or egg-laying behaviour. More recently, studies were focused on the quality of various host or non-host fruits for the pre-imaginal development of the different species, and its influence on their fitness. Though some indigenous parasitoids of the Mediterranean fruit fly have been recorded in the island, most of the natural regulation by parasitoids is due to exotic species imported through classical biological control programmes. This is particularly the case with two species imported from Hawaii, in collaboration with USDA Hawaii and the University of Hawaii: Psyttalia fletcheri, a larvo-pupal parasitoid of the Melon fly, and, more recently, Fopius arisanus, an egg-pupal parasitoid of some Bactrocera spp. Following the acclimatization of these two species, field studies allowed us to evaluate their host range, favourite habitats, and impact on host species populations. In addition, laboratory, field-cage and wind tunnel studies improved our knowledge of the stimuli involved in host habitat and host selection behaviours. Results of these studies are summarized and discussed in relation to the current state of knowledge of insect-plant and host-parasitoid interactions in tephritids, and to their possible applications in pest management. (Texte intégral)
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- 2010
35. La mouche de la pêche sur mangue, goyave, etc... à la Réunion, évolution des recherches et des méthodes de lutte
- Author
-
Quilici, Serge, Duyck, Pierre François, Rousse, Pascal, Gourdon, Frédéric, Simiand, Christophe, and Franck, Antoine
- Subjects
Mangue ,Lutte anti-insecte ,Tephritidae ,Plante fruitière ,Insecte déprédateur des fruits ,H10 - Ravageurs des plantes ,Psidium littorale ,Terminalia catappa ,Bactrocera ,Goyave - Abstract
La mouche de la pêche Bactrocera zonata, connue sur l'Île de la Réunion depuis 1991, s'y comporte en ravageur depuis 2000 notamment sur manguier, goyavier, goyavier de Chine et badamier(1). Que sait-on de cette mouche ? Comment cohabite-t-elle avec les autres mouches téphritides présentes avant elle sur l'île? Ou verra que la compétition entre espèces, mais aussi le besoin de chaleur et l'indifférence à l'humidité, expliquent sa distribution à la Réunion. Celle-ci connue, comment peut-on maîtriser B. zonata ? Une part de la réponse réside probablement dans la lutte biologique par acclimatation d'auxiliaire: un travail avec le parasitoïde Fopius arisanus est en cours. Il y a aussi la lutte intégrée en vergers, déjà menée contre les autres espèces mais à adapter en présence de B. zonata.
- Published
- 2005
36. Avancées récentes du programme de recherche sur les mouches des fruits au Cirad Réunion
- Author
-
Quilici, Serge, Duyck, Pierre François, Rousse, Pascal, Franck, Antoine, Simiand, Christophe, and Gourdon, Frédéric
- Subjects
Mangue ,Bactrocera cucurbitae ,Plante hôte ,Tephritidae ,Mangifera indica ,Insecte déprédateur des fruits ,H10 - Ravageurs des plantes ,Lutte biologique ,Bactrocera ,Ceratitis ,Lutte intégrée - Published
- 2004
37. Successful acclimatization of the parasitoid Ageniaspis citricola in Reunion island for the biological control of the Citrus leaf miner
- Author
-
Quilici, Serge, Franck, Antoine, Simiand, Christophe, and Malausa, Jean-Claude
- Subjects
H10 - Ravageurs des plantes - Abstract
The Citrus leaf-miner, Phyllocnistis citrella (Stainton) (Lepidoptera: Gracillariidae), first detected in La Reunion in 1995, rapidly spread to the whole island within a few months. During the following years, studies on the natural enemies complex of the leaf-miner showed the presence of five species of indigenous parasitoids (Hymenoptera: Eulophidae), with two species generally dominating : Neochrysocaris sp. and Sympiesis sp. However; during the following years, surveys on parasitism rates showed that indigenous parasitoids could not, in most cases, effectively control the leaf-miner populations. So, a biocontrol programme was initiated in 1998, in collaboration with INRA Antibes, in order to acclimatize the exotic ovo-pupal parasitoid Ageniaspis citricola Logvinovskaia (Hym. : Encyrtidae). A small-scale rearing was set up and releases made in a few suitable orchards in 1998-1999. A study on the evolution of leaf-miner populations and status of parasitism was carried out in 1999-2000. The seasonal variations of the leaf-miner populations were linked with vegetative flushes and the occurrence of other pests occupying a similar ecological niche (aphids, whiteflies). In 2000, A. citricola was detected in various localities, which confirmed the success of the acclimatisation programme. During recent years, damage caused the leaf-miner has been limited which is probably due to an improved biological equilibrium between the pest and its natural enemies. Future studies should focus on a better quantification of the impact of A. citricola.
- Published
- 2004
38. Seasonal occurrence of fruit flies in strawberry guava (Psidium cattleianum Sabine) in Reunion Island : host phenology and fruit infestation
- Author
-
Normand, Frédéric, Quilici, Serge, and Simiand, Christophe
- Subjects
Identification ,Relation hôte parasite ,Tephritidae ,Piège ,H10 - Ravageurs des plantes ,Psidium littorale ,Dynamique des populations ,Ceratitis ,Phénologie - Abstract
Le goyavier-fraise, très répandu sur l'île de la Réunion, est une plante hôte majeure de différentes espèces de mouches des fruits. Les relations entre la dynamique de population des mouches des fruits, la phénologie de la plante hôte et les dégâts sur fruits ont été étudiés. L'évolution saisonnière de l'abondance des mouches des fruits a été étudiée de 1992 à 1994 par piégeage sexuel dans trois zones naturellement envahies par P. cattleianum situées à 100 m, 480 m et 720 m d'altitude sur la côte humide de l'île. Les dégâts sur fruits ont été suivis durant les récoltes. La principale espèce de mouche des fruits capturée sur l'ensemble des sites a été la mouche du Natal, Ceratitis rosa Karsch. La mouche méditerranéenne des fruits, C. capitata (Wiedemann), et la mouche des fruits des Mascareignes, C. catoirii (Guérin-Mèneville), ont été occasionnellement capturées à 100 m et à 480 m d'altitude. Le goyavier-fraise s'avère être une plante hôte pour ces trois espèces du niveau de la mer jusqu'à 500 m d'altitude, avec une nette dominance de C. rosa. Au-delà de 500 m, seule cette espèce a été rencontrée dans les fruits piqués. Les populations de C. rosa ont été faibles durant toute l'année et ont augmenté au moment de la récolte du goyavier-fraise. L'abondance de C. rosa a varié significativement entre les sites, mais sans relation claire avec l'altitude. Ces résultats apportent des informations nouvelles sur la dynamique des populations de la mouche du Natal en relation avec l'une de ses principales plantes hôtes. Ils sont utiles pour définir des programmes de traitements phytosanitaires contre les mouches des fruits dans les vergers commerciaux de goyaviers-fraises.
- Published
- 2000
39. Enquête sur les parasitoïdes indigènes et lutte biologique contre la mineuse des agrumes, Phyllocnistis citrella Stainton (Lepidoptera : Gracillariidae) à la Réunion
- Author
-
Quilici, Serge, Franck, Antoine, Simiand, Christophe, Kurtz, C., and Lasalle, V.
- Subjects
H10 - Ravageurs des plantes - Published
- 1998
40. Dynamique des populations de Tephritidae à la Réunion
- Author
-
Quilici, Serge, Montagneux, B., Simiand, Christophe, Fernandez, Emmanuel, and Turpin, Patrick
- Subjects
H10 - Ravageurs des plantes - Published
- 1998
41. Population fluctuations of tephritids of economic importance in Reunion Island
- Author
-
Quilici, Serge, Montagneux, B., Simiand, Christophe, Fernandez, Emmanuel, and Turpin, Patrick
- Subjects
Culture fruitière ,Lutte antiravageur ,Écologie ,Tephritidae ,H10 - Ravageurs des plantes ,Bactrocera ,Dynamique des populations ,Ceratitis - Published
- 1998
42. Le programme de recherche sur les mouches des fruits dans l'Océan indien
- Author
-
Quilici, Serge, Vayssières, Jean-François, Hurtrel, Béatrice, Brévault, Thierry, Barbet, A., Fernandez, Emmanuel, Franck, Antoine, and Simiand, Christophe
- Subjects
Culture fruitière ,Lutte anti-insecte ,Culture maraîchère ,Recherche ,Histoire ,Ceratitis ,H20 - Maladies des plantes - Abstract
Les mouches des fruits sont responsables des dégâts majeurs sur les cultures fruitières et maraîchères à la Réunion, à Maurice, aux Seychelles et dans d'autres pays de l'Océan indien. Devant l'ampleur des ravages, des programmes nationaux de lutte ont été engagés sur l'acclimatation des parasitoïdes et le lâcher des mâles stériles. Mais l'arrêt des opérations entraîne une recrudescence des mouches. A la Réunion, une stratégie de lutte est développée par le CIRAD-FLHOR sur le principal ravageur (Ceratitis rosa) : piégeage sexuel, inventaire des ravageurs et des parasitoïdes et essais d'insecticides, en coopération avec d'autres centres de recherche locaux et nationaux
- Published
- 1997
43. Synthesis of sucrose analogues modified at position 4
- Author
-
Simiand, Christophe, Driguez, H., Centre de Recherches sur les Macromolécules Végétales (CERMAV), and Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)
- Subjects
ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 1995
44. Sucrose analogues modified at position 3: chemoenzymatic synthesis and inhibition studies of dextransucrases
- Author
-
Simiand, Christophe, Samain, E., Martin, O.R., Driguez, H., Centre de Recherches sur les Macromolécules Végétales (CERMAV), and Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)
- Subjects
ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 1995
45. Campagne de lutte raisonnée contre les mouches des fruits. Note technique
- Author
-
Quilici, Serge and Simiand, Christophe
- Subjects
Lutte chimique ,Lutte anti-insecte ,Tephritidae ,fruits ,H10 - Ravageurs des plantes ,Piège sexuel ,Immobilisation ,Insecticide - Abstract
Des méthodes de lutte chimique contre les mouches des fruits sont proposées. Des tableaux récapitulatifs présentent les doses, l'efficacité et les coûts des insecticides les plus utilisés
- Published
- 1994
46. Genetic diversity of the honeybee (Apis mellifera L.) populations in the Seychelles archipelago.
- Author
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Techer, Maéva A., Clémencet, Johanna, Simiand, Christophe, Portlouis, Gilbert, Reynaud, Bernard, Delatte, Hélène, Leather, Simon R., and Roubik, David
- Subjects
HONEYBEE genetics ,MITOCHONDRIAL DNA ,GENE flow ,NUCLEOTIDE sequencing ,MICROSATELLITE repeats - Abstract
1. In the South-West Indian Ocean, the honeybee Apis mellifera is found on several islands including the Seychelles archipelago. This archipelago is located 1120 km North of Madagascar, where the endemic African subspecies A. m. unicolor occurs. The genetic diversity of the honeybee populations in the Seychelles islands has never been studied, yet this species interacts with highly endemic and indigenous flora. 2. A total of 186 honeybee colonies from the three main islands: Mahé, Praslin and La Digue were collected. In addition, 107 individuals from Madagascar (A. m. unicolor) and 49 from Italy (A. m. ligustica) were analysed as reference populations. The maternal lineages were assessed using PCR-RFLP (n = 342) and sequencing (n = 121) of the mtDNA COI-COII intergenic region. Intra-Seychelles nuclear genetic diversity and structure were analysed using 15 microsatellites while comparison with reference populations was done using 14 loci. 3. All Seychellian colonies had mtDNA sequences characteristic of the African evolutionary lineage. Two sub-lineages were detected: AI sub-lineage (A1) was dominant (96.7%) on all islands and mostly represented by the subspecies A. m. unicolor, while Z sub-lineage was observed in six colonies from two islands. No mtDNA characteristic of imported European lineages was detected. 4. Nuclear genetic diversity was high and structured, suggesting restricted gene flow between islands of the archipelago. High nuclear similarities were found among the Seychellian and A. m. unicolor populations, yet significant genetic differentiation was observed. The A. m. ligustica reference population was highly differentiated from the Seychellian honeybee populations. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
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