119 results on '"Shuji Ikeda"'
Search Results
2. A case of uterine adenomyoma of endocervical type that was suspected as minimal deviation adenocarcinoma on biopsy, MRI findings, and literature review
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Takahiro Yamamoto, MD, Yu Koshikawa, MD, Mayako Yamaji, MD, PhD, Shuji Ikeda, MD, PhD, Ayaka Ishikawa, MD, PhD, Akihiko Wakatsuki, MD, PhD, Akira Satou, MD, PhD, and Kojiro Suzuki, MD, PhD
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Uterine adenomyomas of endocervical type ,Minimal deviation adenocarcinoma ,MRI ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Uterine adenomyomas of endocervical type are rare benign tumors of the uterine cervix commonly presented as cyst-like, dilated glandular structures within polypoid masses. A premenopausal woman in her 50s was referred to our hospital because of an increasing watery vaginal discharge. A multifocal cyst measuring 5 × 4.5 cm in size projecting into the endocervical canal was revealed on a contrast-enhanced MRI. The fluid within the tumor showed a hypointense signal on T1-weighted imaging (T1WI) and a hyperintense signal on T2-weighted imaging (T2WI). On T2WI, most of the septa within the tumor showed a slightly hyperintense to hypointense signal, whereas some areas revealed a strong hypointense signal; the contrast effect on the septum was satisfactory. On the T2WI taken 2 years previously, the tumor was a 4.5 × 3.5 cm polypoid mass protruding from the posterior endocervical wall. Contrastingly, the current T2WI showed that the stem was no longer identifiable because of tumor growth. Because previous imaging showed that the tumor was a stalked tumor protruding from the posterior endocervical wall, the imaging diagnosis was uterine adenomyoma of the endocervical type. A biopsy suggested the possibility of a minimal deviation adenocarcinoma (MDA). Hence, a total hysterectomy was performed. The final diagnosis confirmed the uterine adenomyoma of endocervical type. Uterine adenomyoma of the endocervical type might be difficult to differentiate from MDA in small biopsy specimens; therefore, evaluation of morphology by MRI is considered important in preoperative diagnosis.
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- 2024
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3. Targeting cis-regulatory elements of FOXO family is a novel therapeutic strategy for induction of leukemia cell differentiation
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Kenta Kurayoshi, Yusuke Takase, Masaya Ueno, Kumiko Ohta, Kyoko Fuse, Shuji Ikeda, Takayoshi Watanabe, Yuki Nishida, Shin-ichi Horike, Kazuyoshi Hosomichi, Yuichi Ishikawa, Yuko Tadokoro, Masahiko Kobayashi, Atsuko Kasahara, Yongwei Jing, Mahmoud I. Shoulkamy, Makiko Meguro-Horike, Kensuke Kojima, Hitoshi Kiyoi, Hiroshi Sugiyama, Hiroki Nagase, Atsushi Tajima, and Atsushi Hirao
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Cytology ,QH573-671 - Abstract
Abstract Differentiation therapy has been proposed as a promising therapeutic strategy for acute myeloid leukemia (AML); thus, the development of more versatile methodologies that are applicable to a wide range of AML subtypes is desired. Although the FOXOs transcription factor represents a promising drug target for differentiation therapy, the efficacy of FOXO inhibitors is limited in vivo. Here, we show that pharmacological inhibition of a common cis-regulatory element of forkhead box O (FOXO) family members successfully induced cell differentiation in various AML cell lines. Through gene expression profiling and differentiation marker-based CRISPR/Cas9 screening, we identified TRIB1, a complement of the COP1 ubiquitin ligase complex, as a functional FOXO downstream gene maintaining an undifferentiated status. TRIB1 is direct target of FOXO3 and the FOXO-binding cis-regulatory element in the TRIB1 promoter, referred to as the FOXO-responsive element in the TRIB1 promoter (FRE-T), played a critical role in differentiation blockade. Thus, we designed a DNA-binding pharmacological inhibitor of the FOXO-FRE-T interface using pyrrole-imidazole polyamides (PIPs) that specifically bind to FRE-T (FRE-PIPs). The FRE-PIPs conjugated to chlorambucil (FRE-chb) inhibited transcription of TRIB1, causing differentiation in various AML cell lines. FRE-chb suppressed the formation of colonies derived from AML cell lines but not from normal counterparts. Administration of FRE-chb inhibited tumor progression in vivo without remarkable adverse effects. In conclusion, targeting cis-regulatory elements of the FOXO family is a promising therapeutic strategy that induces AML cell differentiation.
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- 2023
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4. Granulomatosis with polyangiitis presenting as multiple renal masses: A case report with MRI findings
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Takahiro Yamamoto, MD, Yuki Maruchi, MD, PhD, Ayumi Asai, MD, Yumi Takehara, MD, Yu Koshikawa, MD, Shuji Ikeda, MD, PhD, Keishi Kajikawa, MD, PhD, Shogo Banno, MD, PhD, and Kojiro Suzuki, MD, PhD
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Granulomatosis with polyangiitis ,Renal mass ,MRI ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
It is extremely rare for granulomatosis with polyangiitis to form masses in the kidneys. Magnetic resonance imaging findings of renal masses caused by this disease have been infrequently reported. In this study, we report a case of renal masses caused by granulomatosis with polyangiitis with different findings. While on steroid treatment for a recently diagnosed granulomatosis with polyangiitis, a man in his 60s underwent computed tomography for a hepatic dysfunction. Computed tomography showed incidental findings of a 40 mm × 35 mm mass in the left kidney and two 8 mm × 8 mm masses in the right kidney; all masses were hypovascular. On magnetic resonance imaging, the left renal mass showed a hyperintense signal with slightly hypointense signal rim on T2-weighted imaging. The left renal mass showed a strong hypointense signal where the mass abutted the renal capsule. On diffusion-weighted imaging, the left renal mass showed an isointense signal with a hyperintense signal rim. Both right renal masses showed an isointense signal with slightly hypointense signal rim on T2-weighted imaging and hyperintense signal on diffusion-weighted imaging. Suspecting renal masses caused by the disease, the patient was then treated with steroids and methotrexate. After 6 months of treatment, both right renal masses resolved; however, the left renal mass shrank but abnormal signal remained. Based on the treatment course, it is conceivable that the renal masses were caused by granulomatosis with polyangiitis.
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- 2023
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5. A RUNX-targeted gene switch-off approach modulates the BIRC5/PIF1-p21 pathway and reduces glioblastoma growth in mice
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Etsuko Yamamoto Hattori, Tatsuya Masuda, Yohei Mineharu, Masamitsu Mikami, Yukinori Terada, Yasuzumi Matsui, Hirohito Kubota, Hidemasa Matsuo, Masahiro Hirata, Tatsuki R. Kataoka, Tatsutoshi Nakahata, Shuji Ikeda, Susumu Miyamoto, Hiroshi Sugiyama, Yoshiki Arakawa, and Yasuhiko Kamikubo
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Biology (General) ,QH301-705.5 - Abstract
Interfering with RUNX family proteins reduces glioblastoma growth in mice and reveals pathways involved in the maintenance of tumour growth.
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- 2022
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6. Author Correction: A RUNX-targeted gene switch-off approach modulates the BIRC5/PIF1-p21 pathway and reduces glioblastoma growth in mice
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Etsuko Yamamoto Hattori, Tatsuya Masuda, Yohei Mineharu, Masamitsu Mikami, Yukinori Terada, Yasuzumi Matsui, Hirohito Kubota, Hidemasa Matsuo, Masahiro Hirata, Tatsuki R. Kataoka, Tatsutoshi Nakahata, Shuji Ikeda, Susumu Miyamoto, Hiroshi Sugiyama, Yoshiki Arakawa, and Yasuhiko Kamikubo
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Biology (General) ,QH301-705.5 - Published
- 2022
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7. Nano-Structure-Controlled Very Low Resistivity Cu Wires Formed by High Purity and Optimized Additives
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Jin Onuki, Kunihiro Tamahashi, Takashi Inami, Takatoshi Nagano, Yasushi Sasajima, and Shuji Ikeda
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High purity electrolyte ,nano-structure controlled Cu wire ,optimized additives ,low resistivity ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Resistivity increase in nano-level Cu wires is becoming a critical issue for high speed ULSIs. We have established a new manufacturing process utilizing very high purity 9N electrolyte and optimized additives to control nano-structures of Cu wires, and we realized Cu wires for practical use with 50% lower resistivity than those made with the conventional process. Using STEM analyses and phase field simulation, we also ascertained the reason for getting the very low resistivity Cu wires.
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- 2018
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8. Editorial for the JEDS Special Issue for EDTM 2021
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Shuji Ikeda, Yi Li, Durga Misra, Arokia Nathan, Bich-Yen Nguyen, Qiming Shao, Charles Surya, Jianshi Tang, Albert Wang, Hitoshi Wakabayashi, Huaqiang Wu, Chen Yang, and Bin Zhao
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Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
This Special Issue of the IEEE Journal of Electron Devices Society is a selection of papers presented at the 2021 IEEE Electron Devices Technology and Manufacturing (EDTM) Conference. Sponsored by IEEE Electron Devices Society (EDS), IEEE EDTM is a premier conference providing a unique forum for discussions on a broad range of device/manufacturing-related topics. EDTM rotates among the hot-hubs of semiconductor manufacturing in Asia. EDTM2021 was successfully held in Chengdu, China, during March 9-12, 2021. The Theme for EDTM2021 was Intelligent Technologies for Smart and Connected Life. Due to the pandemic, EDTM2021 was held in hybrid formats including a large onsite/in-person gathering and a virtual conference. EDTM2021 was a four-day conference comprising a one-day tutorial/short course/workshop event and a three-day technical program including both oral and poster sessions. On Day-1, EDTM2021 was kicked off with two parallel tutorial tracks and four concurrent short course sessions. The two tutorial series focused on “Flexible electronics + Display” and “Future Communication and Computing.” The four short course sessions covered “Advanced Memories and Emerging Applications,” “Quantum Computing Technologies,” “Advanced Processing and Manufacturing” and “Ultra/Wide Bandgap Power Electronics.” Total twelve lectures were given by globally renowned experts. The highlight on Day-1 also includes the “HIR Workshop Organizing Committee” organized by the IEEE Heterogeneous Integration Roadmap Committee and featured by eighteen experts from around the globe discussing the advances, challenges and future of HI technologies. EDTM2021 Technical Program includes six Keynote Speakers talking about various hot topics, including Dr. Haijun Zhao (Co-CEO of SMIC) on “Creating Values through Innovations on Mature Nodes of Technologies of Integrated Circuits,” Prof. Xiang Zhang (President, University of Hong Kong) on “How to build a camera with highest resolution: a photonics perspective,” Mr. Teruo Hirayama (Executive Chief Engineer, Sony Corp.) on “The power of image sensors for innovation,” Prof. Arokia Nathan (University of Cambridge) on “Thin Film Transistor Architectures for Advanced Analog Signal Processing,” Prof. Ru Huang (Vice President, Peking University) on “Ferroelectric-based device: revived as a low-power technology booster for diverse applications” and Dr. Jeff Xu (Director, HiSilicon Research) on “Ubiquitous Computing Drives Future Semiconductor Technology.” The Plenary was closed with a Closing Banquet Speech given by Prof. Ilesanmi Adesida (Provost, Nazabaryev University) entitled “The Development of an International Research University in the Big Steppe of Kazakhstan.” EDTM2021 Technical Program core contains about 289 technical papers accepted after strict peer reviewing, including 172 oral (organized into 36 Sessions) and 117 interactive presentations. EDTM2021 had a total registered attendance of 800+, including 492 for the Technical Program (283 in-person and 209 virtual), 156 for Tutorials and 158 for Short Courses.
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- 2021
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9. Nanochannel-Confined TAMRA-Polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations
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Seonghyun Lee, Yelin Lee, Yongkyun Kim, Cong Wang, Jungyul Park, Gun Young Jung, Yenglong Chen, Rakwoo Chang, Shuji Ikeda, Hiroshi Sugiyama, and Kyubong Jo
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DNA stretching length ,persistence length ,nanochannel ,Organic chemistry ,QD241-441 - Abstract
Large DNA molecules have been utilized as a model system to investigate polymer physics. However, DNA visualization via intercalating dyes has generated equivocal results due to dye-induced structural deformation, particularly unwanted unwinding of the double helix. Thus, the contour length increases and the persistence length changes so unpredictably that there has been a controversy. In this paper, we used TAMRA-polypyrrole to stain single DNA molecules. Since this staining did not change the contour length of B-form DNA, we utilized TAMRA-polypyrrole stained DNA as a tool to measure the persistence length by changing the ionic strength. Then, we investigated DNA stretching in nanochannels by varying the ionic strength from 0.06 mM to 47 mM to evaluate several polymer physics theories proposed by Odijk, de Gennes and recent papers to deal with these regimes.
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- 2018
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10. Non-enzymatic DNA cleavage reaction induced by 5-ethynyluracil in methylamine aqueous solution and application to DNA concatenation.
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Shuji Ikeda, Kazuki Tainaka, Katsuhiko Matsumoto, Yuta Shinohara, Koji L Ode, Etsuo A Susaki, and Hiroki R Ueda
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Medicine ,Science - Abstract
DNA can be concatenated by hybridization of DNA fragments with protruding single-stranded termini. DNA cleavage occurring at a nucleotide containing a DNA base analogue is a useful method to obtain DNA with designed protruding termini. Here, we report a novel non-enzymatic DNA cleavage reaction for DNA concatenation. We found that DNA is cleaved at a nucleotide containing 5-ethynyluracil in a methylamine aqueous solution to generate 5'-phosphorylated DNA fragment as a cleavage product. We demonstrated that the reaction can be applied to DNA concatenation of PCR-amplified DNA fragments. This novel non-enzymatic DNA cleavage reaction is a simple practical approach for DNA concatenation.
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- 2014
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11. Sets of RNA repeated tags and hybridization-sensitive fluorescent probes for distinct images of RNA in a living cell.
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Takeshi Kubota, Shuji Ikeda, Hiroyuki Yanagisawa, Mizue Yuki, and Akimitsu Okamoto
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Medicine ,Science - Abstract
BACKGROUND: Imaging the behavior of RNA in a living cell is a powerful means for understanding RNA functions and acquiring spatiotemporal information in a single cell. For more distinct RNA imaging in a living cell, a more effective chemical method to fluorescently label RNA is now required. In addition, development of the technology labeling with different colors for different RNA would make it easier to analyze plural RNA strands expressing in a cell. METHODOLOGY/PRINCIPAL FINDINGS: Tag technology for RNA imaging in a living cell has been developed based on the unique chemical functions of exciton-controlled hybridization-sensitive oligonucleotide (ECHO) probes. Repetitions of selected 18-nucleotide RNA tags were incorporated into the mRNA 3'-UTR. Pairs with complementary ECHO probes exhibited hybridization-sensitive fluorescence emission for the mRNA expressed in a living cell. The mRNA in a nucleus was detected clearly as fluorescent puncta, and the images of the expression of two mRNAs were obtained independently and simultaneously with two orthogonal tag-probe pairs. CONCLUSIONS/SIGNIFICANCE: A compact and repeated label has been developed for RNA imaging in a living cell, based on the photochemistry of ECHO probes. The pairs of an 18-nt RNA tag and the complementary ECHO probes are highly thermostable, sequence-specifically emissive, and orthogonal to each other. The nucleotide length necessary for one tag sequence is much shorter compared with conventional tag technologies, resulting in easy preparation of the tag sequences with a larger number of repeats for more distinct RNA imaging.
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- 2010
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12. Targeting chemoresistance in Xp11.2 translocation renal cell carcinoma using a novel polyamide-chlorambucil conjugate
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Shintaro Funasaki, Sally Mehanna, Wenjuan Ma, Hidekazu Nishizawa, Yasuhiko Kamikubo, Hiroshi Sugiyama, Shuji Ikeda, Takanobu Motoshima, Hisashi Hasumi, W. Marston Linehan, Laura S. Schmidt, Chris Ricketts, Toshio Suda, Yuichi Oike, Tomomi Kamba, and Masaya Baba
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Cancer Research ,Chromosomes, Human, X ,Nylons ,Oncology ,Basic Helix-Loop-Helix Leucine Zipper Transcription Factors ,Drug Resistance, Neoplasm ,Humans ,Chlorambucil ,General Medicine ,Carcinoma, Renal Cell ,Kidney Neoplasms ,Translocation, Genetic - Abstract
Renal cell carcinoma with Xp11.2 translocation involving the TFE3 gene (TFE3-RCC) is a recently identified subset of RCC with unique morphology and clinical presentation. The chimeric PRCC-TFE3 protein produced by Xp11.2 translocation has been shown to transcriptionally activate its downstream target genes that play important roles in carcinogenesis and tumor development of TFE3-RCC. However, the underlying molecular mechanisms remain poorly understood. Here we show that in TFE3-RCC cells, PRCC-TFE3 controls heme oxygenase 1 (HMOX1) expression to confer chemoresistance. Inhibition of HMOX1 sensitized the PRCC-TFE3 expressing cells to genotoxic reagents. We screened for a novel chlorambucil-polyamide conjugate (Chb) to target PRCC-TFE3-dependent transcription, and identified Chb16 as a PRCC-TFE3-dependent transcriptional inhibitor of HMOX1 expression. Treatment of the patient-derived cancer cells with Chb16 exhibited senescence and growth arrest, and increased sensitivity of the TFE3-RCC cells to the genotoxic reagent etoposide. Thus, our data showed that the TFE3-RCC cells acquired chemoresistance through HMOX1 expression and that inhibition of HMOX1 by Chb16 may be an effective therapeutic strategy for TFE3-RCC.
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- 2022
13. Usefulness of peripherally inserted central catheter port system (PICC-PORT) implantation in the sitting position: a new technique for cases unsuitable for conventional implantation
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Akiko Narita, Yumi Takehara, Yuki Maruchi, Nozomu Matsunaga, Shuji Ikeda, Yuichiro Izumi, Toyohiro Ota, and Kojiro Suzuki
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Catheterization, Central Venous ,Sitting Position ,Catheterization, Peripheral ,Humans ,Central Venous Catheters ,Radiology, Nuclear Medicine and imaging ,Retrospective Studies - Abstract
Purpose Totally implantable central venous access port implantation is typically performed in the supine position. However, some patients cannot adopt the supine position due to severe pain and/or dyspnea. The present study evaluated the technical feasibility of peripherally inserted central catheter port system (PICC-PORT) implantation in the sitting position in such cases. Materials and methods In the sitting position method, PICC-PORT implantation was performed with the patients seated on a videofluoroscopy chair positioned between the limbs of an angiographic C-arm and the operative upper arm positioned on an arm stand. From January 2019 to September 2021, eight patients underwent PICC-PORT implantations using this sitting method. We also evaluated 251 consecutive patients with conventional supine position PICC-PORT implantation as controls. Differences in technical success, procedure time and complications were retrospectively assessed between the two groups. Results Procedural success rates were 100% in both groups. Median procedure times in the sitting and conventional groups were 42 and 44 min, respectively. No complications were observed in the sitting group. There were no significant differences between the two groups in procedure time (p = 0.674) and complications (p = 1.000). Conclusion Implantation of PICC-PORT in the sitting position is technically feasible and useful.
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- 2022
14. Stent graft treatment for coronary sinus hemorrhage associated with esophageal cancer
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Shuji Ikeda, Takahiro Yamamoto, Tsuneo Ishiguchi, Yuichiro Izumi, Makiyo Hagihara, Akiko Narita, Yuki Maruchi, Toyohiro Ota, Akira Kitagawa, and Kojiro Suzuki
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medicine.medical_specialty ,Esophageal Neoplasms ,medicine.medical_treatment ,Hemorrhage ,Blood Vessel Prosthesis Implantation ,03 medical and health sciences ,0302 clinical medicine ,otorhinolaryngologic diseases ,medicine ,Humans ,Vein ,Coronary sinus ,business.industry ,fungi ,Coronary Sinus ,food and beverages ,Stent ,Esophageal cancer ,medicine.disease ,Surgery ,Treatment Outcome ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Female ,Stents ,030211 gastroenterology & hepatology ,business - Abstract
Hemorrhage arising from the coronary sinus is very rare and can be lethal. It has historically been treated surgically. The present patient had coronary sinus rupture secondary to esophageal cancer and an abscess in the pericardium. Due to her poor general status, this patient was contraindicated for surgery and underwent endovascular therapy. The hemorrhage was treated by stent graft deployment and the patient was temporarily discharged. Two months later, CT showed that the stent graft was occluded by thrombosis. The patient died without hemorrhage 2.5 months thereafter.
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- 2020
15. Percutaneous Retrieval of a Misinserted Pigtail Catheter Straightener during Infra-Renal Abdominal Aortic Stenting: A Case Report
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Yusuke Imaeda, Tetsuya Yamada, Tsuneo Ishiguchi, Kojiro Suzuki, Akira Kitagawa, Shuji Ikeda, Toyohiro Ota, Makiyo Hagihara, and Yuichiro Izumi
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medicine.medical_specialty ,Percutaneous ,business.industry ,medicine ,Pigtail catheter ,business ,Surgery - Published
- 2020
16. Tumor Accumulation of PIP-Based KRAS Inhibitor KR12 Evaluated by the Use of a Simple, Versatile Chicken Egg Tumor Model
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Yuya Higashi, Shuji Ikeda, Kotaro Matsumoto, Shinsuke Satoh, Aoi Komatsu, Hiroshi Sugiyama, and Fuyuhiko Tamanoi
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Cancer Research ,Oncology ,CAM assay ,pyrrole-imidazole polyamide ,KRAS inhibitor ,tumor accumulation ,nuclear localization - Abstract
Background: The KRAS inhibitor KR12, based on pyrrole-imidazole polyamide (PIP), has been developed and shown to exhibit efficacy in mouse experiments. Because some PIP species exhibit tumor accumulation capability, we decided to evaluate whether the PIP portion of KR12 exhibits tumor accumulation. We employed the CAM assay that provides a simple method for tumor accumulation evaluation. Methods: KR12 PIP was synthesized and conjugated to TAMRA to produce a fluorescently labeled reagent (KR12-TAMRA). This reagent was injected into a fertilized chicken egg that has been transplanted with human cancer cells. Distribution of the red fluorescence was examined by cutting out tumor as well as various organs from the embryo. Results: The red fluorescence of KR12-TAMRA was found to overlap with the green fluorescence of the tumor formed with GFP-expressing cancer cells. We also observed nuclear localization of KR12-TAMRA. Treatment of KR12 that contained the alkylating agent CBI in the tumor-bearing chicken egg resulted in tumor growth inhibition. Conclusions: KR12 contains a PIP that has two key features: tumor accumulation and nuclear localization. KR12 conjugated with CBI exhibits inhibition of tumor growth in the CAM model.
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- 2022
17. Invited: Smart Silicon Manufacturing Technology, Breakthrough for 150 years of life
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Shuji Ikeda
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- 2021
18. Interventional Radiology for Venous Malformations
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Akiko Narita, Yuichiro Izumi, Makiyo Hagihara, Toyohiro Ota, Nozomu Matsunaga, Kojiro Suzuki, Shuji Ikeda, Akira Kitagawa, and Hiroshi Furukawa
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medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,medicine ,Interventional radiology ,Radiology ,business - Published
- 2019
19. In vitro evaluation of radiopacity of contrast-loaded superabsorbent polymer microspheres (SAP-MS) with static imaging and flow model
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Toyohiro Ota, Mansaku Takeda, Makiyo Hagihara, Kenta Murotani, Akiko Narita, Yuichiro Izumi, Kojiro Suzuki, Takahiro Yamamoto, Akira Kitagawa, Shuji Ikeda, and Tsuneo Ishiguchi
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Materials science ,genetic structures ,Polymers ,medicine.medical_treatment ,Radiodensity ,Radiography ,media_common.quotation_subject ,Contrast Media ,In Vitro Techniques ,Triiodobenzoic Acids ,medicine ,Contrast (vision) ,Radiology, Nuclear Medicine and imaging ,Saline ,media_common ,medicine.diagnostic_test ,business.industry ,Angiography, Digital Subtraction ,Digital subtraction angiography ,Iodixanol ,Microspheres ,Flow velocity ,Superabsorbent polymer ,Saline Solution ,business ,Biomedical engineering ,medicine.drug - Abstract
To evaluate the radiopacity of contrast-loaded superabsorbent polymer microspheres (SAP-MS) under X-ray imaging. SAP-MS were suspended in contrast material (iodixanol) and the diameter change was assessed. The diameter of contrast-loaded SAP-MS in saline was measured sequentially. Radiography of the contrast-loaded SAP-MS was evaluated as radiopacity by contrast-to-noise ratio and visibility by multiple reader scoring. Under digital subtraction angiography, contrast-loaded SAP-MS were injected into a flow model. The flow speed was 1–10 cm/s, and images were acquired at 1–7.5 frames per second using a pulse width of 10–85 ms. Images were assessed by multiple reader scoring. The diameter of SAP-MS increased to 4.0–5.0 times its original size for approximately 15 min. The diameter of contrast-loaded SAP-MS in saline further increased by 10–30% within several minutes and returned to the previous size. Radiopacity and visibility of contrast-loaded SAP-MS decreased in 30 min after mixing with saline. Visibility was better with slow flow speed and narrow pulse width. For effective observation, contrast-loaded SAP-MS should be kept in non-diluted contrast material until use. The conditions of slower flow and use of a narrow pulse width are recommended.
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- 2019
20. Analysis of the Effects of Boron Transient Enhanced Diffusion on Threshold Voltage Mismatch in Steep Retrograde Doping NMOSFETs with Inserted Oxygen Layers
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Hideki Takeuchi, Naoki Ishigami, Toshiro Sakamoto, Robert J. Mears, Atsushi Okamoto, Tsutomu Miyazaki, Shinji Kawaguchi, Shuntaro Fujii, Tatsushi Yagi, Hiu Yung Wong, Soichi Morita, Shohei Hamada, and Shuji Ikeda
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Materials science ,Silicon ,business.industry ,Doping ,chemistry.chemical_element ,Epitaxy ,Threshold voltage ,Atomic layer deposition ,chemistry ,MOSFET ,Optoelectronics ,Diffusion (business) ,business ,Boron - Abstract
Steep retrograde doping devices were fabricated using undoped epitaxial Si channels with inserted oxygen layers. The effects of boron transient enhanced diffusion (TED) on threshold voltage (Vth) mismatch were investigated. Suppression of boron TED was effective for reducing V th mismatch of steep retrograde doping devices as well as flat doping profile devices.
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- 2020
21. Distribution of scatter radiation by C-arm cone-beam computed tomography in angiographic suite: measurement of doses and effectiveness of protection devices
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Mayako, Yamaji, Tsuneo, Ishiguchi, Shuji, Koyama, Shuji, Ikeda, Akira, Kitagawa, Makiyo, Hagihara, Yuji, Itoh, Masaru, Nakamura, Toyohiro, Ota, and Kojiro, Suzuki
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Original Paper ,cone-beam computed tomography ,Phantoms, Imaging ,Humans ,Scattering, Radiation ,Radiation Dosage ,radiation protection ,scatter radiation - Abstract
Distribution of radiation by C-arm cone-beam computed tomography (CBCT) in the angiographic suite and effectiveness of protection devices were assessed. CBCT image of a human phantom was obtained by a rotation of 220 degrees during 8 seconds of exposure. One hundred and twelve dosimeters were placed at different positions around the beam entry site, and color maps of dose distributions were drawn for horizontal and vertical planes. The measurements showed the highest radiation dose over 600 μGy by a single CBCT image acquisition at a distance of 60 cm from the beam entry site and a height of 90 cm from the floor. The color maps demonstrated the dose distribution to be more intense at the bilateral directions of the phantom. With the use of a ceiling-mounted transparent lead-acryl screen and a table-suspended lead curtain, the doses were reduced by 45–92 % at a direction of 210 degrees and a distance of 120 cm.
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- 2020
22. A synthetic transcription factor pair mimic for precise recruitment of an epigenetic modifier to the targeted DNA locus
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Sefan Asamitsu, Hiroshi Sugiyama, Fumitaka Hashiya, Junichi Taniguchi, Ganesh N. Pandian, Mengting Ai, Zutao Yu, Kaori Hashiya, Toshikazu Bando, Soumen K. Samanta, Lyle Isaacs, and Shuji Ikeda
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Bridged-Ring Compounds ,Molecular Structure ,010405 organic chemistry ,Epigenetic modifier ,Chemistry ,Metals and Alloys ,Imidazoles ,Locus (genetics) ,General Chemistry ,DNA ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Cell biology ,Epigenesis, Genetic ,chemistry.chemical_compound ,Materials Chemistry ,Ceramics and Composites ,Transcription factor ,Transcription Factors - Abstract
We developed an epigenetically active, cooperative DNA binding transcription factor platform assisted by cucurbit[7]uril (CB7) host–guest modules. This new type of molecule termed ePIP–HoGu not only mimics the operation of transcription factors as a pair but also recruits the epigenetic modifier to a particular DNA locus.
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- 2020
23. Polidocanol Sclerotherapy Combined with Transarterial Embolization Using n-Butyl Cyanoacrylate for Extracranial Arteriovenous Malformations
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Toyohiro Ota, Makiyo Hagihara, Yuichiro Izumi, Takahiro Yamamoto, Nozomu Matsunaga, Tsuneo Ishiguchi, Akira Kitagawa, Shuji Ikeda, and Mayako Yamaji
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,medicine.medical_treatment ,Polidocanol ,Polyethylene Glycols ,030218 nuclear medicine & medical imaging ,law.invention ,Arteriovenous Malformations ,Young Adult ,Embolization ,03 medical and health sciences ,0302 clinical medicine ,law ,Sclerotherapy ,Transarterial embolization ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Clinical Investigation ,Ethanolamine Oleate ,Child ,Aged ,Retrospective Studies ,medicine.diagnostic_test ,business.industry ,Sclerosing Solutions ,Angiography ,Enbucrilate ,Middle Aged ,Embolization, Therapeutic ,NBCA ,Surgery ,Treatment Outcome ,Cyanoacrylate ,Child, Preschool ,030220 oncology & carcinogenesis ,Female ,Radiology ,Cardiology and Cardiovascular Medicine ,business ,medicine.drug - Abstract
Purpose To assess the safety and effectiveness of polidocanol sclerotherapy combined with transarterial embolization using a liquid adhesive agent (n-butyl cyanoacrylate, NBCA) for treatment of extracranial arteriovenous malformations (AVMs). Materials and Methods Twenty-three patients with symptomatic AVMs in the head and neck (6), upper (7) and lower extremity (10) with a mean age of 42 years (range 4–74) treated with polidocanol sclerotherapy were retrospectively assessed. AVMs were classified according to the angiographic morphology of the nidus. There were 2 type I, 6 type II, 6 type IIIa and 9 type IIIb. Arterial embolization using NBCA was performed to reduce arterial flow before sclerotherapy. Polidocanol mixed with contrast material or carbon dioxide was delivered by percutaneous direct puncture. Results Treatment was successfully performed in all patients. In the mean follow-up period of 38 months, symptoms resolved or improved in 20/23 patients (87.0%). AVMs were devascularized 100% in 2 patients, 76–99% in 13, 50–75% in 7 and
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- 2018
24. Nano-Structure-Controlled Very Low Resistivity Cu Wires Formed by High Purity and Optimized Additives
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Shuji Ikeda, Jin Onuki, Takatoshi Nagano, Takashi Inami, Yasushi Sasajima, and Kunihiro Tamahashi
- Subjects
Materials science ,Annealing (metallurgy) ,020209 energy ,High purity electrolyte ,optimized additives ,02 engineering and technology ,Electrolyte ,Conductivity ,Field simulation ,Grain size ,nano-structure controlled Cu wire ,Electronic, Optical and Magnetic Materials ,low resistivity ,Electrical resistivity and conductivity ,Nano ,0202 electrical engineering, electronic engineering, information engineering ,Grain boundary ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,Electrical and Electronic Engineering ,Composite material ,lcsh:TK1-9971 ,Biotechnology - Abstract
Resistivity increase in nano-level Cu wires is becoming a critical issue for high speed ULSIs. We have established a new manufacturing process utilizing very high purity 9N electrolyte and optimized additives to control nano-structures of Cu wires, and we realized Cu wires for practical use with 50% lower resistivity than those made with the conventional process. Using STEM analyses and phase field simulation, we also ascertained the reason for getting the very low resistivity Cu wires.
- Published
- 2018
25. Renal dysfunction after abdominal or thoracic endovascular aortic aneurysm repair: incidence and risk factors
- Author
-
Akira Kitagawa, Tsuneo Ishiguchi, Kojiro Suzuki, Shuji Ikeda, Hiroyuki Ishibashi, Toyohiro Ota, Makiyo Hagihara, and Yuichiro Izumi
- Subjects
Male ,medicine.medical_specialty ,medicine.medical_treatment ,Contrast Media ,Renal function ,Aorta, Thoracic ,030204 cardiovascular system & hematology ,urologic and male genital diseases ,030218 nuclear medicine & medical imaging ,Nephropathy ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,medicine.artery ,Occlusion ,medicine ,Humans ,Thoracic aorta ,Radiology, Nuclear Medicine and imaging ,Aorta, Abdominal ,Aged ,Retrospective Studies ,Aortic Aneurysm, Thoracic ,Dose-Response Relationship, Drug ,business.industry ,Incidence ,Incidence (epidemiology) ,Endovascular Procedures ,Age Factors ,Retrospective cohort study ,medicine.disease ,Surgery ,Causality ,Radiographic Image Enhancement ,Radiation therapy ,Treatment Outcome ,Cardiology ,Female ,Kidney Diseases ,Hemodialysis ,Tomography, X-Ray Computed ,business ,Aortic Aneurysm, Abdominal - Abstract
To determine the incidence and risk factors of renal dysfunction after abdominal endovascular aortic repair (EVAR) and thoracic endovascular aortic repair (TEVAR). The study consisted of 227 patients treated with EVAR and 90 with TEVAR for aortic aneurysms. Parameters, including patients’ background factors, preoperative renal function, contrast dose and aortic wall irregularity on CT images were assessed in relation to postoperative renal dysfunction. Deterioration of renal function was observed in 33 of 218 patients (15.1%) after EVAR and in 7 of 79 (8.9%) patients after TEVAR. Hemodialysis was required in one patient after EVAR. In EVAR, renal dysfunction correlated with age (p = 0.034) and occlusion of accessory renal artery (p = 0.0001). In TEVAR, renal dysfunction correlated with age (p = 0.021), contrast dose (p = 0.042) and irregularity of the descending aortic wall (p = 0.023). In a multiple regression analysis, postoperative renal dysfunction was correlated with occlusion of accessory renal artery (p = 0.0003) after EVAR, and age (p = 0.02), contrast dose (p = 0.026) and irregularity of the descending aortic wall (p = 0.042) after TEVAR. Occlusion of accessory renal artery in EVAR, and age, contrast dose and irregularity of the descending aortic wall in TEVAR were considered to be predictors of postoperative renal dysfunction.
- Published
- 2017
26. Intravascular Treatment for Arteriovenous Malformations in Extremities
- Author
-
Takahiro Yamamoto, Toyohiro Ohta, Akiko Narita, Tsuneo Ishiguchi, Makiyo Hagihara, Yuichiro Izumi, Shuji Ikeda, and Akira Kitagawa
- Subjects
03 medical and health sciences ,0302 clinical medicine ,business.industry ,Medicine ,business ,030218 nuclear medicine & medical imaging - Published
- 2017
27. Nanochannel-Confined TAMRA-Polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations
- Author
-
Kyubong Jo, Hiroshi Sugiyama, Yeng-Long Chen, Rakwoo Chang, Yongkyun Kim, Shuji Ikeda, Jungyul Park, Seonghyun Lee, Yelin Lee, Cong Wang, and Gun Young Jung
- Subjects
Persistence length ,nanochannel ,Polymers and Plastics ,Chemistry ,Intercalation (chemistry) ,persistence length ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Polypyrrole ,01 natural sciences ,Article ,0104 chemical sciences ,lcsh:QD241-441 ,chemistry.chemical_compound ,lcsh:Organic chemistry ,Ionic strength ,DNA stretching length ,Helix ,Biophysics ,Molecule ,Polymer physics ,0210 nano-technology ,DNA - Abstract
Large DNA molecules have been utilized as a model system to investigate polymer physics. However, DNA visualization via intercalating dyes has generated equivocal results due to dye-induced structural deformation, particularly unwanted unwinding of the double helix. Thus, the contour length increases and the persistence length changes so unpredictably that there has been a controversy. In this paper, we used TAMRA-polypyrrole to stain single DNA molecules. Since this staining did not change the contour length of B-form DNA, we utilized TAMRA-polypyrrole stained DNA as a tool to measure the persistence length by changing the ionic strength. Then, we investigated DNA stretching in nanochannels by varying the ionic strength from 0.06 mM to 47 mM to evaluate several polymer physics theories proposed by Odijk, de Gennes and recent papers to deal with these regimes.
- Published
- 2018
28. Distribution of scatter radiation by C-arm cone-beam computed tomography in angiographic suite: measurement of doses and effectiveness of protection devices.
- Author
-
Mayako Yamaji, Tsuneo Ishiguchi, Shuji Koyama, Shuji Ikeda, Akira Kitagawa, Makiyo Hagihara, Yuji Itoh, Masaru Nakamura, Toyohiro Ota, and Kojiro Suzuki
- Subjects
CONE beam computed tomography ,RADIATION protection ,THERAPEUTIC embolization ,DIGITAL subtraction angiography ,RADIATION dosimetry - Abstract
Distribution of radiation by C-arm cone-beam computed tomography (CBCT) in the angiographic suite and effectiveness of protection devices were assessed. CBCT image of a human phantom was obtained by a rotation of 220 degrees during 8 seconds of exposure. One hundred and twelve dosimeters were placed at different positions around the beam entry site, and color maps of dose distributions were drawn for horizontal and vertical planes. The measurements showed the highest radiation dose over 600 μGy by a single CBCT image acquisition at a distance of 60 cm from the beam entry site and a height of 90 cm from the floor. The color maps demonstrated the dose distribution to be more intense at the bilateral directions of the phantom. With the use of a ceiling-mounted transparent lead-acryl screen and a table-suspended lead curtain, the doses were reduced by 45--92 % at a direction of 210 degrees and a distance of 120 cm. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
29. Nano-structure-controlled very low resistivity Cu wires formed by high purity electrolyte and optimized additives
- Author
-
Takashi Inami, Kunihiro Tamahashi, Shuji Ikeda, Jin Onuki, Yasushi Sasajima, and Takatoshi Nagano
- Subjects
010302 applied physics ,Materials science ,Manufacturing process ,Metallurgy ,02 engineering and technology ,Electrolyte ,Conductivity ,021001 nanoscience & nanotechnology ,01 natural sciences ,Grain size ,Electrical resistivity and conductivity ,0103 physical sciences ,Nano ,Grain boundary ,0210 nano-technology - Abstract
Resistivity increase in nano-level Cu wires is becoming a critical issue for high speed ULSIs. We have established the new manufacturing process utilizing very high-purity 9N electrolyte and optimized additives to control nano-structures of Cu wires, and we realized Cu wires with resistivity 50% lower than that of wires made by a conventional process. We also have ascertained the reason for getting very low resistivity Cu wires by STEM analyses and first-principle simulation.
- Published
- 2017
30. Ethanolamine oleate sclerotherapy combined with transarterial embolization using n-butyl cyanoacrylate for extracranial arteriovenous malformations
- Author
-
Akira, Kitagawa, Yuichiro, Izumi, Makiyo, Hagihara, Seiji, Kamei, Shuji, Ikeda, Eisuke, Katsuda, Junko, Kimura, Toyohiro, Ota, and Tsuneo, Ishiguchi
- Subjects
Adult ,Male ,Adolescent ,Angioplasty ,Angiography ,Oleic Acids ,Enbucrilate ,Middle Aged ,Combined Modality Therapy ,Embolization, Therapeutic ,Sclerosing Solutions ,Arteriovenous Malformations ,Cohort Studies ,Young Adult ,Treatment Outcome ,Sclerotherapy ,Humans ,Female ,Radiology, Nuclear Medicine and imaging ,Tomography, X-Ray Computed ,Cardiology and Cardiovascular Medicine ,Aged ,Follow-Up Studies ,Retrospective Studies - Abstract
This study was designed to assess the safety and effectiveness of ethanolamine oleate (EO) sclerotherapy combined with transarterial embolization using a liquid adhesive agent (n-butyl cyanoacrylate, NBCA) for treatment of extracranial arteriovenous malformations (AVMs).Twenty-four patients with symptomatic AVMs in the head and neck (n = 15), extremity (n = 5), and trunk (n = 4) with a mean age of 44 years (range, 18-78) treated with EO sclerotherapy were retrospectively assessed. AVMs were classified according to the angiographic morphology of the nidus. There were 7 type II (arteriolovenous fistulae), 6 type IIIa (arteriolovenulous fistulae with nondilated fistula), and 11 type IIIb (arteriolovenulous fistulae with dilated fistula). Transarterial embolization using NBCA was performed to reduce arterial flow before sclerotherapy. EO mixed with contrast material was delivered by percutaneous direct puncture or by catheterization into the draining vein under balloon occlusion.Three (13%) of 24 patients were cured, 17 (71%) had partial remission, and 4 (16%) no remission. Treatment was considered effective (cure and partial remission) in 20 patients (83%). Four patients (16%) experienced transient minor complications, including self-healing skin ulcer (n = 3) and localized deep venous thrombosis (n = 1). There were no major complications.EO sclerotherapy combined with transarterial embolization using NBCA is safe and effective for treating extracranial AVMs with an acceptable risk of minor complications.
- Published
- 2013
31. A quick and simple FISH protocol with hybridization-sensitive fluorescent linear oligodeoxynucleotide probes
- Author
-
Shuji Ikeda, Akiko Nakamura, Hiroyuki Yanagisawa, Dan Ohtan Wang, Yasunori Hayashi, Hitomi Matsuno, and Akimitsu Okamoto
- Subjects
Method ,In situ hybridization ,DNA, Satellite ,Biology ,Hippocampus ,Mice ,chemistry.chemical_compound ,medicine ,Animals ,Humans ,RNA, Messenger ,Molecular Biology ,Metaphase ,Cells, Cultured ,Embryonic Stem Cells ,In Situ Hybridization, Fluorescence ,Fluorescent Dyes ,medicine.diagnostic_test ,Gene Expression Profiling ,RNA ,Telomere ,Fluorescence ,Molecular biology ,Cell biology ,Gene expression profiling ,Oligodeoxyribonucleotides ,chemistry ,DNA ,HeLa Cells ,Fluorescence in situ hybridization - Abstract
Fluorescence in situ hybridization (FISH) is a powerful tool used in karyotyping, cytogenotyping, cancer diagnosis, species specification, and gene-expression analysis. Although widely used, conventional FISH protocols are cumbersome and time consuming. We have now developed a FISH method using exciton-controlled hybridization-sensitive fluorescent oligodeoxynucleotide (ECHO) probes. ECHO–FISH uses a 25-min protocol from fixation to mounting that includes no stringency washing steps. We use ECHO–FISH to detect both specific DNA and RNA sequences with multicolor probes. ECHO–FISH is highly reproducible, stringent, and compatible with other fluorescent cellular labeling techniques. The resolution allows detection of intranuclear speckles of poly(A) RNA in HeLa cells and dissociated hippocampal primary cultures, and mRNAs in the distal dendrites of hippocampal neurons. We also demonstrate detection of telomeric and centromeric DNA on metaphase mouse chromosomes. The simplicity of the ECHO–FISH method will likely accelerate cytogenetic and gene-expression analysis with high resolution.
- Published
- 2011
32. Cy5-Conjugated Hybridization-Sensitive Fluorescent Oligonucleotides for Ratiometric Analysis of Nuclear Poly(A)+ RNA
- Author
-
Hiroyuki Yanagisawa, Shuji Ikeda, Takashi Kubota, Akimitsu Okamoto, and Mizue Yuki
- Subjects
Pharmacology ,chemistry.chemical_classification ,RNA localization ,Oligonucleotide ,Organic Chemistry ,Biomedical Engineering ,Nucleic Acid Hybridization ,Pharmaceutical Science ,RNA ,Bioengineering ,Carbocyanines ,Conjugated system ,Fluorescence ,Nucleic acid thermodynamics ,Biochemistry ,chemistry ,Quinolines ,Poly-A RNA ,Nucleotide ,Benzothiazoles ,Oligonucleotide Probes ,Poly A ,Fluorescent Dyes ,Biotechnology - Abstract
Subnuclear poly(A)(+) RNA localization in living mammalian cells was visualized by ratiometric analysis using hybridization-sensitive fluorescent oligonucleotide probes. Probes were oligonucleotides, which contained a Cy5 fluorescent dye at the strand end and a thiazole orange double-labeled nucleotide inside strand. A ratiometric analysis using poly(A)-targeting probes revealed a distribution of the probe itself as red fluorescence and localization of the target RNA sequence in cell nuclei as green fluorescence. The fluorescence of the subnuclear poly(A)(+) RNA hybridized with the poly(A)-targeting probes was observed as puncta in interchromatin areas.
- Published
- 2011
33. Hybridization-sensitive fluorescent DNAprobe with self-avoidance ability
- Author
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Akimitsu Okamoto, Takashi Kubota, Shuji Ikeda, Hiroyuki Yanagisawa, Shizuho Tsuruma, and Mizue Yuki
- Subjects
Cell Survival ,Guanine ,Base pair ,Analytical chemistry ,Biochemistry ,Absorption ,Cytosine ,chemistry.chemical_compound ,Nucleic acid thermodynamics ,Animals ,Humans ,Nucleotide ,RNA, Messenger ,Physical and Theoretical Chemistry ,Thiazole ,Fluorescent Dyes ,chemistry.chemical_classification ,Base Sequence ,Hybridization probe ,Organic Chemistry ,Temperature ,Nucleic Acid Hybridization ,Fluorescence ,Molecular Imaging ,Spectrometry, Fluorescence ,chemistry ,Biophysics ,DNA Probes ,Dimerization ,HeLa Cells - Abstract
Hybridization-sensitive fluorescent probes have an inherent disadvantage: self-dimerization of the probe prevents the fluorescence quenching prior to hybridization with the target, resulting in a high background signal. To avoid self-dimerization of probes, we focused on a base pair formed by 2'-deoxyinosine (I) and N(4)-ethyl-2'-deoxycytidine (E). I and E bases form more stable base pairs with cytosine and guanine, respectively, compared with an I/E base pair. New hybridization-sensitive fluorescent probes, IE probes, were prepared containing three unnatural nucleotides, I, E and D(514) as a doubly thiazole orange-labeled nucleotide. The IE probes had low thermostability, sufficient to avoid self-dimerization. Absorption spectra of the IE probes exhibited a hybridization-dependent shift of the absorption maximum, suggesting that excitonic interaction was working between the thiazole orange dyes in the probe. Interdye excitonic interaction of IE probes was very effective; thus, replacement of guanine and cytosine with I and E improved the ratio of fluorescence intensities after and before hybridization (I(hybrid)/I(nonhybrid)). Although a significant weakness in fluorescence intensity was observed for several IE probes after hybridization with the target sequence when both or either of the bases adjacent to D(514) is E, a dramatic recovery of the fluorescence intensity of hybrids was observed when any E adjacent to D(514) was replaced with cytosine. Improvement of the I(hybrid)/I(nonhybrid) value by incorporation of I and E helped the design of a long probe sequence for mRNA imaging.
- Published
- 2010
34. Doubly thiazole orange-labeled cytidine for functional expansion of a hybridization-sensitive probe
- Author
-
Akimitsu Okamoto, Hiroyuki Yanagisawa, Mizue Yuki, and Shuji Ikeda
- Subjects
chemistry.chemical_classification ,Quenching (fluorescence) ,Organic Chemistry ,Cytidine ,Biochemistry ,Combinatorial chemistry ,Fluorescence ,chemistry.chemical_compound ,chemistry ,Drug Discovery ,Nucleic acid ,Nucleotide ,DNA ,Cytosine ,Derivative (chemistry) - Abstract
A 2′-deoxycytidine derivative modified by two thiazole orange dyes has been designed for functional expansion of hybridization-sensitive fluorescence probes. This nucleotide was synthesized by a procedure that included protection of the cytosine amino group by di( n -butyl)formamidine formation, followed by incorporation into DNA. The fluorescence of the synthesized DNA was controlled by excitonic interaction, showing strong fluorescence upon hybridization with the target nucleic acid and effective quenching in a single-stranded state of the probe.
- Published
- 2009
35. Exciton-Controlled Hybridization-Sensitive Fluorescent Probes: Multicolor Detection of Nucleic Acids
- Author
-
Shuji Ikeda, Takashi Kubota, Akimitsu Okamoto, and Mizue Yuki
- Subjects
Molecular Structure ,Chemistry ,Nucleic acid methods ,Nucleic Acid Hybridization ,RNA ,General Chemistry ,General Medicine ,Fluorescence ,Catalysis ,Nucleic acid thermodynamics ,Biochemistry ,Molecular beacon ,Nucleic Acids ,Nucleic acid ,Humans ,Bioorganic chemistry ,Molecule ,Fluorescent Dyes ,HeLa Cells - Published
- 2009
36. Doubly Thiazole Orange-Labeled DNA for Live Cell RNA Imaging
- Author
-
Shuji Ikeda, Takashi Kubota, and Akimitsu Okamoto
- Subjects
Cell ,RNA ,General Chemistry ,Thiazole orange ,Fluorescence ,chemistry.chemical_compound ,medicine.anatomical_structure ,Biochemistry ,chemistry ,Intramolecular force ,cardiovascular system ,Biophysics ,medicine ,DNA - Abstract
A hybridization-sensitive, quencher-free fluorescent probe for RNA detection has been designed using the concept of fluorescence quenching caused by the intramolecular excitonic interaction of fluo...
- Published
- 2009
37. DNA / RNA Imaging with a Photo-Chemically Designed Fluorescent Nucleotide
- Author
-
Shuji Ikeda, Takashi Kubota, and Akimitsu Okamoto
- Subjects
chemistry.chemical_classification ,chemistry ,Base pair ,Nucleic acid ,Directionality ,Nuclease protection assay ,Nucleotide ,Primase ,Molecular biology ,Fluorescence - Published
- 2009
38. Sequence Dependence of Fluorescence Emission and Quenching of Doubly Thiazole Orange Labeled DNA: Effective Design of a Hybridization-Sensitive Probe
- Author
-
Akimitsu Okamoto, Shuji Ikeda, Takeshi Kubota, and Katsuhito Kino
- Subjects
Base Pair Mismatch ,Base pair ,Biomedical Engineering ,DNA, Single-Stranded ,Pharmaceutical Science ,Bioengineering ,Sequence (biology) ,Photochemistry ,Sensitivity and Specificity ,Fluorescence ,chemistry.chemical_compound ,Nucleotide ,Benzothiazoles ,Binding site ,Pharmacology ,chemistry.chemical_classification ,Quenching (fluorescence) ,Base Sequence ,Staining and Labeling ,Organic Chemistry ,DNA ,chemistry ,Drug Design ,Quinolines ,DNA Probes ,Dimerization ,Nucleoside ,Biotechnology - Abstract
We have designed a doubly thiazole orange labeled nucleoside showing high fluorescence intensity for a hybrid with the target DNA and effective quenching for a single-stranded state. Knowing how much the fluorescence emission and quenching of this probe depend on the probe sequence and why there is such a sequence dependence is important for effective probe design, we synthesized more than 30 probe sequences and measured their fluorescence intensities. When the probe hybridized with the target DNA strands, there was strong emission, whereas the emission intensity was much weaker before hybridization; however, self-dimerization of probes suppressed fluorescence quenching. In particular, the G/C base pairs neighboring the labeled nucleotide in a self-dimeric structure resulted in a low quenching ability for the probe before hybridization. On the other hand, mismatched base pair formation around the labeled site decreased the fluorescence intensity because the neighboring sequence is the binding site of the tethered thiazole orange dyes. The hybridization enhanced the fluorescence of the probe even when the labeled nucleotide was located at the end of the probe strand; however, the partial lack of duplex structure resulted in a decrease in the fluorescence intensity of the hybrid.
- Published
- 2008
39. Uterine artery embolization by use of porous gelatin particles for symptomatic uterine leiomyomas: comparison with hand-cut gelatin sponge particles
- Author
-
Yuichiro Izumi, Shuji Ikeda, Eisuke Katsuda, Tsuneo Ishiguchi, Makiyo Hagihara, Toyohiro Ota, Seiji Kamei, and Akira Kitagawa
- Subjects
Adult ,medicine.medical_specialty ,food.ingredient ,Uterine fibroids ,medicine.medical_treatment ,Infarction ,Gelatin ,Hemostatics ,food ,Uterine artery embolization ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Retrospective Studies ,Uterine leiomyoma ,medicine.diagnostic_test ,Leiomyoma ,business.industry ,Arterial Embolization ,Magnetic resonance imaging ,Middle Aged ,Uterine Artery Embolization ,medicine.disease ,Gelatin Sponge, Absorbable ,Magnetic Resonance Imaging ,female genital diseases and pregnancy complications ,Surgery ,Treatment Outcome ,Uterine Neoplasms ,Female ,business ,Follow-Up Studies - Abstract
To evaluate the results of uterine artery embolization (UAE) for symptomatic uterine leiomyoma by use of porous gelatin particles (PGP) in comparison with conventional hand-cut gelatin sponge particles. One hundred and fifteen consecutive patients who had undergone UAE were retrospectively assessed. The first 64 patients were treated with hand-cut gelatin sponge and the last 51 with PGP. Extent of infarction, volume reduction of the dominant leiomyoma on magnetic resonance (MR) imaging, and change in symptoms were assessed. UAE was successfully performed for all patients. No major complications were observed. MR images one month after UAE showed that the mean extent of infarction of the dominant leiomyoma was 97 % for patients treated with PGP and 96 % for those treated with hand-cut gelatin sponge. Volume reductions of the dominant leiomyoma after 3, 6, 12, and 24 months were, respectively, 45, 56, 62, and 66 % for use of PGP and 45, 57, 63, and 68 % for use of hand-cut gelatin sponge. Symptoms including heavy menstrual bleeding, heavy menstrual pain, and abdominal heaviness had improved by 95–100 % at 12 months. There was no difference between the two groups. UAE with PGP is safe, and as effective as conventional gelatin sponge particles.
- Published
- 2015
40. Metal Injection Molding of Alloy 718 for Aerospace Applications
- Author
-
Hiroki Yoshizawa, Takashi Yoshinouchi, Nobuyasu Tsuno, and Shuji Ikeda
- Subjects
Materials science ,Metal injection molding ,business.industry ,Metallurgy ,Alloy ,engineering ,engineering.material ,Composite material ,Aerospace ,business - Published
- 2014
41. Threshold voltage-related soft error degradation in a TFT SRAM cell
- Author
-
K. Imato, K. Ishibashi, S. Kamohara, Shuji Ikeda, K. Takahashi, and Y. Yoshida
- Subjects
Materials science ,business.industry ,Spice ,Transistor ,Electronic, Optical and Magnetic Materials ,Threshold voltage ,law.invention ,PMOS logic ,Soft error ,law ,Thin-film transistor ,Electronic engineering ,Optoelectronics ,Static random-access memory ,Electrical and Electronic Engineering ,business ,Voltage - Abstract
This is the first report of abnormal behavior in the soft error rate (SER) dependence on supply voltage (Vcc) for a bottom-gated polysilicon PMOS thin-film transistor (TFT) static random access memory (SRAM). We found that the TFT SER does not continuously improve (as is expected and desirable) with increasing Vcc when Vcc exceeds -Vth (threshold voltage) of the TFT within a range of about 0-2 V. This was confirmed with samples of TFT with Vth intentionally varied from 0 to -5 V (by adjusting channel doping). A possible explanation of this Vcc independence is proposed in the form of a SPICE simulation with as little as a 0.1-V TFT transient Vth shift due to the TFT's floating body. The accelerated SER was measured by using an Americium alpha particle source.
- Published
- 2003
42. The Effect of Carbon Content on High Cycle Fatigue Behavior of Metal Injection Molded 718 Superalloys
- Author
-
Shuji Ikeda, Hiroki Yoshizawa, Takashi Yoshinouchi, and Nobuyasu Tsuno
- Subjects
Metal ,Superalloy ,Materials science ,chemistry ,Metal injection molding ,visual_art ,Metallurgy ,visual_art.visual_art_medium ,Fatigue testing ,chemistry.chemical_element ,Composite material ,Carbon - Published
- 2014
43. Fabrication Process Design of Dislocation-Free Semiconductor Devices by Using Stress Singularity Parameters
- Author
-
Chiemi Hashimoto, Hideo Miura, Shuji Ikeda, Hiroyuki Ohta, Y. Tamaki, and Takahide Ikeda
- Subjects
Fabrication ,Materials science ,Mechanical Engineering ,Transistor ,Bipolar junction transistor ,Mechanical engineering ,Process design ,Semiconductor device ,Condensed Matter Physics ,Finite element method ,law.invention ,Reliability (semiconductor) ,Mechanics of Materials ,law ,Hardware_INTEGRATEDCIRCUITS ,Electronic engineering ,General Materials Science ,Dislocation - Abstract
During fabrication of semiconductor devices, the stresses on a silicon substrate sometimes cause dislocations and worsen the electric characteristics of the device. Therefore, a dislocation-free fabrication process needs to be developed to improve reliability. In this paper, a process design method using stress singularity parameters (K and λ) is proposed. In order to prevent the dislocation generation, the process parameters, such as the device structure, materials and process temperatures, are set to keep the stress singularity parameters (K and λ) under the critical values of dislocation generation Kdc. These parameters are predicted using FEM method considering the internal stress of thin films. The process design was applied to a bipolar transistor and a MOS transistor and the experimental results agreed very well with the prediction. It was confirmed that this new process design method is effective in improving device reliabirity.
- Published
- 2001
44. Metallo-bleomycin cleaves parallel-stranded DNA similarly to B-DNA
- Author
-
Isao Saito, Shuji Ikeda, and Hiroshi Sugiyama
- Subjects
chemistry.chemical_classification ,DNA ligase ,Dna duplex ,DNA clamp ,Organic Chemistry ,Bleomycin ,Biochemistry ,chemistry.chemical_compound ,Product analysis ,DNA degradation ,chemistry ,Drug Discovery ,DNA - Abstract
Bleomycin (BLM)-mediated degradation of parallel-stranded (ps) DNA duplex was investigated by HPLC product analysis of the oxidized DNA fragments. It was revealed that Co– and Fe–BLMs effectively degraded a ps DNA decamer at 5′-GC site in a similar manner to that for antiparallel-stranded (aps) B-form DNA. While the strand orientations of ps and aps duplexes are quite different, metallo-BLMs still bind to ps DNA duplex and cause DNA degradation. These results indicate that metallo-BLMs productively interact with the degradable strand of both ps and aps DNA duplexes.
- Published
- 2000
45. Tri-Gate Bulk MOSFET Design for CMOS Scaling to the End of the Roadmap
- Author
-
Changhwan Shin, Xin Sun, Tiehui Liu, Qiang Lu, G. Gebara, Victor Moroz, Hideki Takeuchi, Shuji Ikeda, and J. T. Wetzel
- Subjects
Engineering ,Fabrication ,business.industry ,Electrical engineering ,Hardware_PERFORMANCEANDRELIABILITY ,Aspect ratio (image) ,Electronic, Optical and Magnetic Materials ,Planar ,CMOS ,Scalability ,MOSFET ,Hardware_INTEGRATEDCIRCUITS ,Electronic engineering ,Field-effect transistor ,Electrical and Electronic Engineering ,business ,Hardware_LOGICDESIGN ,Communication channel - Abstract
A tri-gate bulk MOSFET design utilizing a low-aspect-ratio channel is proposed to provide an evolutionary pathway for CMOS scaling to the end of the roadmap. 3-D device simulations indicate that this design offers the advantages of a multi-gate FET (reduced variability in performance and improved scalability) together with the advantages of a conventional planar MOSFET (low substrate cost and capability for dynamic threshold-voltage control).
- Published
- 2008
46. Foreword Special Issue on Variation Aware Technology and Circuit Co-Design
- Author
-
Huiling Shang, Shuji Ikeda, and Stanley S. C. Song
- Subjects
Engineering ,Process (engineering) ,business.industry ,Scale (chemistry) ,Circuit design ,Electrical engineering ,Variation (game tree) ,Electronic, Optical and Magnetic Materials ,CMOS ,Return on investment ,Hardware_INTEGRATEDCIRCUITS ,Electronic engineering ,Electrical and Electronic Engineering ,Performance improvement ,Metal gate ,business - Abstract
Once considered mature and commodity technology, CMOS Si technology keeps revamping itself as a collection of most innovative technologies known to humanity at this given time. Beyond conventional vanilla scale of SiON/Poly planar bulk Si technology, lab-level experiments constantly become manufacturing reality, such as high- k , metal gate, FDSOI, FinFET, and many exotic patterning technologies. This rapid pace of new technology introduction to CMOS technology, however, requires much more sophisticated optimization of process, device, and circuit design, in order to maximize return on investment. Careful optimization of process technology, device structure, layout, and circuit design in a holistic manner enables significant performance improvement while reducing overall power consumption with the least amount of area penalty.
- Published
- 2015
47. Facile synthesis of puromycin-tethered oligonucleotides at the 3′-end
- Author
-
Shuji Ikeda, Hiroshi Sugiyama, and Isao Saito
- Subjects
carbohydrates (lipids) ,chemistry.chemical_compound ,Biochemistry ,chemistry ,CpG site ,Oligonucleotide ,Puromycin ,Organic Chemistry ,Drug Discovery ,Directionality ,RNA ,DNA - Abstract
A facile method for the synthesis of puromycin-tethered oligonucleotides at the 3′-end is described. The method utilizes a novel CPG support derived from commercially available puromycin. Puromycin-tethered DNA and RNA oligomers were synthesized using a puromycin-tethered CPG support by the usual protocol for automated DNA and RNA synthesis.
- Published
- 1998
48. Fibrillary glomerulonephritis in a patient with familial sensorneural deafness
- Author
-
Hirofumi Makino, Masami Hashimoto, Shuji Ikeda, Kenichi Shikata, Kazue Hironaka, Yoshio Nagake, and Haruo Ichikawa
- Subjects
Pathology ,medicine.medical_specialty ,Proteinuria ,medicine.diagnostic_test ,business.industry ,Fibrillary Glomerulonephritis ,Bilateral sensorineural deafness ,General Medicine ,Sensorineural deafness ,Amyloid fibril ,Serology ,Nephrology ,Medicine ,Renal biopsy ,medicine.symptom ,Family history ,business - Abstract
Summary: A 47-year-old woman was admitted to the hospital for evaluation of proteinuria. Bilateral sensorineural deafness had been diagnosed previously at age 35. She had a positive family history of deafness going back three generations. A renal biopsy showed the presence of highly organized fibrillary deposits in the subendothelial mesangial areas. the microfibrils had a diameter of 11-16 nm, larger than the diameter of amyloid fibrils, and did not have a microtubular appearance. the renal specimen was negative for Congored staining. There was no clinical or serologic evidence of paraproteinaemia, cryoglobulinaemia, light-chain disease, or systemic lupus erythematosus. the diagnosis was fibrillary glomerulonephritis. This is the first known case of fibrillary glomerulonephritis in a patient with familial sensorineural deafness.
- Published
- 1997
49. Fluorescent triplex-forming DNA oligonucleotides labeled with a thiazole orange dimer unit
- Author
-
Hiroyuki Yanagisawa, Mizue Yuki, Shuji Ikeda, and Akimitsu Okamoto
- Subjects
Oligonucleotide ,Dimer ,Organic Chemistry ,Kinetics ,Oligonucleotides ,DNA ,Photochemistry ,Biochemistry ,Fluorescence ,Combinatorial chemistry ,chemistry.chemical_compound ,chemistry ,Duplex (building) ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Quinolines ,Molecule ,Thermodynamics ,Thermal stability ,Benzothiazoles ,Fluorescent Dyes ,Research Paper - Abstract
Fluorescent probes for the detection of a double-stranded DNA were prepared by labeling a triplex-forming DNA oligonucleotide with a thiazole orange (TO) dimer unit. They belong to ECHO (exciton-controlled hybridization-sensitive fluorescent oligonucleotide) probes which we have previously reported. The excitonic interaction between the two TO molecules was expected to effectively suppress the background fluorescence of the probes. The applicability of the ECHO probes for the detection of double-stranded DNA was confirmed by examining the thermal stability and photophysical and kinetic properties of the DNA triplexes formed by the ECHO probes.
- Published
- 2013
50. VLSI Technology and Circuits
- Author
-
Kaustav Banerjee and Shuji Ikeda
- Subjects
Very-large-scale integration ,Power management ,Interconnection ,business.industry ,Computer science ,Low-k dielectric ,Integrated circuit ,law.invention ,law ,Electronic engineering ,System integration ,System on a chip ,business ,Electronic circuit - Published
- 2013
Catalog
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