252 results on '"Shortt C"'
Search Results
2. Perioperative heart-type fatty acid binding protein is associated with acute kidney injury after cardiac surgery
- Author
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Shlipak, Michael, Schaub, JA, Garg, AX, Coca, SG, Testani, JM, Shlipak, MG, Eikelboom, J, Kavsak, P, McArthur, E, Shortt, C, and Whitlock, R
- Abstract
© 2015 International Society of Nephrology Acute kidney injury (AKI) is a common complication after cardiac surgery and is associated with worse outcomes. Since heart fatty acid binding protein (H-FABP) is a myocardial protein that detects cardiac injury,
- Published
- 2015
3. 41 Prevalence of delirium among older patients attending a Frailty service in an Emergency Department
- Author
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Sheil, O, primary, Okon, M, additional, Roche, E, additional, Duffy, P, additional, Small, C, additional, and Shortt, C, additional
- Published
- 2023
- Full Text
- View/download PDF
4. 42 Resolution of delirium upon discharge & mortality rates among frail older persons attending an Emergency Department frailty service
- Author
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Okon, M, primary, Sheil, O, additional, Roche, E, additional, Patricia, D, additional, Shortt, C, additional, and Small, C, additional
- Published
- 2023
- Full Text
- View/download PDF
5. Clostridium difficile carriage in adult cystic fibrosis (CF); implications for patients with CF and the potential for transmission of nosocomial infection
- Author
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Burke, D.G., Harrison, M.J., Fleming, C., McCarthy, M., Shortt, C., Sulaiman, I., Murphy, D.M., Eustace, J.A., Shanahan, F., Hill, C., Stanton, C., Rea, M.C., Ross, R.P., and Plant, B.J.
- Published
- 2017
- Full Text
- View/download PDF
6. Combining presentation high-sensitivity cardiac troponin I and glucose measurements to rule-out an acute myocardial infarction in patients presenting to emergency department with chest pain
- Author
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Greenslade, J.H., Kavsak, P., Parsonage, W., Shortt, C., Than, M., Pickering, J.W., Aldous, S., and Cullen, L.
- Published
- 2015
- Full Text
- View/download PDF
7. Inhaled versus nebulised tobramycin: A real world comparison in adult cystic fibrosis (CF)
- Author
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Harrison, M.J., McCarthy, M., Fleming, C., Hickey, C., Shortt, C., Eustace, J.A., Murphy, D.M., and Plant, B.J.
- Published
- 2014
- Full Text
- View/download PDF
8. Authorised EU health claims for phytosterols
- Author
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Shortt, C., primary
- Published
- 2015
- Full Text
- View/download PDF
9. List of contributors
- Author
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Arens, U., primary, Bourges, C., additional, Conrad, M., additional, Goux, A., additional, Harland, J., additional, Heys, S.D., additional, Kuczora, S., additional, Le Bloc’h, J., additional, Li, K., additional, Livingstone, K.M., additional, Meynier, A., additional, Paulionis, L., additional, Pauquai, T., additional, Rotondo, D., additional, Ruffell, M.J., additional, Sadler, M., additional, Shortt, C., additional, Tallon, M.J., additional, Vas Dias, F.W., additional, Vinoy, S., additional, Wahle, K.W.J., additional, Walters, B., additional, and Ziesenitz, S.C., additional
- Published
- 2015
- Full Text
- View/download PDF
10. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
- Author
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Brown, P, Zhou, Y, Tan, A, El-Esawi, M, Liehr, T, Blanck, O, Gladue, D, Almeida, G, Cernava, T, Sorzano, C, Yeung, A, Engel, M, Chandrasekaran, A, Muth, T, Staege, M, Daulatabad, S, Widera, D, Zhang, J, Meule, A, Honjo, K, Pourret, O, Yin, C, Zhang, Z, Cascella, M, Flegel, W, Goodyear, C, van Raaij, M, Bukowy-Bieryllo, Z, Campana, L, Kurniawan, N, Lalaouna, D, Huttner, F, Ammerman, B, Ehret, F, Cobine, P, Tan, E, Han, H, Xia, W, Mccrum, C, Dings, R, Marinello, F, Nilsson, H, Nixon, B, Voskarides, K, Yang, L, Costa, V, Bengtsson-Palme, J, Bradshaw, W, Grimm, D, Kumar, N, Martis, E, Prieto, D, Sabnis, S, Amer, S, Liew, A, Perco, P, Rahimi, F, Riva, G, Zhang, C, Devkota, H, Ogami, K, Basharat, Z, Fierz, W, Siebers, R, Tan, K, Boehme, K, Brenneisen, P, Brown, J, Dalrymple, B, Harvey, D, Ng, G, Werten, S, Bleackley, M, Dai, Z, Dhariwal, R, Gelfer, Y, Hartmann, M, Miotla, P, Tamaian, R, Govender, P, Gurney-Champion, O, Kauppila, J, Zhang, X, Echeverria, N, Subhash, S, Sallmon, H, Tofani, M, Bae, T, Bosch, O, Cuiv, P, Danchin, A, Diouf, B, Eerola, T, Evangelou, E, Filipp, F, Klump, H, Kurgan, L, Smith, S, Terrier, O, Tuttle, N, Ascher, D, Janga, S, Schulte, L, Becker, D, Browngardt, C, Bush, S, Gaullier, G, Ide, K, Meseko, C, Werner, G, Zaucha, J, Al-Farha, A, Greenwald, N, Popoola, S, Rahman, S, Xu, J, Yang, S, Hiroi, N, Alper, O, Baker, C, Bitzer, M, Chacko, G, Debrabant, B, Dixon, R, Forano, E, Gilliham, M, Kelly, S, Klempnauer, K, Lidbury, B, Lin, M, Lynch, I, Ma, W, Maibach, E, Mather, D, Nandakumar, K, Ohgami, R, Parchi, P, Tressoldi, P, Xue, Y, Armitage, C, Barraud, P, Chatzitheochari, S, Coelho, L, Diao, J, Doxey, A, Gobet, A, Hu, P, Kaiser, S, Mitchell, K, Salama, M, Shabalin, I, Song, H, Stevanovic, D, Yadollahpour, A, Zeng, E, Zinke, K, Alimba, C, Beyene, T, Cao, Z, Chan, S, Gatchell, M, Kleppe, A, Piotrowski, M, Torga, G, Woldesemayat, A, Cosacak, M, Haston, S, Ross, S, Williams, R, Wong, A, Abramowitz, M, Effiong, A, Lee, S, Abid, M, Agarabi, C, Alaux, C, Albrecht, D, Atkins, G, Beck, C, Bonvin, A, Bourke, E, Brand, T, Braun, R, Bull, J, Cardoso, P, Carter, D, Delahay, R, Ducommun, B, Duijf, P, Epp, T, Eskelinen, E, Fallah, M, Farber, D, Fernandez-Triana, J, Feyerabend, F, Florio, T, Friebe, M, Furuta, S, Gabrielsen, M, Gruber, J, Grybos, M, Han, Q, Heinrich, M, Helantera, H, Huber, M, Jeltsch, A, Jiang, F, Josse, C, Jurman, G, Kamiya, H, de Keersmaecker, K, Kristiansson, E, de Leeuw, F, Li, J, Liang, S, Lopez-Escamez, J, Lopez-Ruiz, F, Marchbank, K, Marschalek, R, Martin, C, Miele, A, Montagutelli, X, Morcillo, E, Nicoletti, R, Niehof, M, O'Toole, R, Ohtomo, T, Oster, H, Palma, J, Paterson, R, Peifer, M, Portilla, M, Portillo, M, Pritchard, A, Pusch, S, Raghava, G, Roberts, N, Ross, K, Schuele, B, Sergeant, K, Shen, J, Stella, A, Sukocheva, O, Uversky, V, Vanneste, S, Villet, M, Viveiros, M, Vorholt, J, Weinstock, C, Yamato, M, Zabetakis, I, Zhao, X, Ziegler, A, Aizat, W, Atlas, L, Bridges, K, Chakraborty, S, Deschodt, M, Domingues, H, Esfahlani, S, Falk, S, Guisado, J, Kane, N, Kueberuwa, G, Lau, C, Liang, D, Liu, E, Luu, A, Ma, C, Ma, L, Moyer, R, Norris, A, Panthee, S, Parsons, J, Peng, Y, Pinto, I, Reschke, C, Sillanpaa, E, Stewart, C, Uhle, F, Yang, H, Zhou, K, Zhu, S, Ashry, M, Bergsland, N, Berthold, M, Chen, C, Colella, V, Cuypers, M, Eskew, E, Fan, X, Gajda, M, Gonzalezlez-Prendes, R, Goodin, A, Graham, E, Groen, E, Gutierrez-Sacristan, A, Habes, M, Heffler, E, Higginbottom, D, Janzen, T, Jayaraman, J, Jibb, L, Jongen, S, Kinyanjui, T, Koleva-Kolarova, R, Li, Z, Liu, Y, Lund, B, Lussier, A, Mier, P, Moore, M, Nagler, K, Orme, M, Pearson, J, Prajapati, A, Saito, Y, Troder, S, Uchendu, F, Verloh, N, Voutchkova, D, Abu-Zaid, A, Bakkach, J, Baumert, P, Dono, M, Hanson, J, Herbelet, S, Hobbs, E, Kulkarni, A, Liu, S, Loft, N, Reddan, T, Senghore, T, Vindin, H, Xu, H, Bannon, R, Chen, B, Cheung, J, Cooper, J, Esnakula, A, Feghali, K, Ghelardi, E, Gnasso, A, Horbar, J, Lai, H, Ma, R, Pan, Z, Peres, M, Pranata, R, Seow, E, Sydes, M, Testoni, I, Westermair, A, Yang, Y, Afnan, M, Albiol, J, Albuquerque, L, Amir, S, Amiya, E, Amorim, R, An, Q, Andersen, S, Aplin, J, Argyropoulos, C, Asmann, Y, Assaeed, A, Atanasov, A, Atchison, D, Avery, S, Avillach, P, Baade, P, Backman, L, Badie, C, Baldi, A, Ball, E, Bardot, O, Barnett, A, Basner, M, Batra, J, Bazanova, O, Beale, A, Beddoe, T, Bell, M, Berezikov, E, Berners-Price, S, Bernhardt, P, Berry, E, Bessa, T, Billington, C, Birch, J, Blakely, R, Blaskovich, M, Blum, R, Boelaert, M, Bogdanos, D, Bosch, C, Bourgoin, T, Bouvard, D, Boykin, L, Bradley, G, Braun, D, Brownlie, J, Bruhl, A, Burt, A, Butler, L, Byrareddy, S, Byrne, H, Cabantous, S, Calatayud, S, Candal, E, Carlson, K, Casillas, S, Castelvetro, V, Caswell, P, Cavalli, G, Cerovsky, V, Chagoyen, M, Chen, D, Chen, H, Chen, J, Chen, Y, Cheng, C, Cheng, J, Chinapaw, M, Chinopoulos, C, Cho, W, Chong, L, Chowdhury, D, Chwalibog, A, Ciresi, A, Cockcroft, S, Conesa, A, Cook, P, Cooper, D, Coqueret, O, Corea, E, Costa, A, Costa, E, Coupland, C, Crawford, S, Cruz, A, Cui, H, Cui, Q, Culver, D, D'Angiulli, A, Dahms, T, Daigle, F, Dalgleish, R, Danielsen, H, Darras, S, Davidson, S, Day, D, Degirmenci, V, Demaison, L, Devriendt, K, Ding, J, Dogan, Y, Dong, X, Donner, C, Dressick, W, Drevon, C, Duan, H, Ducho, C, Dumaz, N, Dwarakanath, B, Ebell, M, Eisenhardt, S, Elkum, N, Engel, N, Erickson, T, Fairhead, M, Faville, M, Fejzo, M, Festa, F, Feteira, A, Flood-Page, P, Forsayeth, J, Fox, S, Franks, S, Frentiu, F, Frilander, M, Fu, X, Fujita, S, Galea, I, Galluzzi, L, Gani, F, Ganpule, A, Garcia-Alix, A, Gedye, K, Giordano, M, Giunta, C, Gleeson, P, Goarant, C, Gong, H, Gora, D, Gough, M, Goyal, R, Graham, K, Grande-Perez, A, Graves, P, Greidanus, H, Grice, D, Grunau, C, Gumulya, Y, Guo, Y, Gurevich, V, Gusev, O, Hacker, E, Hage, S, Hagen, G, Hahn, S, Haller, D, Hammerschmidt, S, Han, J, Han, R, Handfield, M, Hapuarachchi, H, Harder, T, Hardingham, J, Heck, M, Heers, M, Hew, K, Higuchi, Y, Hilaire, C, Hilton, R, Hodzic, E, Hone, A, Hongoh, Y, Hu, G, Huber, H, Hueso, L, Huirne, J, Hurt, L, Idborg, H, Ikeo, K, Ingley, E, Jakeman, P, Jensen, A, Jia, H, Jia, S, Jiang, J, Jiang, X, Jin, Y, Jo, D, Johnson, A, Johnston, M, Jonscher, K, Jorens, P, Jorgensen, J, Joubert, J, Jung, S, Junior, A, Kahan, T, Kamboj, S, Kang, Y, Karamanos, Y, Karp, N, Kelly, R, Kenna, R, Kennedy, J, Kersten, B, Khalaf, R, Khalid, J, Khatlani, T, Khider, T, Kijanka, G, King, S, Kluz, T, Knox, P, Kobayashi, T, Koch, K, Kohonen-Corish, M, Kong, X, Konkle-Parker, D, Korpela, K, Kostrikis, L, Kraiczy, P, Kratz, H, Krause, G, Krebsbach, P, Kristensen, S, Kumari, P, Kunimatsu, A, Kurdak, H, Kwon, Y, Lachat, C, Lagisz, M, Laky, B, Lammerding, J, Lange, M, Larrosa, M, Laslett, A, Laverman, G, Leclair, E, Lee, K, Lee, M, Li, G, Lieb, K, Lim, Y, Lindsey, M, Line, P, Liu, D, Liu, F, Liu, H, Lloyd, V, Lo, T, Locci, E, Loidl, J, Lorenzen, J, Lorkowski, S, Lovell, N, Lu, H, Lu, W, Lu, Z, Luengo, G, Lundh, L, Lysy, P, Mabb, A, Mack, H, Mackey, D, Mahdavi, S, Maher, P, Maher, T, Maity, S, Malgrange, B, Mamoulakis, C, Mangoni, A, Manke, T, Manstead, A, Mantalaris, A, Marsal, J, Marschall, H, Martin, F, Martinez-Raga, J, Martinez-Salas, E, Mathieu, D, Matsui, Y, Maza, E, Mccutcheon, J, Mckay, G, Mcmillan, B, Mcmillan, N, Meads, C, Medina, L, Merrick, B, Metzger, D, Meunier, F, Michaelis, M, Micheau, O, Mihara, H, Mintz, E, Mizukami, T, Moalic, Y, Mohapatra, D, Monteiro, A, Montes, M, Moran, J, Morozov, S, Mort, M, Murai, N, Murphy, D, Murphy, S, Murray, S, Naganawa, S, Nammi, S, Nasios, G, Natoli, R, Nguyen, F, Nicol, C, van Nieuwerburgh, F, Nilsen, E, Nobile, C, O'Mahony, M, Ohlsson, S, Olatunbosun, O, Olofsson, P, Ortiz, A, Ostrikov, K, Otto, S, Outeiro, T, Ouyang, S, Paganoni, S, Page, A, Palm, C, Paradies, Y, Parsons, M, Parsons, N, Pascal, P, Paul, E, Peckham, M, Pedemonte, N, Pellizzon, M, Petrelli, M, Pichugin, A, Pinto, C, Plevris, J, Pollesello, P, Polz, M, Ponti, G, Porcelli, P, Prince, M, 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G., Tiffon C., Tinnefeld P., Tjahjono D. H., Tolle F., Toth E., Del Tredici A. L., Tsapas A., Tsirigotis K., Turak A., Tzotzos G., Udo E. E., Utsumi T., Vaidyanathan S., Vaillant M., Valsesia A., Vandenbroucke R. E., Veiga F. H., Vendrell M., Vesk P. A., Vickers P., Victor V. M., Villemur R., Vohl M. -C., Voolstra C. R., Vuillemin A., Wakelin S., Waldron L., Walsh L. J., Wang A. Y., Wang F., Wang Y., Watanabe Y., Weigert A., Wen J. -C., Wham C., White E. P., Wiener J., Wilharm G., Wilkinson S., Willmann R., Wilson C., Wirth B., Wojan T. R., Wolff M., Wong B. M., Wu T. -W., Wuerbel H., Xiao X., Xu D., Xu J. W., Xue B., Yalcin S., Yan H., Yang E. -C., Yang S., Yang W., Ye Y., Ye Z. -Q., Yli-Kauhaluoma J., Yoneyama H., Yu Y., Yuan G. -C., Yuh C. -H., Zaccolo M., Zeng C., Zevnik B., Zhang L., Zhang Y., Zhang Z. -Y., Zhao Y., Zhou M., Zuberbier T., Aanei C. M., Ahmad R., Al-Lawama M., Alanio A., Allardyce J., Alonso-Caneiro D., Atack J. M., Baier D., Bansal A., Benezeth Y., Berbesque C., Berrevoet F., Biedermann P. H. W., Bijleveld E., Bittner F., Blombach F., van den Bos W., Boudreau S. A., Bramoweth A. D., Braubach O., Cai Y., Campbell M., Catry T., Chen X., Cheng S., Chung H. -J., Chavez-Fumagalli M. A., Conway A., Costa B. M., Cyr N., Dean L. T., Denzel M. S., Dlamini S. V., Dudley K. J., Dufies M., Ecke T., Eckweiler D., Eixarch E., El-Adawy H., Emmrich J. V., Eustace A. J., Falter-Wagner C. M., Farhoudi R., Fuss J., Gao J., Gill M. R., Gloyn L., Goggs R., Govinden U., Greene G., Greiff V., Grundle D. S., Gruneberg P., Gumede N., Haore G., Harrison P., Hoenner X., Hojsgaard D., Hori H., Ikonomopoulou M. P., Jeurissen P., Johnson D. M., Kabra D., Kamagata K., Karmakar C., Kasian O., Kaye L. K., Khan M. M., Kim Y. -M., Kish J. K., Kobold S., Kohanbash G., Kohls G., Kugler J. -M., Kumar G., Lacy-Colson J., Latif A., Lauschke V. M., Li B., Lim C. J., Liu X., Lu J. -J., Lu Q., Mahavadi P., Marzocchi U., McGarrigle C. A., van Meerten T., Min R., Moal I., Molari M., Molleman L., Mondal S. R., van de Mortel T., Moss W. N., Moultos O. A., Mukherjee M., Nakayama K., Narayan E., Neumann P. -A., Nie J., Nie Y., Niemeyer F., Nolan F., Nwaiwu O., Oldenmenger W. H., Olumayede E., Ou J., Pallebage-Gamarallage M., Pearce S. P., Pelkonen T., Pelleri M. C., Pereira J. L., Pheko M., Pinto K. A., Piovesan A., Pluess M., Podolsky I. M., Prescott J., Qi D., Qi X., Raikou V. D., Ranft A., Rhodes J., Rotge J. -Y., Rowe A. D., Saggar M., Schuon R. A., Shahid S., Shalchyan V., Shirvalkar P., Shiryayev O., Singh J., Smout M. J., Soares A., Song C., Srivastava K., Srivastava R. K., Sun J., Szabo A., Szymanski W., Tai C. N. P., Takeuchi H., Tanadini-Lang S., Tang F., Tao W., Theron G., Tian C. F., Tian Y. -S., Tuttle L. M., Valenti A., Verlot P., Walker M., Wang J., Welter D., Winslade M., Wu D., Wu Y. -R., Xiao H., Xu B., Xu Z., Yang D., Yang M., Yankilevich P., You Y., Yu C., Zhan J., Zhang G., Zhang K., Zhang T., Zhao G., Zhao J., Zhou X., Zhu Z., Ajani P. A., Anazodo U. C., Bagloee S. A., Bail K., Bar I., Bathelt J., Benkeser D., Bernier M. L., Blanchard A. M., Boakye D. W., Bonatsos V., Boon M. H., Bouboulis G., Bromfield E., Brown J., Bul K. C. M., Burton K. J., Butkowski E. G., Carroll G., Chao F., Charrier E. E., Chen Y. -C., Choi J. R., Christoffersen T., Comel J. C., Cosse C., Cui Y., van Dessel P., Diodato D., Duffey M., Dutt A., Egea L. G., El-Said M., Faye M., Fernandez-Fernandez B., Foley K. G., Founou L. L., Fu F., Gadelkareem R. A., Galimov E., Garip G., Gemmill A., Gouil Q., Grey J., Gridneva Z., Grothe M. J., Grebert T., Guerrero F., Guignard L., Haenssgen M. J., Hasler D., Holgate J. Y., Huang A., Hulse-Kemp A. M., Jean-Quartier C., Jeon S. -M., Jia Y., Jutzeler C., Kalatzis P., Karim M., Karsay K., Keitel A., Kempe A., Keown J. R., Khoo C. M., Khwaja N., Kievit R. A., Kosanic S., Koutoukidis D. A., Kramer P., Kumar D., Kirag N., Lanza G., Le T. D., Leem J. W., Leightley D., Leite A., Lercher L., Li Y., Lim R., Lima L. R. A., Lin L., Ling T., Liu Y., Liu Z., Lu Y., Lum F. M., Luo H., Machhi J., Macleod A., Macwan I., Madala H. R., Madani N., de Maio N., Makowiecki K., Mallinson D. J., Margelyte R., Maria C., Markonis Y., Marsili L., Mavoa S., McWilliams L., Megersa M., Souto-Maior C., Menichetti J., Mercieca-Bebber R., Miller J. J., Minde D. -P. M., Minges A., Mishra E., Mishra V. R., Moores C., Morrice N., Moskalensky A. E., Navarin N., Negera E., Nolet P., Nordberg A., Norden R., Nowicki J. P., Olova N., Olszewski P., Onzima R., Pan C. -L., Park C., Park D. I., Park S., Patil C. D., Pedro S. A., Perry S. R., Peter J., Peterson B. M., Pezzuolo A., Pozdnyakov I., Qian S., Qin L., Rafe A., Raote I., Raza A., Rebl H., Refai O., Regan T., Richa T., Richardson M. F., Robinson K. R., Rossoni L., Rouet R., Safaei S., Schneeberger P. H. H., Schwotzer D., Sebastian A., Selinski J., Seltmann S., Sha F., Shalev N., Shang J. -L., Singer J., Singh M., Smith T., Solomon-Moore E., Song L., Soraggi S., Stanley R., Steckhan N., Strobl F., Subissi L., Supriyanto I., Surve C. R., Suzuki T., Syme C., Sorelius K., Tang Y., Tantawy M., Tennakoon S., Teseo S., Toelzer C., Tomov N., Tovar M., Tran L., Tripathi S., Tuladhar A. M., Ukubuiwe A. C., Ung C. O. L., Valgepea K., Vatanparast H., Vidal A., Wang Q., Watari R., Webster R., Wei J., Wibowo D., Wingenbach T. S. H., Xavier R. M., Xiao S., Xiong P., Xu S., Yao R., Yao W., Yin Q., Zaitsu M., Zeineb Z., Zhan X. -Y., Zhang R., Zhang W., Zheng S., Zhou B., Ahmad H., Akinwumi S. A., Albery G. F., Alhowimel A., Ali J., Alshehri M., Alsuhaibani M., Anikin A., Azubuike S. O., Bach-Mortensen A., Baltiansky L., Bartas M., Belachew K. Y., Bhardwaj V., Binder K., Bland N. S., Boah M., Bullen B., Calabro G. E., Callahan T. J., Cao B., Chalmers K., Chang W., Che Z., Chen A. T. Y., Chen Z., Choi Y., Chowdhury M. A. K., Christensen M. R., Cooke R. S. C., Cottini M., Covington N. V., Cunningham C., Delarocque J., Devos L., Dhar A. R., Ding K. -F., Dong K., Dong Z., Dreyer N., Ekstrand C., Fardet T., Feleke B. E., Feurer T., Freitas A., Gao T., Giganti F., Grabowski P., Guerra-Mora J. R., Guo C., Guo X., Gupta H., He S., Heijne M., Heinemann S., Hogrebe A., Huang Z., Iskander-Rizk S., Iyer L. M., Jahan Y., James A. S., Joel E., Joffroy B., Jegousse C., Kambondo G., Karnati P., Kaya C., Ke A., Kelly D., Kickert R., Kidibule P. E., Kieselmann J. P., Kim H. J., Kitazawa T., Lamberts A., Liang H., Linn S. N., Litfin T., Liusuo W., Lygirou V., Mahato A. K., Mai Z. -M., Major R. W., Mali S., Mallis P., Mao W., Marvin-Dowle K., Mason L. D., Merideth B., Merino-Plaza M. 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- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science.
- Published
- 2019
11. Contributor contact details
- Author
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Sadler, M.J., primary, Binns, N., additional, Harland, J., additional, Mäkinen, K.K., additional, Duttaroy, A.K., additional, Lukasik, K.V., additional, Child, R.B., additional, Shortt, C., additional, Kies, A.K., additional, Lockyer, S., additional, Rowland, I., additional, de la Hunty, A., additional, Scott, J., additional, Tiihonen, K.K., additional, Lyyra, M., additional, Riihinen, K., additional, Sarkkinen, E., additional, Craig, S.A.S., additional, Tenning, P., additional, Livingstone, K.M., additional, Arens, U., additional, Poon, T., additional, Baldwin, N., additional, Murray, R., additional, and Holdsworth, J., additional
- Published
- 2014
- Full Text
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12. Authorised EU health claims for intense sweeteners and sugar replacers
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Shortt, C., primary
- Published
- 2014
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13. Accuracy of whole-body low-dose multidetector CT (WBLDCT) versus skeletal survey in the detection of myelomatous lesions, and correlation of disease distribution with whole-body MRI (WBMRI)
- Author
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Gleeson, T. G., Moriarty, J., Shortt, C. P., Gleeson, J. P., Fitzpatrick, P., Byrne, B., McHugh, J., O’Connell, M., O’Gorman, P., and Eustace, S. J.
- Published
- 2009
- Full Text
- View/download PDF
14. Responses of iliac conduit artery and hindlimb resistance vessels to luminal hyperfructosemia in the anaesthetized pig
- Author
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Ruane-OʼHora, T., Edge, D., Shortt, C. M., Markos, F., and Noble, M. I. M.
- Published
- 2013
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15. Staff Radiation Doses to the Lower Extremities in Interventional Radiology
- Author
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Shortt, C. P., Al-Hashimi, H., Malone, L., and Lee, M. J.
- Published
- 2007
- Full Text
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16. Thyroid Dose During Neurointerventional Procedures: Does Lead Shielding Reduce the Dose?
- Author
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Shortt, C. P., Fanning, N. F., Malone, L., Thornton, J., Brennan, P., and Lee, M. J.
- Published
- 2007
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17. THE IMPORTANCE OF INTRODUCING COLONOSCOPY SCREENING IN THE ADULT CYSTIC FIBROSIS PATIENTS: A SINGLE TERTIARY REFERRAL CENTRE ANALYSIS
- Author
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Doherty, J, additional, McCarthy, M, additional, Fleming, C, additional, Shortt, C, additional, Zulquernain, S, additional, and Plant, BJ, additional
- Published
- 2020
- Full Text
- View/download PDF
18. Irish thoracic society: Proceeds of annual scientific meeting held Friday & Saturday 8th & 9th November, 1996
- Author
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Coakley, R., O’Neill, S., Coakley, R., Glynn, P., O’Neill, S., Finlay, G. A., Russell, K. J., McMahon, K., D’Arcy, E. M., Masterson, J. B., Fitzgerald, M. X., O’Connor, C. M., O’Driscoll, L. R., Finlay, G. A., Fitzgerald, M. X., O’Connor, C. M., McGarvey, L. P. A., Forsythe, P., Heaney, L. G., MacMahon, J., Ennis, M., Leonard, C., Tormey, V., Burke, C. M., Poulter, L. W., Keatings, V. M., FitzGerald, M. X., Barnes, P. J., Harty, H. R., Corfield, D. R., Adams, L., Schwartzstein, R. M., Kiely, J. F., Buckley, A., Shiels, P., Deegan, P. C., Maurer, B., McNicholas, W. T., Dunlop, K. A., Martin, B., Riley, M., Shields, M. D., Glynn, P., Kilgallen, I., Coakley, R., O’Neill, S., McElvaney, N. G., Cervantes-Laurean, D., Wehr, N., Gabriele, K., Robinson, W., Moss, J., Levine, R. L., Urbach, V., Walsh, D., Harvey, B., McElroy, M. C., Pittet, J-F., Allen, L., Wiener-Kroonish, J., Dobbs, L. G., O’Donnell, D. M., McMahon, K. J., O’Connor, C., Fitzgerald, M. X., McGuirk, P., Mahon, B., Griffin, F., Mills, K. H. G., Murphy, R., Brijker, F., Mulloy, E., Cohen Tervaert, J. W., Walshe, J., O’Neill, S., McGarvey, L. P. A., Heaney, L. G., Lowry, R. C., Shepherd, D. R. T., MacMahon, J., Gamble, L. A., Carton, C., Memon, R., Winter, D., Chan, A., Aherne, T., O’Reilly, P., Harbison, J. A., McNicholas, W. T., O’Callaghan, S., Mulloy, E., Keane, M., McKenna, M., Woods, S., O’Neill, S., Lamon, A., Leonard, C., Faul, J., Murphy, M., Burke, C. M., Tormey, V., Riley, M., Porszasz, J., Engelen, M. P. K. J., Brundage, B., Wasserman, K., Sweeney, M., O’Regan, R. G., McLoughlin, P., Sweeney, M., Honner, V., Sinnott, B., O’Regan, R. G., McLoughlin, P., Kilgallen, I., O’Neill, S., McGrath, D. S., Kiely, J., Cryan, B., Bredin, C. P., McGrath, D. S., Shortt, C., Stack, M., Kelleher, N., Bredin, C. P., Russell, K. J., McRedmond, J., Mulkerji, N., Keatings, V., Fitzgerald, M. X., O’Connor, C. M., Boylan, G. M., McElroy, M. C., Dobbs, L. G., Forsythe, P., McGarvey, L. P. A., Cross, L. J. M., Ennis, M., Heaney, L. G., MacMahon, J., Davern, S., O’Connor, C. M., McDonnell, T. J., Kiely, J. L., Lawless, G., Cunningham, S., McNicholas, W. T., Lordan, J., Clancy, L., Manning, P., Plunkett, P., Donaghy, D., Kiely, J., McDonnell, T. J., Ben Musbah, F., Loftus, B. G., Ben Musbah, F., Loftus, B. G., Rutherford, R., Watson, S. N. E., Gilmartin, J. J., Henry, M., Mullins, G., Brennan, N., Kiely, J. L., Deegan, P. C., and McNicholas, W. T.
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- 1998
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19. HYPERTONIC SALINE ADMINISTRATION VIA A POSITIVE-EXHALATION PRESSURE DEVICE (PEP) IN ADULT CYSTIC FIBROSIS PATIENTS WHO HAVE FAILED STANDARD NEBULIZED STRATEGIES - A NOVEL THERAPEUTIC APPROACH: 536
- Author
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OʼConnell, O. J., OʼFarrell, C., Harrisson, M., Shortt, C., Henry, M., and Plant, B. J.
- Published
- 2008
20. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
- Author
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Brown, P. Zhou, Y. Tan, A.-C. El-Esawi, M.A. Liehr, T. Blanck, O. Gladue, D.P. Almeida, G.M.F. Cernava, T. Sorzano, C.O. Yeung, A.W.K. Engel, M.S. Chandrasekaran, A.R. Muth, T. Staege, M.S. Daulatabad, S.V. Widera, D. Zhang, J. Meule, A. Honjo, K. Pourret, O. Yin, C.-C. Zhang, Z. Cascella, M. Flegel, W.A. Goodyear, C.S. van Raaij, M.J. Bukowy-Bieryllo, Z. Campana, L.G. Kurniawan, N.A. Lalaouna, D. Hüttner, F.J. Ammerman, B.A. Ehret, F. Cobine, P.A. Tan, E.-C. Han, H. Xia, W. McCrum, C. Dings, R.P.M. Marinello, F. Nilsson, H. Nixon, B. Voskarides, K. Yang, L. Costa, V.D. Bengtsson-Palme, J. Bradshaw, W. Grimm, D.G. Kumar, N. Martis, E. Prieto, D. Sabnis, S.C. Amer, S.E.D.R. Liew, A.W.C. Perco, P. Rahimi, F. Riva, G. Zhang, C. Devkota, H.P. Ogami, K. Basharat, Z. Fierz, W. Siebers, R. Tan, K.H. Boehme, K.A. Brenneisen, P. Brown, J.A.L. Dalrymple, B.P. Harvey, D.J. Ng, G. Werten, S. Bleackley, M. Dai, Z. Dhariwal, R. Gelfer, Y. Hartmann, M.D. Miotla, P. Tamaian, R. Govender, P. Gurney-Champion, O.J. Kauppila, J.H. Zhang, X. Echeverría, N. Subhash, S. Sallmon, H. Tofani, M. Bae, T. Bosch, O. Cuív, P.O. Danchin, A. Diouf, B. Eerola, T. Evangelou, E. Filipp, F. Klump, H. Kurgan, L. Smith, S.S. Terrier, O. Tuttle, N. Ascher, D.B. Janga, S.C. Schulte, L.N. Becker, D. Browngardt, C. Bush, S.J. Gaullier, G. Ide, K. Meseko, C. Werner, G.D.A. Zaucha, J. Al-Farha, A.A. Greenwald, N.F. Popoola, S.I. Rahman, S. Xu, J. Yang, S.Y. Hiroi, N. Alper, O.M. Baker, C.I. Bitzer, M. Chacko, G. Debrabant, B. Dixon, R. Forano, E. Gilliham, M. Kelly, S. Klempnauer, K.-H. Lidbury, B.A. Lin, M.Z. Lynch, I. Ma, W. Maibach, E.W. Mather, D.E. Nandakumar, K.S. Ohgami, R.S. Parchi, P. Tressoldi, P. Xue, Y. Armitage, C. Barraud, P. Chatzitheochari, S. Coelho, L.P. Diao, J. Doxey, A.C. Gobet, A. Hu, P. Kaiser, S. Mitchell, K.M. Salama, M.F. Shabalin, I.G. Song, H. Stevanovic, D. Yadollahpour, A. Zeng, E. Zinke, K. Alimba, C.G. Beyene, T.J. Cao, Z. Chan, S.S. Gatchell, M. Kleppe, A. 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Zaritsky, A. Zhang, Y. Zhao, H. Zuckerman, H. Lyu, R. Pullan, W. RELISH Consortium
- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science. © The Author(s) 2019. Published by Oxford University Press.
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- 2019
21. FERMENTED MILKS | Other Relevant Products
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McKevith, B., primary and Shortt, C., additional
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- 2003
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22. Predictors of Mortality in Adults With Cystic Fibrosis
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Courtney, J. M., Bradley, J., Mccaughan, J., O’connor, T. M., Shortt, C., Bredin, C. P., Bradbury, I., and Elborn, J. S.
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- 2007
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23. Irish thoracic society: Proceedings of annual scientific meeting held in Cork on 5th & 6th November, 1993
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Chan, K. H., Singh, H. P., Aherne, T., Carabine, U., Gilliland, H., Johnston, J. R., Lowry, K. G., McGuigan, J., Cosgrove, J., Veerasingham, D., McCarthy, J., Hurley, J., Wood, A. E., Gilliland, R., McGuigan, J. A., McManus, K. G., Wilkinson, P., Johnston, L. C., MacMahon, J., Wilson, D., Austin, C., Anikin, V., McManus, K., McGuigan, J., McManus, K., Anikin, V., Gibbons, J. R. P., McGuigan, J., Sharkey, R., Long, M., Maree, A., O’Neill, S., Maguire, C. P., Hayes, J. P., Masterson, J., Fitzgerald, M. X., Hayes, M., Maguire, C. P., Hayes, J. P., Masterson, J., Fitzgerald, M. X., Quigley, C., Mofidi, A., Mofidi, R., Fitzgerald, M. X., O’Neill, M., Watson, J. B. G., O’Halloran, E. T., Shortt, C., Taylor, M., Holland, C., O’Lorcain, P., Taylor, M., Holland, C., O’Lorcain, P., Pathmakanthan, S., Sreenan, S., Power, C. K., Poulter, L. W., Burke, C. M., Reilly, D., Pathmakanthan, S., Sreenan, S., Doyle, S., Burke, C. M., Sreenan, S., Power, C., Pathmakanthan, S., Goggin, A., Burke, C. M., Poulter, L. W., Sreenan, S., Doyle, S., Pathmakanthan, S., Poulter, L. W., Burke, C. M., Sreenan, S., Debenham, P., Pathmakanthan, S., Burke, C. M., Poulter, L. W., Southey, A., O’Connor, C. M., Fitzgerald, M. X., Bourke, W. J., McDonnell, T. J., Buck, J. B., Magee, T. R. A., Lowry, R. C., Graham, A. N. J., Owens, W. A., Kelly, S. B., McGuigan, J. A., Costelloe, R. W., Ryan, J., Collins, J., Guerin, D., Rooney, D., Long, E., O’Donnell, M., O’Neill, S., Cotter, T. P., Bredin, C. P., Buick, J. B., Lowry, R. C., MacMahon, J. J., Finlay, G., Concannon, D., McDonnell, T. J., Reid, P. T., Alderdice, J., Carson, J., Sinnamon, D. G., Murphy, S., Scott, T., Keane, C. T., Walsh, J. B., Coakley, D., McKeown, D., Kelly, P., Clancy, L., Kiely, J. L., Cryan, B., Bredin, C. P., Killeen, P., Farrell, S., Kelly, P., Clancy, L., Kiely, J. L., O’Riordan, D. M., Sheehan, S., Curtain, J., Hogan, J., Bredin, C. P., Malone, A., Ahmed, S., Watson, J. B. G., Murphy, M., Fennell, W., Ahmed, S., Watson, J. B. G., Aherne, T., Keohane, C., O’Neill, M., Gleeson, C. M., McGuigan, J., Ritchie, A. J., Russell, S. E. H., Molloy, E., Keane, M., Coakley, R., Costello, R., Condron, C., Watson, R. G. W., O’Neill, S., Kelly, C., Redmond, H., Watson, W., Burke, P., Bouchier-Hayes, D., Donnelly, S. C., Haslett, C., Dransfield, I., Robertson, C. E., Carter, D. C., Ross, J. A., Grant, I. S., Tedder, T. F., Doyle, S., Sreenan, S., Pathmakanthan, S., Burke, C. M., Heaney, L. G., Cross, L. J. M., Stanford, C. F., Ennis, Madeleine, Sreenan, S., Pathmakanthan, S., Power, C., Goggin, A., Poulter, L. W., Burke, C. M., Murphy, S., Scott, T., Keane, C. T., Walsh, J. B., Coakley, D., O’Riordan, D. M., Gergely, L., Deng, N., Rose, R. M., Hennessy, T., Hickey, L., Thornton, L., Collum, C., Durity, M., Power, J., Johnson, H., Lee, B., Doherty, E., Kelly, E., McDonnell, T., McKeown, D., Kelly, P., Clancy, L., Wilkinson, P., Varghese, G., Anikin, V., Gibbons, J., McManus, K., McGuigan, J., Reid, P. T., Gower, N. H., and Rudd, R. M.
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- 1994
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24. Irish thoracic society: Proceedings of Annual Meeting held in Galway on November 6th & 7th, 1992
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Quigley, C., Mofidi, R., Liu, G., O’Connor, C., FitzGerald, M. X., Johnson, H., MacDonnell, T., Lee, B., Kelly, E., Doherty, E., McCarthy, J. F., Hurley, J., Wood, A. E., Lynch, V. P., Ellias, E., Tahir, M., Asad Ali, S., Istarabadi, M., Hussain, R., McGovern, Ms. E., Luke, D. A., Murphy, M., Mealy, K., Little, D., Burke, P., O’Neill, S., Broe, P., Guidon, M., Long, M., Reid, P. T., MacMahon, J., Babu, M. V. S., Watson, J. B. G., O’Halloran, E. T., Kumar, P., Shortt, C., Murphy, S., Hegarty, V., Scott, T., Keane, C. T., Walsh, J. B., Coakley, D., Clancy, L., Corcoran, P., Kelly, P., Healy, T., Moore, H., Cormican, M., Flynn, J., Gilmartin, J. J., O’Connor, H., Power, W., McNicholas, N., Lindsay, P. J., Noone, D., Glennon, M., Smith, T., Gannon, F., O’Dwyer, R., Stack, N., Kyne, K., McHale, E., Sidhu, P., O’ Sullivan, R., Callaghan, J., Wilkinson, P., McKenzie, G., O’Connor, C. M., Ryan, M., Shanahan, P., O’Donnel, N., Conlon, P., O’Neill, G., Long, H., Carmody, M., Keogh, B., Donohoe, J., Walshe, J., Lyons, D. J., Madrigal, L., Luke, D., McKinley, R. K., Jamison, J. P., Sreenan, S. K., Power, C. K., Pathmakanthan, S., Burke, C. M., Poulter, L. W., O’Donovan, D. A., Bouchier-Hayes, D. M., Kelly, C., Grace, P., Redmond, H. P., Monkhouse, W. S., Bouchier-Hayes, D., Bourke, W. J., McDonnell, T. J., Cotter, T. P., Bredin, C. P., Hayes, J. P., Ward, K., Muldowney, F., Othman, S., Conroy, R., Collum, C., Durity, M., Power, J., Gaffney, K., Southey, A., Keane, J., Byrne, N., Hayes, J., Magee, T. R. A., Buick, J. B., Lowry, R. C., Kelly, C. J., Shou, J., Gallagher, H., Daly, J. M., Bouchier-Hayes, D, Donnelly, S. C., Haslett, C., Grant, I. S., Streiter, R. M., Kunkel, S. L., Walz, A., Robertson, C. R., Carter, D. C., Pollock, A. J., O’Neill, M., Dockrell, D., Rooney, M., Memon, I., Loftus, B. G., Mulcahy, R., Periappuram, Murphy, P., Mulroy, Sr. M., Taylor, M. R. H., Costello, R., McNicholas, W. T., Watson, R. G. W., and O’Neill, S. J.
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- 1993
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25. Large expert-curated database for benchmarking document similarity detection in biomedical literature search
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Brown, P., Zhou, Y., Tan, A. -C., El-Esawi, M. A., Liehr, T., Blanck, O., Gladue, D. P., Almeida, G. M. F., Cernava, T., Sorzano, C. O., Yeung, A. W. K., Engel, M. S., Chandrasekaran, A. R., Muth, T., Staege, M. S., Daulatabad, S. V., Widera, D., Zhang, J., Meule, A., Honjo, K., Pourret, O., Yin, C. -C., Zhang, Z., Cascella, M., Flegel, W. A., Goodyear, C. S., van Raaij, M. J., Bukowy-Bieryllo, Z., Campana, L. G., Kurniawan, N. A., Lalaouna, D., Huttner, F. J., Ammerman, B. A., Ehret, F., Cobine, P. A., Tan, E. -C., Han, H., Xia, W., Mccrum, C., Dings, R. P. M., Marinello, F., Nilsson, H., Nixon, B., Voskarides, K., Yang, L., Costa, V. D., Bengtsson-Palme, J., Bradshaw, W., Grimm, D. G., Kumar, N., Martis, E., Prieto, D., Sabnis, S. C., Amer, S. E. D. R., Liew, A. W. C., Perco, P., Rahimi, F., Riva, G., Zhang, C., Devkota, H. P., Ogami, K., Basharat, Z., Fierz, W., Siebers, R., Tan, K. H., Boehme, K. A., Brenneisen, P., Brown, J. A. L., Dalrymple, B. P., Harvey, D. J., Ng, G., Werten, S., Bleackley, M., Dai, Z., Dhariwal, R., Gelfer, Y., Hartmann, M. D., Miotla, P., Tamaian, R., Govender, P., Gurney-Champion, O. J., Kauppila, J. H., Zhang, X., Echeverria, N., Subhash, S., Sallmon, H., Tofani, M., Bae, T., Bosch, O., Cuiv, P. O., Danchin, A., Diouf, B., Eerola, T., Evangelou, E., Filipp, F., Klump, H., Kurgan, L., Smith, S. S., Terrier, O., Tuttle, N., Ascher, D. B., Janga, S. C., Schulte, L. N., Becker, D., Browngardt, C., Bush, S. J., Gaullier, G., Ide, K., Meseko, C., Werner, G. D. A., Zaucha, J., Al-Farha, A. A., Greenwald, N. F., Popoola, S. I., Rahman, S., Xu, J., Yang, S. Y., Hiroi, N., Alper, O. M., Baker, C. I., Bitzer, M., Chacko, G., Debrabant, B., Dixon, R., Forano, E., Gilliham, M., Kelly, S., Klempnauer, K. -H., Lidbury, B. A., Lin, M. Z., Lynch, I., Ma, W., Maibach, E. W., Mather, D. E., Nandakumar, K. S., Ohgami, R. S., Parchi, P., Tressoldi, P., Xue, Y., Armitage, C., Barraud, P., Chatzitheochari, S., Coelho, L. P., Diao, J., Doxey, A. C., Gobet, A., Hu, P., Kaiser, S., Mitchell, K. M., Salama, M. F., Shabalin, I. G., Song, H., Stevanovic, D., Yadollahpour, A., Zeng, E., Zinke, K., Alimba, C. G., Beyene, T. J., Cao, Z., Chan, S. S., Gatchell, M., Kleppe, A., Piotrowski, M., Torga, G., Woldesemayat, A. A., Cosacak, M. I., Haston, S., Ross, S. A., Williams, R., Wong, A., Abramowitz, M. K., Effiong, A., Lee, S., Abid, M. B., Agarabi, C., Alaux, C., Albrecht, D. R., Atkins, G. J., Beck, C. R., Bonvin, A. M. J. J., Bourke, E., Brand, T., Braun, R. J., Bull, J. A., Cardoso, P., Carter, D., Delahay, R. M., Ducommun, B., Duijf, P. H. G., Epp, T., Eskelinen, E. -L., Fallah, M., Farber, D. B., Fernandez-Triana, J., Feyerabend, F., Florio, T., Friebe, M., Furuta, S., Gabrielsen, M., Gruber, J., Grybos, M., Han, Q., Heinrich, M., Helantera, H., Huber, M., Jeltsch, A., Jiang, F., Josse, C., Jurman, G., Kamiya, H., de Keersmaecker, K., Kristiansson, E., de Leeuw, F. -E., Li, J., Liang, S., Lopez-Escamez, J. A., Lopez-Ruiz, F. J., Marchbank, K. J., Marschalek, R., Martin, C. S., Miele, A. E., Montagutelli, X., Morcillo, E., Nicoletti, R., Niehof, M., O'Toole, R., Ohtomo, T., Oster, H., Palma, J. -A., Paterson, R., Peifer, M., Portilla, M., Portillo, M. C., Pritchard, A. L., Pusch, S., Raghava, G. P. S., Roberts, N. J., Ross, K., Schuele, B., Sergeant, K., Shen, J., Stella, A., Sukocheva, O., Uversky, V. N., Vanneste, S., Villet, M. H., Viveiros, M., Vorholt, J. A., Weinstock, C., Yamato, M., Zabetakis, I., Zhao, X., Ziegler, A., Aizat, W. M., Atlas, L., Bridges, K. M., Chakraborty, S., Deschodt, M., Domingues, H. S., Esfahlani, S. S., Falk, S., Guisado, J. L., Kane, N. 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D., Pedro, S. A., Perry, S. R., Peter, J., Peterson, B. M., Pezzuolo, A., Pozdnyakov, I., Qian, S., Qin, L., Rafe, A., Raote, I., Raza, A., Rebl, H., Refai, O., Regan, T., Richa, T., Richardson, M. F., Robinson, K. R., Rossoni, L., Rouet, R., Safaei, S., Schneeberger, P. H. H., Schwotzer, D., Sebastian, A., Selinski, J., Seltmann, S., Sha, F., Shalev, N., Shang, J. -L., Singer, J., Singh, M., Smith, T., Solomon-Moore, E., Song, L., Soraggi, S., Stanley, R., Steckhan, N., Strobl, F., Subissi, L., Supriyanto, I., Surve, C. R., Suzuki, T., Syme, C., Sorelius, K., Tang, Y., Tantawy, M., Tennakoon, S., Teseo, S., Toelzer, C., Tomov, N., Tovar, M., Tran, L., Tripathi, S., Tuladhar, A. M., Ukubuiwe, A. C., Ung, C. O. L., Valgepea, K., Vatanparast, H., Vidal, A., Wang, Q., Watari, R., Webster, R., Wei, J., Wibowo, D., Wingenbach, T. S. H., Xavier, R. M., Xiao, S., Xiong, P., Xu, S., Yao, R., Yao, W., Yin, Q., Zaitsu, M., Zeineb, Z., Zhan, X. -Y., Zhang, R., Zhang, W., Zheng, S., Zhou, B., Ahmad, H., Akinwumi, S. A., Albery, G. F., Alhowimel, A., Ali, J., Alshehri, M., Alsuhaibani, M., Anikin, A., Azubuike, S. O., Bach-Mortensen, A., Baltiansky, L., Bartas, M., Belachew, K. Y., Bhardwaj, V., Binder, K., Bland, N. S., Boah, M., Bullen, B., Calabro', Giovanna Elisa, Callahan, T. J., Cao, B., Chalmers, K., Chang, W., Che, Z., Chen, A. T. Y., Chen, Z., Choi, Y., Chowdhury, M. A. K., Christensen, M. R., Cooke, R. S. C., Cottini, M., Covington, N. V., Cunningham, C., Delarocque, J., Devos, L., Dhar, A. R., Ding, K. -F., Dong, K., Dong, Z., Dreyer, N., Ekstrand, C., Fardet, T., Feleke, B. E., Feurer, T., Freitas, A., Gao, T., Gebremedhin, Giganti, F., Grabowski, P., Guerra-Mora, J. R., Guo, C., Guo, X., Gupta, H., He, S., Heijne, M., Heinemann, S., Hogrebe, A., Huang, Z., Iskander-Rizk, S., Iyer, L. M., Jahan, Y., James, A. S., Joel, E., Joffroy, B., Jegousse, C., Kambondo, G., Karnati, P., Kaya, C., Ke, A., Kelly, D., Kickert, R., Kidibule, P. E., Kieselmann, J. P., Kim, H. J., Kitazawa, T., Lamberts, A., Liang, H., Linn, S. N., Litfin, T., Liusuo, W., Lygirou, V., Mahato, A. K., Mai, Z. -M., Major, R. W., Mali, S., Mallis, P., Mao, W., Marvin-Dowle, K., Mason, L. D., Merideth, B., Merino-Plaza, M. J., Merlaen, B., Messina, R., Mishra, A. K., Muhammad, J., Musinguzi, C., Nanou, A., Naqash, A., Nguyen, J. T., Nguyen, T. T. H., Ni, D., Nida, Notcovich, S., Ohst, B., Ollivier, Q. R., Osses, D. F., Peng, X., Plantinga, A., Pulia, M., Rafiq, M., Raman, A., Raucher-Chene, Rawski, R., Ray, A., Razak, L. A., Rudolf, K., Rusch, P., Sadoine, M. L., Schmidt, A., Schurr, R., Searles, S., Sharma, S., Sheehan, B., Shi, C., Shohayeb, B., Sommerlad, A., Strehlow, J., Sun, X., Sundar, R., Taherzadeh, G., Tahir, N. D. M., Tang, J., Testa, J., Tian, Z., Tingting, Q., Verheijen, G. P., Vickstrom, C., Wang, T., Wang, X., Wang, Z., Wei, P., Wilson, A., Wyart, Yassine, A. -A., Yousefzadeh, A., Zare, A., Zeng, Z., Zhang, H., Zhou, J., Zhu, D., Adamo, V., Adeyemo, A. A., Aggelidou, M., Al-Owaifeer, A. M., Al-Riyami, A. Z., Alzghari, S. K., Andersen, V., Angus, K., Asaduzzaman, M., Asady, H., Ato, D., Bai, X., Baines, R. L., Ballantyne, M., Ban, B., Beck, J., Ben-Nafa, W., Black, E., Blancher, A., Blankstein, R., Bodagh, N., Borges, P., Brooks, A., Brox-Ponce, J., Brunetti, A., Canham, C. D., Carninci, P., Carvajal, R., Chang, S. C., Chao, J., Chatterjee, P., Chen, L., Chhatriwalla, A. K., Chikowe, I., Chuang, T. -J., Collevatti, R. G., Cornejo, D. A. V., Cuenda, A., Dao, M., Dauga, D., Deng, Z., Devkota, K., Doan, L. V., Elewa, Y. H. A., Fan, D., Faruk, M., Feifei, S., Ferguson, T. S., Fleres, F., Foster, E. J., Foster, S., Furer, T., Gao, Y., Garcia-Rivera, E. J., Gazdar, A., George, R. B., Ghosh, S., Gianchecchi, E., Gleason, J. M., Hackshaw, A., Hall, A., Hall, R., Harper, P., Hogg, W. E., Huang, G., Hunter, K. E., Ijzerman, A. P., Jesus, C., Jian, G., Lewis, J. S., Kanj, S. S., Kaur, H., Kheir, F., Kichatova, V. S., Kiyani, M., Klein, R., Kovesi, T., Kraschnewski, J. L., Kumar, A. P., Labutin, D., Lazo-Langner, A., Leclercq, G., Li, M., Li, Q., Li, T., Liao, W. -T., Liao, Z. -Y., Lin, J., Lizer, J., Lobreglio, G., Lowies, C., Lu, C., Majeed, H., Martin, A., Martinez-Sobrido, L., Meresh, E., Middelveen, M., Mohebbi, A., Mota, J., Mozaheb, Z., Muyaya, L., Nandhakumar, A., Ng, S. H. X., Obeidat, M., Oh, D. -H., Owais, M., Pace-Asciak, P., Panwar, A., Patterson, C., Penagos-Tabaree, F., Pianosi, P. T., Pinzi, V., Pridans, C., Psaroulaki, A., Pujala, R. K., Pulido-Arjona, L., Qi, P. -F., Rahman, P., Rai, N. K., Rassaf, T., Refardt, J., Ricciardi, Walter, Riess, O., Rovas, A., Sacks, F. M., Saleh, S., Sampson, C., Schmutz, A., Sepanski, R., Sharma, N., Spearman, P., Subramaniapillai, M., Swali, R., Tan, C. M., Tellechea, J. I., Thomas, L. -M., Tong, X., Vavvas, D. G., Veys, R., Vitriol, V., Wang, H. -D., Waugh, J., Webb, S. A., Williams, B. A., Workman, A. D., Xiang, T., Xie, L. -X., Xu, T., Yang, C., Yoon, J. G., Yuan, C. M., Zaritsky, A., Zhao, H., Zuckerman, H., Lyu, R., Pullan, W., Calabro G. E. (ORCID:0000-0003-0259-3797), and Ricciardi W. (ORCID:0000-0002-5655-688X)
- Abstract
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science.
- Published
- 2019
26. Selected abstracts
- Author
-
Corkery, P. P., Leek, B. F., Caulfield, B., Garrett, M., Gormley, J. P., OʼDonnell, P. M., Kennedy, N., Sayers, K., Stokes, E., Bresnihan, B., Fitzgerald, O., McGarvey, M. A., Tonra, M., Hooper, A. C. B., Barry, J., Maurer, B., Hussey, J., Gormley, J., Noble, J. G., Alves-Guerreiro, J., Lowe, A. S., Walsh, D. M., NicNiocaill, B., Harte, M., OʼConnor, W. T., OʼHara, A. M., Orren, A., Moran, A. P., Hardiman, D. A., Lee, T. C., Croke, D. T., Tolan, R., McBennett, S., Warmington, S., McGuire, M., Bradford, A., OʼHare, T., MacDermott, M., Lynch, F., OʼRegan, R. G., McLoughlin, P., Quinn, T., Ryan, J. P., Pickering, M., Campion, D. P., Jones, J. F. X., Ryan, S., McNicholas, W. T., Nolan, P., Doyle, F. J., Rackard, S. M., Beddy, P., Campbell, V. A., Bakhle, Y. S., Bell, C., Usher, C., Chan, L., Keenan, A. K., McQuaid, K. E., Cullen, V. C., Smith, E. M., Kelly, A., Lynch, M. A., Freir, D. B., Holscher, C., Herron, C. E., Pearson, H. A., Curran, B. P., OʼConnor, J. J., Quinn, A., McHale, J., Moriarty, D., OʼConnor, J., Glennon, J. C., Van Vliet, B. J., Long, S. K., Kruse, C., Gallagher, H. C., Bacon, C. L., Boland, B., Griffin, A. M., Preisler, J., OʼBrien, L., Regan, C. M., Hurley, S., Kearney, P. J., Slevin, J., Barry-Kinsella, C., Ryan, C. A., Kllleen, O., Glllan, J., Clarke, T., Matthews, T., Corcoran, D., Dunn, E., Geary, M., OʼHerlihy, C., Keane, D., OʼLeary, M. J., Morrison, J. J., Ryan, E., Gorman, W. A., Bourke, A., Larkin, J., Mayes, C., Jenkins, J., Ryan, M., Lalchandani, S., Sheil, O., Lynch, N., Costigan, C., Murphy, J. F., Bhatia, R., Foran, A., Donohue, V., McParland, P., LaSjaunais, P., Rodesch, G., McGinn, M., McAloon, J., OʼLeary, M., Astbury, K., Harmon, D., Sharkey, A., Gaffney, G., OʼRegan, G., McMahon, C., Murray, D., McDermott, C., Woolhead, E., Gillan, J., Cartmill, J. L., Harper, M. A., Al-Shabibi, N., Hanahoe, M., Wingfield, M., Larkin, J. A. M., Bell, A. H., McClure, B. G., Sweeney, L., Martin, D. H., OʼDonoghue, P., Davoren, A., Lucas, G. F., McKiernan, J., Gallagher, D. M. T., Dunne, K. P., Fulena, O., Sheridan, M., Griffin, E., White, M., Deasy, P., OʼRiordan, M., OʼGorman, C., Mongan, C., McCafferkey, M., Henry, G., McKenna, P., OʼMalley, A., Devaney, D., Kelleghan, P., Mooney, E. E., Gillan, J. E., Fitzpatrick, M., McQuillan, K., Heffron, C., Hodnett, P., Curtain, A., OʼConnor, T. C. F., Connell, T. G., Waldron, D., Gorman, W., Bolger, T., OʼKeefe, M., Murphy, J., Dolan, L. M., Traub, A. I., Slattery, M. M., Curley, A. E., Halliday, H. L., Tubman, T. R. J., Kileen, O., Riadha, H., Russell, J., Philips, R., Regan, C., Ali, I., Coughlan, A. C. J., Turner, M. J., Smith, A., OʼFlanagan, D., Igoe, D., Ryan, F., Forde, D., McArdle, E., Ko, D., Bedford, D., Hegarty, M., Dunlevy, B., Corcoran, R., Holohan, T., Feeney, A., McGee, H., Shannon, W., Condon, M., Hyland, C., Sayers, G., Feely, E., Crowley, D., OʼReilly, D., OʼConnell, T., Cronin, M., Johnson, H., Fitzgeraldi, M., Cafferkey, M., Breslin, A., Bonner, C. J., Foley, B., Fitzgerald, M., Wall, P. G., McNamara, E., Costigan, P., Prendergast, T., Foye, K., Cosgrove, C., Keane, A., Murphy, E., OʼDonnell, J., Quinlan, A., Thornton, L., Roch, E. A., Lyons, R. A., Maddocks, A., Barnes, P., Price, L., McCabe, M., Nash, P., Midha, A., Doyle, Y., Kilgallen, A., Wright, P., Ryan, T., De La Harpe, D., Harkins, V., Brennan, C., OʼConnell, V., Evans, D. S., Mhuircheartaigh, Ni J., OʼDonnell, J. M., Rhatigan, A., Shelley, E., Collins, C., Byrne, M., Murphy, A. W., Plunkett, P. K., Murray, A., Bury, G., Lynam, F., McMahon, G., Greally, T., Kane, D., Veale, D., Reece, R., Busteed, S., Bennett, M. W., Stone, M., Molloy, C., OʼConnell, J., Molloy, M. G., Shanahan, F., Guerin, J., Casey, E., Feighery, C., Lin, F., Jackson, J., Pendleton, A., Wright, G. D., Hughes, A. E., OʼGradaigh, D., Debham, I., Compston, J., McEvoy, A., Murphy, E. P., Salonen, D., Payne, P., Lax, M., Lapp, V., Inman, R., OʼRourke, K., Brennan, D., Harty, J., McCarthy, C., OʼByrne, J., Eustace, S., Chirayath, H., Liggett, N. W., Morgan, M. P., Fitzgerald, D. J., McCarthy, C. J., McCarthy, G. M., Lee, R. Z., Wai, K., Nevin, D., Leary, A. O., Lee, R., Casey, E. B., OʼLeary, A., Breen, D., Tuite, D., McInerney, D., Sim, R., Frederic, A. L., Smith, O., White, B., Murphy, M., Silke, C., OʼKeeffe, E., Fanning, N., Spence, L., Parfrey, N. A., McConnell, J. R., Crockard, A. D., Cairns, A. P., Bell, A. L., Kavanagh, O., Moyes, D. A., Finch, M., Rooney, M., Bell, A., Founas, I., El-Magbri, A., Mooney, S., Kennedy, M., Coughlan, R. J., Ramakrishnan, S. A., Gsel, A., Finnerty, O., Burns, M., Yateman, M., Camaco-Hubner, C., Matthews, C. F., Taggart, A., Fuller, K., Murphy, M. S., Phelan, M., Murphy, T. B., Wynne, F., Quane, K., Daly, M., OʼLeary, J., da Silva, I., Bermingham, N., Gogarty, M., Gallagher, L. P., OʼHara, R., Godson, C., Brady, H., Osman, H., El-Rafie, A., Foley-Nolan, D., Kirwan, P., Corcoran, O., Duffy, T., Drummond, F., Madigan, A., Williams, D., Gallagher, P., Hatton, C., Cunningham, S., FitzGerald, O., Minnock, P., Wylie, E., Egan, D., Mc Cormack, J., Shea, M. O., Evans, D., OʼLorcain, P., Comber, H., Evans, A., Jones, J., Garavan, C., Kelleher, K., Boland, M. C., Healy, R., OʼSullivan, M. B., Burke, M., Mc Donald, P., Smithson, R., Glass, J., Mason, C. A., Mullins, N., Nolan, D., McCormick, P., Coughlan, S., Dooley, S., Kelleher, C. C., Hope, A., Murphy, F., Barry, M., Sixsmith, J., MacFarlane, A., MacLeod, C., McElroy, G., OʼLoan, D., Kennedy, F., Kerr, R. M., Lim, J., Allwright, S. P. A., Bradley, F. L., Barry, J. M. G., Long, J., Parry, J. V., Creagh, D., Perry, I. J., Collins, A., Neilson, S., Colwell, N., OʼHalloran, D., OʼNeill, S., McErlain, S., Okasha, M., Gaffney, B., McCarron, P., Hinchion, R., Drew, C., Gavin, A., Fitzpatrick, D., Campbell, R., Wannamethee, S. G., Shaper, A., Friel, S., Kelleher, C., Kee, F., Atterson, C. C., Wilson, E. A., McConnell, J. M., Wheeler, S. M., Watson, J. D., Rahman, Norashikin N., Sheehan, J., Wall, C., Kelleher, B., OʼBroin, S. D., Mullan, R. N., McKeveney, P. J., Hodges, V. M., Winter, P. C., Maxwell, P., Simpson, D. A., Lappin, T. R. J., Maxwell, A. P., Eustace, J. A., Coresh, J., Kutchey, C., Te, P. L., Gimenez, L. F., Scheel, P. J., Walser, M., McMahon, R. A., Clarkson, M., Martin, F., Brady, H. R., Blake, C., OʼMeara, Y. M., Gupta, S., MacKenzie, H., Doyle, S., Fotheringham, T., Haslam, P., Logan, M. P., Conlon, P., Lee, M., Maderna, P., Cottell, D. C., Mitchell, S., Gulmann, C., Østerby, R., Bangstad, H. J., Rljdberg, S., Dempsey, M., Nathwani, S., Ryan, M. P., McMahon, B., Stenson, C., Murtagh, H., Brown, J. H., Doran, P., McGinty, A., Little, M. A., OʼBrien, E., Owens, P., Holian, J., Mee, F., Walshe, J. J., Omer, S. A., Power, D., Diamond, P., Watson, R. W., Shahsafei, A., Jiang, T., Brenner, B. M., Mackenzie, H. S., Neary, J., Dorman, A., Keoghan, M., Campbell, E., Walshe, J., Little, M., Nee, L., OʼCeallaigh, C., McGlynn, H., Bergin, E., Keane, T., Gormley, G., Watson, A., Atta, M. G., Perl, T. M., Song, X., Healy, E., Leonard, M., Lynch, J., Watson, A. J., Lappin, D., Lappin, D. W. P., Hannan, K., Burne, M., Daniels, F., Rabb, H., McBride, B., Kieran, N., Shortt, C., Codd, M., Murray, F., McCormack, A., Brown, C., Wong, C., Dorman, A. M., Keogan, M., Donohue, J., Farrell, J., Donohoe, J., OʼBroin, S., Balfe, A., Mellotte, G. J., Abraham, K. A., McGorrian, C., Wood, A. E., Neligan, M., Kelly, B. D., Finnegan, P., Cormican, M., Callaghan, J., Crean, J. K. G., Moffitt, T. A., Devlin, H. L., Garrett, P. J., Soosay, A., OʼNeill, D., Counihan, A., Hickey, D., Keogan, M. T., Harvey, K., OʼRiordan, E., Waldek, S., Kalra, P. A., OʼDonoghue, D. J., Foley, R. N., Kelliher, D., Mellotte, G., Giblin, L., Keogh, J. A. B., OʼConnell, M., OʼMeara, A., Breatnach, F., Gillick, J., Tazawa, H., Puri, P., Molloy, E., OʼNeill, A. J., Sheridan-Pereira, M., Fitzpatrick, J. M., Webb, D. W., Watson, R. W. G., Linnane, B., OʼDonnell, C., Clarke, T. A., Martin, C., McKay, M., McBrien, J., Glynn, F., OʼDonovan, C., Hall, W. W., Smith, J., Khair, K., Liesner, R., Hann, I. M., Smith, O. P., Gallagher, S., Mahony, M. J., Hilal, A., Cosgrove, J. F., Monaghan, C., Craig, B., Walsh, K., Duff, D., Slizlok, P. O., Halahakoon, C., McMillan, S., Dalzell, E. E., McCaughan, J., Redmond, A. O. B., DeCaluwe, D., Yoneda, A., Akl, U., Dempsey, E., Farrell, M., Webb, D., Elabbas, A., Fox, G., Gormally, S., Grant, B., Corkey, C. W. B., Nicholson, A., Murphy, A., OʼGrady, P., Barry, O., Stewart, M. C., Alderdice, F., Matthews, T. G., McDonnell, M., McGarvey, C., OʼRegan, M., Chróinín, Ní M., Tormey, P., Ennis, S., Green, A. J., Abbas, S., OʼMarcaigh, A., Conran, M., Crushell, E., Saidi, A., Curran, P., Donoghue, V., King, M. D., Elnazir, B., Leonard, J., Kavanagh, C., Brown, D., Corrigan, N., McCord, B., Quinn, M., OʼConnell, L., Mcdonagh, B., Awan, A., Gill, D., Kakkar, R., Warner, J. A., OʼConnor, C., Herzig, M., Twomey, A., White, M. J., Sweeney, B., Surana, R., Hodgson, A., Rafferty, M., Livingstone, W., Peake, D., Wassemer, E., Whitehouse, W., Abdullah, N., Al-Hassan, A., Oslizlok, P., OʼConnell, N., Balding, J., Livingstone, W. J., Healy, M., Mynett-Johnson, L., McAllister, I., Dick, A. C., Herron, B., Boston, V. E., Callaghan, C. O., Brien, D. O., Walsh, A., Philip, M., McShane, D., Hoey, M. C. V., Sharif, F., McDermott, M., Dillon, M., Drumm, B., Rowland, M., Imrie, C., Kelleher, S., Bourke, B., Iqbal, M., Ziedan, Y., OʼNeill, M., OʼRiordan, S., Basheer, S. M. B., OʼCallaghan, S., Chong, A., Kelly, M., Nicholson, A. J., Cooke, R., Sreenan, C., Fallon, M., Denham, B., Dowding, V., Cussen, G., McManus, V., Hensey, O., Monaghan, H., Basheer, S. N., Quinn, E., Hoey, H. M. C. V., Mohamed, S., Ramesh, R. R., Mayne, P., Tracy, E., Gormally, S. M., Curtis, E., McCallion, N., Watson, R., OʼMahony, O., Keegan, M., Ward, K., Barton, D., Poulton, J., Treacy, E., Honour, J., deCaluwe, D., Chróinín, Ni M., Cosgrove, J., Chaudhry, T. S., Long, N. M., Lynch, B., Lasjaunais, P., McDonald, D. G. M., McMenamin, J. B., Farrell, M. J., Roche, E. F., Menon, A., Buckley, C., Mackey, A., Ohlandieck, K., Das, A., Reilly, D., Killeen, O., Harper, J., Roche, E., Hoey, H., Caird, J., OʼBrien, D., Allcutt, D., Farrington, N., Murphy, J. F. A., Savage, J. M., Sands, A. J., Casey, F. A., Craig, B. G., Dornan, J. C., Johnston, J., Patterson, C., Lynch, C., Mulholland, H. C., Watkins, D. C., Young, I., Cran, G., Boreham, C. A. G., McCallion, W. A., Clements, N. F., Stevenson, M. R., Macpherson, C., Jenkins, L., Thompson, A. J., Shields, M. D., Taylor, R. T., Kerr, R., Hughes, J. L., Stewart, M., Jackson, P., Fitzpatrick, C., Rasheed, M., Colhoun, E., Bailie, A. G., Gray, S., Brown, S., Curley, A., Sweet, D. G., MacMahon, K. J., OʼConnor, C. M., Nichelson, A., Lynch, N. E., Finch, D., Foley, M., Scallan, E., Dillon, B., Lyons, S., OʼLoughlin, R., Ward, M., Nally, R., Harkin, A., Kelly, J. P., Leonard, B. E., Magee, P., Connor, T. J., Shen, Y., McCullough, G. R., McDonough, S. M., Niocaill, Nic B., Cramp, A. F. L., Hynes, M., Corkery, P., Carey, M., McGarrigle, D., Higgins, S., Murray, H., Moran, C. J., Dennedy, M. C., Brosnan, J., Morris, L., Sheppard, B. L., Black, A., Wilkins, B., Folan-Curran, J., Skelton, K., Owens, M., Nemeroff, C., Houlihan, D., OʼKeeffe, C., Nolan, N., McCormick, P. A., Baird, A. W., Raducan, I., Corcoran, P., Brennan, R., Molloy, P., Friel, A., Maher, M., Glennon, M., Smith, T., Nolan, A., Houghton, J. A., Carroll, O., Colleran, S., OʼCuinn, G., Snow, H. M., OʼRegan, D., Markos, H. F., Pollock, K., Cannon, D. M., McBean, G., OʼRiordan, A., Quinlan, L. R., Kane, M. T., Higglns, B. D., Moriarty, D. M., Fitzgerald, D., Katkada, A., Canny, G., MacMathuna, P., OʼDonoghue, D., OʼDonovan, M. M., Schuur, A. G., Murphy, K. J., Foley, A. G., ten Bruggencate, S. J. M., and Ireland, L.
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- 2000
- Full Text
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27. P235 Using virtual reality to enhance the transition process
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Vagg, T., primary, Morrissy, D., additional, Shortt, C., additional, Fleming, C., additional, Daly, M., additional, Tabirca, S., additional, and Plant, B.J., additional
- Published
- 2019
- Full Text
- View/download PDF
28. P264 Real-world Orkambi cohort CorK study (ROCK) - a prospective twelve months' analysis addressing the effectiveness of CFTR modulation in patients with cystic fibrosis homozygous for F508del CFTR
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Arooj, P., primary, Morrissy, D., additional, Ronan, N., additional, McCarthy, Y., additional, Daly, M., additional, Flanagan, E., additional, Shortt, C., additional, McCarthy, M., additional, Flemming, C., additional, Eustace, J., additional, Murphy, D., additional, and Plant, B., additional
- Published
- 2019
- Full Text
- View/download PDF
29. Irish thoracic society
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Coakley, R., OʼNeill, S., Glynn, P., Finlay, G. A., Russell, K. J., McMahon, K., DʼArcy, E. M., Masterson, J. B., Fitzgerald, M. X., OʼConnor, C. M., OʼDriscoll, L. R., McGarvey, L. P. A., Heaney, L. G., MacMahon, J., Leonard, C., Tormey, V., Burke, C. M., Poulter, L. W., Keatings, V. M., Barnes, P. J., Harty, H. R., Corfield, D. R., Adams, L., Schwartzstein, R. M., Kiely, J. F., Buckley, A., Shiels, P., Deegan, P. C., Maurer, B., McNicholas, W. T., Dunlop, K. A., Martin, B., Riley, M., Shields, M. D., Kilgallen, I., McElvaney, N. G., Cervantes-Laurean, D., Wehr, N., Gabriele, K., Robinson, W., Moss, J., Levine, R. L., Urbach, V., Walsh, D., Harvey, B., McElroy, M. C., Pittet, J F., Allen, L., Wiener-Kroonish, J., Dobbs, L. G., OʼDonnell, D. M., McMahon, K. J., OʼConnor, C., McGuirk, P., Mahon, B., Griffin, F., Mills, K. H. G., Murphy, R., Brijker, F., Mulloy, E., Cohen Tervaert, J. W., Walshe, J., Lowry, R. C., Shepherd, D. R. T., Gamble, L. A., Carton, C., Memon, R., Winter, D., Chan, A., Aherne, T., OʼReilly, P., Harbison, J. A., OʼCallaghan, S., Keane, M., McKenna, M., Woods, S., Lamon, A., Faul, J., Murphy, M., Porszasz, J., Engelen, M. P. K. J., Brundage, B., Wasserman, K., Sweeney, M., OʼRegan, R. G., McLoughlin, P., Honner, V., Sinnott, B., McGrath, D. S., Kiely, J., Cryan, B., Bredin, C. P., Shortt, C., Stack, M., Kelleher, N., McRedmond, J., Mulkerji, N., Keatings, V., Boylan, G. M., Forsythe, P., Cross, L. J. M., Ennis, M., Davern, S., McDonnell, T. J., Kiely, J. L., Lawless, G., Cunningham, S., Lordan, J., Clancy, L., Manning, P., Plunkett, P., Donaghy, D., Musbah, Ben F., Loftus, B. G., Rutherford, R., Watson, S. N. E., Gilmartin, J. J., Henry, M., Mullins, G., and Brennan, N.
- Published
- 1998
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30. The Patient's Second Hip Fracture - One in Ten.
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Downey, C., Flannery, S., Wahab, E. H. Abd, Askin, D., O'Kelly, P., Shortt, C. P., O'Daly, B. J., and Quinlan, J. F.
- Published
- 2020
31. P026 Real-world Orkambi Cohort Cork study (ROCKS) - a prospective three months’ analysis addressing the impact of CFTR modulation in patients with cystic fibrosis homozygous for ΔF508del CFTR
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Arooj, P., primary, Ronan, N., additional, Mccarthy, Y., additional, Daly, M., additional, Flanagan, E., additional, Shortt, C., additional, Mccarthy, M., additional, Flemming, C., additional, Eustace, J.A., additional, Murphy, D., additional, and Plant, B.J., additional
- Published
- 2018
- Full Text
- View/download PDF
32. P058: Paramedic recognition and management of anaphylaxis in the prehospital setting
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Welsford, M., primary, Gupta, R., additional, Samoraj, K., additional, Sandhanwalia, S., additional, Kerslake, M., additional, Ryan, L., additional, and Shortt, C., additional
- Published
- 2018
- Full Text
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33. A Case Of Generalized Vaccinia
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de Vere Shortt, C. J.
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- 1933
34. Correspondence
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Smith, G. Foster, Greene, Raymond, Graham-Little, E., Brown, Henry, Locum, War, and de Vere Shortt, C. J.
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- 1943
35. State Control
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St. J. de Vere Shortt, C.
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- 1948
36. Powers And Procedure Of G.M.C.
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De Vere-Shortt, C. J. and Hypher, N. C.
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- 1946
37. Legal And Medical Insanity
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de Vere Shortt, C. J.
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- 1946
38. Chapter Designing Heterogeneous-mHealth Apps for Cystic Fibrosis Adults
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Vagg, Tamara, Fleming, C., Shortt, C., McCarthy, Mairead, Plant, Barry J., and Tabirca, Sabin
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cystic fibrosis, patient passport, mHealth, digital health, self-management ,bic Book Industry Communication::M Medicine::MJ Clinical & internal medicine::MJL Respiratory medicine - Abstract
In this chapter, we will discuss the design and development of a patient passport mHealth application for Cystic Fibrosis adults from ideation to app-store release. By allowing the patients access to their own unique data, it is anticipated that it will be of benefit when travelling abroad and between CF centres. The design process followed a pipeline we developed that is informed by patient and healthcare professional input. The app structure resembles an Irish patient file and is divided into three categories: “My CF Info”, “My Medical History”, and “My Clinical Appointments”. My CF Info allows the patient to store personal information such genotype, medical team contact information, physiotherapy, allergies, and medications. My Medical History allows the user to record information such as CF renal disease, CF diabetes, and the insertion/removal of a portacath/gastrostomy tube. My Clinical Appointments allows the user to record the type of appointment (annual assessment, clinic, other) and all information that would ordinarily be inserted into a patient file such as weight, height, spirometry and other comments. Weight and lung function are also displayed in a plot graph. The app has undergone pilot testing with five CF adults before being rolled out onto the Google Play Store.
- Published
- 2020
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39. A pilot study demonstrating the altered gut microbiota functionality in stable adults with Cystic Fibrosis
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Fouhy, F., primary, Ronan, N. J., additional, O’Sullivan, O., additional, McCarthy, Y., additional, Walsh, A. M., additional, Murphy, D. M., additional, Daly, M., additional, Flanagan, E. T., additional, Fleming, C., additional, McCarthy, M., additional, Shortt, C., additional, Eustace, J. A., additional, Shanahan, F., additional, Rea, M. C., additional, Ross, R. P., additional, Stanton, C., additional, and Plant, B. J., additional
- Published
- 2017
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40. 232 Lumacaftor/Ivacaftor is associated with a significant improvement in walk test and reduction in sweat chloride in a cohort of homozygous F508del CF patients with severe disease – a single centre experience
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Ronan, N.J., primary, McCarthy, Y., additional, James, K., additional, Arooj, P., additional, Hunt, E.B., additional, Shortt, C., additional, Fleming, C., additional, McCarthy, M., additional, Howlett, C., additional, Hickey, C., additional, Flanagan, E., additional, Daly, M., additional, Eustace, J.A., additional, Maher, M.M., additional, and Plant, B.J., additional
- Published
- 2017
- Full Text
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41. WS03.3 A longitudinal, multi-centre investigation into the gut microbiota of adult CF patients – the CFMATTERS perspective
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Fouhy, F., primary, Ronan, N.J., additional, McCarthy, Y., additional, Arooj, P., additional, Daly, M., additional, Flanagan, E.T., additional, Deane, J., additional, O'Sullivan, O., additional, Murphy, K., additional, Fleming, C., additional, McCarthy, M., additional, Shortt, C., additional, Eustace, J.A., additional, Shanahan, F., additional, Rea, M.C., additional, Ross, R.P., additional, Floto, R.A., additional, Harrison, M.J., additional, Haworth, C.S., additional, Dupont, L., additional, Stanton, C., additional, and Plant, B.J., additional
- Published
- 2017
- Full Text
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42. 157 Ivacaftor does not produce a significant change in anti-Pseudomonas aeruginosa antibodies
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Collins, A., primary, Ronan, N.J., additional, McCarthy, Y., additional, Daly, M., additional, Shortt, C., additional, McCarthy, M., additional, Fleming, C., additional, Howlett, C., additional, Hickey, C., additional, Murphy, D.M., additional, and Plant, B.J., additional
- Published
- 2017
- Full Text
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43. WS07.6 Investigating the gut microbiota of patients with cystic fibrosis (PWCF) and the effects of an altered gut microbiota on functionality and faecal metabolites – the CFMATTERS experience
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Fouhy, F., primary, Ronan, N.J., additional, O'Sullivan, O., additional, Deane, J., additional, McCarthy, Y., additional, Murphy, K., additional, Murphy, D.M., additional, Daly, M., additional, Flanagan, E.T., additional, O'Callaghan, G., additional, Fleming, C., additional, McCarthy, M., additional, Shortt, C., additional, Eustace, J.A., additional, Shanahan, F., additional, Rea, M.C., additional, Ross, R.P., additional, Stanton, C., additional, and Plant, B.J., additional
- Published
- 2016
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44. 217 Medical outcomes post transition of clinical care from a paediatric cystic fibrosis care model to an adult cystic fibrosis care model – an Irish perspective
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Thornton, K.P., primary, Ronan, N.J., additional, Shortt, C., additional, McCarthy, M., additional, Fleming, C., additional, Daly, M., additional, Hickey, C., additional, Howlett, C., additional, Flanagan, E.T., additional, Eustace, J.A., additional, Murphy, D.M., additional, and Plant, B.J., additional
- Published
- 2016
- Full Text
- View/download PDF
45. WS20.4 Clinical outcomes of Real-World Kalydeco (CORK) study – a prospective 12 month analysis addressing the impact of CFTR modulation on the cystic fibrosis lung
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Ronan, N.J., primary, O'Callaghan, G.P., additional, Mooney, D., additional, Einarsson, G., additional, Elborn, J.S., additional, Ni Chroinin, M., additional, Mullane, D., additional, Murphy, D.M., additional, O'Connor, O.J., additional, Shortt, C., additional, Tunney, M.M., additional, Twomey, M., additional, Maher, M.M., additional, Eustace, J.A., additional, and Plant, B.J., additional
- Published
- 2015
- Full Text
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46. 48 Altered gut microbiota in stable patients with cystic fibrosis (CF) compared to controls and its relationship with intravenous (IV) antibiotic usage and lung function
- Author
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Burke, D.G., primary, Fouhy, F., additional, Rea, M.C., additional, Harrison, M.J., additional, Stanton, C., additional, O'Sullivan, O., additional, Murphy, D.M., additional, O'Callaghan, G.P., additional, Eustace, J.A., additional, Shanahan, F., additional, Fleming, C., additional, McCarthy, M., additional, Shortt, C., additional, Ross, R.P., additional, and Plant, B.J., additional
- Published
- 2015
- Full Text
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47. 128 The metabolic consequences of CFTR modulation with ivacaftor in a single adult cystic fibrosis centre cohort
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Ronan, G., primary, Ronan, N.J., additional, Shortt, C., additional, Fleming, C., additional, Cronin, K., additional, McCarthy, M., additional, Hickey, C., additional, Murphy, D.M., additional, Eustace, J.A., additional, O'Halloran, D.J., additional, and Plant, B.J., additional
- Published
- 2015
- Full Text
- View/download PDF
48. PASSCLAIM--gut health and immunity
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Cummings, J. H., Antoine, J. -M, Fernando Azpiroz, Bourdet-Sicard, R., Brandtzaeg, P., Calder, P. C., Gibson, G. R., Guarner, F., Isolauri, E., Pannemans, D., Shortt, C., Tuijtelaars, S., Watzl, B., and DANONE, Admin
- Subjects
[SDV.OT] Life Sciences [q-bio]/Other [q-bio.OT] - Abstract
BACKGROUND: The gut and immune system form a complex integrated structure that has evolved to provide effective digestion and defence against ingested toxins and pathogenic bacteria. However, great variation exists in what is considered normal healthy gut and immune function. Thus, whilst it is possible to measure many aspects of digestion and immunity, it is more difficult to interpret the benefits to individuals of variation within what is considered to be a normal range. Nevertheless, it is important to set standards for optimal function for use both by the consumer, industry and those concerned with the public health. The digestive tract is most frequently the object of functional and health claims and a large market already exists for gut-functional foods worldwide. AIM: To define normal function of the gut and immune system and describe available methods of measuring it. RESULTS: We have defined normal bowel habit and transit time, identified their role as risk factors for disease and how they may be measured. Similarly, we have tried to define what is a healthy gut flora in terms of the dominant genera and their metabolism and listed the many, varied and novel methods for determining these parameters. It has proved less easy to provide boundaries for what constitutes optimal or improved gastric emptying, gut motility, nutrient and water absorption and the function of organs such as the liver, gallbladder and pancreas. The many tests of these functions are described. We have discussed gastrointestinal well being. Sensations arising from the gut can be both pleasant and unpleasant. However, the characteristics of well being are ill defined and merge imperceptibly from acceptable to unacceptable, a state that is subjective. Nevertheless, we feel this is an important area for future work and method development. The immune system is even more difficult to make quantitative judgements about. When it is defective, then clinical problems ensure, but this is an uncommon state. The innate and adaptive immune systems work synergistically together and comprise many cellular and humoral factors. The adaptive system is extremely sophisticated and between the two arms of immunity there is great redundancy, which provides robust defences. New aspects of immune function are discovered regularly. It is not clear whether immune function can be "improved". Measuring aspects of immune function is possible but there is no one test that will define either the status or functional capacity of the immune system. Human studies are often limited by the ability to sample only blood or secretions such as saliva but it should be remembered that only 2% of lymphocytes circulate at any given time, which limits interpretation of data.We recommend assessing the functional capacity of the immune system by: measuring specific cell functions ex vivo. measuring in vivo responses to challenge, e. g. change in antibody in blood or response to antigens. determining the incidence and severity of infection in target populations during naturally occurring episodes or in response to attenuated pathogens.
- Published
- 2004
49. Prebiotic Ingredients with Emphasis on Galacto-Oligosaccharides and Fructo-Oligosaccharides
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Angus, F., primary, Smart, S., additional, and Shortt, C., additional
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50. Immediate Direct Peripheral Vasoconstriction in Response to Hyperinsulinemia and Metformin in the Anesthetized Pig
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MARKOS, F., primary, SHORTT, C. M., additional, EDGE, D., additional, RUANE-O’HORA, T., additional, and NOBLE, M. I. M., additional
- Published
- 2014
- Full Text
- View/download PDF
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