34 results on '"Shin Hamamoto"'
Search Results
2. Green Tea Catechins, (−)‐Catechin Gallate, and (−)‐Gallocatechin Gallate are Potent Inhibitors of ABA‐Induced Stomatal Closure
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Kanane Sato, Shunya Saito, Kohsuke Endo, Masaru Kono, Taishin Kakei, Haruka Taketa, Megumi Kato, Shin Hamamoto, Matteo Grenzi, Alex Costa, Shintaro Munemasa, Yoshiyuki Murata, Yasuhiro Ishimaru, and Nobuyuki Uozumi
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calcium oscillation ,catechin gallate ,drought stress ,green tea ,stomata ,Science - Abstract
Abstract Stomatal movement is indispensable for plant growth and survival in response to environmental stimuli. Cytosolic Ca2+ elevation plays a crucial role in ABA‐induced stomatal closure during drought stress; however, to what extent the Ca2+ movement across the plasma membrane from the apoplast to the cytosol contributes to this process still needs clarification. Here the authors identify (−)‐catechin gallate (CG) and (−)‐gallocatechin gallate (GCG), components of green tea, as inhibitors of voltage‐dependent K+ channels which regulate K+ fluxes in Arabidopsis thaliana guard cells. In Arabidopsis guard cells CG/GCG prevent ABA‐induced: i) membrane depolarization; ii) activation of Ca2+ permeable cation (ICa) channels; and iii) cytosolic Ca2+ transients. In whole Arabidopsis plants co‐treatment with CG/GCG and ABA suppressed ABA‐induced stomatal closure and surface temperature increase. Similar to ABA, CG/GCG inhibited stomatal closure is elicited by the elicitor peptide, flg22 but has no impact on dark‐induced stomatal closure or light‐ and fusicoccin‐induced stomatal opening, suggesting that the inhibitory effect of CG/GCG is associated with Ca2+‐related signaling pathways. This study further supports the crucial role of ICa channels of the plasma membrane in ABA‐induced stomatal closure. Moreover, CG and GCG represent a new tool for the study of abiotic or biotic stress‐induced signal transduction pathways.
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- 2022
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3. Current Methods to Unravel the Functional Properties of Lysosomal Ion Channels and Transporters
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Margherita Festa, Velia Minicozzi, Anna Boccaccio, Laura Lagostena, Antonella Gradogna, Tianwen Qi, Alex Costa, Nina Larisch, Shin Hamamoto, Emanuela Pedrazzini, Stefan Milenkovic, Joachim Scholz-Starke, Matteo Ceccarelli, Alessandro Vitale, Petra Dietrich, Nobuyuki Uozumi, Franco Gambale, and Armando Carpaneto
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lysosomes ,ion channels ,transporters ,plant vacuole ,patch-clamp ,Cytology ,QH573-671 - Abstract
A distinct set of channels and transporters regulates the ion fluxes across the lysosomal membrane. Malfunctioning of these transport proteins and the resulting ionic imbalance is involved in various human diseases, such as lysosomal storage disorders, cancer, as well as metabolic and neurodegenerative diseases. As a consequence, these proteins have stimulated strong interest for their suitability as possible drug targets. A detailed functional characterization of many lysosomal channels and transporters is lacking, mainly due to technical difficulties in applying the standard patch-clamp technique to these small intracellular compartments. In this review, we focus on current methods used to unravel the functional properties of lysosomal ion channels and transporters, stressing their advantages and disadvantages and evaluating their fields of applicability.
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- 2022
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4. Kup-mediated Cs+ uptake and Kdp-driven K+ uptake coordinate to promote cell growth during excess Cs+ conditions in Escherichia coli
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Ellen Tanudjaja, Naomi Hoshi, Yi-Hsin Su, Shin Hamamoto, and Nobuyuki Uozumi
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Medicine ,Science - Abstract
Abstract The physiological effects of caesium (Cs) on living cells are poorly understood. Here, we examined the physiological role of Cs+ on the activity of the potassium transporters in E. coli. In the absence of potassium (K+), Kup-mediated Cs+ uptake partially supported cell growth, however, at a much lower rate than with sufficient K+. In K+-limited medium (0.1 mM), the presence of Cs+ (up to 25 mM) in the medium enhanced growth as much as control medium containing 1 mM K+. This effect depended on the maintenance of basal levels of intracellular K+ by other K+ uptake transporters. Higher amounts of K+ (1 mM) in the medium eliminated the positive effect of Cs+ on growth, and revealed the inhibitory effect of high Cs+ on the growth of wild-type E. coli. Cells lacking Kdp, TrkG and TrkH but expressing Kup grew less well when Cs+ was increased in the medium. A kdp mutant contained an increased ratio of Cs+/K+ in the presence of high Cs+ in the medium and consequently was strongly inhibited in growth. Taken together, under excess Cs+ conditions Kup-mediated Cs+ influx sustains cell growth, which is supported by intracellular K+ supplied by Kdp.
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- 2017
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5. The mechanosensitive channel YbdG from Escherichia coli has a role in adaptation to osmotic up-shock
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Shin Hamamoto, Hiroshi Kobayashi, Yutaka Nakashimada, Setsu Kato, Kunio Ihara, Mami Kimura, Kiyoto Kamagata, Ryuji Kawabata, Nobuyuki Uozumi, Tadaomi Furuta, Hayato Toyoda, Shun Amemiya, and Hiromi Saito
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0301 basic medicine ,Mutation ,030102 biochemistry & molecular biology ,Osmotic shock ,Osmotic concentration ,Chemistry ,Mutant ,Cell Biology ,medicine.disease_cause ,Biochemistry ,Phenotype ,Transport protein ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,medicine ,Mechanosensitive channels ,Molecular Biology ,Ion channel - Abstract
Mechanosensitive channels play an important role in the adaptation of cells to hypo-osmotic shock. Among members of this channel family in Escherichia coli, the exact function and physiological role of the mechanosensitive channel homolog YbdG remain unclear. Characterization of YbdG's physiological role has been hampered by its lack of measurable transport activity. Using a nitrosoguanidine mutagenesis-aided screen in combination with next-generation sequencing, here we isolated a mutant with a point mutation in ybdG. This mutation (resulting in a I167T change) conferred sensitivity to high osmotic stress, and the mutant cells differed from WT cells in morphology during hyperosmotic stress at alkaline pH. Interestingly, unlike the cells containing the I167T variant, a null-ybdG mutant did not exhibit this sensitivity and phenotype. Although I167T was located near the putative ion-conducting pore in a transmembrane region of YbdG, no change in ion channel activities of YbdG-I167T was detected. Of note, introduction of the WT C-terminal cytosolic region of YbdG into the I167T variant complemented the osmo-sensitive phenotype. Co-precipitation of proteins interacting with the C-terminal YbdG region led to the isolation of HldD and FbaA, whose overexpression in cells containing the YbdG-I167T variant partially rescued the osmo-sensitive phenotype. This study indicates that YbdG functions as a component of a mechanosensing system that transmits signals triggered by external osmotic changes to intracellular factors. The cellular role of YbdG uncovered here goes beyond its predicted function as an ion or solute transport protein.
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- 2019
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6. Cryo-EM structures of thylakoid-located voltage-dependent chloride channel VCCN1
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Tatsuya Hagino, Takafumi Kato, Go Kasuya, Kan Kobayashi, Tsukasa Kusakizako, Shin Hamamoto, Tomoaki Sobajima, Yuichiro Fujiwara, Keitaro Yamashita, Hisashi Kawasaki, Andrés D. Maturana, Tomohiro Nishizawa, and Osamu Nureki
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Multidisciplinary ,Chloride Channels ,Cryoelectron Microscopy ,General Physics and Astronomy ,Animals ,General Chemistry ,Bestrophins ,Photosynthesis ,Thylakoids ,General Biochemistry, Genetics and Molecular Biology - Abstract
In the light reaction of plant photosynthesis, modulation of electron transport chain reactions is important to maintain the efficiency of photosynthesis under a broad range of light intensities. VCCN1 was recently identified as a voltage-gated chloride channel residing in the thylakoid membrane, where it plays a key role in photoreaction tuning to avoid the generation of reactive oxygen species (ROS). Here, we present the cryo-EM structures of Malus domestica VCCN1 (MdVCCN1) in nanodiscs and detergent at 2.7 Å and 3.0 Å resolutions, respectively, and the structure-based electrophysiological analyses. VCCN1 structurally resembles its animal homolog, bestrophin, a Ca2+-gated anion channel. However, unlike bestrophin channels, VCCN1 lacks the Ca2+-binding motif but instead contains an N-terminal charged helix that is anchored to the lipid membrane through an additional amphipathic helix. Electrophysiological experiments demonstrate that these structural elements are essential for the channel activity, thus revealing the distinct activation mechanism of VCCN1.
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- 2021
7. Loss of cell wall integrity genes cpxA and mrcB causes flocculation in Escherichia coli
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Nobuyuki Uozumi, Kunio Ihara, Takaaki Akaike, Hayato Toyoda, Shunsuke Hayasaka, Mamoru Hyodo, Yoshihiro Hayakawa, Hiromi Saito, Eiji Ando, Tomoaki Ida, Keita Sugawara, Shin Hamamoto, Mami Kimura, and Hiroshi Kobayashi
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Flocculation ,Mutant ,medicine.disease_cause ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Cytosol ,Bacterial Proteins ,Cell Wall ,medicine ,Escherichia coli ,Penicillin-Binding Proteins ,Point Mutation ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,030306 microbiology ,Escherichia coli Proteins ,Histidine kinase ,Cell Membrane ,Membrane Proteins ,Cell Biology ,Salt Tolerance ,Serine-Type D-Ala-D-Ala Carboxypeptidase ,Two-component regulatory system ,Cell biology ,chemistry ,Peptidoglycan ,Peptidoglycan Glycosyltransferase ,Cell envelope ,Bacterial outer membrane ,Protein Kinases - Abstract
Flocculation has been recognized for hundreds of years as an important phenomenon in brewing and wastewater treatment. However, the underlying molecular mechanisms remain elusive. The lack of a distinct phenotype to differentiate between slow-growing mutants and floc-forming mutants prevents the isolation of floc-related gene by conventional mutant screening. To overcome this, we performed a two-step Escherichia coli mutant screen. The initial screen of E. coli for mutants conferring floc production during high salt treatment yielded a mutant containing point mutations in 61 genes. The following screen of the corresponding single-gene mutants identified two genes, mrcB, encoding a peptidoglycan-synthesizing enzyme and cpxA, encoding a histidine kinase of a two-component signal transduction system that contributed to salt tolerance and flocculation prevention. Both single mutants formed flocs during high salt shock, these flocs contained cytosolic proteins. ΔcpxA exhibited decreased growth with increasing floc production and addition of magnesium to ΔcpxA suppressed floc production effectively. In contrast, the growth of ΔmrcB was inconsistent under high salt conditions. In both strains, flocculation was accompanied by the release of membrane vesicles containing inner and outer membrane proteins. Of 25 histidine kinase mutants tested, ΔcpxA produced the highest amount of proteins in floc. Expression of cpxP was up-regulated by high salt in ΔcpxA, suggesting that high salinity and activation of CpxR might promote floc formation. The finding that ΔmrcB or ΔcpxA conferred floc production indicates that cell envelope stress triggered by unfavorable environmental conditions cause the initiation of flocculation in E. coli.
- Published
- 2020
8. N-myristoylation andS-acylation are common modifications of Ca2+-regulatedArabidopsiskinases and are required for activation of the SLAC1 anion channel
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Philipp Köster, Shin Hamamoto, Jun Muto, Koko Moriya, Qiuyan Dong, Shunya Saito, Kenji Hashimoto, Nobuyuki Uozumi, Hiroto Noguchi, Toshihiko Utsumi, Aiko Matsuura, Yuzuru Tozawa, Yoko Sato, Katrin Held, Jörg Kudla, Minoru Ueda, and Seiji Yamauchi
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0301 basic medicine ,Physiology ,Chemistry ,S-acylation ,Lipid-anchored protein ,Plant Science ,N-Myristoylation ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,Membrane protein ,Plant protein ,lipids (amino acids, peptides, and proteins) ,Signal transduction ,Lipid modification ,Myristoylation - Abstract
N-myristoylation and S-acylation promote protein membrane association, allowing regulation of membrane proteins. However, how widespread this targeting mechanism is in plant signaling processes remains unknown. Through bioinformatics analyses, we determined that among plant protein kinase families, the occurrence of motifs indicative for dual lipidation by N-myristoylation and S-acylation is restricted to only five kinase families, including the Ca2+ -regulated CDPK-SnRK and CBL protein families. We demonstrated N-myristoylation of CDPK-SnRKs and CBLs by incorporation of radiolabeled myristic acid. We focused on CPK6 and CBL5 as model cases and examined the impact of dual lipidation on their function by fluorescence microscopy, electrophysiology and functional complementation of Arabidopsis mutants. We found that both lipid modifications were required for proper targeting of CBL5 and CPK6 to the plasma membrane. Moreover, we identified CBL5-CIPK11 complexes as phosphorylating and activating the guard cell anion channel SLAC1. SLAC1 activation by CPK6 or CBL5-CIPK11 was strictly dependent on dual lipid modification, and loss of CPK6 lipid modification prevented functional complementation of cpk3 cpk6 guard cell mutant phenotypes. Our findings establish the general importance of dual lipid modification for Ca2+ signaling processes, and demonstrate their requirement for guard cell anion channel regulation.
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- 2018
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9. In vitroandin vivocharacterization of modulation of the vacuolar cation channel<scp>TRPY</scp>1 fromSaccharomyces cerevisiae
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Shin Hamamoto, Nobuyuki Uozumi, Isamu Yabe, and Yasuo Mori
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0301 basic medicine ,Patch-Clamp Techniques ,Saccharomyces cerevisiae Proteins ,Saccharomyces cerevisiae ,Vacuole ,Biochemistry ,03 medical and health sciences ,Transient receptor potential channel ,chemistry.chemical_compound ,Phosphatidylinositol Phosphates ,Osmotic Pressure ,Homeostasis ,Cysteine ,Phosphatidylinositol ,Molecular Biology ,Mercaptoethanol ,TRPC Cation Channels ,biology ,Osmotic concentration ,Chemistry ,Cell Biology ,biology.organism_classification ,Cell biology ,Zinc ,Cytosol ,030104 developmental biology ,Vacuoles ,Calcium ,Ion Channel Gating ,Intracellular ,Biogenesis - Abstract
Saccharomyces cerevisiae possesses a transient receptor potential (TRP) channel homolog TRPY1 in its vacuolar membrane, considered to be an ancestral TRP channel. So far, studies have focused on the channel properties of TRPY1, but its regulation and physiologic role remained to be elucidated. Here, we investigated TRPY1 channel function in vitro and in vivo. Patch-clamp recording of TRPY1 in yeast vacuolar membranes showed that Ca2+ on the lumen side inhibited TRPY1-mediated channel activity, whereas luminal Zn2+ increased the currents. TRPY1 was activated in the presence of a reducing agent, 2-mercaptoethanol. The cysteine at position 624 was identified as the target for this activating action. This activation was independent of the presence of cytosolic Ca2+ . The amplitude of TRPY1-mediated current was reduced by addition of phosphatidylinositol 3-phosphate on the cytosolic side but not by phosphatidylinositol (PI) or phosphatidylinositol 3,5-phosphate. Measurement of the transient Ca2+ increase in response to hyper-osmotic shock in several yeast mutants defective in different steps of the PI phosphate biogenesis pathway supported this interpretation. Addition of a microtubule inhibitor strongly decreased the transient cytosolic Ca2+ increase upon hyper-osmotic shock. Taken together, the data indicate that the vacuolar TRPY1 Ca2+ channel mediates the perception of cytosolic signals that were induced by external changes in osmolarity, and participates in the modulation of cytosolic calcium signaling through Ca2+ release from the vacuole to maintain intracellular Ca2+ homeostasis in yeast.
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- 2018
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10. Evidence for potassium transport activity of Arabidopsis KEA1-KEA6
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Shin Hamamoto, Toshiharu Shikanai, Nobuyuki Uozumi, Masaru Tsujii, Takashi Kuromori, and Kota Kera
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0301 basic medicine ,Plant molecular biology ,Antiporter ,Mutant ,Arabidopsis ,lcsh:Medicine ,Article ,Antiporters ,Potassium channels ,03 medical and health sciences ,Potassium-Hydrogen Antiporters ,0302 clinical medicine ,Arabidopsis thaliana ,Protein Isoforms ,Endomembrane system ,lcsh:Science ,Ion transporter ,Multidisciplinary ,Ion Transport ,biology ,Chemistry ,Arabidopsis Proteins ,lcsh:R ,biology.organism_classification ,Electron transport chain ,030104 developmental biology ,Thylakoid ,Biophysics ,Potassium ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
Arabidopsis thaliana contains the putative K+ efflux transporters KEA1-KEA6, similar to KefB and KefC of Escherichia coli. KEA1-KEA3 are involved in the regulation of photosynthetic electron transport and chloroplast development. KEA4-KEA6 mediate pH regulation of the endomembrane network during salinity stress. However, the ion transport activities of KEA1-KEA6 have not been directly characterized. In this study, we used an E. coli expression system to examine KEA activity. KEA1-KEA3 and KEA5 showed bi-directional K+ transport activity, whereas KEA4 and KEA6 functioned as a K+ uptake system. The thylakoid membrane-localized Na+/H+ antiporter NhaS3 from the model cyanobacterium Synechocystis is the closest homolog of KEA3. Changing the putative Na+/H+ selective site of KEA3 (Gln-Asp) to that of NhaS3 (Asp-Asp) did not alter the ion selectivity without loss of K+ transport activity. The first residue in the conserved motif was not a determinant for K+ or Na+ selectivity. Deletion of the possible nucleotide-binding KTN domain from KEA3 lowered K+ transport activity, indicating that the KTN domain was important for this function. The KEA3-G422R mutation discovered in the Arabidopsis dpgr mutant increased K+ transport activity, consistent with the mutant phenotype. These results indicate that Arabidopsis KEA1-KEA6 act as K+ transport systems, and support the interpretation that KEA3 promotes dissipation of ΔpH in the thylakoid membrane.
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- 2019
11. The mechanosensitive channel YbdG from
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Shun, Amemiya, Hayato, Toyoda, Mami, Kimura, Hiromi, Saito, Hiroshi, Kobayashi, Kunio, Ihara, Kiyoto, Kamagata, Ryuji, Kawabata, Setsu, Kato, Yutaka, Nakashimada, Tadaomi, Furuta, Shin, Hamamoto, and Nobuyuki, Uozumi
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Amino Acid Substitution ,Protein Domains ,Osmotic Pressure ,Escherichia coli Proteins ,Membrane Biology ,Escherichia coli ,Mutation, Missense ,Adaptation, Physiological ,Mechanotransduction, Cellular ,Ion Channels - Abstract
Mechanosensitive channels play an important role in the adaptation of cells to hypo-osmotic shock. Among members of this channel family in Escherichia coli, the exact function and physiological role of the mechanosensitive channel homolog YbdG remain unclear. Characterization of YbdG's physiological role has been hampered by its lack of measurable transport activity. Using a nitrosoguanidine mutagenesis-aided screen in combination with next-generation sequencing, here we isolated a mutant with a point mutation in ybdG. This mutation (resulting in a I167T change) conferred sensitivity to high osmotic stress, and the mutant cells differed from WT cells in morphology during hyperosmotic stress at alkaline pH. Interestingly, unlike the cells containing the I167T variant, a null-ybdG mutant did not exhibit this sensitivity and phenotype. Although I167T was located near the putative ion-conducting pore in a transmembrane region of YbdG, no change in ion channel activities of YbdG-I167T was detected. Of note, introduction of the WT C-terminal cytosolic region of YbdG into the I167T variant complemented the osmo-sensitive phenotype. Co-precipitation of proteins interacting with the C-terminal YbdG region led to the isolation of HldD and FbaA, whose overexpression in cells containing the YbdG-I167T variant partially rescued the osmo-sensitive phenotype. This study indicates that YbdG functions as a component of a mechanosensing system that transmits signals triggered by external osmotic changes to intracellular factors. The cellular role of YbdG uncovered here goes beyond its predicted function as an ion or solute transport protein.
- Published
- 2018
12. Ion Channels Regulate Nyctinastic Leaf Opening in Samanea saman
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Shin Hamamoto, Shintaro Munemasa, Yoshiyuki Mutara, Minoru Ueda, Nobuyuki Yoshikawa, Nobuyuki Uozumi, Takaya Oikawa, Yasuhiro Ishimaru, Kento Washiyama, and Yusuke Takeuchi
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0106 biological sciences ,0301 basic medicine ,Ion flow ,Potassium Channels ,Fabaceae ,Biology ,biology.organism_classification ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Potassium channel ,Circadian Rhythm ,Plant Leaves ,03 medical and health sciences ,Nyctinasty ,030104 developmental biology ,Charles darwin ,Gene Expression Regulation, Plant ,Osmotic Pressure ,Samanea ,Biophysics ,Voltage-Dependent Anion Channels ,General Agricultural and Biological Sciences ,Ion channel ,010606 plant biology & botany ,Plant Proteins - Abstract
The circadian leaf opening and closing (nyctinasty) of Fabaceae has attracted scientists' attention since the era of Charles Darwin. Nyctinastic movement is triggered by the alternate swelling and shrinking of motor cells at the base of the leaf. This, in turn, is facilitated by changing osmotic pressures brought about by ion flow through anion and potassium ion channels. However, key regulatory ion channels and molecular mechanisms remain largely unknown. Here, we identify three key ion channels in mimosoid tree Samanea saman: the slow-type anion channels, SsSLAH1 and SsSLAH3, and the Shaker-type potassium channel, SPORK2. We show that cell-specific circadian expression of SsSLAH1 plays a key role in nyctinastic leaf opening. In addition, SsSLAH1 co-expressed with SsSLAH3 in flexor (abaxial) motor cells promoted leaf opening. We confirm the importance of SLAH1 in leaf movement using SLAH1-impaired Glycine max. Identification of this "master player" advances our molecular understanding of nyctinasty.
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- 2018
13. HKT transporters mediate salt stress resistance in plants: from structure and function to the field
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Ulrich Deinlein, Julian I. Schroeder, Nobuyuki Uozumi, Tomoaki Horie, Felix Hauser, and Shin Hamamoto
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Salinity ,Soil salinity ,Symporters ,biology ,fungi ,Biomedical Engineering ,food and beverages ,Bioengineering ,Transporter ,Plants ,Sodium Chloride ,biology.organism_classification ,Stress resistance ,Plant cell ,Salinity stress ,Structure and function ,Stress, Physiological ,Arabidopsis ,Botany ,Cation Transport Proteins ,Plant Proteins ,Biotechnology - Abstract
Plant cells are sensitive to salinity stress and do not require sodium as an essential element for their growth and development. Saline soils reduce crop yields and limit available land. Research shows that HKT transporters provide a potent mechanism for mediating salt tolerance in plants. Knowledge of the molecular ion transport and regulation mechanisms and the control of HKT gene expression are crucial for understanding the mechanisms by which HKT transporters enhance crop performance under salinity stress. This review focuses on HKT transporters in monocot plants and in Arabidopsis as a dicot plant, as a guide to efforts toward improving salt tolerance of plants for increasing the production of crops and bioenergy feedstocks.
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- 2015
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14. Identification and Characterization of Compounds that Affect Stomatal Movements
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Mami Uchida, Takahiro Yuki, Eri Asai, Ayato Sato, Kohei Fukatsu, Nobuyuki Uozumi, Yosuke Toda, Shinpei Inoue, Saya Aoki, Shigeo Toh, Toshinori Kinoshita, Kyota Suzuki, and Shin Hamamoto
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0106 biological sciences ,0301 basic medicine ,Phototropin ,Light ,Physiology ,Commelina ,Plant Science ,Photosynthesis ,01 natural sciences ,03 medical and health sciences ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Transpiration ,biology ,Chemistry ,fungi ,Autophosphorylation ,food and beverages ,Wilting ,Cell Biology ,General Medicine ,biology.organism_classification ,Commelina benghalensis ,Proton-Translocating ATPases ,030104 developmental biology ,Germination ,Plant Stomata ,Biophysics ,Plant hormone ,010606 plant biology & botany ,Abscisic Acid ,Signal Transduction - Abstract
Regulation of stomatal aperture is essential for plant growth and survival in response to environmental stimuli. Opening of stomata induces uptake of CO2 for photosynthesis and transpiration, which enhances uptake of nutrients from roots. Light is the most important stimulus for stomatal opening. Under drought stress, the plant hormone ABA induces stomatal closure to prevent water loss. However, the molecular mechanisms of stomatal movements are not fully understood. In this study, we screened chemical libraries to identify compounds that affect stomatal movements in Commelina benghalensis and characterize the underlying molecular mechanisms. We identified nine stomatal closing compounds (SCL1-SCL9) that suppress light-induced stomatal opening by >50%, and two compounds (temsirolimus and CP-100356) that induce stomatal opening in the dark. Further investigations revealed that SCL1 and SCL2 had no effect on autophosphorylation of phototropin or the activity of the inward-rectifying plasma membrane (PM) K+ channel, KAT1, but suppressed blue light-induced phosphorylation of the penultimate residue, threonine, in PM H+-ATPase, which is a key enzyme for stomatal opening. SCL1 and SCL2 had no effect on ABA-dependent responses, including seed germination and expression of ABA-induced genes. These results suggest that SCL1 and SCL2 suppress light-induced stomatal opening at least in part by inhibiting blue light-induced activation of PM H+-ATPase, but not by the ABA signaling pathway. Interestingly, spraying leaves onto dicot and monocot plants with SCL1 suppressed wilting of leaves, indicating that inhibition of stomatal opening by these compounds confers tolerance to drought stress in plants.
- Published
- 2018
15. Dimerization of GTR1 regulates their plasma membrane localization
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Minoru Ueda, Shin Hamamoto, Nobuyuki Uozumi, Yasuhiro Ishimaru, Kento Washiyama, and Takaya Oikawa
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0301 basic medicine ,Monosaccharide Transport Proteins ,Xenopus ,Short Communication ,Glucosinolates ,Arabidopsis ,Plant Science ,Dephosphorylation ,Cell membrane ,03 medical and health sciences ,chemistry.chemical_compound ,medicine ,Animals ,Gibberellic acid ,biology ,Arabidopsis Proteins ,Cell Membrane ,Transporter ,biology.organism_classification ,Transmembrane protein ,Gibberellins ,Transport protein ,Protein Transport ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Biochemistry ,Oocytes ,Mutant Proteins ,Protein Multimerization - Abstract
Members of the nitrate transporter 1/peptide transporter family (NPF) are multifunctional transporters of various compounds including plant hormones and play important roles in plant growth and responses to environmental stress. Recently, we found that Arabidopsis GTR1 (also known as NPF2.10) takes up gibberellic acid and jasmonoyl-L-isoleucine in addition to glucosinolates. For normal plant growth, GTR1 is regulated at the gene expression level; however, it is unclear whether post-translational regulation also occurs. Here, we found that dimerization of GTR1, possibly induced by dephosphorylation of the Thr residue located between the possible transmembrane regions, regulates its plasma membrane localization, leading to transport of glucosinolates and gibberellic acid in Xenopus oocytes. These findings suggest that dimerization of multifunctional transporters contributes to their activities at the plasma membrane.
- Published
- 2017
16. Loss of cell wall integrity genes cpxA and mrcB causes flocculation in Escherichia coli.
- Author
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Keita Sugawara, Hayato Toyoda, Mami Kimura, Shunsuke Hayasaka, Hiromi Saito, Hiroshi Kobayashi, Kunio Ihara, Tomoaki Ida, Takaaki Akaike, Eiji Ando, Mamoru Hyodo, Yoshihiro Hayakawa, Shin Hamamoto, and Nobuyuki Uozumi
- Subjects
GENES ,FLOCCULATION ,ESCHERICHIA coli ,MEMBRANE proteins ,WASTEWATER treatment - Abstract
Flocculation has been recognized for hundreds of years as an important phenomenon in brewing and wastewater treatment. However, the underlying molecular mechanisms remain elusive. The lack of a distinct phenotype to differentiate between slow-growing mutants and floc-forming mutants prevents the isolation of floc-related gene by conventional mutant screening. To overcome this, we performed a two-step Escherichia coli mutant screen. The initial screen of E. coli for mutants conferring floc production during high salt treatment yielded a mutant containing point mutations in 61 genes. The following screen of the corresponding single-gene mutants identified two genes, mrcB, encoding a peptidoglycan-synthesizing enzyme and cpxA, encoding a histidine kinase of a two-component signal transduction system that contributed to salt tolerance and flocculation prevention. Both single mutants formed flocs during high salt shock, these flocs contained cytosolic proteins. ΔcpxA exhibited decreased growth with increasing floc production and addition of magnesium to ΔcpxA suppressed floc production effectively. In contrast, the growth of ΔmrcB was inconsistent under high salt conditions. In both strains, flocculation was accompanied by the release of membrane vesicles containing inner and outer membrane proteins. Of 25 histidine kinase mutants tested, ΔcpxA produced the highest amount of proteins in floc. Expression of cpxP was up-regulated by high salt in ΔcpxA, suggesting that high salinity and activation of CpxR might promote floc formation. The finding that ΔmrcB or ΔcpxA conferred floc production indicates that cell envelope stress triggered by unfavorable environmental conditions cause the initiation of flocculation in E. coli. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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17. Molecular Bases of Multimodal Regulation of a Fungal Transient Receptor Potential (TRP) Channel
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Isamu Yabe, Atsuko Yamashita, Makoto Ihara, Nobuyuki Uozumi, Yohei Miyanoiri, Masatsune Kainosho, Mitsuhiro Takeda, and Shin Hamamoto
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Coiled coil ,Membrane potential ,Fungal protein ,Gibberella ,Chemistry ,Cell Biology ,respiratory system ,Crystallography, X-Ray ,Biochemistry ,Protein Structure, Secondary ,Protein Structure, Tertiary ,Fungal Proteins ,TRPC1 ,Structure-Activity Relationship ,Transient receptor potential channel ,TRPC Cation Channels ,Biophysics ,Calcium ,CTD ,human activities ,Molecular Biology ,Ion channel ,Signal Transduction - Abstract
Multimodal activation by various stimuli is a fundamental characteristic of TRP channels. We identified a fungal TRP channel, TRPGz, exhibiting activation by hyperosmolarity, temperature increase, cytosolic Ca2+ elevation, membrane potential, and H2O2 application, and thus it is expected to represent a prototypic multimodal TRP channel. TRPGz possesses a cytosolic C-terminal domain (CTD), primarily composed of intrinsically disordered regions with some regulatory modules, a putative coiled-coil region and a basic residue cluster. The CTD oligomerization mediated by the coiled-coil region is required for the hyperosmotic and temperature increase activations but not for the tetrameric channel formation or other activation modalities. In contrast, the basic cluster is responsible for general channel inhibition, by binding to phosphatidylinositol phosphates. The crystal structure of the presumed coiled-coil region revealed a tetrameric assembly in an offset spiral rather than a canonical coiled-coil. This structure underlies the observed moderate oligomerization affinity enabling the dynamic assembly and disassembly of the CTD during channel functions, which are compatible with the multimodal regulation mediated by each functional module. Background: Multimodality of TRP channels underlies their diverse physiological functions. Results: We identified a fungal multimodal TRP channel whose cytosolic domain (CTD) mediates various channel regulation. Conclusion: CTD has an oligomerization module critical for osmoreception, yet its flexible structure allows dynamic regulations with other functional modalities. Significance: This work proposes structural and biophysical principles for multimodality of a TRP channel family member.
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- 2013
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18. Kup-mediated Cs
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Ellen, Tanudjaja, Naomi, Hoshi, Yi-Hsin, Su, Shin, Hamamoto, and Nobuyuki, Uozumi
- Subjects
Adenosine Triphosphatases ,Ion Transport ,Potassium Channels ,Escherichia coli Proteins ,Escherichia coli ,Potassium ,Cesium ,Membrane Proteins ,ATP-Binding Cassette Transporters ,Cation Transport Proteins ,Article ,Cell Proliferation - Abstract
The physiological effects of caesium (Cs) on living cells are poorly understood. Here, we examined the physiological role of Cs+ on the activity of the potassium transporters in E. coli. In the absence of potassium (K+), Kup-mediated Cs+ uptake partially supported cell growth, however, at a much lower rate than with sufficient K+. In K+-limited medium (0.1 mM), the presence of Cs+ (up to 25 mM) in the medium enhanced growth as much as control medium containing 1 mM K+. This effect depended on the maintenance of basal levels of intracellular K+ by other K+ uptake transporters. Higher amounts of K+ (1 mM) in the medium eliminated the positive effect of Cs+ on growth, and revealed the inhibitory effect of high Cs+ on the growth of wild-type E. coli. Cells lacking Kdp, TrkG and TrkH but expressing Kup grew less well when Cs+ was increased in the medium. A kdp mutant contained an increased ratio of Cs+/K+ in the presence of high Cs+ in the medium and consequently was strongly inhibited in growth. Taken together, under excess Cs+ conditions Kup-mediated Cs+ influx sustains cell growth, which is supported by intracellular K+ supplied by Kdp.
- Published
- 2016
19. GTR1 is a jasmonic acid and jasmonoyl-l-isoleucine transporter in Arabidopsis thaliana
- Author
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Takafumi Shimizu, Syohei Takeishi, Nobuyuki Uozumi, Yasuhiro Ishimaru, Hiroyuki Ohta, Kosaku Takahashi, Hideyuki Matsuura, Mitsunori Seo, Takeshi Suzuki, Minoru Ueda, Shin Hamamoto, and Takaya Oikawa
- Subjects
0106 biological sciences ,0301 basic medicine ,Monosaccharide Transport Proteins ,Arabidopsis ,Chromosomal translocation ,L-Isoleucine ,Cyclopentanes ,Biology ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Wound response ,Gene Expression Regulation, Plant ,Arabidopsis thaliana ,Oxylipins ,Isoleucine ,Molecular Biology ,Gene ,integumentary system ,Arabidopsis Proteins ,Jasmonic acid ,Organic Chemistry ,Transporter ,Biological Transport ,General Medicine ,biology.organism_classification ,Plant Leaves ,Protein Transport ,030104 developmental biology ,chemistry ,Molecular mechanism ,010606 plant biology & botany ,Biotechnology - Abstract
Jasmonates are major plant hormones involved in wounding responses. Systemic wounding responses are induced by an electrical signal derived from damaged leaves. After the signaling, jasmonic acid (JA) and jasmonoyl-l-isoleucine (JA-Ile) are translocated from wounded to undamaged leaves, but the molecular mechanism of the transport remains unclear. Here, we found that a JA-Ile transporter, GTR1, contributed to these translocations in Arabidopsis thaliana. GTR1 was expressed in and surrounding the leaf veins both of wounded and undamaged leaves. Less accumulations and translocation of JA and JA-Ile were observed in undamaged leaves of gtr1 at 30 min after wounding. Expressions of some genes related to wound responses were induced systemically in undamaged leaves of gtr1. These results suggested that GTR1 would be involved in the translocation of JA and JA-Ile in plant and may be contributed to correct positioning of JA and JA-Ile to attenuate an excessive wound response in undamaged leaves.
- Published
- 2016
20. Membrane Motive Force and Membrane Transport System in Plant Cells and Bacteria
- Author
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Kei Nanatani, Yoko Sato, Nobuyuki Uozumi, and Shin Hamamoto
- Subjects
Membrane ,biology ,Chemistry ,Biophysics ,Membrane transport ,Plant cell ,biology.organism_classification ,Bacteria - Published
- 2012
- Full Text
- View/download PDF
21. Roles of tandem-pore K+ channels in plants - a puzzle still to be solved*
- Author
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Shin Hamamoto, Ingo Dreyer, Judith Lucia Gomez-Porras, Camilla Voelker, Katrin Czempinski, Bernd Mueller-Roeber, Nobuyuki Uozumi, Dirk Becker, and Franco Gambale
- Subjects
Future studies ,Tandem ,Plant Science ,General Medicine ,Biology ,biology.organism_classification ,Potassium channel ,Cell biology ,Membrane channel ,Arabidopsis thaliana ,Vacuolar membrane ,Ecology, Evolution, Behavior and Systematics ,Ion channel ,K channels - Abstract
The group of voltage-independent K+ channels in Arabidopsis thaliana consists of six members, five tandem-pore channels (TPK1-TPK5) and a single K-ir-like channel (KCO3). All TPK/KCO channels are located at the vacuolar membrane except for TPK4, which was shown to be a plasma membrane channel in pollen. The vacuolar channels interact with 14-3-3 proteins (also called General Regulating Factors, GRFs), indicating regulation at the level of protein-protein interactions. Here we review current knowledge about these ion channels and their genes, and highlight open questions that need to be urgently addressed in future studies to fully appreciate the physiological functions of these ion channels.
- Published
- 2010
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22. Characterization of a tobacco TPK-type K+ channel as a novel tonoplast K+ channel using yeast tonoplasts
- Author
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Yoichi Nakanishi, Masayoshi Maeshima, Yoshiyuki Murata, Tsuyoshi Nakagawa, Teruo Kuroda, Isamu Yabe, Shin Hamamoto, Kyohei Higashi, Nobuyuki Uozumi, Kazuei Igarashi, Junichiro Marui, Ken Matsuoka, and Yasuo Mori
- Subjects
Patch-Clamp Techniques ,Potassium Channels ,Osmotic shock ,Nicotiana tabacum ,Molecular Sequence Data ,Saccharomyces cerevisiae ,Biochemistry ,Cell membrane ,Gene Expression Regulation, Plant ,Osmotic Pressure ,Tobacco ,Escherichia coli ,medicine ,Homeostasis ,Osmotic pressure ,Amino Acid Sequence ,Patch clamp ,Promoter Regions, Genetic ,Molecular Biology ,Ion transporter ,Plant Proteins ,Ion Transport ,biology ,Cell Membrane ,Sodium ,Cell Biology ,Hydrogen-Ion Concentration ,Membrane transport ,biology.organism_classification ,Recombinant Proteins ,Potassium channel ,medicine.anatomical_structure ,Vacuoles ,Potassium ,Biophysics ,Calcium - Abstract
The tonoplast K(+) membrane transport system plays a crucial role in maintaining K(+) homeostasis in plant cells. Here, we isolated cDNAs encoding a two-pore K(+) channel (NtTPK1) from Nicotiana tabacum cv. SR1 and cultured BY-2 tobacco cells. Two of the four variants of NtTPK1 contained VHG and GHG instead of the GYG signature sequence in the second pore region. All four products were functional when expressed in the Escherichia coli cell membrane, and NtTPK1 was targeted to the tonoplast in tobacco cells. Two of the three promoter sequences isolated from N. tabacum cv. SR1 were active, and expression from these was increased approximately 2-fold by salt stress or high osmotic shock. To determine the properties of NtTPK1, we enlarged mutant yeast cells with inactivated endogenous tonoplast channels and prepared tonoplasts suitable for patch clamp recording allowing the NtTPK1-related channel conductance to be distinguished from the small endogenous currents. NtTPK1 exhibited strong selectivity for K(+) over Na(+). NtTPK1 activity was sensitive to spermidine and spermine, which were shown to be present in tobacco cells. NtTPK1 was active in the absence of Ca(2+), but a cytosolic concentration of 45 microM Ca(2+) resulted in a 2-fold increase in the amplitude of the K(+) current. Acidification of the cytosol to pH 5.5 also markedly increased NtTPK1-mediated K(+) currents. These results show that NtTPK1 is a novel tonoplast K(+) channel belonging to a different group from the previously characterized vacuolar channels SV, FV, and VK.
- Published
- 2008
23. The jasmonate-responsive GTR1 transporter is required for gibberellin-mediated stamen development in Arabidopsis
- Author
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Miyu Kanamori-Sato, Mitsunori Seo, Hiroyuki Ohta, Yuri Kanno, Shinji Masuda, Takaya Oikawa, Jing Chen, Shin Hamamoto, Minoru Ueda, Nobuyuki Uozumi, Tomoya Utsumi, Yasuhiro Ishimaru, Yuko Sasaki-Sekimoto, Yuji Kamiya, and Hikaru Saito
- Subjects
Monosaccharide Transport Proteins ,Arabidopsis ,General Physics and Astronomy ,Strigolactone ,Cyclopentanes ,Flowers ,Article ,General Biochemistry, Genetics and Molecular Biology ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Arabidopsis thaliana ,Oxylipins ,Hormone transport ,Jasmonate ,Abscisic acid ,Multidisciplinary ,biology ,Arabidopsis Proteins ,food and beverages ,General Chemistry ,Anther dehiscence ,biology.organism_classification ,Gibberellins ,chemistry ,Biochemistry ,Gibberellin - Abstract
Plant hormones are transported across cell membranes during various physiological events. Recent identification of abscisic acid and strigolactone transporters suggests that transport of various plant hormones across membranes does not occur by simple diffusion but requires transporter proteins that are strictly regulated during development. Here, we report that a major glucosinolate transporter, GTR1/NPF2.10, is multifunctional and may be involved in hormone transport in Arabidopsis thaliana. When heterologously expressed in oocytes, GTR1 transports jasmonoyl-isoleucine and gibberellin in addition to glucosinolates. gtr1 mutants are severely impaired in filament elongation and anther dehiscence resulting in reduced fertility, but these phenotypes can be rescued by gibberellin treatment. These results suggest that GTR1 may be a multifunctional transporter for the structurally distinct compounds glucosinolates, jasmonoyl-isoleucine and gibberellin, and may positively regulate stamen development by mediating gibberellin supply., GTR1 is known to transport glucosinolates in Arabidopsis. Here, Saito et al. show that GTR1 also transports the plant hormones jasmonate and gibberellin when heterologously expressed in Xenopus oocytes, and that gtr1 mutant plants show a gibberellin-related fertility phenotype.
- Published
- 2015
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24. CAN EXTERNAL BEAM IRRADIATION TO THE NECK PREVENT LATER REGIONAL RELAPSE OF STAGE II TONGUE CANCER?
- Author
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Naonobu Kunitake, Shin Hamamoto, Yukio Akagi, Minoru Fujita, Yutaka Hirokawa, Atsunori Yorozu, Hitoshi Shibuya, Masahiko Oguchi, and Katsuhide Ito
- Subjects
External beam irradiation ,medicine.medical_specialty ,medicine.anatomical_structure ,Tongue ,business.industry ,medicine ,Cancer ,Stage ii ,medicine.disease ,business ,Surgery - Published
- 2001
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- View/download PDF
25. Defining membrane spanning domains and crucial membrane-localized acidic amino acid residues for K⁺ transport of a Kup/HAK/KT-type Escherichia coli potassium transporter
- Author
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Satoshi Souma, Mayumi Tabuchi-Kobayashi, Kei Nanatani, Miho Takahashi, Julian I. Schroeder, Makoto Shimizu, Akifumi Mizutani, Yoko Sato, Nobuyuki Uozumi, and Shin Hamamoto
- Subjects
Molecular Sequence Data ,medicine.disease_cause ,Biochemistry ,Serine ,medicine ,Escherichia coli ,Histidine ,Amino Acid Sequence ,Cysteine ,Molecular Biology ,biology ,Membrane transport protein ,Chemistry ,Escherichia coli Proteins ,Cell Membrane ,Biological Transport ,General Medicine ,Hydrogen-Ion Concentration ,biology.organism_classification ,Transmembrane protein ,Transport protein ,Protein Structure, Tertiary ,Amino Acid Substitution ,Membrane topology ,biology.protein ,Potassium ,Eukaryote - Abstract
Potassium (K(+))-uptake transport proteins present in prokaryote and eukaryote cells are categorized into two classes; Trk/Ktr/HKT, K(+) channel, and Kdp belong to the same superfamily, whereas the remaining K(+)-uptake family, Kup/HAK/KT has no homology to the others, and neither its membrane topology nor crucial residues for K(+) uptake have been identified. We examined the topology of Kup from Escherichia coli. Results from the reporter fusion and cysteine labeling assays support a model with 12 membrane-spanning domains. A model for proton-coupled K(+) uptake mediated by Kup has been proposed. However, this study did not show any stimulation of Kup activity at low pH and any evidence of involvement of the three His in Kup-mediated K(+) uptake. Moreover, replacement of all four cysteines of Kup with serine did not abolish K(+) transport activity. To gain insight on crucial residues of Kup-mediated K(+) uptake activity, we focused on acidic residues in the predicted external and transmembrane regions, and identified four residues in the membrane regions required for K(+) uptake activity. This is different from no membrane-localized acidic residues essential for Trk/Ktr/HKTs, K(+) channels and Kdp. Taken together, these results demonstrate that Kup belongs to a distinct type of K(+) transport system.
- Published
- 2014
26. The phosphoinositide PI(3,5)P-2 mediates activation of mammalian but not plant TPC proteins: functional expression of endolysosomal channels in yeast and plant cells
- Author
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Nina Larisch, Nobuyuki Uozumi, Shin Hamamoto, Petra Dietrich, Paul Vijay Kanth Gutla, Armando Carpaneto, Anna Boccaccio, Margherita Festa, Alex Costa, and Joachim Scholz-Starke
- Subjects
Patch-Clamp Techniques ,Green Fluorescent Proteins ,Yeast vacuole ,Arabidopsis ,Endosomes ,Vacuole ,Ligands ,Lysosome ,Patch clamp ,Plant vacuole ,TPC channels ,Anti-Bacterial Agents ,Arabidopsis Proteins ,Biological Transport ,Calcium ,Calcium Channels ,Cytosol ,Humans ,Lysosomes ,Neomycin ,Phosphatidylinositol Phosphates ,Protein Isoforms ,Verapamil ,Zinc ,Molecular Medicine ,Molecular Biology ,Pharmacology ,Cellular and Molecular Neuroscience ,Cell Biology ,chemistry.chemical_compound ,Lytic vacuole ,Ion channel ,Nicotinic acid adenine dinucleotide phosphate ,biology ,biology.organism_classification ,Fusion protein ,Cell biology ,chemistry ,Second messenger system - Abstract
Two-pore channel proteins (TPC) encode intracellular ion channels in both animals and plants. In mammalian cells, the two isoforms (TPC1 and TPC2) localize to the endo-lysosomal compartment, whereas the plant TPC1 protein is targeted to the membrane surrounding the large lytic vacuole. Although it is well established that plant TPC1 channels activate in a voltage- and calcium-dependent manner in vitro, there is still debate on their activation under physiological conditions. Likewise, the mode of animal TPC activation is heavily disputed between two camps favoring as activator either nicotinic acid adenine dinucleotide phosphate (NAADP) or the phosphoinositide PI(3,5)P-2. Here, we investigated TPC current responses to either of these second messengers by whole-vacuole patch-clamp experiments on isolated vacuoles of Arabidopsis thaliana. After expression in mesophyll protoplasts from Arabidopsis tpc1 knock-out plants, we detected the Arabidopsis TPC1-EGFP and human TPC2-EGFP fusion proteins at the membrane of the large central vacuole. Bath (cytosolic) application of either NAADP or PI(3,5)P-2 did not affect the voltage- and calcium-dependent characteristics of AtTPC1-EGFP. By contrast, PI(3,5)P-2 elicited large sodium currents in hTPC2-EGFP-containing vacuoles, while NAADP had no such effect. Analogous results were obtained when PI(3,5)P-2 was applied to hTPC2 expressed in baker's yeast giant vacuoles. Our results underscore the fundamental differences in the mode of current activation and ion selectivity between animal and plant TPC proteins and corroborate the PI(3,5)P-2-mediated activation and Na+ selectivity of mammalian TPC2.
- Published
- 2014
- Full Text
- View/download PDF
27. The phosphoinositide PI(3,5)P₂ mediates activation of mammalian but not plant TPC proteins: functional expression of endolysosomal channels in yeast and plant cells
- Author
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Anna, Boccaccio, Joachim, Scholz-Starke, Shin, Hamamoto, Nina, Larisch, Margherita, Festa, Paul Vijay Kanth, Gutla, Alex, Costa, Petra, Dietrich, Nobuyuki, Uozumi, and Armando, Carpaneto
- Subjects
Patch-Clamp Techniques ,Arabidopsis Proteins ,Green Fluorescent Proteins ,Arabidopsis ,Biological Transport ,Neomycin ,Endosomes ,Ligands ,Anti-Bacterial Agents ,Zinc ,Cytosol ,Phosphatidylinositol Phosphates ,Verapamil ,Humans ,Protein Isoforms ,Calcium ,Calcium Channels ,Lysosomes - Abstract
Two-pore channel proteins (TPC) encode intracellular ion channels in both animals and plants. In mammalian cells, the two isoforms (TPC1 and TPC2) localize to the endo-lysosomal compartment, whereas the plant TPC1 protein is targeted to the membrane surrounding the large lytic vacuole. Although it is well established that plant TPC1 channels activate in a voltage- and calcium-dependent manner in vitro, there is still debate on their activation under physiological conditions. Likewise, the mode of animal TPC activation is heavily disputed between two camps favoring as activator either nicotinic acid adenine dinucleotide phosphate (NAADP) or the phosphoinositide PI(3,5)P₂. Here, we investigated TPC current responses to either of these second messengers by whole-vacuole patch-clamp experiments on isolated vacuoles of Arabidopsis thaliana. After expression in mesophyll protoplasts from Arabidopsis tpc1 knock-out plants, we detected the Arabidopsis TPC1-EGFP and human TPC2-EGFP fusion proteins at the membrane of the large central vacuole. Bath (cytosolic) application of either NAADP or PI(3,5)P₂ did not affect the voltage- and calcium-dependent characteristics of AtTPC1-EGFP. By contrast, PI(3,5)P₂ elicited large sodium currents in hTPC2-EGFP-containing vacuoles, while NAADP had no such effect. Analogous results were obtained when PI(3,5)P₂ was applied to hTPC2 expressed in baker's yeast giant vacuoles. Our results underscore the fundamental differences in the mode of current activation and ion selectivity between animal and plant TPC proteins and corroborate the PI(3,5)P₂-mediated activation and Na(+) selectivity of mammalian TPC2.
- Published
- 2013
28. Organelle-localized potassium transport systems in plants
- Author
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Nobuyuki Uozumi and Shin Hamamoto
- Subjects
Chloroplasts ,Potassium Channels ,Physiology ,Plant Science ,Vacuole ,Cyanobacteria ,Models, Biological ,Mitochondrial membrane transport protein ,Plant Growth Regulators ,Endomembrane system ,Plant Proteins ,Organelles ,biology ,food and beverages ,Biological Transport ,Plants ,Transport protein ,Cell biology ,Chloroplast ,Membrane protein ,Cytoplasm ,Thylakoid ,Vacuoles ,biology.protein ,Potassium ,Sodium-Potassium-Exchanging ATPase ,Agronomy and Crop Science - Abstract
Some intracellular organelles found in eukaryotes such as plants have arisen through the endocytotic engulfment of prokaryotic cells. This accounts for the presence of plant membrane intrinsic proteins that have homologs in prokaryotic cells. Other organelles, such as those of the endomembrane system, are thought to have evolved through infolding of the plasma membrane. Acquisition of intracellular components (organelles) in the cells supplied additional functions for survival in various natural environments. The organelles are surrounded by biological membranes, which contain membrane-embedded K(+) transport systems allowing K(+) to move across the membrane. K(+) transport systems in plant organelles act coordinately with the plasma membrane intrinsic K(+) transport systems to maintain cytosolic K(+) concentrations. Since it is sometimes difficult to perform direct studies of organellar membrane proteins in plant cells, heterologous expression in yeast and Escherichia coli has been used to elucidate the function of plant vacuole K(+) channels and other membrane transporters. The vacuole is the largest organelle in plant cells; it has an important task in the K(+) homeostasis of the cytoplasm. The initial electrophysiological measurements of K(+) transport have categorized three classes of plant vacuolar cation channels, and since then molecular cloning approaches have led to the isolation of genes for a number of K(+) transport systems. Plants contain chloroplasts, derived from photoautotrophic cyanobacteria. A novel K(+) transport system has been isolated from cyanobacteria, which may add to our understanding of K(+) flux across the thylakoid membrane and the inner membrane of the chloroplast. This chapter will provide an overview of recent findings regarding plant organellar K(+) transport proteins.
- Published
- 2013
29. Characterization of the role of a mechanosensitive channel in osmotic down shock adaptation in Synechocystis sp PCC 6803
- Author
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Toshiaki Shijuku, Yoshinori Yukutake, Nobuyuki Uozumi, Kei Nanatani, Masato Yasui, Shin Hamamoto, Masaro Akai, Megumi Morishita, Masahiro Ishiura, and Kiyoshi Onai
- Subjects
Strain (chemistry) ,biology ,Short Communication ,Synechocystis ,Cell ,Biophysics ,Intracellular Space ,Large-conductance mechanosensitive channel ,Environment ,biology.organism_classification ,Biochemistry ,Adaptation, Physiological ,Ion Channels ,Cell biology ,Circadian Rhythm ,Protein Transport ,medicine.anatomical_structure ,Bacterial Proteins ,Osmotic Pressure ,medicine ,Mechanosensitive channels ,Circadian rhythm ,Gene ,Homeostasis - Abstract
Synechocystis sp strain PCC 6803 contains one gene encoding a putative large conductance mechanosensitive channel homolog [named SyMscL (slr0875)]. However, it is unclear whether SyMscL contributes to the adaptation to hypoosmotic stress in Synechocystis. Here we report the in vivo characteristics of SyMscL. SyMscL was mainly expressed in the plasma membrane of Synechocystis. Cell volume monitoring using stopped-flow spectrophotometry showed that ΔsymscL cells swelled more rapidly than wild-type cells under hypoosmotic stress conditions. Expression of symscL was under circadian control, and its peak corresponded to the beginning of subjective night. These results indicate that SyMscL functioned as one component of the osmotic homeostatic regulatory system of the cell coordinating the response of Synechocystis to daily metabolic osmotic fluctuations and environmental changes.
- Published
- 2013
30. Sodium transport system in plant cells
- Author
-
Nobuyuki Uozumi, Shin Hamamoto, and Toshio Yamaguchi
- Subjects
salt tolerance ,Osmotic shock ,Sodium ,chemistry.chemical_element ,Na+ transporter ,plant ,Transporter ,Plant Science ,lcsh:Plant culture ,Biology ,Plant cell ,Photosynthesis ,SOS1 transporters ,HKT transporters ,Mini Review Article ,Cytosol ,chemistry ,Botany ,Extracellular ,Osmoregulation ,Biophysics ,lcsh:SB1-1110 ,NHX transporters - Abstract
Since sodium, Na, is a non-essential element for the plant growth, the molecular mechanism of Na(+) transport system in plants has remained elusive for the last two decades. The accumulation of Na(+) in soil through irrigation for sustainable agricultural crop production, particularly in arid land, and by changes in environmental and climate conditions leads to the buildup of toxic level of salts in the soil. Since the latter half of the twentieth century, extensive molecular research has identified several classes of Na(+) transporters that play major roles in the alleviation of ionic stress by excluding toxic Na(+) from the cytosol or preventing Na(+) transport to the photosynthetic organs, and also in osmotic stress by modulating intra/extracellular osmotic balance. In this review, we summarize the current knowledge of three major Na(+) transporters, namely NHX, SOS1, and HKT transporters, including recently revealed characteristics of these transporters.
- Published
- 2013
- Full Text
- View/download PDF
31. 12-hydroxyjasmonic acid glucoside is a COI1-JAZ-independent activator of leaf-closing movement in Samanea saman
- Author
-
Kentaro Tohma, Axel Mithöfer, Shin Hamamoto, Nobuyuki Uozumi, Wilhelm Boland, Yoko Nakamura, Erich Kombrink, and Minoru Ueda
- Subjects
Physiology ,Movement ,Plant Science ,Cyclopentanes ,Genes, Plant ,chemistry.chemical_compound ,Glucoside ,Glucosides ,Gene Expression Regulation, Plant ,Arabidopsis ,Membrane Transport Modulators ,Genetics ,Arabidopsis thaliana ,Oxylipins ,Promoter Regions, Genetic ,Plant Proteins ,Volatile Organic Compounds ,biology ,Jasmonic acid ,Protoplasts ,fungi ,Development and Hormone Action ,Plant physiology ,food and beverages ,Coronatine ,Fabaceae ,biology.organism_classification ,Plant Leaves ,Biochemistry ,chemistry ,Samanea ,Phaseolus - Abstract
Jasmonates are ubiquitously occurring plant growth regulators with high structural diversity that mediate numerous developmental processes and stress responses. We have recently identified 12-O-β-d-glucopyranosyljasmonic acid as the bioactive metabolite, leaf-closing factor (LCF), which induced nyctinastic leaf closure of Samanea saman. We demonstrate that leaf closure of isolated Samanea pinnae is induced upon stereospecific recognition of (−)-LCF, but not by its enantiomer, (+)-ent-LCF, and that the nonglucosylated derivative, (−)-12-hydroxyjasmonic acid also displays weak activity. Similarly, rapid and cell type-specific shrinkage of extensor motor cell protoplasts was selectively initiated upon treatment with (−)-LCF, whereas flexor motor cell protoplasts did not respond. In these bioassays related to leaf movement, all other jasmonates tested were inactive, including jasmonic acid (JA) and the potent derivates JA-isoleucine and coronatine. By contrast, (−)-LCF and (−)-12-hydroxyjasmonic acid were completely inactive with respect to activation of typical JA responses, such as induction of JA-responsive genes LOX2 and OPCL1 in Arabidopsis (Arabidopsis thaliana) or accumulation of plant volatile organic compounds in S. saman and lima bean (Phaseolus lunatus), generally considered to be mediated by JA-isoleucine in a COI1-dependent fashion. Furthermore, application of selective inhibitors indicated that leaf movement in S. saman is mediated by rapid potassium fluxes initiated by opening of potassium-permeable channels. Collectively, our data point to the existence of at least two separate JA signaling pathways in S. saman and that 12-O-β-d-glucopyranosyljasmonic acid exerts its leaf-closing activity through a mechanism independent of the COI1-JAZ module.
- Published
- 2011
32. Sodium transport system in plant cells.
- Author
-
Toshio Yamaguchi, Shin Hamamoto, and Nobuyuki Uozumi
- Subjects
PLANT cells & tissues ,SODIUM ,OSMOREGULATION ,SUSTAINABLE agriculture ,SOIL salinity ,CYTOSOL ,PLANTS - Abstract
Since Sodium, Na, is a non-essential element for the plant growth, the molecular mechanism of Na
+ transport system in plants has remained elusive for the last two decades. The accumulation of Na+ in soil through irrigation for sustainable agricultural crop production, particularly in arid land, and by changes in environmental and climate conditions leads to the buildup of toxic level of salts in the soil. Since the latter half of the 20th century, extensive molecular research has identified several classes of Na+ transporters that play major roles in the alleviation of ionic stress by excluding toxic Na+ from the cytosol or preventing Na+ transport to the photosynthetic organs, and also in osmotic stress by modulating intra/extracellular osmotic balance. In this review, we summarize the current knowledge of three major Na+ transporters, namely NHX, SOS1 and HKT transporters, including recently revealed characteristics of these transporters. [ABSTRACT FROM AUTHOR]- Published
- 2013
- Full Text
- View/download PDF
33. The HKT1 Na+ transporter protects plant fertility by decreasing Na+ content in stamen filaments.
- Author
-
Takeshi Uchiyama, Shunya Saito, Taro Yamanashi, Megumi Kato, Kosuke Takebayashi, Shin Hamamoto, Masaru Tsujii, Tomoko Takagi, Noriko Nagata, Hayato Ikeda, Hidetoshi Kikunaga, Toshimi Suda, Sho Toyama, Misako Miwa, Shigeo Matsuyama, Mitsunori Seo, Tomoaki Horie, Takashi Kuromori, Mutsumi Yamagami, and Yasuhiro Ishimaru
- Abstract
The article focuses on the role of the sodium ion transporter AtHKT1;1 in protecting plant fertility under salt stress. It shows that the mutation of AtHKT1;1 leads to male sterility in Arabidopsis plants under high salinity conditions, and restricting the expression of AtHKT1;1 to the phloem increases seed yield in sodium ion stress.
- Published
- 2023
- Full Text
- View/download PDF
34. The mechanosensitive channel YbdG from Escherichia coli has a role in adaptation to osmotic up-shock.
- Author
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Shun Amemiya, Hayato Toyoda, Mami Kimura, Hiroshi Kobayashi, Kunio Ihara, Kiyoto Kamagata, Ryuji Kawabata, Setsu Kato, Yutaka Nakashimada, Tadaomi Furuta, and Shin Hamamoto
- Subjects
- *
ESCHERICHIA coli , *CARRIER proteins , *ION transport (Biology) , *ION channels , *CELL morphology , *OSMOTIC pressure , *CALCIUM channels - Abstract
Mechanosensitive channels play an important role in the adaptation of cells to hypo-osmotic shock. Among members of this channel family in Escherichia coli, the exact function and physiological role of the mechanosensitive channel homolog YbdG remain unclear. Characterization of YbdG's physiological role has been hampered by its lack of measurable transport activity. Using a nitrosoguanidine mutagenesis-aided screen in combination with next-generation sequencing, here we isolated a mutant with a point mutation in ybdG. This mutation (resulting in a I167T change) conferred sensitivity to high osmotic stress, and the mutant cells differed from WT cells in morphology during hyperosmotic stress at alkaline pH. Interestingly, unlike the cells containing the I167T variant, a null-ybdG mutant did not exhibit this sensitivity and phenotype. Although I167T was located near the putative ion-conducting pore in a transmembrane region of YbdG, no change in ion channel activities of YbdG-I167T was detected. Of note, introduction of the WT C-terminal cytosolic region of YbdG into the I167T variant complemented the osmo-sensitive phenotype. Co-precipitation of proteins interacting with the C-terminal YbdG region led to the isolation of HldD and FbaA, whose overexpression in cells containing the YbdG-I167T variant partially rescued the osmo-sensitive phenotype. This study indicates that YbdG functions as a component of a mechanosensing system that transmits signals triggered by external osmotic changes to intracellular factors. The cellular role of YbdG uncovered here goes beyond its predicted function as an ion or solute transport protein. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
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