1,236 results on '"Siika, A"'
Search Results
2. A qualitative study exploring graduated medical residents’ research experiences, barriers to publication and strategies to improve publication rates from medical residents
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Kamya, Dorothy, Macharia, Brigette, Siika, Wangari Waweru, and Mbuba, Caroline K.
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- 2024
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3. Biomarkers of mortality in adults and adolescents with advanced HIV in sub-Saharan Africa
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Riitho, Victor, Connon, Roisin, Gwela, Agnes, Namusanje, Josephine, Nhema, Ruth, Siika, Abraham, Bwakura-Dangarembizi, Mutsa, Musiime, Victor, Berkley, James A., Szubert, Alex J., Gibb, Diana M., Walker, A. Sarah, Klein, Nigel, and Prendergast, Andrew J.
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- 2024
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4. Fracture properties of porcine versus human thoracic aortas from tricuspid/bicuspid aortic valve patients via symmetry-constraint Compact Tension testing
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Marta Alloisio, Antti Siika, David Freiholtz, Anders Franco-Cereceda, Joy Roy, Hanna M. Björck, and T. Christian Gasser
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Medicine ,Science - Abstract
Abstract Aneurysm rupture is a life-threatening event, yet its underlying mechanisms remain largely unclear. This study investigated the fracture properties of the thoracic aneurysmatic aorta (TAA) using the symmetry-constraint Compact Tension (symconCT) test and compared results to native and enzymatic-treated porcine aortas’ tests. With age, the aortic stiffness increased, and tissues ruptured at lower fracture energy $$D$$ . Patients with bicuspid aortic valves were more sensitive to age, had stronger aortas and required more $$D$$ than tricuspid valves individuals (peak load: axial loading 4.42 $$\pm$$ 1.56 N vs 2.51 $$\pm$$ 1.60 N; circumferential loading 5.76 $$\pm$$ 2.43 N vs 4.82 $$\pm$$ 1.49 N. Fracture energy: axial loading 1.92 $$\pm$$ 0.60 kJ m-2 vs 0.74 $$\pm$$ 0.50 kJ m-2; circumferential loading 2.12 $$\pm$$ 2.39 kJ m-2 vs 1.47 $$\pm$$ 0.91 kJ m-2). Collagen content partly explained the variability in $$D$$ , especially in bicuspid cases. Besides the primary crack, TAAs and enzymatic-treated porcine aortas displayed diffuse and shear-dominated dissection and tearing. As human tissue tests resembled enzymatic-treated porcine aortas, microstructural degeneration, including elastin loss and collagen degeneration, seems to be the main cause of TAA wall weakening. Additionally, a tortuous crack developing during the symconCT test reflected intact fracture toughening mechanisms and might characterize a healthier aorta.
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- 2025
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5. Global Equity in Clinical Trials: A Pragmatic Approach
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Hussain I. Rangoonwala, Jennifer S. Morgan, Elias Melly, Abraham Siika, Patrick J. Loehrer, and Naftali Busakhala
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2025
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6. Switch to long-acting cabotegravir and rilpivirine in virologically suppressed adults with HIV in Africa (CARES): week 48 results from a randomised, multicentre, open-label, non-inferiority trial
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Mugerwa, Henry, Tamale, William, Yiga, Joshua, Asaasira, Susan Esther, Kinyera, Nigel, Nambi, Christine, Nakiboneka, Dridah Luyirika, Kabatana, Rose, Kiyimba, Winfred, Ategeka, Gilbert, Yawe, Ibrahim, Alinaitwe, Adolf, Zawedde, Aidah, Wasswa, George, Arinda, Allan, Rweyora, Angela, Kangah, Mary Goretti, Cresswell, Fiona, Castelnuovo, Barbara, Kaimal, Arvind, Ogwal, Patience, Muhumuza, Neville, Okwero, Max, Ayebare, Peruth, Nakate, Vivian, Asienzo, Jesca, Mayanja, Hamza, Laker, Eva, Shah, Reena, Riunga, Felix, Onyango, Peter Odhiambo, Wanja, Josephine, Sayed, Shaheen, Gohil, Jaimini, Mungathia, Isaiah, Githuka, Alfred Mburu, Kibwage, Haron, Siika, Abraham Mosigisi, Wambui, Charity Kanyoro, Kirui, Viola Cherotich, Kipyego, Jairus, Sang, Natalie, Mokaya, Martha Mokeira Bisieri, Chepkorir, Consolata, Mboya, Chris Sande, Tonui, Ronald, Njulu, Florence, Kaziga, Hilda, Kosgei, Josphat, Sawe, Fredrick, Omol, Magdaline Adhiambo, Riziki, Faith, Daud, Ibrahim, Kimetto, Leelgo, Okumu, Billy Omalla, Lipuku, Francis, Sokhela, Simiso, Venter, Francois, Moller, Karlien, Nzuza, Nompumelelo, Ramela, Gontse, Tom, Noxolo, Nyamuzihwa, Tsitsi, Macholo, Philadelphia, Macebele, Hlamulani, Akpomiemie, Godspower, Naidoo, Logashvari, Jeenarain, Nitesha, Hurbans, Nivriti, Reddy, Mayuri, Mphisa, Gerald Thsepo, Kityo, Cissy, Paton, Nicholas, Mambule, Ivan Kiggundu, Opiyo, Kimton, Musaazi, Joseph, Otike, Caroline, Kabanyoro, Ritah, Sekajja, Francis, Nantumbwe, Sandra, Sekabira, Harriet, Ocitti, Paul, Ouma, Benson, Nankya, Immaculate, Ainembabazi, Pamela, Lötter, Melissa, Mohamed, Saeeda, Herbst, Madel, Peters, Tarryn, Mehta, Heena, Khan, Shaguftha, Kruger, Marlien, van Rein-van der Horst, Willemijn, Addo Boateng, Fafa, Van Solingen, Rodica, Vandermeulen, Kati, Van Eygen, Veerle, Crauwels, Herta, Luo, Donghan, Votto, Donna, Idahosa, Awhonukeh, Mwendia, Fridah, Klasko-Foster, Lynne, Bondal, Malavika, Eshun-Wilsonova, Ingrid, Mohammed, Perry, Spreen, William, D'Amico, Ronald, Kaleebu, Pontiano, Ojoo, Sylvia, Katana, Milly, Moosa, Yunus, Phiri, Sam, Munderi, Paula, Hill, Andrew, Mambule, Ivan K, Siika, Abraham, Möller, Karlien, Wambui, Charity, and Paton, Nicholas I
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- 2024
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7. Oxygen saturation targets for adults with acute hypoxemia in low and lower-middle income countries: a scoping review with analysis of contextual factors
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Herbst, Austin, Goel, Swati, Beane, Abi, Brotherton, B Jason, Dula, Dingase, Ely, E Wesley, Gordon, Stephen B, Haniffa, Rashan, Hedt-Gauthier, Bethany, Limbani, Felix, Lipnick, Michael S, Lyon, Samuel, Njoki, Carolyne, Oduor, Peter, Otieno, George, Pisani, Luigi, Rylance, Jamie, Shrime, Mark G, Uwamahoro, Doris Lorette, Vanderburg, Sky, Waweru-Siika, Wangari, Twagirumugabe, Theogene, and Riviello, Elisabeth
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Clinical Trials and Supportive Activities ,Good Health and Well Being ,LMICs ,Africa ,context ,oxygen saturation targets ,SpO(2) ,SpO2 ,Biomedical and clinical sciences ,Health sciences - Abstract
Knowing the target oxygen saturation (SpO2) range that results in the best outcomes for acutely hypoxemic adults is important for clinical care, training, and research in low-income and lower-middle income countries (collectively LMICs). The evidence we have for SpO2 targets emanates from high-income countries (HICs), and therefore may miss important contextual factors for LMIC settings. Furthermore, the evidence from HICs is mixed, amplifying the importance of specific circumstances. For this literature review and analysis, we considered SpO2 targets used in previous trials, international and national society guidelines, and direct trial evidence comparing outcomes using different SpO2 ranges (all from HICs). We also considered contextual factors, including emerging data on pulse oximetry performance in different skin pigmentation ranges, the risk of depleting oxygen resources in LMIC settings, the lack of access to arterial blood gases that necessitates consideration of the subpopulation of hypoxemic patients who are also hypercapnic, and the impact of altitude on median SpO2 values. This process of integrating prior study protocols, society guidelines, available evidence, and contextual factors is potentially useful for the development of other clinical guidelines for LMIC settings. We suggest that a goal SpO2 range of 90-94% is reasonable, using high-performing pulse oximeters. Answering context-specific research questions, such as an optimal SpO2 target range in LMIC contexts, is critical for advancing equity in clinical outcomes globally.
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- 2023
8. A health systems approach to critical care delivery in low-resource settings: a narrative review
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Spencer, Stephen A., Adipa, Faustina Excel, Baker, Tim, Crawford, Ana Maria, Dark, Paul, Dula, Dingase, Gordon, Stephen B., Hamilton, David Oliver, Huluka, Dawit Kebede, Khalid, Karima, Lakoh, Sulaiman, Limbani, Felix, Rylance, Jamie, Sawe, Hendry R., Simiyu, Ibrahim, Waweru-Siika, Wangari, Worrall, Eve, and Morton, Ben
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- 2023
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9. Editorial: Critical care applications: bridging high, medium and low-income settings
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Luigi Pisani, Wangari Waweru Siika, and Madiha Hashmi
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low and middle income countries (LMIC) ,pneumotacograph ,frugal intensive care ,protective ventilation ,mechanical ventilation ,Medicine (General) ,R5-920 - Published
- 2024
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10. Three-dimensional growth and biomechanical risk progression of abdominal aortic aneurysms under serial computed tomography assessment
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Antti Siika, Marko Bogdanovic, Moritz Lindquist Liljeqvist, T. Christian Gasser, Rebecka Hultgren, and Joy Roy
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Medicine ,Science - Abstract
Abstract Growth of abdominal aortic aneurysms (AAAs) is often described as erratic and discontinuous. This study aimed at describing growth patterns of AAAs with respect to maximal aneurysm diameter (Dmax) and aneurysm volume, and to characterize changes in the intraluminal thrombus (ILT) and biomechanical indices as AAAs grow. 384 computed tomography angiographies (CTAs) from 100 patients (mean age 70.0, standard deviation, SD = 8.5 years, 22 women), who had undergone at least three CTAs, were included. The mean follow-up was 5.2 (SD = 2.5) years. Growth of Dmax was 2.64 mm/year (SD = 1.18), volume 13.73 cm3/year (SD = 10.24) and PWS 7.3 kPa/year (SD = 4.95). For Dmax and volume, individual patients exhibited linear growth in 87% and 77% of cases. In the tertile of patients with the slowest Dmax-growth (
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- 2023
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11. Efficacy and safety of dolutegravir or darunavir in combination with lamivudine plus either zidovudine or tenofovir for second-line treatment of HIV infection (NADIA): week 96 results from a prospective, multicentre, open-label, factorial, randomised, non-inferiority trial
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Kambugu, Andrew, Kaimal, Arvind, Castelnuovo, Barbara, Kiiza, Daniel, Asienzo, Jesca, Kisembo, John, Nsubuga, John, Okwero, Max, Muyise, Rhona, Kityo, Cissy, Nasaazi, Claire, Nakiboneka, Dridah L., Mugerwa, Henry, Namusanje, Josephine, Najjuuko, Theresa, Masaba, Timothy, Serumaga, Timothy, Alinaitwe, Adolf, Arinda, Allan, Rweyora, Angela, Ategeka, Gilbert, Kangah, Mary Goretti, Lugemwa, Abbas, Kasozi, Mariam, Tukumushabe, Phionah, Akunda, Rogers, Makumbi, Shafic, Musumba, Sharif, Myalo, Sula, Ahuura, John, Namusisi, Annet Mary, Kibirige, Daniel, Kiweewa, Francis, Mirembe, Grace, Mabonga, Habert, Wandege, Joseph, Nakakeeto, Josephine, Namubiru, Sharon, Nansalire, Winfred, Siika, Abraham Mosigisi, Kwobah, Charles Meja, Mboya, Chris Sande, Mokaya, Martha Mokeira Bisieri, Karoney, Mercy Jelagat, Cheruiyot, Priscilla Chepkorir, Cherutich, Salinah, Njuguna, Simon Wachira, Kirui, Viola Cherotich, Borok, Margaret, Chidziva, Ennie, Musoro, Godfrey, Hakim, James, Bhiri, Joyline, Phiri, Misheck, Mudzingwa, Shepherd, Manyanga, Tadios, Kiragga, Agnes, Banegura, Anchilla Mary, Hoppe, Anne, Balyegisawa, Apolo, Agwang, Betty, Isaaya, Brian, Tumwine, Constantine, Odongpiny, Eva Laker A., Musaazi, Joseph, Paton, Nicholas, Senkungu, Peter, Walimbwa, Stephen, Kamara, Yvonne, Amperiize, Mathius, Allen, Elizabeth, Opondo, Charles, Mohammed, Perry, van Rein-van der Horst, Willemijn, Van Delft, Yvon, Boateng, Fafa Addo, Namara, Doreen, Kaleebu, Pontiano, Ojoo, Sylvia, Bwakura, Tapiwanashe, Katana, Milly, Venter, Francois, Phiri, Sam, Walker, Sarah, Paton, Nicholas I, Siika, Abraham, and Odongpiny, Eva Laker A
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- 2022
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12. Epidemiology, Clinical Characteristics, and Outcomes of 4546 Adult Admissions to High-Dependency and ICUs in Kenya: A Multicenter Registry-Based Observational Study
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Carolyne Njoki, MD, Nabukwangwa Simiyu, MD, Ronnie Kaddu, MD, Wambui Mwangi, MD, Demet Sulemanji, MD, Peter Oduor, MD, Dilanthi Gamage Dona, MS, Dorothy Otieno, MS, Teddy Thaddeus Abonyo, BSN, Patricia Wangeci, Thomas Kabanya, Nurse, Selina Mutuku, Annastacia Kioko, Nurse, Joy Muthoni, Peter Mburu Kamau, Nurse, Abigail Beane, PhD, Rashan Haniffa, PhD, Arjen Dondorp, Prof, PhD, David Misango, MD, Luigi Pisani, PhD, and Wangari Waweru-Siika, MD
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Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
OBJECTIVES:. To describe clinical, management, and outcome features of critically ill patients admitted to ICUs and high-dependency units (HDUs) in Kenya. DESIGN:. Prospective registry-based observational study. SETTING:. Three HDUs and eight ICUs in Kenya. PATIENTS:. Consecutive adult patients admitted between January 2021 and June 2022. INTERVENTIONS:. None. MEASUREMENTS AND MAIN RESULTS:. Data were entered in a cloud-based platform using a common data model. Study endpoints included case-mix variables, management features, and patient-centered outcomes. Patients with COVID-19 were reported separately. Of the 3892 of 4546 patients without COVID-19, 2445 patients (62.8%) were from HDUs, and 1447 patients (37.2%) were from ICUs. Patients had a median age of 53 years (interquartile range [IQR] 38–68), with HDU patients being older but with a lower severity (Acute Physiology and Chronic Health Evaluation II 6 [3–9] in HDUs vs. 12 [7–17] in ICUs; p < 0.001). One in four patients was postoperative with 604 (63.4%) receiving emergency surgery. Readmission rate was 4.8%. Hypertension and diabetes were prevalent comorbidities, with a 4.0% HIV/AIDS rate. Invasive mechanical ventilation was applied in 3.4% in HDUs versus 47.6% in ICUs (p < 0.001), with a duration of 7 days (IQR 3–21). There was a similar use of renal replacement therapy (4.0% vs. 4.7%; p < 0.001). Vasopressor use was infrequent while half of patients received antibiotics. Average length of stay was 2 days (IQR 1–5). Crude HDU mortality rate was 6.5% in HDUs versus 30.5% in the ICUs (p < 0.001). Of the 654 COVID-19 admissions, most were admitted in ICUs (72.3%) with a 33.2% mortality. CONCLUSIONS:. We provide the first multicenter observational cohort study from an African ICU National Registry. Distinct management features and outcomes characterize HDU from ICU patients.
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- 2024
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13. Merging Geometrical, Biomechanical, and Clinical Data To Assess the Rupture Risk of Abdominal Aortic Aneurysms
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M. Alloisio, A. Siika, J. Roy, S. Zerwes, A. Hyhlik-duerr, and T.C. Gasser
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Diseases of the circulatory (Cardiovascular) system ,RC666-701 ,Surgery ,RD1-811 - Published
- 2024
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14. Efficacy of a bivalent (D614 + B.1.351) SARS-CoV-2 recombinant protein vaccine with AS03 adjuvant in adults: a phase 3, parallel, randomised, modified double-blind, placebo-controlled trial
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Abalos, Karina, Accini, Jose, Aloysia, Naveena, Amuasi, John Humphrey, Ansah, Nana Akosua, Benkeser, David, Berge, Aude, Beyko, Hanna, Bilotkach, Oleksandra, Breuer, Thomas, Bonfanti, Alberto Cadena, Bukusi, Elisabeth, Canter, Richard, Carrillo, Jaime Augusto, Chansinghakul, Danaya, Coux, Florence, Das, Chandan, Das, Santa Kumar, Devlin, Louis, Espinoza, Luis, Fay, Michael, Follmann, Dean, Frago, Carina, Garinga, Agnes, Gilbert, Peter B, Gonzalez, Claudia, Granados, Maria Angelica, Guillery, Lea, Huang, Ying, Hudzina, Kathy, Jain, Manish, Kanodia, Piush, Khandelwal, Nitin, Mutuluuza, Cissy Kityo, Kiweewa, Francis, Kiwanuka, Noah, Kosolsak, Chalit, Kukian, Darshna, Kushwaha, Jitendra Singh, Laot, Thelma, Lopez-Medina, Eduardo, Macareno Arroyo, Hugo, Mandaliya, Kishorchandra, Mamod, Stephanie, Mangarule, Somnath, Martínez, Javier, McClelland, Scott, Menard, Lisa, Mendoza, Sandra, Mohapatra, Satyajit, Moreau, Catherine, Mugo, Nelly, Nduba, Videlis, Noriega, Fernando, Ntege, Patricia Nahirya, Okech, Brenda, Otero, Maria, Ouma, Samuel Gurrion, Oyieko, Janet, Paredes, Mercedes, Pardo, Erwin, Postol, Svitlana, Pekala, David, Peng, Penny, Py, Marie-Laure, Rivas, Enrique, Rivero, Rafael, Rodriguez, Edith, Saleh, Mansoor, Sánchez, Pedro, Sater, Nessryne, Shah, Jinen, Shrestha, Rajeev, Siika, Abraham, Singh, Chandramani, Singh, Veer Bahadur, Tamrakar, Dipesh, Tavares Da-Silva, Fernanda, Otieno Tina, Lucas, Velasquez, Hector, Wabwire, Deo, Wajja, Anne, Zaworski, Elodie, Zhang, Nianxian, Dayan, Gustavo H, Rouphael, Nadine, Walsh, Stephen R, Chen, Aiying, Grunenberg, Nicole, Allen, Mary, Antony, Johannes, Asante, Kwaku Poku, Bhate, Amit Suresh, Beresnev, Tatiana, Bonaparte, Matthew I, Celle, Médéric, Ceregido, Maria Angeles, Corey, Lawrence, Dobrianskyi, Dmytro, Fu, Bo, Grillet, Marie-Helene, Keshtkar-Jahromi, Maryam, Juraska, Michal, Kee, Jia Jin, Kibuuka, Hannah, Koutsoukos, Marguerite, Masotti, Roger, Michael, Nelson L, Neuzil, Kathleen M, Reynales, Humberto, Robb, Merlin L, Villagómez Martínez, Sandra M, Sawe, Fredrick, Schuerman, Lode, Tong, Tina, Treanor, John, Wartel, T Anh, Diazgranados, Carlos A, Chicz, Roman M, Gurunathan, Sanjay, Savarino, Stephen, and Sridhar, Saranya
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- 2023
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15. Modeling the Causal Effect of Treatment Initiation Time on Survival: Application to HIV/TB Co-infection
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Hu, Liangyuan, Hogan, Joseph W., Mwangi, Ann W., and Siika, Abraham
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Statistics - Applications ,Statistics - Methodology - Abstract
The timing of antiretroviral therapy (ART) initiation for HIV and tuberculosis (TB) co-infected patients needs to be considered carefully. CD4 cell count can be used to guide decision making about when to initiate ART. Evidence from recent randomized trials and observational studies generally supports early initiation but does not provide information about effects of initiation time on a continuous scale. In this paper, we develop and apply a highly flexible structural proportional hazards model for characterizing the effect of treatment initiation time on a survival distribution. The model can be fitted using a weighted partial likelihood score function. Construction of both the score function and the weights must accommodate censoring of the treatment initiation time, the outcome, or both. The methods are applied to data on 4903 individuals with HIV/TB co-infection, derived from electronic health records in a large HIV care program in Kenya. We use a model formulation that flexibly captures the joint effects of ART initiation time and ART duration using natural cubic splines. The model is used to generate survival curves corresponding to specific treatment initiation times; and to identify optimal times for ART initiation for subgroups defined by CD4 count at time of TB diagnosis. Our findings potentially provide "higher resolution" information about the relationship between ART timing and mortality, and about the differential effect of ART timing within CD4 subgroups., Comment: Published in Biometrics
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- 2019
16. Effect of the relationship between anaemia and systemic inflammation on the risk of incident tuberculosis and death in people with advanced HIV: a sub-analysis of the REMEMBER trial
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Araújo-Pereira, Mariana, Krishnan, Sonya, Salgame, Padmini, Manabe, Yukari C., Hosseinipour, Mina C., Bisson, Gregory, Severe, Damocles Patrice, Rouzier, Vanessa, Leong, Samantha, Mave, Vidya, Sawe, Fredrick Kipyego, Siika, Abraham M., Kanyama, Cecilia, Dadabhai, Sufia S., Lama, Javier R., Valencia-Huamani, Javier, Badal-Faesen, Sharlaa, Lalloo, Umesh Gangaram, Naidoo, Kogieleum, Mohapi, Lerato, Kityo, Cissy, Andrade, Bruno B., and Gupta, Amita
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- 2023
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17. Epidemiology, Clinical Characteristics, and Outcomes of 4546 Adult Admissions to High-Dependency and ICUs in Kenya: A Multicenter Registry-Based Observational Study
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Njoki, Carolyne, Simiyu, Nabukwangwa, Kaddu, Ronnie, Mwangi, Wambui, Sulemanji, Demet, Oduor, Peter, Dona, Dilanthi Gamage, Otieno, Dorothy, Abonyo, Teddy Thaddeus, Wangeci, Patricia, Kabanya, Thomas, Mutuku, Selina, Kioko, Annastacia, Muthoni, Joy, Kamau, Peter Mburu, Beane, Abigail, Haniffa, Rashan, Dondorp, Arjen, Misango, David, Pisani, Luigi, and Waweru-Siika, Wangari
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- 2024
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18. Enzyme-treated chicory for cosmetics: application assessment and techno-economic analysis
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Suvi Tuulikki Häkkinen, Katarina Cankar, Liisa Nohynek, Marjut Suomalainen, Jeroen van Arkel, Matti Siika-Aho, Anna Twarogowska, Bart Van Droogenbroeck, and Kirsi-Marja Oksman-Caldentey
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Chicory ,By-product ,Antimicrobial activity ,Enzyme treatment ,Techno-economic analysis ,Biotechnology ,TP248.13-248.65 ,Microbiology ,QR1-502 - Abstract
Keypoints Industrial chicory waste streams can be upgraded. Chicory by-product was treated with enzymes to produce an antimicrobial ingredient. Process is profitable and product suitable for cosmetic/personal care applications.
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- 2022
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19. Mixed methods study protocol for combining stakeholder-led rapid evaluation with near real-time continuous registry data to facilitate evaluations of quality of care in intensive care units [version 3; peer review: 2 approved]
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Mavuto Mukaka, Arjen M Dondorp, Bharath Kumar Tirupakuzhi Vijayaraghavan, Arthur Kwizera, Cassia Righy, Bruce Biccard, Cornelius Sendagire, Christopher Pell, Dilanthi Gamage Done, David Thomson, Farah Nadia, Duncan Wagstaff, Hem Panaru, Giovanni Putoto, Diptesh Aryal, Jorge Salluh, Abi Beane, John Amuasi, Krishnarajah Nirantharakumar, Krishna Gokhale, Maryam Shamal Ghalib, Madiha Hashmi, Marcus Schultz, C. Louise Thwaites, Moses Siaw-frimpong, Rashan Haniffa, Mohammed Basri Mat-Nor, Ronnie P Kaddu, Rajendra Surenthirakumaran, Srinivas Murthy, Aasiyah Rashan, Snehal Pinto Pereira, Suneetha Ramani Moonesinghe, Steve Harris, Tiffany E Gooden, Sutharshan Vengadasalam, Wangari Waweru-Siika, Luigi Pisani, Vrindha Pari, Aniruddha Ghose, Yen Lam Minh, Timo Tolppa, Swagata Tripathy, and Ishara Udayanga
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rapid evaluation ,quality of care ,intensive care ,critical illness ,low- and middle-income countries ,learning health systems ,eng ,Medicine ,Science - Abstract
Background Improved access to healthcare in low- and middle-income countries (LMICs) has not equated to improved health outcomes. Absence or unsustained quality of care is partly to blame. Improving outcomes in intensive care units (ICUs) requires delivery of complex interventions by multiple specialties working in concert, and the simultaneous prevention of avoidable harms associated with the illness and the treatment interventions. Therefore, successful design and implementation of improvement interventions requires understanding of the behavioural, organisational, and external factors that determine care delivery and the likelihood of achieving sustained improvement. We aim to identify care processes that contribute to suboptimal clinical outcomes in ICUs located in LMICs and to establish barriers and enablers for improving the care processes. Methods Using rapid evaluation methods, we will use four data collection methods: 1) registry embedded indicators to assess quality of care processes and their associated outcomes; 2) process mapping to provide a preliminary framework to understand gaps between current and desired care practices; 3) structured observations of processes of interest identified from the process mapping and; 4) focus group discussions with stakeholders to identify barriers and enablers influencing the gap between current and desired care practices. We will also collect self-assessments of readiness for quality improvement. Data collection and analysis will be led by local stakeholders, performed in parallel and through an iterative process across eight countries: Kenya, India, Malaysia, Nepal, Pakistan, South Africa, Uganda and Vietnam. Conclusions The results of our study will provide essential information on where and how care processes can be improved to facilitate better quality of care to critically ill patients in LMICs; thus, reduce preventable mortality and morbidity in ICUs. Furthermore, understanding the rapid evaluation methods that will be used for this study will allow other researchers and healthcare professionals to carry out similar research in ICUs and other health services.
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- 2023
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20. Cultural Considerations in the Declaration of Death by Neurologic Criteria in Africa
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Waweru-Siika, Wangari, Sokhi, Dilraj Singh, Naanyu, Violet, Dubljević, Veljko, Series Editor, Jotterand, Fabrice, Series Editor, Jox, Ralf J., Series Editor, Racine, Eric, Series Editor, Lewis, Ariane, editor, and Bernat, James L., editor
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- 2022
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21. Biomechanics and early sac regression after endovascular aneurysm repair of abdominal aortic aneurysm
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Bogdanovic, Marko, Siika, Antti, Lindquist Liljeqvist, Moritz, Gasser, T. Christian, Hultgren, Rebecka, and Roy, Joy
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- 2023
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22. Utility of healthcare-worker-targeted antimicrobial stewardship interventions in hospitals of low- and lower-middle-income countries: a scoping review of systematic reviews
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Wade, T., Roberts, N., Ban, J-W., Waweru-Siika, W., Winston, H., Williams, V., Heneghan, C.J., and Onakpoya, I.J.
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- 2023
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23. Double Robust Efficient Estimators of Longitudinal Treatment Effects: Comparative Performance in Simulations and a Case Study
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Tran, Linh, Yiannoutsos, Constantin, Wools-Kaloustian, Kara, Siika, Abraham, van der Laan, Mark, and Petersen, Maya
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Clinical Trials and Supportive Activities ,Clinical Research ,Algorithms ,Biostatistics ,Causality ,Cohort Studies ,Computer Simulation ,Data Interpretation ,Statistical ,HIV Infections ,Humans ,Likelihood Functions ,Longitudinal Studies ,Machine Learning ,Models ,Statistical ,Probability ,Propensity Score ,Research Design ,Software ,Treatment Outcome ,aiptw ,causal inference ,double robust ,efficient influence function ,iptw ,longitudinal treatment ,multiple testing ,semiparametric models ,tmle ,Statistics ,Statistics & Probability - Abstract
A number of sophisticated estimators of longitudinal effects have been proposed for estimating the intervention-specific mean outcome. However, there is a relative paucity of research comparing these methods directly to one another. In this study, we compare various approaches to estimating a causal effect in a longitudinal treatment setting using both simulated data and data measured from a human immunodeficiency virus cohort. Six distinct estimators are considered: (i) an iterated conditional expectation representation, (ii) an inverse propensity weighted method, (iii) an augmented inverse propensity weighted method, (iv) a double robust iterated conditional expectation estimator, (v) a modified version of the double robust iterated conditional expectation estimator, and (vi) a targeted minimum loss-based estimator. The details of each estimator and its implementation are presented along with nuisance parameter estimation details, which include potentially pooling the observed data across all subjects regardless of treatment history and using data adaptive machine learning algorithms. Simulations are constructed over six time points, with each time point steadily increasing in positivity violations. Estimation is carried out for both the simulations and applied example using each of the six estimators under both stratified and pooled approaches of nuisance parameter estimation. Simulation results show that double robust estimators remained without meaningful bias as long as at least one of the two nuisance parameters were estimated with a correctly specified model. Under full misspecification, the bias of the double robust estimators remained better than that of the inverse propensity estimator under misspecification, but worse than the iterated conditional expectation estimator. Weighted estimators tended to show better performance than the covariate estimators. As positivity violations increased, the mean squared error and bias of all estimators considered became worse, with covariate-based double robust estimators especially susceptible. Applied analyses showed similar estimates at most time points, with the important exception of the inverse propensity estimator which deviated markedly as positivity violations increased. Given its efficiency, ability to respect the parameter space, and observed performance, we recommend the pooled and weighted targeted minimum loss-based estimator.
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- 2019
24. WHO O2CoV2: oxygen requirements and respiratory support in patients with COVID-19 in low-and-middle income countries—protocol for a multicountry, prospective, observational cohort study
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Jie Li, Rashan Haniffa, Yaseen M Arabi, Srinivas Murthy, Sylvie Chevret, Ludovic Reveiz, Christophe Guitton, Janet Diaz, Devasahayam J Christopher, John C Marshall, Neill Adhikari, Rob Fowler, Leticia Kawano-Dourado, Arthur Kwizera, Tim Baker, Djillali Annane, Pauline Convocar, Elisabeth Riviello, Madiha Hashmi, Jonathan AC Sterne, Jorge Salluh, Diptesh Aryal, Pryanka Relan, Richard Kojan, Wangari Waweru-Siika, Chiori Kodama, Neale Batra, Sara Dominguez Rodriguez, Martha Gartley, Ewan Goligher, Devachandran Jayakumar, Richard H Kallet, Armand Mekontso-Dessap, Christian Paletta, Ingrid Lara Rendon, Bruno Martins Tomazini, Bharath Kumar Tirupakuzhi Vijayaraghavan, Fernando Zampieri, Gasim Amrahli, John Appiah, Kieran Bligh, Mohammed Derow, Laura Alejandra Velez Ruiz Gaitan, Itziar Carrasco Garcia, Bridget Griffith, Rashidatu Kamara, Gary Kuniyoshi, Maria Mendes, Dina Pfeifer, Cinzia DeBrito Procopio, Matthieu Rolland, Amadou Seck, Elizabeth Stanway, Julie Viry, and Pushpa Wijesinghe
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Medicine - Abstract
Introduction SARS-CoV-2 has been identified as the cause of the disease officially named COVID-19, primarily a respiratory illness. COVID-19 was characterised as a pandemic on 11 March 2020. It has been estimated that approximately 20% of people with COVID-19 require oxygen therapy. Oxygen has been listed on the WHO Model List of Essential Medicines List and Essential Medicines List for Children for almost two decades. The COVID-19 pandemic has highlighted, more than ever, the acute need for scale-up of oxygen therapy. Detailed data on the use of oxygen therapy in low-and-middle income countries at the patient and facility level are needed to target interventions better globally.Methods and analysis We aim to describe the requirements and use of oxygen at the facility and patient level of approximately 4500 patients with COVID-19 in 30 countries. Our objectives are specifically to characterise type and duration of different modalities of oxygen therapy delivered to patients; describe demographics and outcomes of hospitalised patients with COVID-19; and describe facility-level oxygen production and support. Primary analyses will be descriptive in nature. Respiratory support transitions will be described in Sankey plots, and Kaplan-Meier models will be used to estimate probability of each transition. A multistate model will be used to study the course of hospital stay of the study population, evaluating transitions of escalating respiratory support transitions to the absorbing states.Ethics and dissemination WHO Ad Hoc COVID-19 Research Ethics Review Committee (ERC) has approved this global protocol. When this protocol is adopted at specific country sites, national ERCs may make require adjustments in accordance with their respective national research ethics guidelines. Dissemination of this protocol and global findings will be open access through peer-reviewed scientific journals, study website, press and online media.Trial registration number NCT04918875.
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- 2023
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25. Ischemic stroke at first presentation of Takayasu arteritis in a young African male from Kenya, East Africa: Case report and brief literature review
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Christopher Owino, Betty Sirera, Felix Tarus, Beryl Ganda, Chrispine Oduor, and Abraham Siika
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cerebrovascular accident ,stroke ,Takayasu arteritis ,vasculitis ,Medicine ,Medicine (General) ,R5-920 - Abstract
Key Clinical Message This case highlights the need for thorough clinical examination to rule out Takayasu arteritis (TA) as a cause of stroke in a young asymptomatic East‐African male. Available clinical management guidelines should guide management of TA patients. Abstract We present a case of a young, previously asymptomatic East‐African Black male presenting with large territory ischemic infarct at first diagnosis of TA. To our knowledge, this is the first published report of a male patient in East Africa with a stroke as the first presentation of TA.
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- 2023
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26. Oxygen saturation targets for adults with acute hypoxemia in low and lower-middle income countries: a scoping review with analysis of contextual factors
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Austin Herbst, Swati Goel, Abi Beane, B. Jason Brotherton, Dingase Dula, E. Wesley Ely, Stephen B. Gordon, Rashan Haniffa, Bethany Hedt-Gauthier, Felix Limbani, Michael S. Lipnick, Samuel Lyon, Carolyne Njoki, Peter Oduor, George Otieno, Luigi Pisani, Jamie Rylance, Mark G. Shrime, Doris Lorette Uwamahoro, Sky Vanderburg, Wangari Waweru-Siika, Theogene Twagirumugabe, and Elisabeth Riviello
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LMICs ,Africa ,context ,oxygen saturation targets ,SpO2 ,Medicine (General) ,R5-920 - Abstract
Knowing the target oxygen saturation (SpO2) range that results in the best outcomes for acutely hypoxemic adults is important for clinical care, training, and research in low-income and lower-middle income countries (collectively LMICs). The evidence we have for SpO2 targets emanates from high-income countries (HICs), and therefore may miss important contextual factors for LMIC settings. Furthermore, the evidence from HICs is mixed, amplifying the importance of specific circumstances. For this literature review and analysis, we considered SpO2 targets used in previous trials, international and national society guidelines, and direct trial evidence comparing outcomes using different SpO2 ranges (all from HICs). We also considered contextual factors, including emerging data on pulse oximetry performance in different skin pigmentation ranges, the risk of depleting oxygen resources in LMIC settings, the lack of access to arterial blood gases that necessitates consideration of the subpopulation of hypoxemic patients who are also hypercapnic, and the impact of altitude on median SpO2 values. This process of integrating prior study protocols, society guidelines, available evidence, and contextual factors is potentially useful for the development of other clinical guidelines for LMIC settings. We suggest that a goal SpO2 range of 90-94% is reasonable, using high-performing pulse oximeters. Answering context-specific research questions, such as an optimal SpO2 target range in LMIC contexts, is critical for advancing equity in clinical outcomes globally.
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- 2023
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27. Switch to long-acting cabotegravir and rilpivirine in virologically suppressed adults with HIV in Africa (CARES): week 48 results from a randomised, multicentre, open-label, non-inferiority trial
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Kityo, Cissy, primary, Mambule, Ivan K, additional, Musaazi, Joseph, additional, Sokhela, Simiso, additional, Mugerwa, Henry, additional, Ategeka, Gilbert, additional, Cresswell, Fiona, additional, Siika, Abraham, additional, Kosgei, Josphat, additional, Shah, Reena, additional, Naidoo, Logashvari, additional, Opiyo, Kimton, additional, Otike, Caroline, additional, Möller, Karlien, additional, Kaimal, Arvind, additional, Wambui, Charity, additional, Van Eygen, Veerle, additional, Mohammed, Perry, additional, Addo Boateng, Fafa, additional, Paton, Nicholas I, additional, Tamale, William, additional, Yiga, Joshua, additional, Asaasira, Susan Esther, additional, Kinyera, Nigel, additional, Nambi, Christine, additional, Nakiboneka, Dridah Luyirika, additional, Kabatana, Rose, additional, Kiyimba, Winfred, additional, Yawe, Ibrahim, additional, Alinaitwe, Adolf, additional, Zawedde, Aidah, additional, Wasswa, George, additional, Arinda, Allan, additional, Rweyora, Angela, additional, Kangah, Mary Goretti, additional, Castelnuovo, Barbara, additional, Ogwal, Patience, additional, Muhumuza, Neville, additional, Okwero, Max, additional, Ayebare, Peruth, additional, Nakate, Vivian, additional, Asienzo, Jesca, additional, Mayanja, Hamza, additional, Laker, Eva, additional, Riunga, Felix, additional, Onyango, Peter Odhiambo, additional, Wanja, Josephine, additional, Sayed, Shaheen, additional, Gohil, Jaimini, additional, Mungathia, Isaiah, additional, Githuka, Alfred Mburu, additional, Kibwage, Haron, additional, Siika, Abraham Mosigisi, additional, Wambui, Charity Kanyoro, additional, Kirui, Viola Cherotich, additional, Kipyego, Jairus, additional, Sang, Natalie, additional, Mokaya, Martha Mokeira Bisieri, additional, Chepkorir, Consolata, additional, Mboya, Chris Sande, additional, Tonui, Ronald, additional, Njulu, Florence, additional, Kaziga, Hilda, additional, Sawe, Fredrick, additional, Omol, Magdaline Adhiambo, additional, Riziki, Faith, additional, Daud, Ibrahim, additional, Kimetto, Leelgo, additional, Okumu, Billy Omalla, additional, Lipuku, Francis, additional, Venter, Francois, additional, Moller, Karlien, additional, Nzuza, Nompumelelo, additional, Ramela, Gontse, additional, Tom, Noxolo, additional, Nyamuzihwa, Tsitsi, additional, Macholo, Philadelphia, additional, Macebele, Hlamulani, additional, Akpomiemie, Godspower, additional, Jeenarain, Nitesha, additional, Hurbans, Nivriti, additional, Reddy, Mayuri, additional, Mphisa, Gerald Thsepo, additional, Kityo, Cissy, additional, Paton, Nicholas, additional, Mambule, Ivan Kiggundu, additional, Kabanyoro, Ritah, additional, Sekajja, Francis, additional, Nantumbwe, Sandra, additional, Sekabira, Harriet, additional, Ocitti, Paul, additional, Ouma, Benson, additional, Nankya, Immaculate, additional, Ainembabazi, Pamela, additional, Lötter, Melissa, additional, Mohamed, Saeeda, additional, Herbst, Madel, additional, Peters, Tarryn, additional, Mehta, Heena, additional, Khan, Shaguftha, additional, Kruger, Marlien, additional, van Rein-van der Horst, Willemijn, additional, Van Solingen, Rodica, additional, Vandermeulen, Kati, additional, Crauwels, Herta, additional, Luo, Donghan, additional, Votto, Donna, additional, Idahosa, Awhonukeh, additional, Mwendia, Fridah, additional, Klasko-Foster, Lynne, additional, Bondal, Malavika, additional, Eshun-Wilsonova, Ingrid, additional, Spreen, William, additional, D'Amico, Ronald, additional, Kaleebu, Pontiano, additional, Ojoo, Sylvia, additional, Katana, Milly, additional, Moosa, Yunus, additional, Phiri, Sam, additional, Munderi, Paula, additional, and Hill, Andrew, additional
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- 2024
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28. Microbial coinfections and superinfections in critical COVID-19: a Kenyan retrospective cohort analysis
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Rakiro, Joe, Shah, Jasmit, Waweru-Siika, Wangari, Wanyoike, Ivy, and Riunga, Felix
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- 2021
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29. A Markov Decision Process Model to Guide Treatment of Abdominal Aortic Aneurysms
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Mattila, Robert, Siika, Antti, Roy, Joy, and Wahlberg, Bo
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Computer Science - Systems and Control ,Quantitative Biology - Other Quantitative Biology - Abstract
An abdominal aortic aneurysm (AAA) is an enlargement of the abdominal aorta which, if left untreated, can progressively widen and may rupture with fatal consequences. In this paper, we determine an optimal treatment policy using Markov decision process modeling. The policy is optimal with respect to the number of quality adjusted life-years (QALYs) that are expected to be accumulated during the remaining life of a patient. The new policy takes into account factors that are ignored by the current clinical policy (e.g. the life-expectancy and the age-dependent surgical mortality). The resulting optimal policy is structurally different from the current policy. In particular, the policy suggests that young patients with small aneurysms should undergo surgery. The robustness of the policy structure is demonstrated using simulations. A gain in the number of expected QALYs is shown, which indicates a possibility of improved care for patients with AAAs., Comment: This is an extended version of the work presented at the 2016 IEEE Conference on Control Applications (CCA 2016)
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- 2016
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30. Limb Graft Occlusion Following Endovascular Aneurysm Repair for Infrarenal Abdominal Aortic Aneurysm with the Zenith Alpha, Excluder, and Endurant Devices: a Multicentre Cohort Study
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Bogdanovic, Marko, Stackelberg, Otto, Lindström, David, Ersryd, Samuel, Andersson, Manne, Roos, Håkan, Siika, Antti, Jonsson, Magnus, and Roy, Joy
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- 2021
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31. Types and Outcomes of Arrhythmias in a Cardiac Care Unit in Western Kenya: A Prospective Study
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Joan Kiyeng, Constantine Akwanalo, Wilson Sugut, Felix Barasa, Ann Mwangi, Benson Njuguna, Abraham Siika, and Rajesh Vedanthan
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arrhythmias ,atrial fibrillation ,cardiac care unit ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: Sustained arrhythmias are frequently encountered in cardiac care units (CCU), but their types and outcomes in Africa are unknown. Studies from high-income countries suggest arrhythmias are associated with worse outcomes. Objectives: To determine the types and proportion of cardiac arrhythmias among patients admitted to the CCU at Moi Teaching and Referral Hospital (MTRH), and to compare 30-day outcomes between patients with and without arrhythmias at the time of CCU admission. Methods: We conducted a prospective study of a cohort of all patients admitted to MTRH-CCU between March and December 2021. They were stratified on the presence or absence of arrhythmia at the time of CCU admission, irrespective of whether it was the primary indication for CCU care or not. Clinical characteristics were collected using a structured questionnaire. Participants were followed up for 30 days. The primary outcome of interest was 30-day all-cause mortality. Secondary outcomes were 30-day all-cause readmission and length of hospital stay. The 30-day outcomes were compared between the patients with and without arrhythmia, with a p value < 0.05 being considered statistically significant. Results: We enrolled 160 participants. The median age was 46 years (IQR 31, 68), and 95 (59.4%) were female. Seventy (43.8%) had a diagnosis of arrhythmia at admission, of whom 62 (88.6%) had supraventricular tachyarrhythmias, five (7.1%) had ventricular tachyarrhythmias, and three (4.3%) had bradyarrhythmia. Atrial fibrillation was the most common supraventricular tachyarrhythmia (82.3%). There was no statistically significant difference in the primary outcome of 30-day mortality between those who had arrhythmia at admission versus those without: 32.9% versus 30.0%, respectively (p = 0.64). Conclusion: Supraventricular tachyarrhythmias were common in critically hospitalized cardiac patients in Western Kenya, with atrial fibrillation being the most common. Thirty-day all-cause mortality did not differ significantly between the group admitted with a diagnosis of arrhythmia and those without.
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- 2023
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32. Geometric and biomechanical modeling aided by machine learning improves the prediction of growth and rupture of small abdominal aortic aneurysms
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Moritz Lindquist Liljeqvist, Marko Bogdanovic, Antti Siika, T. Christian Gasser, Rebecka Hultgren, and Joy Roy
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Medicine ,Science - Abstract
Abstract It remains difficult to predict when which patients with abdominal aortic aneurysm (AAA) will require surgery. The aim was to study the accuracy of geometric and biomechanical analysis of small AAAs to predict reaching the threshold for surgery, diameter growth rate and rupture or symptomatic aneurysm. 189 patients with AAAs of diameters 40–50 mm were included, 161 had undergone two CTAs. Geometric and biomechanical variables were used in prediction modelling. Classifications were evaluated with area under receiver operating characteristic curve (AUC) and regressions with correlation between observed and predicted growth rates. Compared with the baseline clinical diameter, geometric-biomechanical analysis improved prediction of reaching surgical threshold within four years (AUC 0.80 vs 0.85, p = 0.031) and prediction of diameter growth rate (r = 0.17 vs r = 0.38, p = 0.0031), mainly due to the addition of semiautomatic diameter measurements. There was a trend towards increased precision of volume growth rate prediction (r = 0.37 vs r = 0.45, p = 0.081). Lumen diameter and biomechanical indices were the only variables that could predict future rupture or symptomatic AAA (AUCs 0.65–0.67). Enhanced precision of diameter measurements improves the prediction of reaching the surgical threshold and diameter growth rate, while lumen diameter and biomechanical analysis predicts rupture or symptomatic AAA.
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- 2021
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33. Safe Thrombolysis During Pregnancy for Recurrent Acute Ischaemic Stroke Due to Concomitant Isolated Left Ventricular Non-Compaction and Bilateral Foetal Posterior Communicating Arteries
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Juma FO, Ngunga LM, Waweru-Siika W, and Sokhi DS
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left ventricular non-compaction ,ischaemic stroke ,stroke in pregnancy ,foetal posterior communicating artery ,Medicine (General) ,R5-920 - Abstract
Fatimah Osman Juma, Leonard Mzee Ngunga, Wangari Waweru-Siika, Dilraj Singh Sokhi Department of Medicine, Faculty of Health Sciences, Aga Khan University Medical College of East Africa, Nairobi, KenyaCorrespondence: Dilraj Singh SokhiAga Khan University Medical College of East Africa, Nairobi Campus, Room 405, 4th Floor East Tower Block, Third Avenue Parklands, P.O. Box 30270, Nairobi, 00100, GPO, KenyaTel +254 710 559 541Email Dilraj.Sokhi@aku.eduAbstract: Isolated left ventricular non-compaction (ILVNC) is a rare congenital cardiomyopathy and is associated with arrhythmias, heart failure and thromboembolism including ischaemic stroke. Pregnancy is a relative contraindication to thrombolysis for acute ischaemic stroke, although case reports suggest the treatment can be given in selected cases. We report a case of recurrent cryptogenic strokes in a 36-year-old female who was thrombolysed with good outcome at 37 weeks’ gestation and was eventually found to have ILVNC as the cause. She had a predilection to recurrent posterior circulatory strokes due to foetal posterior communicating arteries. To our knowledge this is the first case report of safe thrombolysis for acute ischaemic stroke in pregnancy caused by ILVNC.Keywords: left ventricular non-compaction, ischaemic stroke, stroke in pregnancy, foetal posterior communicating artery
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- 2021
34. Implementing enhanced patient care to promote patient engagement in HIV care in a rural setting in Kenya
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Juddy Wachira, Becky Genberg, Diana Chemutai, Ann Mwangi, Omar Galarraga, Siika Abraham, and Ira Wilson
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Patient engagement ,Implementation ,Adaptation ,HIV care ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Patient engagement is effective in promoting adherence to HIV care. In an effort to promote patient-centered care, we implemented an enhanced patient care (EPC) intervention that addresses a combination of system-level barriers including provider training, continuity of clinician-patient relationship, enhanced treatment dialogue and better clinic scheduling. We describe the initial implementation of the EPC intervention in a rural HIV clinic in Kenya, and the factors that facilitated its implementation. Methods The intervention occurred in one of the rural Academic Model Providing Healthcare (AMPATHplus) health facilities in Busia County in the western region of Kenya. Both qualitative and quantitative data were collected through training and meeting proceedings/minutes, a patient tracking tool, treatment dialogue and a peer confirmation tool. Qualitative data were coded and emerging themes on the implementation and adaptation of the intervention were developed. Descriptive analysis including percentages and means were performed on the quantitative data. Results Our analysis identified four key factors that facilitated the implementation of this intervention. (1) The smooth integration of the intervention as part of care that was facilitated by provider training, biweekly meetings between the research and clinical team and having an intervention that promotes the health facility agenda. (2) Commitment of stakeholders including providers and patients to the intervention. (3) The adaptability of the intervention to the existing context while still maintaining fidelity to the intervention. (4) Embedding the intervention in a facility with adequate infrastructure to support its implementation. Conclusions This analysis demonstrates the value of using mixed methods approaches to study the implementation of an intervention. Our findings emphasize how critical local support, local infrastructure, and effective communication are to adapting a new intervention in a clinical care program.
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- 2021
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35. Building focused cardiac ultrasound capacity in a lower middle-income country: A single centre study to assess training impact
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Waweru-Siika, Wangari, Barasa, Anders, Wachira, Benjamin, Nekyon, David, Karau, Barbara, Juma, Fatimah, Wanjiku, Grace, Otieno, Harun, Bloomfield, Gerald S., and Sloth, Erik
- Published
- 2020
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36. Fibrolytic enzyme treatment prior to ensiling increased press-juice and crude protein yield from grass silage
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Rinne, Marketta, Winquist, Erika, Pihlajaniemi, Ville, Niemi, Piritta, Seppälä, Arja, and Siika-aho, Matti
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- 2020
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37. An African Perspective on Publication of Postgraduate Residents’ Dissertation: A qualitative study exploring residents’ research experiences, barriers to publication and strategies to improve publication rates from Kenyan medical residents
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Macharia, Brigette, primary, Kamya, Dorothy, additional, Waweru-Siika, Wangari, additional, and Kathomi, Caroline, additional
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- 2024
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38. Peak wall rupture index is associated with risk of rupture of abdominal aortic aneurysms, independent of size and sex
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Siika, Antti, primary, Talvitie, Mareia, additional, Lindquist Liljeqvist, Moritz, additional, Bogdanovic, Marko, additional, Gasser, T Christian, additional, Hultgren, Rebecka, additional, and Roy, Joy, additional
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- 2024
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39. Editorial: Critical care applications: bridging high, medium and low-income settings
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Pisani, Luigi, primary, Siika, Wangari Waweru, additional, and Hashmi, Madiha, additional
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- 2024
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40. Evaluating the Impact of a HIV Low-Risk Express Care Task-Shifting Program: A Case Study of the Targeted Learning Roadmap
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Tran, Linh, Yiannoutsos, Constantin T, Musick, Beverly S, Wools-Kaloustian, Kara K, Siika, Abraham, Kimaiyo, Sylvester, van der Laan, Mark J, and Petersen, Maya
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Economics ,Applied Economics ,Health Sciences ,Clinical Research ,Infection ,causal estimation ,causal inference ,causal road map ,semiparametric models ,targeted learning - Abstract
In conducting studies on an exposure of interest, a systematic roadmap should be applied for translating causal questions into statistical analyses and interpreting the results. In this paper we describe an application of one such roadmap applied to estimating the joint effect of both time to availability of a nurse-based triage system (low risk express care (LREC)) and individual enrollment in the program among HIV patients in East Africa. Our study population is comprised of 16,513 subjects found eligible for this task-shifting program within 15 clinics in Kenya between 2006 and 2009, with each clinic starting the LREC program between 2007 and 2008. After discretizing follow-up into 90-day time intervals, we targeted the population mean counterfactual outcome (i. e. counterfactual probability of either dying or being lost to follow up) at up to 450 days after initial LREC eligibility under three fixed treatment interventions. These were (i) under no program availability during the entire follow-up, (ii) under immediate program availability at initial eligibility, but non-enrollment during the entire follow-up, and (iii) under immediate program availability and enrollment at initial eligibility. We further estimated the controlled direct effect of immediate program availability compared to no program availability, under a hypothetical intervention to prevent individual enrollment in the program. Targeted minimum loss-based estimation was used to estimate the mean outcome, while Super Learning was implemented to estimate the required nuisance parameters. Analyses were conducted with the ltmle R package; analysis code is available at an online repository as an R package. Results showed that at 450 days, the probability of in-care survival for subjects with immediate availability and enrollment was 0.93 (95% CI: 0.91, 0.95) and 0.87 (95% CI: 0.86, 0.87) for subjects with immediate availability never enrolling. For subjects without LREC availability, it was 0.91 (95% CI: 0.90, 0.92). Immediate program availability without individual enrollment, compared to no program availability, was estimated to slightly albeit significantly decrease survival by 4% (95% CI 0.03,0.06, p
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- 2016
41. Qualitative exploration of perceived benefits of care and barriers influencing HIV care in trans Nzoia, Kenya
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V. Naanyu, J. Ruff, S. Goodrich, T. Spira, M. Bateganya, C. Toroitich-Ruto, B. Otieno-Nyunya, A. M. Siika, and K. Wools-Kaloustian
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HIV care ,Barriers to HIV care ,Focus group discussions ,In-depth interviews ,Kenya ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Substantial efforts have been made to ensure people living with HIV (PLHIV) are linked to and retained in care but many challenges deter care utilization. We report perceived benefits of seeking HIV care and barriers to HIV care that were identified through a formative assessment conducted to advise the development of an alternative care model to deliver antiretroviral treatment therapy (ART) in Trans Nzoia County, Kenya. Methods Data were collected in 2015 through key informant interviews (KIIs), in-depth interviews (IDIs), and focus group discussions (FGDs). The study involved 55 participants of whom 53% were female. Ten KIIs provided community contextual information and viewpoints on the HIV epidemic in Trans Nzoia County while 20 PLHIV (10 male and 10 female) participated in IDIs. Twenty-five individuals living with HIV participated in four FGDs - two groups for men and two for women. Key informants were purposively selected, while every third patient above 18 years at the Kitale HIV Clinic was invited to share their HIV care experience through IDIs or FGDs. Trained research assistants moderated all sessions and audio recordings were transcribed and analyzed thematically. Results Findings showed that PLHIV in Trans Nzoia County used both conventional and complementary alternative care for HIV; however, public health facilities were preferred. Popular perceived benefits of adopting care were relief from symptoms and the chance to live longer. Benefits of care uptake included weight gain, renewed energy, and positive behavior change. Individual-level barriers to HIV care included lack of money and food, use of alternative care, negative side effects of ART, denial, and disclosure difficulties. At the community level, stigma, limited social support for conventional HIV treatment, and poor means of transport were reported. The health system barriers were limited supplies and staff, long distance to conventional HIV care, and unprofessional providers. Conclusions Diverse individual, community and health system barriers continue to affect HIV care-seeking efforts in Kenya. Appreciation of context and lived experiences allows for development of realistic care models.
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- 2020
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42. Comparison of pretreatments and cost-optimization of enzymatic hydrolysis for production of single cell protein from grass silage fibre
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Pihlajaniemi, Ville, Ellilä, Simo, Poikkimäki, Sakari, Nappa, Marja, Rinne, Marketta, Lantto, Raija, and Siika-aho, Matti
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- 2020
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43. The history of critical care in Kenya
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Waweru-Siika, Wangari, Mung'ayi, Vitalis, Misango, David, Mogi, Andrea, Kisia, Alan, and Ngumi, Zipporah
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- 2020
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44. Impact of an Enhanced Patient Care Intervention on Viral Suppression Among Patients Living With HIV in Kenya
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Wachira, Juddy, Genberg, Becky, Mwangi, Ann, Chemutai, Diana, Braitstein, Paula, Galarraga, Omar, Siika, Abraham, and Wilson, Ira
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- 2022
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45. Peak wall rupture index is associated with risk of rupture of abdominal aortic aneurysms, independent of size and sex
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Siika, Antti, Talvitie, Mareia, Lindquist Liljeqvist, Moritz, Bogdanovic, Marko, Gasser, T. Christian, Hultgren, Rebecka, Roy, Joy, Siika, Antti, Talvitie, Mareia, Lindquist Liljeqvist, Moritz, Bogdanovic, Marko, Gasser, T. Christian, Hultgren, Rebecka, and Roy, Joy
- Abstract
Background: Information on the predictive determinants of abdominal aortic aneurysm rupture from CT angiography are scarce. The aim of this study was to investigate biomechanical parameters in abdominal aortic aneurysms and their association with risk of subsequent rupture. Methods: In this retrospective study, the digital radiological archive was searched for 363 patients with ruptured abdominal aortic aneurysms. All patients who underwent at least one CT angiography examination before aneurysm rupture were included. CT angiography results were analysed to determine maximum aneurysm diameter, aneurysm volume, and biomechanical parameters (peak wall stress and peak wall rupture index). In the primary survival analysis, patients with abdominal aortic aneurysms less than 70mm were considered. Sensitivity analyses including control patients and abdominal aortic aneurysms of all sizes were performed. Results: A total of 67 patients who underwent 109 CT angiography examinations before aneurysm rupture were identified. The majority were men (47, 70%) and the median age at the time of CTA examination was 77 (71-83) years. The median maximum aneurysm diameter was 56 (interquartile range 46-65) mm and the median time to rupture was 2.13 (interquartile range 0.64-4.72) years. In univariable analysis, maximum aneurysm diameter, aneurysm volume, peak wall stress, and peak wall rupture index were all associated with risk of rupture. Women had an increased HR for rupture when adjusted for maximum aneurysm diameter or aneurysm volume (HR 2.16, 95% c.i. 1.23 to 3.78 (P = 0.007) and HR 1.92, 95% c.i. 1.06 to 3.50 (P = 0.033) respectively). In multivariable analysis, the peak wall rupture index was associated with risk of rupture. The HR for peak wall rupture index was 1.05 (95% c.i. 1.03 to 1.08) per % (P < 0.001) when adjusted for maximum aneurysm diameter and 1.05 (95% c.i. 1.02 to 1.08) per % (P < 0.001) when adjusted for aneurysm volume. Conclusion: Biomechanical factors a, QC 20240612
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- 2024
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46. Implementation of Fingerprint Technology for Unique Patient Matching and Identification at an HIV Care and Treatment Facility in Western Kenya: Cross-sectional Study
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Noah Kasiiti Jaafa, Benard Mokaya, Simon Muhindi Savai, Ada Yeung, Abraham Mosigisi Siika, and Martin Were
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundUnique patient identification remains a challenge in many health care settings in low- and middle-income countries (LMICs). Without national-level unique identifiers for whole populations, countries rely on demographic-based approaches that have proven suboptimal. Affordable biometrics-based approaches, implemented with consideration of contextual ethical, legal, and social implications, have the potential to address this challenge and improve patient safety and reporting accuracy. However, limited studies exist to evaluate the actual performance of biometric approaches and perceptions of these systems in LMICs. ObjectiveThe aim of this study is to evaluate the performance and acceptability of fingerprint technology for unique patient matching and identification in the LMIC setting of Kenya. MethodsIn this cross-sectional study conducted at an HIV care and treatment facility in Western Kenya, an open source fingerprint application was integrated within an implementation of the Open Medical Record System, an open source electronic medical record system (EMRS) that is nationally endorsed and deployed for HIV care in Kenya and in more than 40 other countries; hence, it has potential to translate the findings across multiple countries. Participants aged >18 years were conveniently sampled and enrolled into the study. Participants’ left thumbprints were captured and later used to retrieve and match records. The technology’s performance was evaluated using standard measures: sensitivity, false acceptance rate, false rejection rate, and failure to enroll rate. The Wald test was used to compare the accuracy of the technology with the probabilistic patient-matching technique of the EMRS. Time to retrieval and matching of records were compared using the independent samples 2-tailed t test. A survey was administered to evaluate patient acceptance and satisfaction with use of the technology. ResultsIn all, 300 participants were enrolled; their mean age was 36.3 (SD 12.2) years, and 58% (174/300) were women. The relevant values for the technology’s performance were sensitivity 89.3%, false acceptance rate 0%, false rejection rate 11%, and failure to enroll rate 2.3%. The technology’s mean record retrieval speed was 3.2 (SD 1.1) seconds versus 9.5 (SD 1.9) seconds with demographic-based record retrieval in the EMRS (P
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- 2021
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47. Acinetobacter infections: a retrospective study to determine inhospital mortality rate and clinical factors associated with mortality
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Patel, R.V., Shah, J.S., Revathi, G., Siika, W., and Shah, R.
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- 2019
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48. Essential Emergency and Critical Care: a consensus among global clinical experts
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Samuel Akech, Mike English, Thomas G Weiser, Adam D Laytin, Niranjan Kissoon, Jaran Eriksen, Lovenish Bains, Fred Bulamba, Claudia Hanson, Maria Jirwe, Jolene Moore, Mpoki Ulisubisya, Vincent Ioos, Kent Doi, Lee A Wallis, Tom Bashford, Kapil Dev Soni, Nobhojit Roy, Franco Diaz, Mulinda Nyirenda, Nicholas Risko, Hendry R Sawe, Jacob McKnight, Alexandra Wharton-Smith, Jamie Rylance, Monty Khajanchi, Gavin Wooldridge, Emmanuel Fru Nsutebu, Lisa Kurland, Peter Baker, John C Marshall, Kathryn Rowan, Usha Lalla, Balasubramanian Venkatesh, Cornelius Sendagire, Neill KJ Adhikari, Tim Baker, Brian Rice, Josephine Langton, Elisabeth Riviello, Fiona Muttalib, Francis Mupeta, Jacquie Oliwa, Stefan Swartling Peterson, Andrew G Smith, Lorna Guinness, Megan Cox, Wim Van Damme, John Kellett, Elizabeth M Molyneux, Richard Venn, Andrea B Pembe, Mervyn Mer, Ignacio Martin-Loeches, Raymond Towey, Lina Zhang, Blaise Pascal, Hiral A Shah, Carl Otto Schell, Karima Khalid, Paul D Sonenthal, Alex Sanga, Raphael K. Kayambankadzanja, Adam Asghar, Adrian J Holloway, Ahmed Rhassane El Adib, Alexia Michaelides, Alvaro Coronado Munoz, Amos Muzuka, Analía Fernández, Andreas Wellhagen, Anita Gadgil, Anna Hvarfner, Anuja Abayadeera, Asya Agulnik, Aurélie Godard, Bargo Mahamat Yousif, Bhakti Sarang Ben Morton, Bharath Kumar, Tirupakuzhi Vijayaraghavan, Bobby King, C Louise Thwaites, Chian Wern Tai, Christian Owoo, Dan Brun Petersen, Daniel Tatay, David Lee Skinner, Denis Kinyua, Dhruva Ghosh, Diptesh Aryal, Donald Mlombwa, Duyen Thi, Hanh Bui, Edwin R Lugazia, Ellena Heyns, Erika Montalvo, Ernesto Gerardo Moreno, Esther Banda Kanyangira, Furaha Nzanzu, Gibonce Mwakisambwe, Guy A Richards, Hala Ammar, Halinder S Mangat, Hasanein H Ghali, Hoi Ping Shum, Ibrahim Salim Abdullahi, Ingrid T von der Osten, James S Lee, Jane Kasozi Namagga, Jasmine Armour-Marshall, John Z Metcalfe, Jonas Blixt, Juan Gutierrez Mejia, Juan Ignacio Silesky-Jiménez, Karl Martin Kohne, Kazuhiro Yokobatake, Kristina E. Rudd, Kwame Asante Akuamoah-Boateng, Lars Irestedt, Lia I Losonczy, Margaret Nyaika, Markus Castegren, Matthew Loftus, Matti Reinikainen, Michael Jaung, Michael S Lipnick, Miklos Lipcey, Märit Amanda Halmin, Naman Shah, Natalie L Cobb, Nathan D Nielsen, Neville Vlok, Ntogwiachu Daniel Kobuh, Oscar Fernández Rostello, Patricia Duque, Paul Patrick Mwasapi, Petronella Bjurling-Sjöberg, Piedad Sarmiento, Pryanka Relan, Rebecca Silvers, Rehema Mlay, Rich Branson, Richard J Wang, Richard Kojan, Richard Peter Von Rahden, Rob Mac Sweeney, Rodrigo Genaro Arduini, Rodwell Gundo, Ruyumbu Sixtus, Samson Kwazizira Mndolo, Shada A. Rouhani, Siriel Nanzia Massawe, Steven A Webb, Sunkaru Touray, Susana Guido, Teresa Kortz, Theodoros Aslanidis, Traci A Wolbrink, V Theodore Barnett, Vijay Christopher Kannan, Waleed S Eldebsy, Wangari Waweru-Siika, Wezzie Kumwenda Mwafulirwa, William Obeng, Yasein Omer, and Zione Banda
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Medicine (General) ,R5-920 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background Globally, critical illness results in millions of deaths every year. Although many of these deaths are potentially preventable, the basic, life-saving care of critically ill patients are often overlooked in health systems. Essential Emergency and Critical Care (EECC) has been devised as the care that should be provided to all critically ill patients in all hospitals in the world. EECC includes the effective care of low cost and low complexity for the identification and treatment of critically ill patients across all medical specialties. This study aimed to specify the content of EECC and additionally, given the surge of critical illness in the ongoing pandemic, the essential diagnosis-specific care for critically ill patients with COVID-19.Methods In a Delphi process, consensus (>90% agreement) was sought from a diverse panel of global clinical experts. The panel iteratively rated proposed treatments and actions based on previous guidelines and the WHO/ICRC’s Basic Emergency Care. The output from the Delphi was adapted iteratively with specialist reviewers into a coherent and feasible package of clinical processes plus a list of hospital readiness requirements.Results The 269 experts in the Delphi panel had clinical experience in different acute medical specialties from 59 countries and from all resource settings. The agreed EECC package contains 40 clinical processes and 67 requirements, plus additions specific for COVID-19.Conclusion The study has specified the content of care that should be provided to all critically ill patients. Implementing EECC could be an effective strategy for policy makers to reduce preventable deaths worldwide.
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- 2021
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49. Renal events among women treated with tenofovir/emtricitabine in combination with either lopinavir/ritonavir or nevirapine
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Mwafongo, Albert, Nkanaunena, Kondwani, Zheng, Yu, Hogg, Evelyn, Samaneka, Wadzanai, Mulenga, Lloyd, Siika, Abraham, Currier, Judith, Lockman, Shahin, Hughes, Michael D, and Hosseinipour, Mina
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Biomedical and Clinical Sciences ,Clinical Sciences ,Kidney Disease ,Sexually Transmitted Infections ,Clinical Trials and Supportive Activities ,Infectious Diseases ,HIV/AIDS ,Clinical Research ,Renal and urogenital ,Infection ,Good Health and Well Being ,Adenine ,Adult ,Antiviral Agents ,Creatinine ,Deoxycytidine ,Drug Therapy ,Combination ,Emtricitabine ,Female ,HIV Infections ,HIV Protease Inhibitors ,HIV-1 ,Humans ,Kidney Diseases ,Lopinavir ,Nevirapine ,Organophosphonates ,RNA ,Viral ,Reverse Transcriptase Inhibitors ,Ritonavir ,Tenofovir ,Treatment Outcome ,nevirapine ,lopinavir/ritonavir ,renal insufficiency ,tenofovir ,AIDS Clinical Trial Group (ACTG) A5208 Team ,Biological Sciences ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Virology ,Biomedical and clinical sciences ,Health sciences - Abstract
ObjectivesTenofovir disoproxil fumarate (TDF) has been associated with renal insufficiency. Co-administration with boosted protease inhibitors, which increases its exposure, may further increase the risk of renal insufficiency.MethodsWe compared the incidence of renal events among women taking TDF co-administered with lopinavir/ritonavir (LPV/r) versus those co-administering TDF with nevirapine (NVP). Renal events were defined as a confirmed drop in creatinine clearance associated with a serum creatinine grade 2 or higher, or that leading to treatment modification.ResultsOverall, 741 HIV-infected women were enrolled into the study. Of these, 24 (3.2%) had reportable renal events (18 in LPV/r arm, six in NVP arm). In multivariate analysis, renal events were significantly associated with the LPV/r arm [odds ratio (OR) 3.12, 95% confidence interval (CI) 1.21, 8.05; P = 0.019], baseline HIV-1 RNA (OR 2.65, 95% CI 1.23, 5.69 per 1 log10 copies/ml higher; P = 0.013) and baseline creatinine clearance (OR 0.83, 95% CI 0.70-0.98 per 10 ml/min higher; P = 0.030). In multivariate analysis evaluating renal events requiring treatment modification, only baseline HIV-1 RNA and creatinine clearance were significantly associated (OR 4.41, 95% CI 1.65, 11.78 per 1 log10 copies/ml higher; P = 0.003 and OR 0.80, 95% CI 0.64, 0.99 per 10 ml/min higher; P = 0.040, respectively).ConclusionThe rates of renal events were relatively low in the two treatment arms. However, patients taking TDF co-administered with LPV/r had significantly more renal events compared to those co-administered with NVP. Furthermore, higher baseline HIV RNA and lower creatinine clearance were associated with the development of renal insufficiency requiring treatment modification.
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- 2014
50. PA-257 ‘Nothing about us without us’: multi-country adolescent patient-led recruitment information in the long-acting treatment in adolescents (LATA) trial – an animated video to compliment ‘traditional’ participant information
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Conway, Magda, primary, Jafta, Lungile, additional, Shibemba, Mercy, additional, South, Annabelle, additional, Kityo, Cissy, additional, Bwakura-Dangarembizi, Mutsa, additional, Siika, Abraham, additional, Archary, Mo, additional, Akabwai, George, additional, Okello, Resty Babirye, additional, Mugerwa, Henry, additional, Nathoo, Kusum, additional, Mujuru, Hilda, additional, Chidziva, Ennie, additional, Bhiri, Joyline, additional, Nyandiko, Winstone, additional, Kirui, Viola, additional, Kiilu, C, additional, Mosia, R, additional, Mngqbisa, Rosie, additional, Ngwenya, Nothando, additional, Seunanden, Tamlyn, additional, Namukwaya, Stella, additional, Seeley, Janet, additional, Apoto, Naomi, additional, Thomason, Margaret, additional, Bush, Molly, additional, Dodds, Becky, additional, Ford, Debbie, additional, Pett, Sarah, additional, and Kekitiinwa-Rukyalekere, Adeodata, additional
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- 2023
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