102 results on '"Shio-Shin Jean"'
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2. Multicenter surveillance of antimicrobial susceptibilities and resistance mechanisms among Enterobacterales species and non-fermenting Gram-negative bacteria from different infection sources in Taiwan from 2016 to 2018
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Shio-Shin Jean, Yu-Lin Lee, Po-Yu Liu, Min-Chi Lu, Wen-Chien Ko, and Po-Ren Hsueh
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Enterobacterales ,Pseudomonas aeruginosa ,Burkholderia cenocepacia complex ,Multidrug-resistant ,Extensively-drug-resistant ,Ceftolozane/tazobactam ,Microbiology ,QR1-502 - Abstract
Objectives: To explore the in vitro antimicrobial susceptibility among clinically important Gram-negative bacteria (GNB) in Taiwan. Methods: From 2016 through 2018, a total of 5458 GNB isolates, including Escherichia coli (n = 1545), Klebsiella pneumoniae (n = 1255), Enterobacter species (n = 259), Pseudomonas aeruginosa (n = 1127), Acinetobacter baumannii complex (n = 368), and Stenotrophomonas maltophilia (n = 179), were collected. The susceptibility results were summarized by the breakpoints of minimum inhibitory concentration (MIC) of CLSI 2020, EUCAST 2020 (for colistin), or published articles (for ceftolozane/tazobactam). The resistance genes among multidrug-resistant (MDR) or extensively drug-resistant (XDR)-GNB were investigated by multiplex PCR. Results: Significantly higher rates of non-susceptibility (NS) to ertapenem and carbapenemase production, predominantly KPC and OXA-48-like beta-lactamase, were observed in Enterobacterales isolates causing respiratory tract infection than those causing complicated urinary tract or intra-abdominal infection (12.7%/3.44% vs. 5.7%/0.76% or 7.7%/0.97%, respectively). Isolates of Enterobacter species showed higher rates of phenotypic extended-spectrum β-lactamase and NS to ertapenem than E. coli or K. pneumoniae isolates. Although moderate activity (54–83%) was observed against most potential AmpC-producing Enterobacterales isolates, ceftolozane/tazobactam exhibited poor in vitro (44.7–47.4%) activity against phenotypic AmpC Enterobacter cloacae isolates. Additionally, 251 (22.3%) P. aeruginosa isolates exhibited the carbapenem-NS phenotype, and their MDR and XDR rate was 63.3% and 33.5%, respectively. Fifteen (75%) of twenty Burkholderia cenocepacia complex isolates were inhibited by ceftolozane/tazobactam at MICs of ≤4 μg/mL. Conclusions: With the increase in antibiotic resistance in Taiwan, it is imperative to periodically monitor the susceptibility profiles of clinically important GNB.
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- 2022
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3. Use of Multiple Doses of Intravenous Infusion of Umbilical Cord-Mesenchymal Stem Cells for the Treatment of Adult Patients with Severe COVID-19-Related Acute Respiratory Distress Syndrome: Literature Review
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Po-Ren Hsueh, Sung-Jung Ho, Po-Chuen Hsieh, I-Min Liu, and Shio-Shin Jean
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Internal medicine ,RC31-1245 - Abstract
Objectives. Acute respiratory distress syndrome (ARDS) is a critical complication in severe COVID-19 patients. The intravenous infusion (IVF) of umbilical cord- (UC-) mesenchymal stem cells (MSCs), validated to substantially reduce the release of several inflammatory cytokines in vivo, was also shown to exhibit benefits in improving hypoxemia among severe COVID-19 patients. A single dose of IVF-UC-MSCs therapy for severe COVID-19 patients was shown to alleviate the initial ARDS severity, but have 50%–67% case-fatality rates. In Taiwan, few adult patients with severe COVID-19-induced ARDS receiving compassionate adjuvant treatment consisting of either a single dose (1–10 × 106 cells/kg body weight (kg BW)) or three doses (5 × 106 cells/kg BW in each dose) of IVF-UC-MSCs had good outcomes. However, the optimal dosage and rounds of IVF-UC-MSCs administration for the treatment of severe COVID-19 patients with ARDS are undetermined. Methods. We reviewed the 2020–2022 PubMed literature database concerning the clinical efficacy of IVF-UC-MSCs among severe COVID-19 patients. Results. The data of COVID-19 case series in the PubMed literature revealed a notable heterogeneity in the therapeutic dosage (a single dose: 1–10 × 106 cells/kg BW; and three doses: 50–200 × 106 cells/kg BW in each dose) and the post-ARDS days of IVF-UC-MSCs administration (a single dose: 1–12; and multiple doses: 5–14) for the treatment of severe COVID-19-associated ARDS. The survival rates among these severe COVID-19 patients ranged from 50% to 76%. However, an overall rate of 93.1% of significant improvement in hypoxemia was observed for the COVID-19 survivors receiving IVF-UC-MSCs at the initial ARDS stage. Conclusions. According to our analysis, the ideal treatment dosage of IVF-UC-MSCs for severe COVID-19-induced ARDS is likely 5 × 106 cells/kg BW for three cycles within 5 days of ARDS onset in severe COVID-19 patients.
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- 2023
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4. In Vitro Susceptibilities of Worldwide Isolates of Intrapulmonary Aspergillus Species and Important Candida Species in Sterile Body Sites against Important Antifungals: Data from the Antimicrobial Testing Leadership and Surveillance Program, 2017–2020
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Shio-Shin Jean, Hung-Jen Yang, Po-Chuen Hsieh, Yu-Tsung Huang, Wen-Chien Ko, and Po-Ren Hsueh
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intrapulmonary Aspergillus species ,Candida species ,sterile body sites ,isavuconazole ,amphotericin B ,anidulafungin ,Microbiology ,QR1-502 - Abstract
ABSTRACT To understand the changes of resistance in clinically commonly encountered fungi, we used the Antimicrobial Testing Leadership and Surveillance (ATLAS) database to explore in vitro antifungal susceptibilities against clinically important isolates of Aspergillus and Candida species (collected from intrapulmonary and sterile body areas, respectively). We applied the CLSI antifungal 2020 and the EUCAST antifungal 2020 guidelines. From 2017 to 2020, isolates of intrapulmonary Aspergillus fumigatus (n = 660), Aspergillus niger (n = 107), Aspergillus flavus (n = 96), Aspergillus terreus (n = 40), and Aspergillus nidulans species complex (n = 26) and sterile site-originated isolates of Candida albicans (n = 1,810), Candida glabrata (n = 894), Candida krusei (n = 120), Candida dubliniensis (n = 107), Candida lusitaniae (n = 82), Candida guilliermondii (n = 28), and Candida auris (n = 7) were enrolled in this study. Using the EUCAST 2020 breakpoints, it was demonstrated that amphotericin B and posaconazole displayed poor in vitro susceptibility rates against A. fumigatus isolates (92%). Most intrapulmonary Aspergillus isolates exhibited MICs of ≤0.06 μg/mL to anidulafungin. Furthermore, intrapulmonary A. fumigatus isolates collected from Italy and the United Kingdom exhibited lower in vitro susceptibility to isavuconazole (72.2% and 69%, respectively) than those in the remaining ATLAS participant countries (>85%). Higher isavuconazole MIC90s against C. auris and C. guilliermondii (1 and 4 μg/mL, respectively) were observed compared to the other five Candida species. Despite the aforementioned MICs and susceptibilities against fungi, research needs to consider the pharmacokinetic (PK) profiles, pharmacodynamic (PD) parameters, and clinical treatment experience with antifungals against specific Aspergillus species. IMPORTANCE In addition to monitoring the antifungal susceptibilities of clinically important fungi, reviewing the PK/PD indices and the clinical therapy experience of antifungals under evaluation are important to guide an appropriate antifungal prescription. The efficacies of liposomal amphotericin B complex and anidulafungin for the treatment of pulmonary aspergillosis caused by different Aspergillus species need to be periodically evaluated in the future.
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- 2022
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5. In vitro susceptibility of ceftaroline against clinically important Gram-positive cocci, Haemophilus species and Klebsiella pneumoniae in Taiwan: Results from the Antimicrobial Testing Leadership and Surveillance (ATLAS) in 2012–2018
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Shio-Shin Jean, Wen-Sen Lee, Wen-Chien Ko, and Po-Ren Hsueh
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Ceftaroline ,Susceptibility ,Methicillin-resistant Staphylococcus aureus ,Streptococcus pneumoniae ,Staphylococcus epidermidis ,Klebsiella pneumoniae ,Microbiology ,QR1-502 - Abstract
Background/Purpose: Ceftaroline, with a unique activity against methicillin-resistant Staphylococcus aureus (MRSA), was not launched in Taiwan before 2019. The in vitro susceptibility data of ceftaroline against important Taiwanese pathogens are lacking. Methods: The in vitro susceptibility of ceftaroline against important pathogens collected from 2012 through 2018 were extracted from the Antimicrobial Testing Leadership and Surveillance program. Broth microdilution method was used to determine the minimum inhibitory concentrations (MICs) to ceftaroline against all isolates. Results: During the study period, the in vitro data regarding isolates of S. aureus (n = 2049), Staphylococcus epidermidis (n = 185), Streptococcus pneumoniae (n = 334), Streptococcus pyogenes (n = 170), Haemophilus influenzae (n = 75), Haemophilus parainfluenzae (n = 10) and Klebsiella pneumoniae (n = 680) regardless of hospital sites of collection were analyzed. Among the S. aureus isolates studied, 19.4% showed MICs of 1 mg/L to ceftaroline, and 4.4% showed in vitro susceptible-dose dependent to ceftaroline (all MICs, 2 mg/L). Most of other Gram-positive cocci, all H. influenzae and H. parainfluenzae isolates were susceptible to ceftaroline. By contrast, about one-third (35.9%) of K. pneumoniae isolates, irrespective of infection sources, exhibited non-susceptibility to ceftaroline (MIC range, 0.015–256 mg/L; MIC50 and MIC90 values, 0.12 and 256 mg/L, respectively). Conclusions: From the pharmacodynamic perspectives, the ceftaroline dosage of 600 mg as a 2-h intravenous infusion every 8 h is effective against all S. aureus and other Gram-positive isolates regardless of acquisition sites in Taiwan. Before ceftaroline is prescribed in treatment of the patient with Gram-negative infection, a cautious evaluation about patient's healthcare-associated factor is warranted.
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- 2021
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6. Tentative clinical breakpoints and epidemiological cut-off values of nemonoxacin for Streptococcus pneumoniae and Staphylococcus aureus isolates associated with community-acquired pneumonia
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Shio-Shin Jean, Li-Wen Chang, and Po-Ren Hsueh
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Nemonoxacin ,Epidemiological cut-off value ,Clinical breakpoint ,Community-acquired pneumonia ,Staphylococcus aureus ,Streptococcus pneumoniae ,Microbiology ,QR1-502 - Abstract
Objectives: To determine the minimum inhibitory concentration (MIC) distribution, epidemiological cut-off (ECOFF) values and clinical breakpoints (CBPs) of nemonoxacin, a non-fluorinated quinolone, for community-acquired pneumonia (CAP)-related Streptococcus pneumoniae and Staphylococcus aureus. Methods: We pooled the susceptibility and clinical data of CAP patients enrolled in five clinical trials conducted in three countries from 2006 to 2017. Published pharmacokinetic (PK) profiles of oral (500 mg) and intravenous (IV) (500, 650 and 750 mg) nemonoxacin formulations and pharmacodynamic (PD) parameters of the two aforementioned CAP-related Gram-positive cocci (GPC) were used to determine plausible CBPs. Moreover, nemonoxacin MIC distributions of CAP-relatedS. pneumoniae (n = 1800) and S. aureus (n = 2000) isolates were obtained to evaluate ECOFF values using a visual estimation approach and ECOFFinder. Results: More than 92% of patients with CAP caused byS. pneumoniae or S. aureus with nemonoxacin MICs ≤ 0.25 mg/L presented positive clinical and microbiological outcomes. The ECOFF, MIC90 and MIC99 values of nemonoxacin were, respectively, 0.06, 0.125 and 1 mg/L for S. pneumoniae and 0.125, 1 and 8 mg/L for S. aureus. Based on differences in the PK profiles of oral and IV formulations, PD parameters of nemonoxacin for these CAP-GPC and clinical in vivo efficacy data, tentative CBPs of 0.5, 0.5 and 1 mg/L, respectively, were established for the 500 mg oral and 500 mg and 750 mg IV nemonoxacin formulations for S. pneumoniae, and 0.25, 0.5 and 1 mg/L for S. aureus. Conclusion: This study provides plausible nemonoxacin CBPs for two important CAP-GPC.
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- 2020
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7. Global Threat of Carbapenem-Resistant Gram-Negative Bacteria
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Shio-Shin Jean, Dorji Harnod, and Po-Ren Hsueh
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carbapenem-resistant ,extensively-drug resistant ,gram-negative bacteria ,ceftazidime-avibactam ,enterobacterales ,Pseudomonas aeruginosa ,Microbiology ,QR1-502 - Abstract
Infections caused by multidrug-resistant (MDR) and extensively drug-resistant (XDR) Gram-negative bacteria (GNB), including carbapenem-resistant (CR) Enterobacterales (CRE; harboring mainly blaKPC, blaNDM, and blaOXA-48-like genes), CR- or MDR/XDR-Pseudomonas aeruginosa (production of VIM, IMP, or NDM carbapenemases combined with porin alteration), and Acinetobacter baumannii complex (producing mainly OXA-23, OXA-58-like carbapenemases), have gradually worsened and become a major challenge to public health because of limited antibiotic choice and high case-fatality rates. Diverse MDR/XDR-GNB isolates have been predominantly cultured from inpatients and hospital equipment/settings, but CRE has also been identified in community settings and long-term care facilities. Several CRE outbreaks cost hospitals and healthcare institutions huge economic burdens for disinfection and containment of their disseminations. Parenteral polymyxin B/E has been observed to have a poor pharmacokinetic profile for the treatment of CR- and XDR-GNB. It has been determined that tigecycline is suitable for the treatment of bloodstream infections owing to GNB, with a minimum inhibitory concentration of ≤ 0.5 mg/L. Ceftazidime-avibactam is a last-resort antibiotic against GNB of Ambler class A/C/D enzyme-producers and a majority of CR-P. aeruginosa isolates. Furthermore, ceftolozane-tazobactam is shown to exhibit excellent in vitro activity against CR- and XDR-P. aeruginosa isolates. Several pharmaceuticals have devoted to exploring novel antibiotics to combat these troublesome XDR-GNBs. Nevertheless, only few antibiotics are shown to be effective in vitro against CR/XDR-A. baumannii complex isolates. In this era of antibiotic pipelines, strict implementation of antibiotic stewardship is as important as in-time isolation cohorts in limiting the spread of CR/XDR-GNB and alleviating the worsening trends of resistance.
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- 2022
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8. Lemierre's syndrome: A forgotten and re-emerging infection
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Wen-Sen Lee, Shio-Shin Jean, Fu-Lun Chen, Szu-Min Hsieh, and Po-Ren Hsueh
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Lemierre's syndrome ,Septic emboli ,Bacteremia ,Thrombophlebitis ,Microbiology ,QR1-502 - Abstract
Lemierre's syndrome, also known as post-anginal septicemia or necrobacillosis, is characterized by bacteremia, internal jugular vein thrombophlebitis, and metastatic septic emboli secondary to acute pharyngeal infections. Modern physicians have “forgotten” this disease. The most common causative agent of Lemierre's syndrome is Fusobacterium necrophorum, followed by Fusobacterium nucleatum and anaerobic bacteria such as streptococci, staphylococci, and Klebsiella pneumoniae. The causative focus mostly originated from pharyngitis or tonsillitis, accounting for over 85% of the cases of Lemierre's syndrome. Pneumonia or pleural empyema is the most common metastatic infection in Lemierre's syndrome. Antimicrobial therapy should be prescribed for 3–6 weeks. The treatment regimens include metronidazole and β-lactam antibiotics. In recent years, the antibiotic stewardship program has resulted in decreased antibiotic prescription for upper respiratory tract infections. The incidence of Lemierre's syndrome has increased over the past decade. F. necrophorum is an underestimated cause of acute pharyngitis or tonsillitis. A high index of suspicion is required for the differential diagnosis of acute tonsillopharyngitis with persistent neck pain and septic syndrome.
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- 2020
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9. Antimicrobial susceptibilities of the ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales isolates causing intra-abdominal infections in the Asia-Pacific region during 2008–2014: Results from the Study for Monitoring the Antimicrobial Resistance Trends (SMART)
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Shio-Shin Jean and Po-Ren Hsueh
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Ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales ,Intra-abdominal infection ,Imipenem ,Cefepime ,Ciprofloxacin ,Microbiology ,QR1-502 - Abstract
Objectives: To investigate the susceptibility profiles amongst ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales (ETP-NS-non-CPE) isolates. Methods: Minimum inhibitory concentrations (MICs) of 404 ETP-NS-non-CPE isolates collected from different intra-abdominal infection (IAI) sites amongst patients in the Asia-Pacific region during 2008–2014 were determined using the broth microdilution method. The susceptibility results were interpreted according to the MIC breakpoints recommended by the Clinical and Laboratory Standards Institute (CLSI) in 2018. The MICs data of several agents were evaluated based on their published pharmacokinetic/pharmacodynamic (PK/PD) profiles. Results: The majority (>84%) of IAI-ETP-NS-non-CPE isolates – including Escherichia coli (n = 83), Klebsiella pneumoniae (n = 91) and Enterobacter species (n = 210) – were susceptible to imipenem and amikacin. The 193 hepatobiliary ETP-NS-non-CPE isolates exhibited a trend of lower cefepime MIC (≤4 mg/L) distribution than those (n = 145) cultured from the peritoneal space (P = 0.058). Amongst the ETP-NS-non-CP Enterobacter isolates, 65.7% displayed a cefepime MIC ≤ 4 mg/L. In addition, compared with Escherichia coli and Klebsiella pneumoniae isolates, 82.9% and 72.9% of the ETP-NS-non-CP Enterobacter isolates were susceptible to levofloxacin and ciprofloxacin, respectively. Of note, 74.5% and 70.3% of the ETP-NS-non-CP Enterobacter isolates cultured from the hepatobiliary tract and peritoneal space exhibited a ciprofloxacin MIC ≤ 2 mg/L and ≤0.25 mg/L, respectively. Imipenem and amikacin showed good in vitro susceptibility rates against the IAI-ETP-NS-non-CPE isolates. The hepatobiliary ETP-NS-non-CPE displayed lower cefepime MICs than those cultured from the peritoneal space. Additionally, a significant fraction of IAI-ETP-NS-non-CP Enterobacter isolates exhibited ciprofloxacin MIC ≤ 2 mg/L. Conclusion: Based upon the PK/PD analyses, ciprofloxacin, imipenem and cefepime are probably effective against IAI-ETP-NS-non-CPE isolates.
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- 2020
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10. Treatment options for COVID-19: The reality and challenges
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Shio-Shin Jean, Ping-Ing Lee, and Po-Ren Hsueh
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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Coronavirus disease 2019 (COVID-19) ,Remdesivir ,Hydroxychloroquine ,Non-steroidal anti-inflammatory drugs ,Angiotensin converting enzyme inhibitors ,Microbiology ,QR1-502 - Abstract
An outbreak related to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was first reported in Wuhan, China in December 2019. An extremely high potential for dissemination resulted in the global coronavirus disease 2019 (COVID-19) pandemic in 2020. Despite the worsening trends of COVID-19, no drugs are validated to have significant efficacy in clinical treatment of COVID-19 patients in large-scale studies. Remdesivir is considered the most promising antiviral agent; it works by inhibiting the activity of RNA-dependent RNA polymerase (RdRp). A large-scale study investigating the clinical efficacy of remdesivir (200 mg on day 1, followed by 100 mg once daily) is on-going. The other excellent anti-influenza RdRp inhibitor favipiravir is also being clinically evaluated for its efficacy in COVID-19 patients. The protease inhibitor lopinavir/ritonavir (LPV/RTV) alone is not shown to provide better antiviral efficacy than standard care. However, the regimen of LPV/RTV plus ribavirin was shown to be effective against SARS-CoV in vitro. Another promising alternative is hydroxychloroquine (200 mg thrice daily) plus azithromycin (500 mg on day 1, followed by 250 mg once daily on day 2–5), which showed excellent clinical efficacy on Chinese COVID-19 patients and anti-SARS-CoV-2 potency in vitro. The roles of teicoplanin (which inhibits the viral genome exposure in cytoplasm) and monoclonal and polyclonal antibodies in the treatment of SARS-CoV-2 are under investigation. Avoiding the prescription of non-steroidal anti-inflammatory drugs, angiotensin converting enzyme inhibitors, or angiotensin II type I receptor blockers is advised for COVID-19 patients.
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- 2020
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11. Lemierre syndrome complicating deep neck infection and descending necrotizing mediastinits caused by odontogenic infections
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Ying-Hsien Li, Cheng-Hui Wang, Shio-Shin Jean, Fu-Lun Chen, Wen-Sen Lee, and Jer-Hwa Chang
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Microbiology ,QR1-502 - Published
- 2020
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12. Carbapenem-Resistant Enterobacterales in Long-Term Care Facilities: A Global and Narrative Review
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Hsin-Yu Chen, Shio-Shin Jean, Yu-Lin Lee, Min-Chi Lu, Wen-Chien Ko, Po-Yu Liu, and Po-Ren Hsueh
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Enterobacteriaceae ,long-term care facilities ,oxacillinase ,carbapenemases ,metallo-beta-lactamase ,Microbiology ,QR1-502 - Abstract
The emergence of carbapenem-resistant Enterobacterales (CRE) has become a major public health concern. Moreover, its colonization among residents of long-term care facilities (LTCFs) is associated with subsequent infections and mortality. To further explore the various aspects concerning CRE in LTCFs, we conducted a literature review on CRE colonization and/or infections in long-term care facilities. The prevalence and incidence of CRE acquisition among residents of LTCFs, especially in California, central Italy, Spain, Japan, and Taiwan, were determined. There was a significant predominance of CRE in LTCFs, especially in high-acuity LTCFs with mechanical ventilation, and thus may serve as outbreak centers. The prevalence rate of CRE in LTCFs was significantly higher than that in acute care settings and the community, which indicated that LTCFs are a vital reservoir for CRE. The detailed species and genomic analyses of CRE among LTCFs reported that Klebsiella pneumoniae is the primary species in the LTCFs in the United States, Spain, and Taiwan. KPC-2-containing K. pneumoniae strains with sequence type 258 is the most common sequence type of KPC-producing K. pneumoniae in the LTCFs in the United States. IMP-11- and IMP-6-producing CRE were commonly reported among LTCFs in Japan. OXA-48 was the predominant carbapenemase among LTCFs in Spain. Multiple risk factors associated with the increased risk for CRE acquisition in LTCFs were found, such as comorbidities, immunosuppressive status, dependent functional status, usage of gastrointestinal devices or indwelling catheters, mechanical ventilation, prior antibiotic exposures, and previous culture reports. A high CRE acquisition rate and prolonged CRE carriage duration after colonization were found among residents in LTCFs. Moreover, the patients from LTCFs who were colonized or infected with CRE had poor clinical outcomes, with a mortality rate of up to 75% in infected patients. Infection prevention and control measures to reduce CRE in LTCFs is important, and could possibly be controlled via active surveillance, contact precautions, cohort staffing, daily chlorhexidine bathing, healthcare-worker education, and hand-hygiene adherence.
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- 2021
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13. Comparison of commonly used antimicrobial susceptibility testing methods for evaluating susceptibilities of clinical isolates of Enterobacteriaceae and nonfermentative Gram-negative bacilli to cefoperazone–sulbactam
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Shio-Shin Jean, Chun-Hsing Liao, Wang-Huei Sheng, Wen-Sen Lee, and Po-Ren Hsueh
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cefoperazone–sulbactam ,disk diffusion ,phoenix system ,susceptibility test ,Vitek 2 system ,Microbiology ,QR1-502 - Abstract
Background/Purpose: The aim of this study was to investigate the cefoperazone–sulbactam (CFP–SUL) susceptibilities of important Gram-negative bacteria (GNB) by agar dilution (reference method), disk diffusion, and two automated methods. Methods: A total of 799 GNB isolates, including Enterobacteriaceae (n = 500) and nonfermentative GNB (NFGNB, n = 299), were recovered from various clinical specimens collected at National Taiwan University Hospital, Taipei, Taiwan from November 2013 to December 2014. The agar dilution method, disk diffusion method, and two automated susceptibility systems (Phoenix and Vitek 2) were used for testing susceptibility of the isolates to CFP–SUL. Categories of susceptibility (susceptible, intermediate, or resistant) to CFP–SUL yielded from each method were interpreted according to CFP–SUL interpretive breakpoints proposed previously. The results of categorical agreement and errors obtained between the agar dilution method and the other three methods were analyzed. Results: The Vitek 2 system had the highest error rates against Escherichia coli (n = 150) and Enterobacter cloacae (n = 77) isolates, i.e., 6.7% and 11.7% minor errors, 8.5% and 1.7% major errors, and 40% and 20% very major errors, respectively. Additionally, the Vitek 2 system was also found to have a significantly lower sensitivity (44.4%) and lower positive predictive value (18.2%) for detecting CFP–SUL nonsusceptible E. coli isolates than other methods. For carbapenem-nonsusceptible Enterobacteriaceae isolates, the Vitek 2 system failed to detect correct susceptibility to CFP–SUL. The three methods failed to correctly detect CFP–SUL susceptibility categories against all NFGNB isolates except Pseudomonas aeruginosa. Conclusion: The Vitek 2 system is a suboptimal method in correctly detecting CFP–SUL susceptibility categories for E. coli, E. cloacae, and carbapenem-nonsusceptible Enterobacteriaceae isolates.
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- 2017
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14. Pulmonary empyema caused by co-infections of Mycoplasma pneumoniae and Fusobacterium necrophorum: A rare case of lemierre syndrome
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Fu-Lun Chen, Shio-Shin Jean, and Tsong-Yih Ou
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Microbiology ,QR1-502 - Published
- 2017
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15. Carbapenem-Resistant Enterobacteriaceae Infections: Taiwan Aspects
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Shio-Shin Jean, Nan-Yao Lee, Hung-Jen Tang, Min-Chi Lu, Wen-Chien Ko, and Po-Ren Hsueh
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carbapenem-resistant Enterobacteriaceae ,carbapenemase ,Klebsiella pneumoniae ,Escherichia coli ,long-term care facility ,tigecycline ,Microbiology ,QR1-502 - Abstract
Carbapenem-resistant Enterobacteriaceae (CRE), a major resistance concern emerging during the last decade because of significantly compromising the efficacy of carbapenem agents, has currently become an important focus of infection control. Many investigations have shown a high association of CRE infections with high case-fatality rates. In Taiwan, a few surveys observed that a significant proportion (29–47%) of the CR-Klebsiella pneumoniae isolates harbored a plasmidic allele encoding K. pneumoniae carbapenemases (KPC, especially KPC-2). A significant increase in the number of oxacillinase (OXA)-48-like carbapenemases among CR-K. pneumoniae isolates was observed between 2012 and 2015. By striking contrast, isolates of CR-Escherichia coli and CR-Enterobacter species in Taiwan had a much lower percentage of carbapenemase production than CR-K. pneumoniae isolates. This differs from isolates found in China as well as in the India subcontinent. Apart from the hospital setting, CRE was also cultured from the inpatients from communities or long-term care facilities (LTCF). Therefore, implementation of regular CRE screening of LTCF residents, strict disinfectant use in nursing homes and hospital settings, and appropriate control of antibiotic prescriptions is suggested to alleviate the spread of clinical CRE isolates in Taiwan. Although there are some promising new antibiotics against CRE, such as ceftazidime-avibactam, meropenem-vaborbactam, aztreonam-avibactam and cefiderocol, these agents are not available in Taiwan currently. Therefore, in order to effectively decrease case-fatality rates among patients with the infections owing to carbapenemase-producing CRE isolates, combination antibiotic schemes, including colistin (or amikacin) and/or tigecycline in combination with an anti-pseudomonal carbapenem agent, remain the mainstay for treating clinical CRE infections.
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- 2018
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16. Corrigendum to 'Comparison of commonly used antimicrobial susceptibility testing methods for evaluating susceptibilities of clinical isolates of Enterobacteriaceae and nonfermentative Gram-negative bacilli to cefoperazone-sulbactam' [J Microbiol Immunol Infect (2017) 50: 454–463]
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Shio-Shin Jean, Chun-Hsing Liao, Wang-Huei Sheng, Wen-Sen Lee, and Po-Ren Hsueh
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Microbiology ,QR1-502 - Published
- 2018
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17. Corrigendum to 'Rates of susceptibility of carbapenems, ceftobiprole, and colistin against clinically important bacteria collected from intensive care units in 2007: Results from the Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART)' [J Microbiol Immunol Infect 49 (2016) 969–976]
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Shio-Shin Jean, Wen-Sen Lee, Kwok-Woon Yu, Chun-Hsing Liao, Chin-Wan Hsu, Feng-Yi Chang, Wen-Chien Ko, Ray-Jade Chen, Jiunn-Jong Wu, Yen-Hsu Chen, Yao-Shen Chen, Jien-Wei Liu, Min-Chi Lu, Carlos Lam, Cheng-Yi Liu, and Po-Ren Hsueh
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Microbiology ,QR1-502 - Published
- 2018
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18. Streptococcus sanguis bacteremia complicating endocarditis associated with colonic adenocarcinoma
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Fu-Lun Chen, Shio-Shin Jean, and Tsong-Yih Ou
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Microbiology ,QR1-502 - Published
- 2017
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19. Antimicrobial Drug Resistance in Taiwan
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Shio-Shin Jean and Po-Ren Hsueh
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antimicrobial resistance ,extended-spectrum β-lactamase ,extensively-drug resistant ,multidrug-resistant ,Taiwan ,Medicine (General) ,R5-920 - Abstract
Antimicrobial resistance is a major global health threat associated with high mortality rates and high medical costs. Geographic variations in resistance profiles of bacterial and fungal pathogens have had a considerable impact on antimicrobial prescription. In Taiwan, there is an alarmingly high prevalence of penicillin-resistant Streptococcus pneumoniae, multidrug-resistant and extensively drug-resistant (XDR) Pseudomonas aeruginosa and Acinetobacter baumannii, extended-spectrum β-lactamase-producing Klebsiella pneumoniae, penicillin- and fluoroquinolone-resistant Neisseria gonorrhoeae, and azole-resistant Candida species. In addition, the emergence of XDR Mycobacterium tuberculosis has illustrated the need for regular monitoring of the resistance profiles of clinical isolates. A few clones of XDR A. baumannii and methicillin-resistant Staphylococcus aureus of unique sequence type (ST 59) have disseminated in Taiwanese hospital settings. Besides, the existence of a transposon-harboring carbapenemase gene has been verified in XDR P aeruginosa strains throughout Taiwan. An end to the worsening trends in the emergence of antimicrobial resistance will require continuous survey of resistance data from clinical isolates and effective implementation of strict infection control policies in healthcare settings and animal husbandry.
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- 2011
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20. Corrigendum to 'Comparison of the clinical efficacy between tigecycline plus extended-infusion imipenem and sulbactam plus imipenem against ventilator-associated pneumonia with pneumonic extensively drug-resistant Acinetobacter baumannii bacteremia, and correlation of clinical efficacy with in vitro synergy tests' [J Microbiol Immunol Infect (2015) 924–933]
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Shio-Shin Jean, Tai-Chin Hsieh, Chin-Wan Hsu, Wen-Sen Lee, Kuan-Jen Bai, and Carlos Lam
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Microbiology ,QR1-502 - Published
- 2018
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21. Multicenter surveillance of in vitro activities of cefepime-zidebactam, cefepime-enmetazobactam, omadacycline, eravacycline, and comparator antibiotics against Enterobacterales, Pseudomonas aeruginosa, and Acinetobacter baumannii complex causing bloodstream infection in Taiwan, 2020
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Shio-Shin Jean, Wen-Chien Ko, Min-Chi Lu, Wen-Sen Lee, and Po-Ren Hsueh
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Microbiology (medical) ,Infectious Diseases ,Virology ,Microbiology - Published
- 2022
22. In vitro susceptibility of ceftaroline against clinically important Gram-positive cocci, Haemophilus species and Klebsiella pneumoniae in Taiwan: Results from the Antimicrobial Testing Leadership and Surveillance (ATLAS) in 2012–2018
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Wen Sen Lee, Po-Ren Hsueh, Wen Chien Ko, and Shio Shin Jean
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0301 basic medicine ,Microbiology (medical) ,Staphylococcus aureus ,Klebsiella pneumoniae ,030106 microbiology ,Haemophilus ,Taiwan ,Microbial Sensitivity Tests ,medicine.disease_cause ,Microbiology ,Haemophilus influenzae ,03 medical and health sciences ,0302 clinical medicine ,Haemophilus parainfluenzae ,Staphylococcus epidermidis ,Streptococcus pneumoniae ,medicine ,Humans ,Immunology and Allergy ,030212 general & internal medicine ,Respiratory Tract Infections ,Gram-Positive Bacterial Infections ,General Immunology and Microbiology ,biology ,business.industry ,Soft Tissue Infections ,Broth microdilution ,General Medicine ,biology.organism_classification ,Methicillin-resistant Staphylococcus aureus ,QR1-502 ,Anti-Bacterial Agents ,Cephalosporins ,Gram-Positive Cocci ,Ceftaroline ,Infectious Diseases ,Susceptibility ,business - Abstract
Background/Purpose Ceftaroline, with a unique activity against methicillin-resistant Staphylococcus aureus (MRSA), was not launched in Taiwan before 2019. The in vitro susceptibility data of ceftaroline against important Taiwanese pathogens are lacking. Methods The in vitro susceptibility of ceftaroline against important pathogens collected from 2012 through 2018 were extracted from the Antimicrobial Testing Leadership and Surveillance program. Broth microdilution method was used to determine the minimum inhibitory concentrations (MICs) to ceftaroline against all isolates. Results During the study period, the in vitro data regarding isolates of S. aureus (n = 2049), Staphylococcus epidermidis (n = 185), Streptococcus pneumoniae (n = 334), Streptococcus pyogenes (n = 170), Haemophilus influenzae (n = 75), Haemophilus parainfluenzae (n = 10) and Klebsiella pneumoniae (n = 680) regardless of hospital sites of collection were analyzed. Among the S. aureus isolates studied, 19.4% showed MICs of 1 mg/L to ceftaroline, and 4.4% showed in vitro susceptible-dose dependent to ceftaroline (all MICs, 2 mg/L). Most of other Gram-positive cocci, all H. influenzae and H. parainfluenzae isolates were susceptible to ceftaroline. By contrast, about one-third (35.9%) of K. pneumoniae isolates, irrespective of infection sources, exhibited non-susceptibility to ceftaroline (MIC range, 0.015–256 mg/L; MIC50 and MIC90 values, 0.12 and 256 mg/L, respectively). Conclusions From the pharmacodynamic perspectives, the ceftaroline dosage of 600 mg as a 2-h intravenous infusion every 8 h is effective against all S. aureus and other Gram-positive isolates regardless of acquisition sites in Taiwan. Before ceftaroline is prescribed in treatment of the patient with Gram-negative infection, a cautious evaluation about patient's healthcare-associated factor is warranted.
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- 2021
23. Off-label use versus formal recommendations of conventional and novel antibiotics for the treatment of infections caused by multidrug-resistant bacteria
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Shio-Shin Jean, I-Min Liu, Po-Chuen Hsieh, Dai-Huang Kuo, Yi-Lien Liu, and Po-Ren Hsueh
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Microbiology (medical) ,Infectious Diseases ,Pharmacology (medical) ,General Medicine - Published
- 2023
24. Differential time-lag effects of ambient PM2.5 and PM2.5-bound PAHs on asthma emergency department visits
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Wen Cheng Huang, Chin Wang Hsu, Jer Hwa Chang, Chung Te Liu, Shih Chang Hsu, Shau Ku Huang, Shio Shin Jean, Yuan Pin Hsu, and Chon-Lin Lee
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medicine.medical_specialty ,Exacerbation ,business.industry ,Health, Toxicology and Mutagenesis ,Time lag ,Subgroup analysis ,General Medicine ,Emergency department ,010501 environmental sciences ,medicine.disease ,01 natural sciences ,Pollution ,symbols.namesake ,Environmental health ,Relative risk ,Epidemiology ,symbols ,Environmental Chemistry ,Medicine ,Poisson regression ,business ,0105 earth and related environmental sciences ,Asthma - Abstract
Epidemiological studies have suggested the effects of ambient fine particles (PM2.5) on asthma, but the effects of specific components of PM2.5 on asthma remain to be explored. Here, we studied the effect of PM2.5-bound polycyclic aromatic hydrocarbons (PAHs) on asthma acute exacerbation. The data on daily counts of emergency room visits (ERVs) were obtained from Wan Fang Medical Center, Taipei, Taiwan, from 2012 to 2015. The daily concentrations of PM2.5 and pollutant gases were obtained from a local air quality monitoring station. The levels of PM2.5-bound PAH were estimated by an established grid-scale model. Relative risks for ERVs as the increase in the level of ambient pollutants were calculated by using a generalized additive model of Poisson regression. In the present study, we observed statistically significant positive associations between PM2.5 and asthma ERVs for all age groups. PM2.5-bound PAH was also associated with asthma ERVs for all age groups. In the adult subgroup analysis, there was a significant association between PM2.5-bound PAH and asthma ERVs at lags 1 and 2 (RR 1.289, 95% CI 1.050-1.582 and RR 1.242, 95% CI 1.039-1.485). The impacts of air pollution on the risk of pediatric asthma ERV were found to be significant for PM2.5 at lag day 0 (RR 1.310, 95% CI 1.069-1.606). Moreover, pediatric asthma ERVs were significantly associated with the levels of PM2.5-bound PAH at lag 1 and 2 days (RR 1.576, 95% CI 1.371-1.810 and RR 1.426, 95% CI 1.265-1.607). The study provides evidence that PM2.5-bound PAHs were associated with an increased risk of asthma attacks. Our data further suggested that traffic exhaust is a primary source of PM2.5-bound PAHs.
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- 2020
25. Global Threat of Carbapenem-Resistant Gram-Negative Bacteria
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Shio-Shin Jean, Dorji Harnod, and Po-Ren Hsueh
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Microbiology (medical) ,Infectious Diseases ,Carbapenems ,Drug Resistance, Multiple, Bacterial ,Immunology ,Gram-Negative Bacteria ,Microbial Sensitivity Tests ,Microbiology ,Anti-Bacterial Agents - Abstract
Infections caused by multidrug-resistant (MDR) and extensively drug-resistant (XDR) Gram-negative bacteria (GNB), including carbapenem-resistant (CR) Enterobacterales (CRE; harboring mainly blaKPC, blaNDM, and blaOXA-48-like genes), CR- or MDR/XDR-Pseudomonas aeruginosa (production of VIM, IMP, or NDM carbapenemases combined with porin alteration), and Acinetobacter baumannii complex (producing mainly OXA-23, OXA-58-like carbapenemases), have gradually worsened and become a major challenge to public health because of limited antibiotic choice and high case-fatality rates. Diverse MDR/XDR-GNB isolates have been predominantly cultured from inpatients and hospital equipment/settings, but CRE has also been identified in community settings and long-term care facilities. Several CRE outbreaks cost hospitals and healthcare institutions huge economic burdens for disinfection and containment of their disseminations. Parenteral polymyxin B/E has been observed to have a poor pharmacokinetic profile for the treatment of CR- and XDR-GNB. It has been determined that tigecycline is suitable for the treatment of bloodstream infections owing to GNB, with a minimum inhibitory concentration of ≤ 0.5 mg/L. Ceftazidime-avibactam is a last-resort antibiotic against GNB of Ambler class A/C/D enzyme-producers and a majority of CR-P. aeruginosa isolates. Furthermore, ceftolozane-tazobactam is shown to exhibit excellent in vitro activity against CR- and XDR-P. aeruginosa isolates. Several pharmaceuticals have devoted to exploring novel antibiotics to combat these troublesome XDR-GNBs. Nevertheless, only few antibiotics are shown to be effective in vitro against CR/XDR-A. baumannii complex isolates. In this era of antibiotic pipelines, strict implementation of antibiotic stewardship is as important as in-time isolation cohorts in limiting the spread of CR/XDR-GNB and alleviating the worsening trends of resistance.
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- 2021
26. In vitro susceptibilities of isolates of potentially naturally inducible chromosomal AmpC-producing metallo-β-lactamase-negative carbapenem-resistant Enterobacterales species to ceftazidime-avibactam: Data from the Antimicrobial Testing Leadership and Surveillance Programme, 2012–2019
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Shio-Shin Jean, Yu-Lin Lee, Chin-Wang Hsu, and Po-Ren Hsueh
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Microbiology (medical) ,Drug Combinations ,Leadership ,Infectious Diseases ,Carbapenems ,Escherichia coli ,Pharmacology (medical) ,Microbial Sensitivity Tests ,General Medicine ,Azabicyclo Compounds ,Ceftazidime ,beta-Lactamases ,Anti-Bacterial Agents - Abstract
A total of 74 570 potentially naturally inducible chromosomal AmpC-producing (PNIC-AmpC) Enterobacterales isolates included in the Antimicrobial Testing Leadership and Surveillance Programme were obtained worldwide during 2012-2019 (22 503 from 2012-2014 and 52 067 from 2015-2019). Of these isolates, 117 and 711 obtained during 2012-2014 and 2015-2019, respectively, were carbapenem-resistant Enterobacterales (PNIC-AmpC-CRE). The MICs of ceftazidime-avibactam for these isolates were determined using the broth microdilution method.Genes encoding different Ambler classes of β-lactamases were investigated using multiplex PCR. After 97 isolates harbouring genes encoding metallo-β-lactamases (MβL) were excluded, 731 PNIC-AmpC MβL-negative CRE isolates (101 from 2012-2014 and 630 from 2015-2019) were included in this study.Enterobacter cloacae (E. cloacae) complex species, Escherichia coli (E. coli) and Citrobacter freundii (C. freundii) complex species accounted for 36.3% (n = 265), 30.4% (n = 222) and 11.8% (n = 86), respectively, followed by Providencia species (n = 72), Serratia species (n = 52) and Klebsiella aerogenes (n = 34). The resistance rates to ceftazidime-avibactam for the overall PNIC-AmpC MβL-negative CRE isolates markedly differed between the two periods (35.6% vs. 63.3%; P0.001). Similar trends were observed for the MβL-negative-CR-E. cloacae complex species (47.4% vs. 65.2%; P = 0.046) and MβL-negative-CR-E. coli (16.2% vs. 63.8%; P0.001) but not for MβL-negative-CR-C. freundii complex species (40% vs. 62%; P = 0.153). Amongst the PNIC-AmpC MβL-negative CRE isolates, resistance rates to ceftazidime-avibactam worsened.Caution should be taken when empirically prescribing ceftazidime-avibactam for infections caused by PNIC-AmpC-CRE before susceptibility data are available.
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- 2022
27. Lemierre syndrome complicating deep neck infection and descending necrotizing mediastinits caused by odontogenic infections
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Wen Sen Lee, Fu Lun Chen, Shio Shin Jean, Ying Hsien Li, Cheng Hui Wang, and Jer Hwa Chang
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Microbiology (medical) ,medicine.medical_specialty ,General Immunology and Microbiology ,business.industry ,Treatment outcome ,lcsh:QR1-502 ,General Medicine ,lcsh:Microbiology ,Odontogenic ,Infectious Diseases ,X ray computed ,medicine ,Immunology and Allergy ,Combined Modality Therapy ,Lemierre Syndrome ,Radiology ,business - Published
- 2020
28. New Drugs for Multidrug-Resistant Gram-Negative Organisms: Time for Stewardship
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Wen Sen Lee, Shio-Shin Jean, Po-Ren Hsueh, and Ian M. Gould
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medicine.drug_class ,Avibactam ,Antibiotics ,Drug resistance ,beta-Lactams ,Plazomicin ,beta-Lactamases ,Microbiology ,Cyclooctanes ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Bacterial Proteins ,Drug Resistance, Multiple, Bacterial ,Gram-Negative Bacteria ,Humans ,Medicine ,Pharmacology (medical) ,Vaborbactam ,biology ,business.industry ,biology.organism_classification ,Eravacycline ,Anti-Bacterial Agents ,Cephalosporins ,Acinetobacter baumannii ,Multiple drug resistance ,Drug Combinations ,chemistry ,030220 oncology & carcinogenesis ,beta-Lactamase Inhibitors ,business ,Azabicyclo Compounds ,030217 neurology & neurosurgery - Abstract
A gradual rise in drug-resistant trends among Gram-negative organisms, especially carbapenem-resistant (CR) Enterobacteriaceae (CRE), CR-Pseudomonas aeruginosa, and extensively-drug-resistant (XDR) Acinetobacter baumannii, poses an enormous threat to healthcare systems worldwide. In the last decade, many pharmaceutical companies have devoted enormous resources to the development of new potent antibiotics against XDR Gram-negative pathogens, particularly CRE. Some of these novel antibiotics against CRE strains are β-lactam/β-lactamase-inhibitor combination agents, while others belong to the non-β-lactam class. Most of these antibiotics display good in vitro activity against the producers of Ambler class A, C, and D β-lactamase, although avibactam and vaborbactam are not active in vitro against metallo-β-lactamase (MβL) enzymes. Nevertheless, in vitro efficacy against the producers of some or all class B enzymes (New Delhi MβL, Verona integron-encoded MβL, etc) has been shown with cefepime-zidebactam, aztreonam-avibactam, VNRX-5133, cefiderocol, plazomicin, and eravacycline. As of Feburary 2019, drugs approved for treatment of some CRE-related infections by the US Food and Drug Administration included ceftazidime-avibactam, meropenem-vaborbactam, plazomicin, and eravacycline. Although active against extended-spectrum and AmpC β-lactamase-producing Enterobacteriaceae, delafloxacin does not show in vitro activity against CRE. Murepavadin is shown to be specifically active against CR- and colistin-resistant P. aeruginosa strains. Despite successful development of novel antibiotics, strict implementation of an antibiotic stewardship policy in combination with the use of well-established phenotypic tests and novel multiplex PCR methods for detection of the most commonly encountered β-lactamases/carbapenemases in hospitals is important for prescribing effective antibiotics against CRE and decreasing the resistance burden due to CRE.
- Published
- 2019
29. Non-susceptibilities to antibiotics against important Gram-negative bacteria, and imipenem-relebactam, meropenem-vaborbactam against carbapenem non-susceptible Enterobacterales and Pseudomonas aeruginosa isolates implicated in complicated intra-abdominal and urinary tract infections in Taiwan, 2019
- Author
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Shio-Shin Jean, Min-Chi Lu, Mao-Wang Ho, Wen-Chien Ko, and Po-Ren Hsueh
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Microbiology (medical) ,Taiwan ,Meropenem ,Microbial Sensitivity Tests ,General Medicine ,Boronic Acids ,Anti-Bacterial Agents ,Imipenem ,Infectious Diseases ,Carbapenems ,Gram-Negative Bacteria ,Pseudomonas aeruginosa ,Urinary Tract Infections ,Humans ,Pharmacology (medical) ,Azabicyclo Compounds - Abstract
Susceptibility of isolates of top-ranking Enterobacterales species and Pseudomonas aeruginosa implicated in complicated intra-abdominal infections (cIAI) and urinary tract infections (cUTI) to important antibiotics, including imipenem-relebactam (IMR) and meropenem-vaborbactam (MVB), in Taiwan in 2019 were evaluated.MICs to various antibiotics were determined using broth microdilution method. Susceptibility results were interpreted mainly based on the MIC breakpoints of the Clinical and Laboratory Standards Institute (CLSI) 2021, but susceptibilities of IMR and MVB were interpreted based on the CLSI and European Committee on Antimicrobial Susceptibility Testing (EUCAST) 2021. Resistance genes amongst carbapenem-non-susceptible (NS) Gram-negative bacteria (GNB) were investigated using multiplex polymerase chain reaction (PCR). Escherichia coli (n = 356), Klebsiella pneumoniae (n = 165) and Enterobacter cloacae complex (n = 42) isolates accounted for 85.3% of the 660 Enterobacterales isolates.The non-susceptibility rates of imipenem (IPM), IMR against isolates of non-Morganellaceae Enterobacterales, and meropenem (MEM), MVB against all Enterobacterales isolates were 92.2%/94.8%, 98.4-98.7%/98.4-99%, 95%/98.2% and 98.8-100%/99.4-100% for the cIAI/cUTI subgroups, respectively. Amongst the 40 IPM-NS-non-Morganellaceae Enterobacterales isolates, when the CLSI 2021 criteria were applied, 10 were NS to IMR, and four Klebsiella pneumoniae isolates (harbouring blaContinuous monitoring of susceptibility to clinically important GNB is warranted.
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- 2022
30. Extra-respiratory manifestations of COVID-19
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Wen Chien Ko, Ping-Ing Lee, Po-Ren Hsueh, Shio Shin Jean, and Chih-Cheng Lai
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0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,Poor prognosis ,Extra-respiratory manifestations ,Coronavirus disease 2019 (COVID-19) ,Epidemiology ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,030106 microbiology ,Pneumonia, Viral ,Article ,03 medical and health sciences ,Betacoronavirus ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Pharmacology (medical) ,030212 general & internal medicine ,Respiratory system ,Adverse effect ,Pandemics ,business.industry ,SARS-CoV-2 ,Acute kidney injury ,COVID-19 ,General Medicine ,medicine.disease ,medicine.anatomical_structure ,Infectious Diseases ,business ,Coronavirus Infections ,Respiratory tract - Abstract
Highlights • Most COVID-19 patients show fever and respiratory symptoms, however they may present extra-respiratory manifestations. • Cardiac, gastrointestinal, hepatic, renal, neurologic, olfactory, gustatory, ocular, cutaneous and haematologic symptoms. • Extra-respiratory symptoms/signs may represent the initial presentation of SARS-CoV-2 infection. • This review is aimed to help clinicians better understand the range of clinical presentations associated with SARS-CoV-2., Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has become a global health threat. Although most patients with COVID-19 manifest fever and respiratory tract symptoms, SARS-CoV-2 infection may also involve other organs/systems and present with extra-respiratory manifestations, including cardiac, gastrointestinal, hepatic, renal, neurological, olfactory, gustatory, ocular, cutaneous and haematological symptoms. Occasionally, these extra-respiratory symptoms/signs represent the initial presentation of SARS-CoV-2 infection, prior to fever or respiratory manifestations. Therefore, this comprehensive review of the extra-respiratory manifestations of COVID-19 is intended to help clinicians better understand the range of clinical presentations associated with SARS-CoV-2 infection, allowing the consideration of COVID-19 in differential diagnoses. A screening test for SARS-CoV-2 should be performed when patients have these extra-respiratory manifestations. In addition, clinicians should be alerted to the adverse effects of anti-SARS-CoV-2 agents that can mimic the extra-respiratory manifestations of COVID-19. Moreover, some extra-respiratory manifestations, such as ocular and gastrointestinal involvement, may be caused by direct invasion of SARS-CoV-2. Therefore, protective measures should be taken while managing the associated clinical specimens. Finally, several extra-respiratory manifestations, such as cardiac involvement, acute kidney injury, coagulation disorders and thrombotic complications, could be associated with a poor prognosis.
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- 2020
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31. Old and re-purposed drugs for the treatment of COVID-19
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Shio Shin Jean and Po-Ren Hsueh
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0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,re-purposed ,030106 microbiology ,Pneumonia, Viral ,Remdesivir ,Angiotensin-Converting Enzyme Inhibitors ,favipiravir ,Azithromycin ,Antiviral Agents ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Angiotensin Receptor Antagonists ,Betacoronavirus ,0302 clinical medicine ,Tocilizumab ,Virology ,medicine ,Humans ,Immunologic Factors ,030212 general & internal medicine ,Medical prescription ,Intensive care medicine ,Adverse effect ,Special Report ,Pandemics ,business.industry ,SARS-CoV-2 ,Drug Repositioning ,COVID-19 ,Hydroxychloroquine ,medicine.disease ,COVID-19 Drug Treatment ,Clinical trial ,Regimen ,Cytokine release syndrome ,Treatment Outcome ,Infectious Diseases ,chemistry ,business ,Coronavirus Infections ,medicine.drug ,Research Article - Abstract
Introduction The coronavirus disease 2019 (COVID-19) caused by the novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has developed since December 2019. It has caused a global pandemic with more than three hundred thousand case fatalities. However, apart from supportive care by respirators, no standard medical therapy is validated. Areas covered This paper presents old drugs with potential in vitro efficacy against SARS-CoV-2. The in vitro database, adverse effects, and potential toxicities of these drugs are reviewed regarding their feasibility of clinical prescription for the treatment of patients with COVID-19. To obtain convincing recommendations, we referred to opinions from the US National Institute of Health regarding drugs repurposed for COVID-19 therapy. Expert opinion Although strong evidence of well-designed randomized controlled studies regarding COVID-19 therapy is presently lacking, remdesivir, teicoplanin, hydroxychloroquine (not in combination with azithromycin), and ivermectin might be effective antiviral drugs and are deemed promising candidates for controlling SARS-CoV-2. In addition, tocilizumab might be considered as the supplementary treatment for COVID-19 patients with cytokine release syndrome. In future, clinical trials regarding a combination of potentially effective drugs against SARS-CoV-2 need to be conducted to establish the optimal regimen for the treatment of patients with moderate-to-severe COVID-19.
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- 2020
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32. Differential time-lag effects of ambient PM
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Shih-Chang, Hsu, Jer-Hwa, Chang, Chon-Lin, Lee, Wen-Cheng, Huang, Yuan-Pin, Hsu, Chung-Te, Liu, Shio-Shin, Jean, Shau-Ku, Huang, and Chin-Wang, Hsu
- Subjects
Adult ,Air Pollutants ,Air Pollution ,Taiwan ,Humans ,Particulate Matter ,Seasons ,Polycyclic Aromatic Hydrocarbons ,Child ,Emergency Service, Hospital ,Asthma - Abstract
Epidemiological studies have suggested the effects of ambient fine particles (PM
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- 2020
33. Treatment options for COVID-19: the reality and challenges
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Po-Ren Hsueh, Shio Shin Jean, and Ping-Ing Lee
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0301 basic medicine ,viruses ,lcsh:QR1-502 ,Azithromycin ,Pharmacology ,lcsh:Microbiology ,Lopinavir ,chemistry.chemical_compound ,0302 clinical medicine ,Immunology and Allergy ,Medicine ,030212 general & internal medicine ,Alanine ,General Medicine ,Drug Combinations ,Infectious Diseases ,Pyrazines ,Coronavirus Infections ,Non-steroidal anti-inflammatory drugs ,Hydroxychloroquine ,medicine.drug ,Microbiology (medical) ,Pneumonia, Viral ,030106 microbiology ,Remdesivir ,Favipiravir ,Antiviral Agents ,Betacoronavirus ,03 medical and health sciences ,Humans ,Potency ,Protease inhibitor (pharmacology) ,Pandemics ,COVID-19 Serotherapy ,Ritonavir ,General Immunology and Microbiology ,SARS-CoV-2 ,business.industry ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Ribavirin ,Immunization, Passive ,COVID-19 ,RNA-Dependent RNA Polymerase ,Amides ,Adenosine Monophosphate ,Coronavirus disease 2019 (COVID-19) ,Angiotensin converting enzyme inhibitors ,Regimen ,chemistry ,coronavirus disease 2019 ,remdesivir ,angiotensin converting enzyme inhibitors ,hydroxychloroquine ,non-steroidal anti-inflammatory drugs ,Teicoplanin ,business - Abstract
An outbreak related to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was first reported in Wuhan, China in December 2019. An extremely high potential for dissemination resulted in the global coronavirus disease 2019 (COVID-19) pandemic in 2020. Despite the worsening trends of COVID-19, no drugs are validated to have significant efficacy in clinical treatment of COVID-19 patients in large-scale studies. Remdesivir is considered the most promising antiviral agent; it works by inhibiting the activity of RNA-dependent RNA polymerase (RdRp). A large-scale study investigating the clinical efficacy of remdesivir (200 mg on day 1, followed by 100 mg once daily) is on-going. The other excellent anti-influenza RdRp inhibitor favipiravir is also being clinically evaluated for its efficacy in COVID-19 patients. The protease inhibitor lopinavir/ritonavir (LPV/RTV) alone is not shown to provide better antiviral efficacy than standard care. However, the regimen of LPV/RTV plus ribavirin was shown to be effective against SARS-CoV in vitro. Another promising alternative is hydroxychloroquine (200 mg thrice daily) plus azithromycin (500 mg on day 1, followed by 250 mg once daily on day 2–5), which showed excellent clinical efficacy on Chinese COVID-19 patients and anti-SARS-CoV-2 potency in vitro. The roles of teicoplanin (which inhibits the viral genome exposure in cytoplasm) and monoclonal and polyclonal antibodies in the treatment of SARS-CoV-2 are under investigation. Avoiding the prescription of non-steroidal anti-inflammatory drugs, angiotensin converting enzyme inhibitors, or angiotensin II type I receptor blockers is advised for COVID-19 patients.
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- 2020
34. Epidemiology, Treatment, and Prevention of Nosocomial Bacterial Pneumonia
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Chin Wan Hsu, Wei Cheng Lin, Yin Chun Chang, Po-Ren Hsueh, Wen Sen Lee, and Shio Shin Jean
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lcsh:Medicine ,extended-spectrum β-lactamase-producing Enterobacteriaceae species ,Tigecycline ,Review ,pseudomonas aeruginosa ,methicillin-resistant Staphylococcus aureus ,medicine.disease_cause ,Hospital-acquired pneumonia ,Microbiology ,03 medical and health sciences ,ventilator-associated pneumonia ,carbapenemase ,0302 clinical medicine ,medicine ,hospital-acquired pneumonia ,030212 general & internal medicine ,Elizabethkingia meningoseptica ,Acinetobacter baumannii complex species ,acinetobacter baumannii complex species ,0303 health sciences ,biology ,030306 microbiology ,business.industry ,ceftazidime-avibactam ,lcsh:R ,Bacterial pneumonia ,Ventilator-associated pneumonia ,General Medicine ,antibiotic combination ,biology.organism_classification ,medicine.disease ,bacterial infections and mycoses ,Methicillin-resistant Staphylococcus aureus ,methicillin-resistant staphylococcus aureus ,respiratory tract diseases ,Stenotrophomonas maltophilia ,Pseudomonas aeruginosa ,Colistin ,extensively drug-resistant ,business ,medicine.drug - Abstract
Septicaemia likely results in high case-fatality rates in the present multidrug-resistant (MDR) era. Amongst them are hospital-acquired pneumonia (HAP) and ventilator-associated pneumonia (VAP), two frequent fatal septicaemic entities amongst hospitalised patients. We reviewed the PubMed database to identify the common organisms implicated in HAP/VAP, to explore the respective risk factors, and to find the appropriate antibiotic choice. Apart from methicillin-resistant Staphylococcus aureus and Pseudomonas aeruginosa, extended-spectrum β-lactamase-producing Enterobacteriaceae spp., MDR or extensively drug-resistant (XDR)-Acinetobacter baumannii complex spp., followed by Stenotrophomonas maltophilia, Chryseobacterium indologenes, and Elizabethkingia meningoseptica are ranked as the top Gram-negative bacteria (GNB) implicated in HAP/VAP. Carbapenem-resistant Enterobacteriaceae notably emerged as an important concern in HAP/VAP. The above-mentioned pathogens have respective risk factors involved in their acquisition. In the present XDR era, tigecycline, colistin, and ceftazidime-avibactam are antibiotics effective against the Klebsiella pneumoniae carbapenemase and oxacillinase producers amongst the Enterobacteriaceae isolates implicated in HAP/VAP. Antibiotic combination regimens are recommended in the treatment of MDR/XDR-P. aeruginosa or A. baumannii complex isolates. Some special patient populations need prolonged courses (>7-day) and/or a combination regimen of antibiotic therapy. Implementation of an antibiotic stewardship policy and the measures recommended by the United States (US) Institute for Healthcare were shown to decrease the incidence rates of HAP/VAP substantially.
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- 2020
35. Bacteriophages and phage-delivered CRISPR-Cas system as antibacterial therapy
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Wen Chien Ko, Po-Ren Hsueh, Hsueh-Ju Lin, Min-Chi Lu, Shio-Shin Jean, Po-Yu Liu, Yu-Lin Lee, and Ting-Kuang Yeh
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Microbiology (medical) ,Phage therapy ,medicine.drug_class ,medicine.medical_treatment ,Antibiotics ,Microbiology ,Antibiotic resistance ,Drug Resistance, Bacterial ,medicine ,Humans ,CRISPR ,Bacteriophages ,Pharmacology (medical) ,Phage Therapy ,biology ,business.industry ,Bacterial Infections ,General Medicine ,biology.organism_classification ,Antimicrobial ,Anti-Bacterial Agents ,Infectious Diseases ,Bacteriophage Therapy ,Antibacterial therapy ,CRISPR-Cas Systems ,business ,Bacteria - Abstract
Multidrug-resistant (MDR) bacterial infections in humans are increasing worldwide. The global spread of antimicrobial resistance poses a considerable threat to human health. Phage therapy is a promising approach to combat MDR bacteria. An increasing number of reports have been published on phage therapy and the successful application of antibacterials derived using this method. Additionally, the CRISPR-Cas system has been used to develop antimicrobials with bactericidal effects in vivo. The CRISPR-Cas system can be delivered into target bacteria in various ways, with phage-based vectors being reported as an effective method. In this review, we briefly summarise the results of randomised control trials on bacteriophage therapy. Moreover, we integrated mechanisms of the CRISPR-Cas system antimicrobials in a schematic diagram and consolidated the research on phage-delivered CRISPR-Cas system antimicrobials.
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- 2022
36. Ertapenem non-susceptibility and independent predictors of the carbapenemase production among the Enterobacteriaceae isolates causing intra-abdominal infections in the Asia-Pacific region: results from the Study for Monitoring Antimicrobial Resistance Trends (SMART)
- Author
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Shio Shin Jean, Wen Sen Lee, and Po-Ren Hsueh
- Subjects
0301 basic medicine ,Imipenem ,Klebsiella pneumoniae ,intra-abdominal infection ,Cefepime ,030106 microbiology ,Prevalence ,antimicrobial susceptibility ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Antibiotic resistance ,medicine ,Pharmacology (medical) ,Original Research ,Pharmacology ,biology ,Broth microdilution ,carbapenemase-producing Enterobacteriaceae ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Enterobacteriaceae ,Infectious Diseases ,ertapenem-non-susceptible ,chemistry ,Infection and Drug Resistance ,Ertapenem ,medicine.drug - Abstract
Shio-Shin Jean,1,2 Wen-Sen Lee,3,4 Po-Ren Hsueh5,6 on behalf of the SMART Asia-Pacific Group 1Department of Emergency, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan; 2Department of Emergency Medicine, Department of Emergency and Critical Care Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan; 3Division of Infectious Diseases, Department of Internal Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan; 4Department of Internal Medicine, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan; 5Departments of Laboratory Medicine, National Taiwan University Hospital, National Taiwan University College of Medicine, Taipei, Taiwan; 6Department of Internal Medicine, National Taiwan University Hospital, National Taiwan University College of Medicine, Taipei, Taiwan Objectives: This study investigated the prevalence rates of carbapenemase positivity, antibiotic susceptibility, and independent predictors of carbapenemase producers among the Enterobacteriaceae isolates recovered from patients with intra-abdominal infections (IAI) in the Asia-Pacific region between 2008 and 2014.Materials and methods: Multiplex PCR was used for the detection of specific β-lactamases, while the broth microdilution method was used to determine the minimum inhibitory concentrations (MICs) of antibiotics among the IAI-related Enterobacteriaceae isolates. We studied the abovementioned parameters in 484 ertapenem-non-susceptible (Erta-NS) isolates and explored the independent predictors of carbapenemase-producing Enterobacteriaceae (CPE) isolates.Results: Eighty (16.5%) Erta-NS-IAI Enterobacteriaceae isolates were found to be CPE. Vietnam and the Philippines had the highest CPE prevalence rates. The IAI isolates of Enterobacter species and Klebsiella pneumoniae followed by Escherichia coli were the three major pathogens with 77.4%, 40.9%, and 11.7% Erta-NS prevalence rates, respectively. Furthermore, the highest CPE prevalence (35%) was noted among the Erta-NS-K. pneumoniae isolates. The CPE isolates harboring the blaNDM, blaKPC, or blaOXA-48-like alleles had higher imipenem MIC levels than those harboring the blaIMP alleles. Using multivariate logistic regression analysis, we concluded that Erta-NS-IAI isolates with an imipenem non-susceptible phenotype (OR, 56.4), with cefepime MIC>8 µg/mL (OR, 4.4), cultured from the peritoneal space samples (tissue or abscess; OR, 3.3), and harboring the extended-spectrum β-lactamase encoding allele (OR, 11.5) are independent predictors of CPE.Conclusion: Imipenem non-susceptibility, cefepime MIC >8 μg/mL, and the peritoneal space as a culture site are independent clinical predictors of CPE among the Erta-NS-IAI Enterobacteriaceae isolates in the Asia-Pacific region. Keywords: intra-abdominal infection, antimicrobial susceptibility, ertapenem-non-susceptible, carbapenemase-producing Enterobacteriaceae
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- 2018
37. Ticagrelor: A promising role in preventing multi-organ failure among patients with sepsis due to resistant gram-positive cocci
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Juey-Jen Hwang, Shun Chung Hsueh, Shio Shin Jean, and Po-Ren Hsueh
- Subjects
Blood Platelets ,Microbiology (medical) ,Ticagrelor ,medicine.medical_specialty ,Adenosine ,Multiple Organ Failure ,Drug resistance ,Gastroenterology ,Sepsis ,Drug Resistance, Multiple, Bacterial ,Internal medicine ,medicine ,Animals ,Humans ,Immunology and Allergy ,Gram-Positive Cocci ,General Immunology and Microbiology ,business.industry ,General Medicine ,medicine.disease ,Multi organ ,Clopidogrel ,Anti-Bacterial Agents ,Infectious Diseases ,Purinergic P2Y Receptor Antagonists ,business ,Adenosine metabolism ,Platelet Aggregation Inhibitors ,medicine.drug - Published
- 2019
38. Breakthrough invasive Trichosporon asahii infection in an uremic patient with systemic calciphylaxis complicating necrotizing fasciitis during echinocandin therapy for C. tropicalis
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Wen Sen Lee, Po-Ren Hsueh, Fu Lun Chen, Cheng Hui Wang, Shio Shin Jean, and Yi Hsuan Tsai
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Microbiology (medical) ,C. tropicalis ,Calciphylaxis ,medicine.medical_specialty ,Fatal outcome ,General Immunology and Microbiology ,Echinocandin ,business.industry ,General Medicine ,Trichosporon asahii ,medicine.disease ,Dermatology ,Infectious Diseases ,Immunology and Allergy ,Medicine ,business ,Fasciitis ,medicine.drug - Published
- 2019
39. Role of vancomycin in the treatment of bacteraemia and meningitis caused by Elizabethkingia meningoseptica
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Shio Shin Jean, Tai Chin Hsieh, Po-Ren Hsueh, and Yong Zhong Ning
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0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,Combination therapy ,030106 microbiology ,Bacteremia ,Meningitis, Bacterial ,Immunocompromised Host ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Ciprofloxacin ,Disk Diffusion Antimicrobial Tests ,Flavobacteriaceae Infections ,Vancomycin ,Internal medicine ,medicine ,Humans ,Pharmacology (medical) ,030212 general & internal medicine ,Elizabethkingia meningoseptica ,Intensive care medicine ,biology ,business.industry ,Broth microdilution ,Infant, Newborn ,Linezolid ,Drug Synergism ,General Medicine ,Infant, Low Birth Weight ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,medicine.disease ,Anti-Bacterial Agents ,Treatment Outcome ,Infectious Diseases ,chemistry ,Drug Therapy, Combination ,Rifampin ,business ,Flavobacteriaceae ,Meningitis ,Rifampicin ,medicine.drug - Abstract
Elizabethkingia meningoseptica, a Gram-negative pathogen once deemed clinically insignificant, tends to cause infections among low-birth-weight infants and immunocompromised patients. Previously, vancomycin was reported to cure several patients with bacteraemia caused by E. meningoseptica. Nevertheless, some laboratory investigations also showed considerable discordance between in vitro vancomycin susceptibility results obtained by the disk diffusion and broth microdilution methods against clinical E. meningoseptica isolates as determined using the criteria for staphylococci recommended by the Clinical and Laboratory Standards Institute (CLSI). In this review, the PubMed database (1960-2017) was searched for studies that reported mainly cases with E. meningoseptica bacteraemia or meningitis treated with vancomycin alone or with regimens that included vancomycin. In addition, the in vitro synergy between vancomycin and other agents against isolates of E. meningoseptica was reviewed. Elizabethkingia meningoseptica bacteraemia appears not to universally respond to intravenous (i.v.) vancomycin-only therapy, especially in patients who require haemodialysis. If i.v. vancomycin is the favoured therapy against E. meningoseptica meningitis, the addition of ciprofloxacin, linezolid or rifampicin might be an option to effectively treat this difficult-to-treat infection. Further clinical studies are needed to determine the clinical efficacy of these combination regimens for the treatment of E. meningoseptica meningitis.
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- 2017
40. Antimicrobial susceptibilities of the ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales isolates causing intra-abdominal infections in the Asia-Pacific region during 2008-2014: Results from the Study for Monitoring the Antimicrobial Resistance Trends (SMART)
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Po-Ren Hsueh and Shio-Shin Jean
- Subjects
0301 basic medicine ,Microbiology (medical) ,Ertapenem ,Imipenem ,Asia ,Klebsiella pneumoniae ,Cefepime ,030106 microbiology ,Immunology ,Enterobacter ,Microbial Sensitivity Tests ,Pacific Islands ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Intra-abdominal infection ,0302 clinical medicine ,Enterobacteriaceae ,Ciprofloxacin ,Drug Resistance, Bacterial ,medicine ,Escherichia coli ,Immunology and Allergy ,Humans ,030212 general & internal medicine ,Amikacin ,Ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales ,biology ,Broth microdilution ,Enterobacteriaceae Infections ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,QR1-502 ,chemistry ,Population Surveillance ,Intraabdominal Infections ,medicine.drug - Abstract
Objectives: To investigate the susceptibility profiles amongst ertapenem-non-susceptible non-carbapenemase-producing Enterobacterales (ETP-NS-non-CPE) isolates. Methods: Minimum inhibitory concentrations (MICs) of 404 ETP-NS-non-CPE isolates collected from different intra-abdominal infection (IAI) sites amongst patients in the Asia-Pacific region during 2008–2014 were determined using the broth microdilution method. The susceptibility results were interpreted according to the MIC breakpoints recommended by the Clinical and Laboratory Standards Institute (CLSI) in 2018. The MICs data of several agents were evaluated based on their published pharmacokinetic/pharmacodynamic (PK/PD) profiles. Results: The majority (>84%) of IAI-ETP-NS-non-CPE isolates – including Escherichia coli (n = 83), Klebsiella pneumoniae (n = 91) and Enterobacter species (n = 210) – were susceptible to imipenem and amikacin. The 193 hepatobiliary ETP-NS-non-CPE isolates exhibited a trend of lower cefepime MIC (≤4 mg/L) distribution than those (n = 145) cultured from the peritoneal space (P = 0.058). Amongst the ETP-NS-non-CP Enterobacter isolates, 65.7% displayed a cefepime MIC ≤ 4 mg/L. In addition, compared with Escherichia coli and Klebsiella pneumoniae isolates, 82.9% and 72.9% of the ETP-NS-non-CP Enterobacter isolates were susceptible to levofloxacin and ciprofloxacin, respectively. Of note, 74.5% and 70.3% of the ETP-NS-non-CP Enterobacter isolates cultured from the hepatobiliary tract and peritoneal space exhibited a ciprofloxacin MIC ≤ 2 mg/L and ≤0.25 mg/L, respectively. Imipenem and amikacin showed good in vitro susceptibility rates against the IAI-ETP-NS-non-CPE isolates. The hepatobiliary ETP-NS-non-CPE displayed lower cefepime MICs than those cultured from the peritoneal space. Additionally, a significant fraction of IAI-ETP-NS-non-CP Enterobacter isolates exhibited ciprofloxacin MIC ≤ 2 mg/L. Conclusion: Based upon the PK/PD analyses, ciprofloxacin, imipenem and cefepime are probably effective against IAI-ETP-NS-non-CPE isolates.
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- 2019
41. Cefiderocol: a promising antibiotic against multidrug-resistant Gram-negative bacteria
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Wen Sen Lee, Shio Shin Jean, Shun Chung Hsueh, and Po-Ren Hsueh
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0301 basic medicine ,Microbiology (medical) ,medicine.drug_class ,030106 microbiology ,Antibiotics ,Cephalosporin ,Biology ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Virology ,Drug Resistance, Multiple, Bacterial ,Gram-Negative Bacteria ,polycyclic compounds ,medicine ,Animals ,Humans ,Multidrug-resistant gram-negative bacteria ,030212 general & internal medicine ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Anti-Bacterial Agents ,Cephalosporins ,Infectious Diseases ,bacteria ,Gram-Negative Bacterial Infections ,Bacteria - Abstract
Spread of drug-resistant Gram-negative bacteria (GNB), including carbapenem-resistant (CR)-Pseudomonas aeruginosa, CR-Acinetobacter baumannii, and particularly the third-generation cephalosporin- a...
- Published
- 2019
42. Pulmonary empyema caused by co-infections of Mycoplasma pneumoniae and Fusobacterium necrophorum: A rare case of lemierre syndrome
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Fang Lan Yu, Tsong Yih Ou, Shio Shin Jean, Fu Lun Chen, and Wen Sen Lee
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0301 basic medicine ,Microbiology (medical) ,Mycoplasma pneumoniae ,030106 microbiology ,ved/biology.organism_classification_rank.species ,lcsh:QR1-502 ,medicine.disease_cause ,Pulmonary Empyema ,lcsh:Microbiology ,Microbiology ,03 medical and health sciences ,Fusobacterium necrophorum ,Rare case ,medicine ,Immunology and Allergy ,Lemierre Syndrome ,General Immunology and Microbiology ,ved/biology ,business.industry ,General Medicine ,medicine.disease ,Empyema ,Pneumonia ,Infectious Diseases ,business ,Co infection - Published
- 2017
43. Susceptibility of clinical isolates of meticillin-resistant Staphylococcus aureus and phenotypic non-extended-spectrum β-lactamase-producing Klebsiella pneumoniae to ceftaroline in Taiwan: Results from Antimicrobial Testing Leadership and Surveillance (ATLAS) in 2012–2018 and Surveillance of Multicentre Antimicrobial Resistance in Taiwan (SMART) in 2018–2019
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Shio-Shin Jean, Wen Chien Ko, and Po-Ren Hsueh
- Subjects
Methicillin-Resistant Staphylococcus aureus ,0301 basic medicine ,Microbiology (medical) ,Klebsiella pneumoniae ,030106 microbiology ,Taiwan ,Microbial Sensitivity Tests ,medicine.disease_cause ,beta-Lactamases ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Antibiotic resistance ,Intensive care ,Drug Resistance, Bacterial ,medicine ,Humans ,Pharmacology (medical) ,030212 general & internal medicine ,Respiratory Tract Infections ,Etest ,biology ,business.industry ,Soft Tissue Infections ,Broth microdilution ,Skin Diseases, Bacterial ,General Medicine ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Antimicrobial ,Anti-Bacterial Agents ,Cephalosporins ,Infectious Diseases ,Staphylococcus aureus ,Vancomycin ,business ,medicine.drug - Abstract
Data on ceftaroline (CPT) susceptibility amongst clinical isolates of meticillin-resistant Staphylococcus aureus (MRSA, n=1284) and phenotypic non-extended-spectrum β-lactamase-producing (non-ESBL-P) Klebsiella pneumoniae (n=466), obtained from the Antimicrobial Testing Leadership and Surveillance (ATLAS) programme from 2012 to 2018, and selected MRSA isolates from patients with bloodstream infections (BSIs) (n=95) from the Surveillance of Multicentre Antimicrobial Resistance in Taiwan (SMART) programme from 2018 to 2019 were analysed. The minimum inhibitory concentrations (MICs) of ATLAS isolates were determined using the broth microdilution method, whereas the MICs of SMART BSI-MRSA isolates were determined using the Etest and MicroScan system. The pharmacokinetic profiles and pharmacodynamic parameters of CPT were applied to explore the optimal dosage against infections caused by Taiwanese MRSA and K. pneumoniae isolates. Approximately 7.1% of ATLAS MRSA isolates were susceptible-dose dependent (S-DD) to CPT, and 19.7% of the non-ESBL-P K. pneumoniae isolates were not susceptible to CPT. Amongst the ATLAS MRSA isolates, the S-DD rates to CPT amongst isolates causing lower respiratory tract infections were 11.9% and 8.5% for isolates from intensive care units (ICUs) and general wards (GWs), and those causing skin and soft tissue infections (SSTIs) were 20% and 5.3% for isolates from ICUs and GWs, respectively (P=0.015). Of the SSTI MRSA isolates from GWs, 22.7% displayed vancomycin MICs >1 mg/L. Amongst 95 SMART BSI MRSA isolates, 28 (46.7%) isolates exhibited lower CPT MICs by the Etest compared with 60 isolates with CPT MICs of 1-2 mg/L by the MicroScan system. CPT 600 mg as a 2-h intravenous infusion every 8 h is suggested for treatment of infections caused by MRSA and phenotypic non-ESBL-P K. pneumoniae in Taiwan.
- Published
- 2020
44. In vitro activity of ceftazidime–avibactam, ceftolozane–tazobactam, and other comparable agents against clinically important Gram-negative bacilli: results from the 2017 Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART)
- Author
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Min-Chi Lu, Ting Shu Wu, Shio Shin Jean, Po-Liang Lu, Wen Chien Ko, Pei Lan Shao, Fu Der Wang, Shu Hui Tseng, Po-Ren Hsueh, and Zhi-Yuan Shi
- Subjects
0301 basic medicine ,Carbapenem ,Klebsiella pneumoniae ,Avibactam ,030106 microbiology ,Ceftazidime ,Tigecycline ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,extended-spectrum β-lactamases ,carbapenemase ,Enterobacteriaceae ,medicine ,polycyclic compounds ,Pharmacology (medical) ,ceftazidime ,ceftolozane-tazobactam ,avibactam ,Original Research ,Pharmacology ,biology ,Broth microdilution ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Ceftazidime/avibactam ,bacterial infections and mycoses ,Neisseria gonorrhoeae ,Infectious Diseases ,chemistry ,Infection and Drug Resistance ,Ertapenem ,medicine.drug - Abstract
Shio-Shin Jean,1,2 Min-Chi Lu,3 Zhi-Yuan Shi,4 Shu-Hui Tseng,5 Ting-Shu Wu,6 Po-Liang Lu,7 Pei-Lan Shao,8 Wen-Chien Ko,9 Fu-Der Wang,10,11 Po-Ren Hsueh12,13 1Department of Emergency Medicine and Emergency and Critical Care Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan; 2Department of Emergency, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan; 3Department of Microbiology and Immunology, School of Medicine, China Medical University, Taichung, Taiwan; 4Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan; 5Center for Disease Control and Prevention, Ministry of Health and Welfare, Taiwan; 6Division of Infectious Diseases, Department of Internal Medicine, Chang Gung Memorial Hospital at Linkou, Chang Gung University College of Medicine, Taoyuan, Taiwan; 7Department of Internal Medicine, Kaohsiung Medical University Hospital, College of Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan; 8Department of Pediatrics, Hsin-Chu Branch, National Taiwan University Hospital, Hsin-Chu, Taiwan; 9Department of Internal Medicine, National Cheng Kung University Medical College and Hospital, Tainan, Taiwan; 10Division of Infectious Diseases, Department of Medicine, Taipei Veterans General Hospital, Taipei, Taiwan; 11School of Medicine, National Yang-Ming University, Taipei, Taiwan; 12Department of Laboratory Medicine, National Taiwan University Hospital, National Taiwan University College of Medicine, Taipei, Taiwan; 13Department of Internal Medicine, National Taiwan University Hospital, National Taiwan University College of Medicine, Taipei, Taiwan Objectives: We investigated the in vitro antimicrobial susceptibilities of clinically important Gram-negative bacteria (GNB) from 16 major teaching hospitals in Taiwan in 2017. Materials and methods: Escherichia coli (n=686) and Klebsiella pneumoniae bloodstream isolates (n=673), non-typhoid Salmonella (NTS; n=221) from various sources, Shigella species (n=21) from fecal samples, and Neisseria gonorrhoeae (n=129) from the genitourinary tract were collected. Antibiotic minimum inhibitory concentrations (MICs) were determined using the broth microdilution method. Alleles encoding K. pneumoniae carbapenemases (KPCs), New Delhi metallo-β-lactamases (NDMs), Verona integron-encoded metallo-β-lactamase, imipenemase, OXA-48-like, and mcr-1-5 genes were detected by molecular methods in Enterobacteriaceae isolates. Results: Five (0.7%) E. coli isolates harbored mcr-1 alleles. Twenty-four (3.6%), seven (1.0%), four (0.6%), and one (0.15%) K. pneumoniae isolates contained bla KPC, bla OXA-48-like, mcr-1, and bla NDM, respectively. Three (1.4%) NTS and no Shigella isolates harbored mcr-1 genes. Seventy-one (10.5%) K. pneumoniae isolates displayed non-susceptibility (NS) to carbapenem agent(s). Phenotypically extended-spectrum β-lactamase (ESBL)-producing K. pneumoniae isolates showed significantly higher rates of ertapenem, tigecycline, and ceftolozane–tazobactam (CLZ–TAZ) NS (40.2%, 16.3%, and 71%–80%, respectively) than E. coli isolates exhibiting ESBL phenotypes (5.4%, 0.7%, and 18%–28%, respectively). All phenotypically ESBL-producing E. coli isolates were ceftazidime–avibactam (CAZ–AVB) susceptible. Two (8.3%) KPC-producing K. pneumoniae isolates showed CAZ–AVB NS. Hospital-acquired K. pneumoniae isolates were significantly less susceptible to ertapenem and CLZ–TAZ than hospital-acquired E. coli isolates. Conclusion: Third-generation cephalosporins remain the optimal choice for treating NTS, Shigella, and gonococcal infections in Taiwan. Hospital-acquired and phenotypically ESBL-producing K. pneumoniae are a heavy resistance burden in Taiwan. Keywords: Enterobacteriaceae, Neisseria gonorrhoeae, extended-spectrum β-lactamases, carbapenemase, ceftolozane–tazobactam, ceftazidime–avibactam
- Published
- 2018
45. Treatment outcomes of patients with non-bacteremic pneumonia caused by extensively drug-resistant Acinetobacter calcoaceticus-Acinetobacter baumannii complex isolates: Is there any benefit of adding tigecycline to aerosolized colistimethate sodium?
- Author
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Shio Shin Jean, Wen Sen Lee, Chin Wan Hsu, Carlos Lam, Tai Chin Hsieh, and Po-Ren Hsueh
- Subjects
0301 basic medicine ,Male ,Minocycline ,Drug resistance ,Tigecycline ,combination therapy ,0302 clinical medicine ,Drug Resistance, Multiple, Bacterial ,030212 general & internal medicine ,Aerosolization ,Aged, 80 and over ,biology ,Acinetobacter ,General Medicine ,Middle Aged ,Acinetobacter baumannii ,Anti-Bacterial Agents ,Survival Rate ,Treatment Outcome ,Drug Therapy, Combination ,Female ,Acinetobacter calcoaceticus ,medicine.drug ,Acinetobacter Infections ,Research Article ,Adult ,030106 microbiology ,Taiwan ,Observational Study ,aerosolized colistimethate sodium ,Microbiology ,03 medical and health sciences ,acinetobacter calcoaceticus-acinetobacter baumannii complex ,Pharmacotherapy ,medicine ,Humans ,pneumonia ,Aged ,Retrospective Studies ,business.industry ,Colistin ,biology.organism_classification ,medicine.disease ,Pneumonia ,Case-Control Studies ,bacteria ,business ,Follow-Up Studies - Abstract
Few therapeutic options exist for various infections caused by extensively drug-resistant Acinetobacter calcoaceticus-Acinetobacter baumannii (XDR-Acb) complex isolates, including pneumonia. This study investigated the clinical efficacy between aerosolized colistimethate sodium (AS-CMS, 2 million units thrice a day) treatment alone or in combination with standard-dose tigecycline (TGC) in patients with non-bacteremic pneumonia due to XDR-Acb, and explored the factors influencing patients’ 30-day mortality. A 1:1 case (n = 106; receiving TGC plus AS-CMS) control (receiving AS-CMS alone with matching scores) observational study was conducted among adult patients with non-bacteremic XDR-Acb complex pneumonia in a Taiwanese medical center from January 2014 through December 2016. The clinically relevant data were retrospectively recorded. The primary endpoint was 30-day case fatality. Secondary endpoints investigated that if the co-morbidities, XDR-A. baumannii as a pneumonic pathogen, therapy-related factors, or airway colonization with colistin-resistant Acb negatively influenced the 14-day clinical condition of enrolled patients. A higher 30-day mortality rate was noted among the group receiving combination therapy (34.0% vs 22.6%; P = .17). The ≥7-day AS-CMS therapy successfully eradicated > 90% of airway XDR-Acb isolates. Nevertheless, follow-up sputum specimens from 10 (6.4% [10/156]) patients were colonized with colistin-resistant Acb isolates. After the conditional factors were adjusted by multivariate logistic analysis, the only factor independently predicting the 30-day case-fatality was the failure of treating XDR-Acb pneumonia at 14 days (adjusted odds ratio [aOR] = 38.2; 95% confidence interval [CI] = 9.96–142.29; P
- Published
- 2018
46. Corrigendum to 'Comparison of the clinical efficacy between tigecycline plus extended-infusion imipenem and sulbactam plus imipenem against ventilator-associated pneumonia with pneumonic extensively drug-resistant Acinetobacter baumannii bacteremia, and correlation of clinical efficacy with in vitro synergy tests' [J Microbiol Immunol Infect (2015) 924–933]
- Author
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Kuan Jen Bai, Tai Chin Hsieh, Carlos Lam, Chin Wan Hsu, Shio Shin Jean, and Wen Sen Lee
- Subjects
0301 basic medicine ,Microbiology (medical) ,Imipenem ,030106 microbiology ,lcsh:QR1-502 ,Drug resistance ,Tigecycline ,lcsh:Microbiology ,Microbiology ,03 medical and health sciences ,Immunology and Microbiology(all) ,medicine ,Immunology and Allergy ,General Immunology and Microbiology ,biology ,business.industry ,Ventilator-associated pneumonia ,General Medicine ,Sulbactam ,medicine.disease ,biology.organism_classification ,In vitro ,Acinetobacter baumannii ,Infectious Diseases ,Bacteremia ,business ,medicine.drug - Published
- 2018
47. Clinical Manifestations and Risk Factors Influencing Eradication of Extensive Multidrug-resistant Acinetobacter baumannii from the Respiratory Tract
- Author
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Wen Sen Lee, Fu Lun Chen, Shio Shin Jean, Giueng Chueng Wang, Tsong Yih Ou, and Tai Chin Hsieh
- Subjects
Mechanical ventilation ,medicine.medical_specialty ,Combination therapy ,biology ,business.industry ,Mortality rate ,medicine.medical_treatment ,macromolecular substances ,General Medicine ,Tigecycline ,medicine.disease ,biology.organism_classification ,Acinetobacter baumannii ,Pneumonia ,medicine.anatomical_structure ,Internal medicine ,medicine ,Colistin ,business ,Intensive care medicine ,Respiratory tract ,medicine.drug - Abstract
Purpose: Extensive multidrug-resistant Acinetobacter baumannii (XDRAB) has increasingly emerged as one of the most difficult bacteria to treat in the healthcare setting. In this study, we intended to evaluate the factors affecting eradicating XDRAB from the respiratory tract, clinical manifestations, and treatment outcomes. Methods: We retrospectively reviewed the medical records of patients who had XDRAB isolated from the respiratory tract in our medical center from January 1, 2012 to February 28, 2013. Results: In total, 87 patients were included in this study. Eradication was achieved in 69 patients (79.3%). The factors that negatively affect eradication of XDRAB by aerosolized colistin therapy for two weeks included: (1) receiving noninvasive mechanical ventilation; (2) being infected/colonized during residency in long-term care facilities; and (3) receiving combination therapy with intravenous tigecycline. The 30-day mortality in patients with versus without eradication was 26.1% versus 55.6%, respectively (p < 0.05), and the in-hospital mortality rate (40.6% vs. 66.7%, p < 0.05), were significantly lower in the eradication group than the noneradication group. Steroid use was associated with significantly higher overall mortality (32% vs. 61%, p < 0.05) in both high and low dose groups. Conclusion: XDRAB eradication from the respiratory tract is associated with improved clinical outcomes. Clinicians should be aware of the possible negative effect of combination therapy with aerosolized colistin and tigecycline for eradicating XDRAB.
- Published
- 2014
48. Community-acquired bacteremic pneumonia due to Pasteurella multocida subspecies multocida in a patient with poor-control diabetes mellitus
- Author
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Fu Lun Chen, Shio Shin Jean, Wen Sen Lee, Cheng Hui Wang, Yi Hsuan Lin, and Tsong Yih Ou
- Subjects
0301 basic medicine ,Microbiology (medical) ,Male ,medicine.medical_specialty ,Pasteurella multocida ,030106 microbiology ,Bacteremia ,Subspecies ,Diabetes Complications ,03 medical and health sciences ,Diabetes mellitus ,Internal medicine ,Diabetes Mellitus ,Immunology and Allergy ,Medicine ,Animals ,Humans ,General Immunology and Microbiology ,biology ,business.industry ,General Medicine ,Pneumonia ,Middle Aged ,medicine.disease ,biology.organism_classification ,Anti-Bacterial Agents ,Community-Acquired Infections ,Infectious Diseases ,Poor control ,Animals, Domestic ,business - Published
- 2017
49. Corrigendum to 'Rates of susceptibility of carbapenems, ceftobiprole, and colistin against clinically important bacteria collected from intensive care units in 2007: Results from the Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART)' [J Microbiol Immunol Infect 49 (2016) 969–976]
- Author
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Po-Ren Hsueh, Chin Wan Hsu, Jien Wei Liu, Carlos Lam, Cheng-Yi Liu, Feng Yi Chang, Chun-Hsing Liao, Shio Shin Jean, Wen Sen Lee, Jiunn Jong Wu, Yen-Hsu Chen, Ray Jade Chen, Wen Chien Ko, Min-Chi Lu, Kwok Woon Yu, and Yao Shen Chen
- Subjects
0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,General Immunology and Microbiology ,biology ,business.industry ,Ceftobiprole ,lcsh:QR1-502 ,General Medicine ,biology.organism_classification ,lcsh:Microbiology ,Microbiology ,03 medical and health sciences ,030104 developmental biology ,Antibiotic resistance ,Infectious Diseases ,Intensive care ,Immunology and Microbiology(all) ,medicine ,Colistin ,Immunology and Allergy ,Intensive care medicine ,business ,Bacteria ,medicine.drug - Published
- 2017
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50. Clinical characteristics of patients with community-acquired complicated intra-abdominal infections: A prospective, multicentre, observational study
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Elmano Ramalheira, Girish Prajapati, Myrna Mendoza, Yang Xie, Pattarachai Kiratisin, Po-Ren Hsueh, Dongmu Zhang, Ana P.aula Castro, Vaishali Pawar, Fernando Rosso, Wen Chien Ko, and Shio Shin Jean
- Subjects
Adult ,Male ,Microbiology (medical) ,Pediatrics ,medicine.medical_specialty ,Cure rate ,Percutaneous ,Adolescent ,Logistic regression ,beta-Lactamases ,Young Adult ,polycyclic compounds ,Humans ,Medicine ,Pharmacology (medical) ,Prospective Studies ,Aged ,Aged, 80 and over ,Adult patients ,business.industry ,Abdominal Infection ,Bacterial Infections ,General Medicine ,Length of Stay ,Middle Aged ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,Anti-Bacterial Agents ,Community-Acquired Infections ,Treatment Outcome ,Infectious Diseases ,Intraabdominal Infections ,bacteria ,Female ,Observational study ,business - Abstract
In this prospective, observational, multicentre study using data from five countries (Columbia, The Philippines, Portugal, Taiwan and Thailand), the clinical impact of extended-spectrum β-lactamase (ESBL)-producing organisms on hospitalised patients with community-acquired complicated intra-abdominal infections (CA-cIAIs) was compared with that of non-ESBL-producing organisms during the period April 2010 to December 2011. Adult patients (aged ≥18 years) requiring surgery or percutaneous drainage were enrolled and were followed during the first hospitalisation course. An unadjusted statistical comparison of risk factors for ESBL-positive and ESBL-negative patients was performed. Multivariate regression analyses were performed to assess whether length of stay (LOS) in hospital, clinical cure rate and some important clinical characteristics were associated with ESBL positivity. During the study period, a total of 105 adult patients from five countries were enrolled, of whom 17 (16.2%) had CA-cIAI due to ESBL-positive organisms and 88 (83.8%) had CA-cIAI due to ESBL-negative organisms. Escherichia coli was isolated in 73.3% of all samples. Infections were cured in 8 (47.1%) of the patients with CA-cIAI due to ESBL-positive organisms and in 59 (67.0%) of the patients with CA-cIAI due to ESBL-negative organisms (P=0.285). The median LOS was 11.6 days for patients with infections due to ESBL-negative organisms and 17.6 days for patients with infections due to ESBL-positive organisms (P=0.011). Multivariate logistic regression analysis revealed that pre-existing co-morbidities, but not ESBL positivity, were adversely associated with clinical cure of CA-cIAIs. In contrast, duration of hospitalisation was longer for patients with CA-cIAI due to ESBL-positive organisms.
- Published
- 2014
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