56 results on '"Shih DT"'
Search Results
2. Therapeutic efficacy of adipose-derived stromal vascular fraction cells is associated with CD34 positivity in acute-on-chronic liver failure.
- Author
-
Ho CM, Chen YH, Ho SL, Chen HY, Chien CS, Chen JC, Hsiao CC, Chen HL, Hu RH, Shih DT, and Lee PH
- Published
- 2019
- Full Text
- View/download PDF
3. Antifibrotic Activity of Human Placental Amnion Membrane-Derived CD34+ Mesenchymal Stem/Progenitor Cell Transplantation in Mice With Thioacetamide-Induced Liver Injury.
- Author
-
Lee PH, Tu CT, Hsiao CC, Tsai MS, Ho CM, Cheng NC, Hung TM, and Shih DT
- Abstract
: Liver fibrosis represents the end stage of chronic liver inflammatory diseases and is defined by the abnormal accumulation of extracellular matrix in the liver. Advanced liver fibrosis results in cirrhosis, liver failure, and portal hypertension. Liver transplantation has been the most effective treatment for these diseases, but the procedure is limited by the shortage of suitable donors. Mesenchymal stromal cells (MSCs) have shown great potential in the treatment of chronic inflammatory diseases associated with fibrosis. This study aimed to evaluate the therapeutic effect of MSC-based cell transplantation as an alternative treatment for liver fibrosis. A CD34-positive subpopulation of human placental amnion membrane-derived stem/progenitor cells (CD34
+ AMSPCs) was isolated through the depletion of CD34-negative stromal fibroblasts (CD34- AMSFCs) facilitated by CD34 fluorescence-activated cell sorting, enriched and expanded ex vivo. These cells express pluripotency markers and demonstrate multidirectional differentiation potentials. Comparative analysis was made between CD34+ AMSPCs and CD34- AMSFCs in terms of the expressions of stemness surface markers, embryonic surface antigens, and multilineage differentiation potentials. A mouse model of liver fibrosis was established by thioacetamide (TAA) administration. When injected into the spleen of TAA-injured mice, human placental amnion membrane-derived MSCs (hAM-MSCs) can engraft into the injury site, ameliorate liver fibrosis, and restore liver function, as shown by pathological and blood biochemical analysis and downregulated gene expressions associated with liver damage. CD34+ AMSPCs represent a more primitive subset of hAM-MSCs and could be a suitable candidate with a potentially better safety profile for cell-based therapy in treatment of liver diseases associated with fibrosis., Significance: In this study, a CD34+ subpopulation of stem/progenitor cells derived from neonatal placental amnion membrane, denoted as CD34+ AMSPCs, were identified, enriched, and characterized. These cells are highly proliferative, express mesenchymal stromal cells and pluripotent stem cell markers, and demonstrate multidirectional differentiation potentials, indicating their promising application in clinical regenerative therapies. CD34+ AMSPC transplantation ameliorated liver fibrosis in mice with drug-induced liver injury. These cells represent a potential therapeutic agent for treating liver diseases associated with fibrosis., (©AlphaMed Press.)- Published
- 2016
- Full Text
- View/download PDF
4. Gene methylation of human ovarian carcinoma stromal progenitor cells promotes tumorigenesis.
- Author
-
Ho CM, Shih DT, Hsiao CC, Huang SH, Chang SF, and Cheng WF
- Subjects
- Animals, Biomarkers, Tumor metabolism, Cell Differentiation, Cell Lineage, Epithelial-Mesenchymal Transition, Female, Gene Expression Profiling, Humans, Mice, Mice, Inbred NOD, Mice, SCID, Ovarian Neoplasms metabolism, Ovarian Neoplasms pathology, Carcinogenesis, DNA Methylation, Ovarian Neoplasms genetics, Stromal Cells pathology
- Abstract
Background: This study aimed to investigate whether the DNA methylation of human ovarian carcinoma stromal progenitor cells (OCSPCs) could promote the tumorigenesis of ovarian carcinoma., Methods: OCSPCs were first isolated from fresh tumor tissues and ascites of ovarian cancer patients. In vivo and in vitro experiments on the effect of the OCSPCs on tumorigenesis and the effects of DNA demethylation on the OCSPCs were then performed., Results: The OCSPCs possessed self-renewal and multipotent differentiation capacity with elevated expressions of OCT4, NANOG, BMP2, BMP4, Rex-1, AC133 and TGF-β. The OCSPCs, when combined with tumor cells in vivo could promote tumor growth. The methylation profiles of tumor suppressor genes (TSGs) were significantly higher in the OCSPCs than in ovarian cancer cells (p < 0.001). 5-aza-2-dC could alter the methylation levels of TSGs in OCSPCs and also inhibit the tumor promoting capabilities of the OCSPCs by decreasing the proliferation of tumors cells. The expression levels of TSGs were re-expressed by 5-aza-2-dC to inhibit the self-renewal and growth of OCSPCs., Conclusions: OCSPCs with decreased TSG expressions in the ovarian tumor microenvironment were able to promote tumorigenesis which could be reversed by DNA demethylation. DNA demethylation reversing the expression of TSGs in OCSPCs may represent a potential therapeutic target for ovarian cancer.
- Published
- 2015
- Full Text
- View/download PDF
5. Preparation, quality criteria, and properties of human blood platelet lysate supplements for ex vivo stem cell expansion.
- Author
-
Shih DT and Burnouf T
- Subjects
- Blood Platelets drug effects, Cell Proliferation, Culture Media, Serum-Free, Humans, Platelet-Derived Growth Factor pharmacology, Blood Platelets cytology, Cell Culture Techniques methods, Cell Culture Techniques standards, Stem Cells cytology
- Abstract
Most clinical applications of human multipotent mesenchymal stromal cells (MSCs) for cell therapy, tissue engineering, regenerative medicine, and treatment of immune and inflammatory diseases require a phase of isolation and ex vivo expansion allowing a clinically meaningful cell number to be reached. Conditions used for cell isolation and expansion should meet strict quality and safety requirements. This is particularly true for the growth medium used for MSC isolation and expansion. Basal growth media used for MSC expansion are supplemented with multiple nutrients and growth factors. Fetal bovine serum (FBS) has long been the gold standard medium supplement for laboratory-scale MSC culture. However, FBS has a poorly characterized composition and poses risk factors, as it may be a source of xenogenic antigens and zoonotic infections. FBS has therefore become undesirable as a growth medium supplement for isolating and expanding MSCs for human therapy protocols. In recent years, human blood materials, and most particularly lysates and releasates of platelet concentrates have emerged as efficient medium supplements for isolating and expanding MSCs from various origins. This review analyzes the advantages and limits of using human platelet materials as medium supplements for MSC isolation and expansion. We present the modes of production of allogeneic and autologous platelet concentrates, measures taken to ensure optimal pathogen safety profiles, and methods of preparing PLs for MSC expansion. We also discuss the supply of such blood preparations. Produced under optimal conditions of standardization and safety, human platelet materials can become the future 'gold standard' supplement for ex vivo production of MSCs for translational medicine and cell therapy applications., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
6. Exploration of cathepsin S inhibitors characterized by a triazole P1-P2 amide replacement.
- Author
-
Moss N, Xiong Z, Burke M, Cogan D, Gao DA, Haverty K, Heim-Riether A, Hickey ER, Nagaraja R, Netherton M, O'Shea K, Ramsden P, Schwartz R, Shih DT, Ward Y, Young E, and Zhang Q
- Subjects
- Cathepsins metabolism, Half-Life, Humans, Microsomes, Liver metabolism, Protease Inhibitors chemical synthesis, Protease Inhibitors pharmacokinetics, Protein Binding, Structure-Activity Relationship, Thiophenes chemical synthesis, Thiophenes pharmacokinetics, Triazoles chemical synthesis, Triazoles pharmacokinetics, Amides chemistry, Cathepsins antagonists & inhibitors, Protease Inhibitors chemistry, Thiophenes chemistry, Triazoles chemistry
- Abstract
This paper details exploration of a class of triazole-based cathepsin S inhibitors originally reported by Ellman and co-workers. SAR studies involving modifications across the whole inhibitor provide a perspective on the strengths and weaknesses of this class of inhibitors. In addition, we put the unique characteristics of this class of compounds into perspective with other classes of cathepsin S inhibitors., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
7. Isolation and characterization of stromal progenitor cells from ascites of patients with epithelial ovarian adenocarcinoma.
- Author
-
Ho CM, Chang SF, Hsiao CC, Chien TY, and Shih DT
- Subjects
- Adenocarcinoma metabolism, Adult, Aged, Aged, 80 and over, Ascites metabolism, Ascitic Fluid metabolism, Ascitic Fluid pathology, Carcinoma, Ovarian Epithelial, Cell Differentiation, Cell Proliferation, Epithelial Cells metabolism, Epithelial Cells pathology, Epithelial-Mesenchymal Transition, Female, Flow Cytometry, Humans, Immunohistochemistry, Mesenchymal Stem Cells metabolism, Mesenchymal Stem Cells pathology, Middle Aged, Neoplasms, Glandular and Epithelial metabolism, Ovarian Neoplasms metabolism, Stromal Cells metabolism, Stromal Cells pathology, Tumor Cells, Cultured, Adenocarcinoma pathology, Adult Stem Cells pathology, Ascites pathology, Neoplasms, Glandular and Epithelial pathology, Ovarian Neoplasms pathology
- Abstract
Background: At least one-third of epithelial ovarian cancers are associated with the development of ascites containing heterogeneous cell populations, including tumor cells, inflammatory cells, and stromal elements. The components of ascites and their effects on the tumor cell microenvironment remain poorly understood. This study aimed to isolate and characterize stromal progenitor cells from the ascites of patients with epithelial ovarian adenocarcinoma (EOA)., Methods: Seventeen ascitic fluid samples and 7 fresh tissue samples were collected from 16 patients with EOA. The ascites samples were then cultured in vitro in varying conditions. Flow cytometry and immunocytochemistry were used to isolate and characterize 2 cell populations with different morphologies (epithelial type and mesenchymal type) deriving from the ascites samples. The in vitro cell culture model was established using conditional culture medium., Results: The doubling times of the epithelial type and mesenchymal type cells were 36 h and 48 h, respectively, indicating faster growth of the epithelial type cells compared to the mesenchymal type cells. Cultured in vitro, these ascitic cells displayed the potential for self-renewal and long-term proliferation, and expressed the typical cancer stem/progenitor cell markers CD44(high), CD24(low), and AC133(+). These cells also demonstrated high BMP-2, BMP4, TGF-β, Rex-1, and AC133 early gene expression, and expressed EGFR, integrin α2β1, CD146, and Flt-4, which are highly associated with tumorigenesis and metastasis. The epithelial type cells demonstrated higher cytokeratin 18 and E-cadherin expression than the mesenchymal type cells. The mesenchymal type cells, in contrast, demonstrated higher AC133, CD73, CD105, CD117, EGFR, integrin α2β1, and CD146 surface marker expression than the epithelial type cells., Conclusion: The established culture system provides an in vitro model for the selection of drugs that target cancer-associated stromal progenitor cells, and for the development of ovarian cancer treatments.
- Published
- 2012
- Full Text
- View/download PDF
8. Downregulation of alpha-fetoprotein expression by LHX4: a critical role in hepatocarcinogenesis.
- Author
-
Hung TM, Hu RH, Ho CM, Chiu YL, Lee JL, Jeng YM, Shih DT, and Lee PH
- Subjects
- Aged, Blotting, Western, Female, Humans, Immunohistochemistry, Male, Middle Aged, Reverse Transcriptase Polymerase Chain Reaction, Cell Transformation, Neoplastic, Down-Regulation physiology, LIM-Homeodomain Proteins physiology, Liver Neoplasms physiopathology, Transcription Factors physiology, alpha-Fetoproteins metabolism
- Abstract
LHX4 is a member of the LIM-homeobox family and plays a critical role in pituitary development and differentiation. Several lines of evidences have reported their aberrant expression in cancers. However, the exact roles of LHX4 in carcinogenesis remain unclear. In this study, LHX4 expression was analyzed in tumor and paired non-tumor tissues obtained from patients with hepatocellular carcinoma (HCC) using western blotting and immunohistochemistry. LHX4 was found to be downregulated in tumor tissues and negatively correlated with differentiation grade and alpha-fetoprotein (AFP) levels in 66 HCC patients. To clarify the biological functions of LHX4, transient or stable transfectants overexpressing LHX4 were generated in human hepatoma cells (Huh7 and HepG2). LHX4 overexpression in Huh7 and HepG2 cells induced a more differentiated phenotype by reducing AFP expression. Using in silico analysis, the evolutionary conserved region within the AFP promoter containing LHX4-binding site was identified, implying that AFP is a putative target for LHX4. Moreover, ectopic LHX4 overexpression attenuated Huh7 and HepG2 proliferation. Importantly, the growth-inhibitory effect of LHX4 was reversed by replenishing AFP to the LHX4-overexpressing cells, providing a functional relevance between LHX4 and AFP. Finally, we analyzed expressions of LHX4 and AFP during normal liver development. Hepatic LHX4 expression increased in adult liver in a manner that parallel AFP repression. In conclusion, these data indicate that LHX4 may act as a potential tumor suppressor in hepatocarcinogenesis, suggesting that targeting LHX4 to downregulate AFP might have therapeutic implications.
- Published
- 2011
- Full Text
- View/download PDF
9. Aryl 1,4-diazepane compounds as potent and selective CB2 agonists: optimization of drug-like properties and target independent parameters.
- Author
-
Zindell R, Walker ER, Scott J, Amouzegh P, Wu L, Ermann M, Thomson D, Fisher MB, Fullenwider CL, Grbic H, Kaplita P, Linehan B, Patel M, Patel M, Löbbe S, Block S, Albrecht C, Gemkow MJ, Shih DT, and Riether D
- Subjects
- Azepines pharmacology, Caco-2 Cells, Cell Membrane Permeability, High-Throughput Screening Assays, Humans, Microsomes, Liver metabolism, Receptor, Cannabinoid, CB1 agonists, Receptor, Cannabinoid, CB1 metabolism, Receptor, Cannabinoid, CB2 metabolism, Solubility, Structure-Activity Relationship, Azepines chemistry, Receptor, Cannabinoid, CB2 agonists
- Abstract
A high throughput screening campaign identified aryl 1,4-diazepane compounds as potent and selective cannabinoid receptor 2 agonists as compared to cannabinoid receptor 1. This class of compounds suffered from poor drug-like parameters as well as low microsomal stability and poor solubility. Structure-activity relationships are described with a focus on improving the drug-like parameters resulting in compounds with improved solubility and permeability., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
10. 1,4-Diazepane compounds as potent and selective CB2 agonists: optimization of metabolic stability.
- Author
-
Riether D, Wu L, Cirillo PF, Berry A, Walker ER, Ermann M, Noya-Marino B, Jenkins JE, Albaugh D, Albrecht C, Fisher M, Gemkow MJ, Grbic H, Löbbe S, Möller C, O'Shea K, Sauer A, Shih DT, and Thomson DS
- Subjects
- Animals, Azepines chemistry, Microsomes, Liver metabolism, Rats, Rats, Wistar, Azepines pharmacology, Receptor, Cannabinoid, CB2 agonists
- Abstract
A high-throughput screening campaign has identified 1,4-diazepane compounds which are potent Cannabinoid receptor 2 agonists with excellent selectivity against the Cannabinoid receptor 1. This class of compounds suffered from low metabolic stability. Following various strategies, compounds with a good stability in liver microsomes and rat PK profile have been identified., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
11. Expansion of adipose tissue mesenchymal stromal progenitors in serum-free medium supplemented with virally inactivated allogeneic human platelet lysate.
- Author
-
Shih DT, Chen JC, Chen WY, Kuo YP, Su CY, and Burnouf T
- Subjects
- Animals, Cattle, Cell Differentiation drug effects, Cell Proliferation drug effects, Cells, Cultured, Flow Cytometry, Humans, Immunophenotyping, Mesenchymal Stem Cells drug effects, Stromal Cells drug effects, Adipose Tissue cytology, Blood Platelets chemistry, Culture Media, Serum-Free pharmacology, Mesenchymal Stem Cells cytology, Stromal Cells cytology
- Abstract
Background: Single-donor or pooled platelet lysates (PL) can substitute for fetal bovine serum (FBS) for mesenchymal stromal cell (MSC) expansion. However, for clinical applications of MSCs, the use of virally inactivated PL would be desirable. Recently, we have developed a solvent/detergent (S/D)-treated human PL preparation (S/D-PL) rich in growth factors. The capacity to use this virally inactivated preparation for MSC expansion needs to be evaluated., Study Design and Methods: Platelet concentrates were treated by S/D (1% tri-n-butyl phosphate and 1% Triton X-45), extracted by oil, purified by C18 hydrophobic interaction chromatography, and sterile filtered. S/D-PL was compared to FBS as a medium supplement (10% vol/vol) for isolating, maintaining, and expanding adipose tissue-derived MSCs (AT-MSCs). Cell morphology; proliferation kinetics; immunophenotype; differentiation capacity toward the chondrogenic, osteogenic, and osteogenic lineages; and cytokine antibody array were assessed., Results: AT-MSCs had a typical spindle morphology and proliferated in S/D-PL at least as well as in FBS. Immunophenotype at Passage 7 was characteristic of MSCs and similar for both culture conditions. Differentiation capacity into the three lineages was maintained and chondrogenesis was enhanced by S/D-PL. In a 120 human cytokine antibody array analysis, 73 cytokines were detected in S/D-PL, including 22 with a concentration higher than in FBS., Conclusion: S/D-PL is an alternative to FBS for AT-MSC maintenance and expansion, does not compromise the differentiation capacity nor the immunophenotype, and may accelerate chondrogenesis. S/D-PL protocols for MSC clinical scale-up may represent a major step toward challenging new use in stem cell therapies., (© 2010 American Association of Blood Banks.)
- Published
- 2011
- Full Text
- View/download PDF
12. Effect of Reishi polysaccharides on human stem/progenitor cells.
- Author
-
Chen WY, Yang WB, Wong CH, and Shih DT
- Subjects
- Adipose Tissue cytology, Cell Adhesion drug effects, Cell Adhesion Molecules genetics, Cytokines genetics, Gene Expression Regulation drug effects, Humans, Hematopoietic Stem Cells drug effects, Polysaccharides pharmacology, Reishi chemistry
- Abstract
The polysaccharide fraction of Ganoderma lucidum (F3) was found to benefit our health in many ways by influencing the activity of tissue stem/progenitor cells. In this study, F3 was found to promote the adipose tissue MSCs' aggregation and chondrosphere formation, with the increase of CAM (N-CAM, I-CAM) expressions and autokine (BMP-2, IL-11, and aggrecan) secretions, in an in vitro chondrogenesis assay. In a stem cell expansion culture, it possesses the thrombopoietin (TPO) and GM-CSF like functions to enhance the survival/renewal abilities of primitive hematopoietic stem/progenitor cells (HSCs). F3 was found to promote the dendrite growth of blood mononuclear cells (MNCs) and the expression of cell adhesion molecules in the formation of immature dendritic cells (DC). On the other hand, F3 exhibited inhibitory effects on blood endothelial progenitor (EPC) colony formation, with concomitant reduction of cell surface endoglin (CD105) and vascular endothelial growth factor receptor-3 (VEGFR-3) marker expressions, in the presence of angiogenic factors. A further cytokine array analysis revealed that F3 indeed inhibited the angiogenin synthesis and enhanced IL-1, MCP-1, MIP-1, RANTES, and GRO productions in the blood EPC derivation culture. Collectively, we have demonstrated that the polysaccharide fraction of G. lucidum F3 exhibits cytokine and chemokine like functions which are beneficial to human tissue stem/progenitor cells by modulating their CAM expressions and biological activities. These findings provide us a better the observation that F3 glycopolysaccharides indeed possesses anti-angiogenic and immune-modulating functions and promotes hematopoietic stem/progenitor cell homing for better human tissue protection, reducing disease progression and health., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2010
- Full Text
- View/download PDF
13. Morpholine containing CB2 selective agonists.
- Author
-
Zindell R, Riether D, Bosanac T, Berry A, Gemkow MJ, Ebneth A, Löbbe S, Raymond EL, Thome D, Shih DT, and Thomson D
- Subjects
- Analgesics chemical synthesis, Analgesics pharmacology, Animals, Anti-Inflammatory Agents pharmacology, Cell Line, Chemistry, Pharmaceutical methods, Drug Design, Humans, Inflammation, Mice, Models, Chemical, Molecular Structure, Morpholines pharmacology, Receptor, Cannabinoid, CB2 chemistry, Stereoisomerism, Morpholines chemical synthesis, Receptor, Cannabinoid, CB2 agonists
- Abstract
Identification and optimization of two classes of CB2 selective agonists are described. A representative from each class is profiled in a murine model of inflammation and each shows similar efficacy to prednisolone upon oral dosing.
- Published
- 2009
- Full Text
- View/download PDF
14. Arylsulfonamide CB2 receptor agonists: SAR and optimization of CB2 selectivity.
- Author
-
Ermann M, Riether D, Walker ER, Mushi IF, Jenkins JE, Noya-Marino B, Brewer ML, Taylor MG, Amouzegh P, East SP, Dymock BW, Gemkow MJ, Kahrs AF, Ebneth A, Löbbe S, O'Shea K, Shih DT, and Thomson D
- Subjects
- Molecular Structure, Receptor, Cannabinoid, CB1 agonists, Structure-Activity Relationship, Receptor, Cannabinoid, CB2 agonists
- Abstract
A high-throughput screening campaign resulted in the discovery of a highly potent dual cannabinoid receptor 1 (CB1) and 2 (CB2) agonist. Following a thorough SAR exploration, a series of selective CB2 full agonists were identified.
- Published
- 2008
- Full Text
- View/download PDF
15. Disparate mesenchyme-lineage tendencies in mesenchymal stem cells from human bone marrow and umbilical cord blood.
- Author
-
Chang YJ, Shih DT, Tseng CP, Hsieh TB, Lee DC, and Hwang SM
- Subjects
- Adipogenesis drug effects, Adipogenesis physiology, Bone Marrow Cells cytology, Cell Differentiation drug effects, Cells, Cultured, Core Binding Factor Alpha 1 Subunit biosynthesis, Fetal Blood cytology, Gene Expression Regulation drug effects, Gene Expression Regulation physiology, Humans, Leptin metabolism, Leptin pharmacology, Mesenchymal Stem Cells cytology, Osteogenesis drug effects, Osteogenesis physiology, PPAR gamma biosynthesis, Bone Marrow Cells physiology, Cell Differentiation physiology, Fetal Blood physiology, Mesenchymal Stem Cells physiology
- Abstract
Bone marrow and umbilical cord blood are reported to be the main sources of mesenchymal stem cells (MSCs), which have been proposed for many clinical applications. This study evaluated and quantitated the differentiation potential of bone marrow-derived MSCs (bmMSCs) and cord blood-derived MSCs (cbMSCs) by in vitro induction. Results indicated that cbMSCs had a significantly stronger osteogenic potential but lower capacity for adipogenic differentiation than bmMSCs. Leptin, an important regulator of mesenchymal differentiation, has a significantly stronger effect of promoting osteogenesis and inhibiting adipogenesis in bmMSCs than in cbMSCs. Moreover, Cbfa1 mRNA expression in bmMSCs and cbMSCs was affected to different degrees by leptin during osteogenesis. In contrast, leptin reduced PPARgamma2 mRNA expression to the same level during adipogenesis in both types of MSCs. These results demonstrate the disparate capacities of MSCs from bone marrow and cord blood and suggest that they be used differently in experimental and therapeutic studies. In addition, the disparate differentiation tendencies of MSCs from different sources should be considered in further applications.
- Published
- 2006
- Full Text
- View/download PDF
16. Mesenchymal stem cells are superior to angiogenic growth factor genes for improving myocardial performance in the mouse model of acute myocardial infarction.
- Author
-
Shyu KG, Wang BW, Hung HF, Chang CC, and Shih DT
- Subjects
- Animals, Disease Models, Animal, Humans, Immunophenotyping, Male, Mesenchymal Stem Cells cytology, Mice, Mice, SCID, Myocardial Infarction metabolism, Myocardial Infarction pathology, Myocardium cytology, Neovascularization, Physiologic, Ventricular Function, Left, Angiopoietin-1 genetics, Mesenchymal Stem Cell Transplantation, Mesenchymal Stem Cells physiology, Myocardial Infarction therapy, Myocardium metabolism, Vascular Endothelial Growth Factor A genetics
- Abstract
Both cell therapy and angiogenic growth factor gene therapy have been applied to animal studies and clinical trials. Little is known about the direct comparison between cell therapy and angiogenic growth factor gene therapy. The goal of this study was to compare the effects of human bone marrow-derived mesenchymal stem cells (hMSCs) transplantation and injection of angiogenic growth factor genes in a model of acute myocardial infarction in mice. The hMSCs were obtained from adult human bone marrow and expanded in vitro. The purity and characteristics of hMSCs were identified by flow cytometry and immunophenotyping. Immediately after ligation of the left anterior descending coronary artery in male severe combined immunodeficient (SCID) mice, culture-expanded hMSCs or angiogenic growth factor genes were injected intramuscularly at the left anterior free wall. The engrafted hMSCs were positive for cardiac marker, desmin. Infarct size was significantly smaller in the hMSCs-treated group than in the angiopoietin-1 (Ang-1) or vascular endothelial growth factor (VEGF)-treated group at day 28 after infarction. hMSCs transplantation was better in decreasing left ventricular end-diastolic dimension and increasing fractional shortening than Ang1 or VEGF gene therapy. Capillary density was markedly increased after hMSCs transplantation than Ang1 and VEGF gene therapy. In conclusion, intramyocardial transplantation of hMSCs improves cardiac function after acute myocardial infarction through enhancement of angiogenesis and myogenesis in the ischemic myocardium. hMSCs are superior to angiogenic growth factor genes for improving myocardial performance in the mouse model of acute myocardial infarction. Transplantation of MSCs may become the future therapy for acute myocardial infarction for myocardial regeneration.
- Published
- 2006
- Full Text
- View/download PDF
17. Trifluoromethyl group as a pharmacophore: effect of replacing a CF3 group on binding and agonist activity of a glucocorticoid receptor ligand.
- Author
-
Betageri R, Zhang Y, Zindell RM, Kuzmich D, Kirrane TM, Bentzien J, Cardozo M, Capolino AJ, Fadra TN, Nelson RM, Paw Z, Shih DT, Shih CK, Zuvela-Jelaska L, Nabozny G, and Thomson DS
- Subjects
- Cells, Cultured, Chlorofluorocarbons, Methane pharmacology, Fibroblasts, HeLa Cells, Humans, Interleukin-6 biosynthesis, Interleukin-6 genetics, Ligands, Models, Molecular, Protein Binding, Protein Conformation drug effects, Receptors, Cytoplasmic and Nuclear drug effects, Structure-Activity Relationship, Transcription, Genetic drug effects, Chlorofluorocarbons, Methane chemistry, Receptors, Glucocorticoid agonists, Receptors, Glucocorticoid antagonists & inhibitors
- Abstract
Compound 1, a potent glucocorticoid receptor ligand, contains a quaternary carbon bearing trifluoromethyl and hydroxyl groups. This paper describes the effect of replacing the trifluoromethyl group on binding and agonist activity of the GR ligand 1. The results illustrate that replacing the CF3 group with a cyclohexylmethyl or benzyl group maintains the GR binding potency. These substitutions alter the functional behavior of the GR ligands from agonists to antagonists. Docking studies suggest that the benzyl analog 19 binds in a similar fashion as the GR antagonist, RU486. The central benzyl group of 19 and the C-11 dimethylaniline moiety of RU486 overlay. Binding of compound 19 is believed to force helix 12 to adopt an open conformation and this leads to the antagonist properties of the non-CF3 ligands carrying a large group at the center of the molecule.
- Published
- 2005
- Full Text
- View/download PDF
18. Isolation and characterization of neurogenic mesenchymal stem cells in human scalp tissue.
- Author
-
Shih DT, Lee DC, Chen SC, Tsai RY, Huang CT, Tsai CC, Shen EY, and Chiu WT
- Subjects
- Adipocytes metabolism, Adult, Animals, Bone Marrow Cells cytology, Calcium metabolism, Cell Culture Techniques methods, Cell Differentiation, Cell Lineage, Cell Membrane metabolism, Cells, Cultured, Chondrocytes metabolism, Culture Media, Cytokines metabolism, Fibroblast Growth Factors metabolism, Flow Cytometry, Humans, Mice, Middle Aged, Osteocytes metabolism, Phenotype, Reverse Transcriptase Polymerase Chain Reaction, Scalp cytology, Skin metabolism, Time Factors, Wound Healing, Gene Expression Regulation, Mesenchymal Stem Cells cytology, Neurons metabolism, Scalp metabolism
- Abstract
Recent studies have shown that adult tissues contain stem/ progenitor cells capable of not only generating mature cells of their tissue of origin but also transdifferentiating themselves into other tissue cells. Murine skin-derived precursor cells, for example, have been described as unique, nonmesenchymal-like stem cells capable of mesodermal and ectodermal neurogenic differentiation. Human-derived skin precursors are less well characterized. In this study, the isolation and characterization of adherent, mesenchymal stem cell-like cells from human scalp tissue (hSCPs) are described. hSCPs initially isolated by both medium-selection (ms-hSCPs) and single-cell (c-hSCPs) methods were cultured in medium containing epidermal growth factor and fibroblast growth factor-beta. Cultured ms-hSCPs and c-hSCPs demonstrated a consistent growth rate, continuously replicated in cell culture, and displayed a stable phenotype indistinguishable from each other. Both hSCPs expressed surface antigen profile (CDw90, SH2, SH4, CD105, CD166, CD44, CD49d-e, and HLA class I) similar to that of bone marrow mesenchymal stem cells (BM-MSCs). The growth kinetics, surface epitopes, and differentiation potential of c-hSCP cells were characterized and compared with BM-MSCs. In addition to differentiation along the osteogenic, chondrogenic, and adipogenic lineages, hSCPs can effectively differentiate into neuronal precursors evident by neurogenic gene expression of glial fibrillary acid protein, NCAM, neuron filament-M, and microtubule-associated protein 2 transcripts. Therefore, hSCPs may potentially be a better alternative of BM-MSCs for neural repairing, in addition to their other mesenchymal regenerative capacity. Our study suggests that hSCPs may provide an alternative adult stem cell resource that may be useful for regenerative tissue repair and autotransplantations.
- Published
- 2005
- Full Text
- View/download PDF
19. Development of a homogeneous binding assay for histamine receptors.
- Author
-
Crane K and Shih DT
- Subjects
- Animals, Binding Sites, Binding, Competitive, CHO Cells, Calcium metabolism, Cricetinae, Cyclic AMP metabolism, Radioligand Assay, Receptors, G-Protein-Coupled antagonists & inhibitors, Reproducibility of Results, Sensitivity and Specificity, Histamine metabolism, Histamine Antagonists metabolism, Receptors, G-Protein-Coupled metabolism, Receptors, Histamine metabolism, Scintillation Counting
- Abstract
Histamine is critically involved in a wide range of physiological and pathological processes through its actions at different receptors. Thus, histamine receptors have been actively pursued as therapeutic targets in the pharmaceutical industry for the treatment of a variety of diseases. There are currently four histamine receptors that have been cloned, all of which are G protein-coupled receptors. Studies from both academia and pharmaceutical companies have identified compounds that modulate the function of specific histamine receptors. These efforts led to the successful introduction of histamine H(1) and H(2) receptor antagonists for the treatment of allergy and excess gastric acid secretion, respectively. Histamine H(3) receptor ligands are currently under investigation for the treatment of obesity and neurological disorders. The recently identified histamine H(4) receptor is preferentially expressed in the immune tissues, suggesting a potential role in normal immune functions and possibly in the pathogenesis of inflammatory diseases. Even with the long history of histamine research and the important applications of histamine receptor ligands, assays to measure the affinity of compounds binding to histamine receptors are still routinely analyzed using a filtration assay, a very low-throughput assay involving washing and filtration steps. This article describes a simple, robust, and homogeneous binding assay based on the scintillation proximity assay (SPA) technology that provides results equivalent to those obtained using the more complex filtration assay. The SPA format is easily adapted to high-throughput screening because it is amenable to automation. In summary, this technique allows high-throughput screening of compounds against multiple histamine receptors and, thus, facilitates drug discovery efforts.
- Published
- 2004
- Full Text
- View/download PDF
20. Novel mechanisms of pH sensitivity in tuna hemoglobin: a structural explanation of the root effect.
- Author
-
Yokoyama T, Chong KT, Miyazaki G, Morimoto H, Shih DT, Unzai S, Tame JR, and Park SY
- Subjects
- Allosteric Site, Amino Acid Sequence, Animals, Carbon Monoxide chemistry, Crystallography, X-Ray, DNA, Complementary metabolism, Histidine chemistry, Humans, Hydrogen-Ion Concentration, Ligands, Models, Molecular, Molecular Sequence Data, Mutagenesis, Site-Directed, Oxygen metabolism, Protein Conformation, Sequence Homology, Amino Acid, Tuna, Hemoglobins chemistry
- Abstract
The crystal structure of hemoglobin has been known for several decades, yet various features of the molecule remain unexplained or controversial. Several animal hemoglobins have properties that cannot be readily explained in terms of their amino acid sequence and known atomic models of hemoglobin. Among these, fish hemoglobins are well known for their widely varying interactions with heterotropic effector molecules and pH sensitivity. Some fish hemoglobins are almost completely insensitive to pH (within physiological limits), whereas others show extremely low oxygen affinity under acid conditions, a phenomenon called the Root effect. X-ray crystal structures of Root effect hemoglobins have not, to date, provided convincing explanations of this effect. Sequence alignments have signally failed to pinpoint the residues involved, and site-directed mutagenesis has not yielded a human hemoglobin variant with this property. We have solved the crystal structure of tuna hemoglobin in the deoxy form at low and moderate pH and in the presence of carbon monoxide at high pH. A comparison of these models shows clear evidence for novel mechanisms of pH-dependent control of ligand affinity.
- Published
- 2004
- Full Text
- View/download PDF
21. Vitreous-induced modulation of integrins in retinal pigment epithelial cells: effects of fibroblast growth factor-2.
- Author
-
Meitinger D, Hunt DM, Shih DT, Fox JC, and Hunt RC
- Subjects
- Autoradiography, Cell Movement physiology, Cells, Cultured, Culture Media, Serum-Free, Electrophoresis, Polyacrylamide Gel, Fluorescent Antibody Technique, Humans, Microscopy, Confocal, Pigment Epithelium of Eye cytology, Precipitin Tests, Fibroblast Growth Factor 2 physiology, Integrins metabolism, Pigment Epithelium of Eye metabolism, Vitreous Body physiology
- Abstract
Growth in the presence of vitreous results in transformation of human RPE cells from an epithelioid to a fibroblast-like appearance and leads to an elevation of the expression of alpha(5) and alpha(2) integrins, while the level of alpha(3) integrin is reduced. These changes are inhibited by the presence of FGF-2. Vitreous treatment increases mobility, as does antibody neutralization of FGF-2 or antibody blockade of FGF receptors. The vitreous-induced rise in mobility depends on an increase in alpha(5) integrin expression since it is inhibited by anti-alpha(5) integrin antibodies. Expression of alpha(5) integrin as a result of infection of RPE cells with an alpha(5) integrin-encoding adenovirus induced morphological transformation and an increase in mobility similar to that seen with vitreous. It is concluded that a decrease in FGF-2 plays an important role in vitreous-induced alterations of RPE cell morphology, integrin expression and mobility. High FGF-2 levels prevent at least some of the increased mobility of RPE cells induced by vitreous. This is mediated via extracellular FGF-2 binding to FGF receptor(s) since antibodies to FGF-2 or to its receptor(s) mimic the effects of vitreous. Changes in mobility and morphology involve altered alpha(5) integrin expression since mobility is blocked by antibodies against these proteins while elevated alpha(5) integrin expression increases mobility and leads to morphological changes., ((C) 2001 Academic Press.)
- Published
- 2001
- Full Text
- View/download PDF
22. Alpha5 and alpha2 integrin gene transfers mimic the PDGF-B-induced transformed phenotype of fibroblasts in human skin.
- Author
-
Nesbit M, Schaider H, Berking C, Shih DT, Hsu MY, McBrian M, Crombleholme TM, Elenitsas R, Buck C, and Herlyn M
- Subjects
- Antigens, CD pharmacology, Cell Line, Cell Survival, Humans, Integrin alpha2, Integrin alpha5, Phenotype, Proto-Oncogene Mas, Proto-Oncogene Proteins c-sis pharmacology, Skin cytology, Skin pathology, Skin Physiological Phenomena, Transduction, Genetic, Antigens, CD genetics, Fibroblasts drug effects, Fibroblasts physiology, Gene Transfer Techniques, Proto-Oncogene Proteins c-sis genetics, Skin drug effects
- Abstract
Platelet-derived growth factor (PDGF)-B is a proto-oncogene capable of transforming fibroblasts. Using adenoviral vectors, we tested whether endogenous PDGF-B expression in human skin xenotransplants leads to changes in the expression of alpha5 and alpha2 integrin subunits and whether integrin overexpression leads to PDGF-related changes in the skin. In vitro, transduction of fibroblasts with PDGF-B or the integrin alpha5 subunit stimulated multilayered growth and spindle-type morphology, both markers of mesenchymal cell transformation. In vivo, PDGF-B transduction of the human dermis was associated with up-regulation of collagen and fibronectin synthesis, increases in alpha5 and alpha2 integrin subunit expression, vessel formation, and proliferation of fibroblasts, keratinocytes, and pericytes. A similar stromal response was induced when alpha5 and alpha2 integrin subunits were overexpressed in the human dermis, suggesting that integrins play a major role in the induction of a transformed phenotype of fibroblasts by PDGF-B.
- Published
- 2001
- Full Text
- View/download PDF
23. Altered ligand rebinding kinetics due to distal-side effects in hemoglobin chico (Lysbeta66(E10) --> thr).
- Author
-
Bonaventura C, Bonaventura J, Shih DT, Iben ET, and Friedman J
- Subjects
- Binding Sites, Carbon Monoxide metabolism, Globins metabolism, Heme chemistry, Hemoglobin A chemistry, Humans, Kinetics, Lasers, Oxygen metabolism, Photolysis, Protein Binding, Spectrum Analysis, Raman, Hemoglobins, Abnormal chemistry, Ligands
- Abstract
Hb Chico is an unusual human hemoglobin variant that has lowered oxygen affinity, but unaltered cooperativity and anion sensitivity. Previous studies showed these features to be associated with distal-side heme pocket alterations that confer increased structural rigidity on the molecule and that increase water content in the beta-chain heme pocket. We report here that the extent of nanosecond geminate rebinding of oxygen to the variant and its isolated beta-chains is appreciably decreased. Structural alterations in this variant decrease its oxygen recombination rates without significantly altering rates of migration out of the heme pocket. Data analysis indicates that one or more barriers that impede rebinding of oxygen from docking sites in the heme pocket are increased, with less consequence for CO rebinding. Resonance Raman spectra show no significant alterations in spectral regions sensitive to interactions between the heme iron and the proximal histidine residue, confirming that the functional differences in the variant are due to distal-side heme pocket alterations. These effects are discussed in the context of a schematic representation of heme pocket wells and barriers that could aid the design of novel hemoglobins with altered ligand affinity without loss of the normal allosteric responses that facilitate unloading of oxygen to respiring tissues.
- Published
- 1999
- Full Text
- View/download PDF
24. Adenoviral gene transfer of beta3 integrin subunit induces conversion from radial to vertical growth phase in primary human melanoma.
- Author
-
Hsu MY, Shih DT, Meier FE, Van Belle P, Hsu JY, Elder DE, Buck CA, and Herlyn M
- Subjects
- Adenoviridae, Animals, Antigens, CD biosynthesis, Apoptosis, Female, Gene Expression Regulation, Neoplastic, Humans, Integrin beta3, Mice, Mice, SCID, Neoplasm Invasiveness genetics, Phenotype, Platelet Membrane Glycoproteins biosynthesis, Skin Neoplasms genetics, Skin Neoplasms pathology, Tumor Cells, Cultured, Antigens, CD genetics, Cell Transformation, Neoplastic genetics, Gene Transfer Techniques, Melanoma genetics, Melanoma pathology, Platelet Membrane Glycoproteins genetics, Receptors, Vitronectin genetics
- Abstract
Expression of the beta3 subunit of the alphavbeta3 vitronectin receptor on melanoma cells is associated with tumor thickness and the ability to invade and metastasize. To address the role of alphavbeta3 in the complex process of progression from the nontumorigenic radial to the tumorigenic vertical growth phase of primary melanoma, we examined the biological consequences of overexpressing alphavbeta3 in early-stage melanoma cells using an adenoviral vector for gene transfer. Overexpression of functional alphavbeta3 in radial growth phase primary melanoma cells 1) promotes both anchorage-dependent and -independent growth, 2) initiates invasive growth from the epidermis into the dermis in three-dimensional skin reconstructs, 3) prevents apoptosis of invading cells, and 4) increases tumor growth in vivo. Thus, alphavbeta3 serves diverse biological functions during the progression from the nontumorigenic radial growth phase to the tumorigenic and-invasive vertical growth phase primary melanoma.
- Published
- 1998
- Full Text
- View/download PDF
25. Cardiac integrins the ties that bind.
- Author
-
Simpson DG, Reaves TA, Shih DT, Burgess W, Borg TK, and Terracio L
- Abstract
An elaborate series of morphogenetic events must be precisely coordinated during development to promote the formation of the elaborate three-dimensional structure of the normal heart. In this study we focus on discussing how interconnections between the cardiac myocyte and its surrounding environment regulate cardiac form and function. In vitro experiments from our laboratories provide direct evidence that cardiac cell shape is regulated by a dynamic interaction between constituents of the extracellular matrix (ECM) and by specific members of the integrin family of matrix receptors. Our data indicates that phenotypic information is stored in the tertiary structure and chemical identity of the ECM. This information appears to be actively communicated and transduced by the α1β1 integrin molecule into an intracellular signal that regulates cardiac cell shape and myofibrillar organization. In this study we have assessed the phenotypic consequences of suppressing the expression and accumulation of the α1 integrin molecule in aligned cultures of cardiac myocytes. In related experiments we have examined how the overexpression of α2 and α5 integrin, integrins normally not present or present at very low copy number on the cell surface of neonatal cardiac myocytes, affect cardiac protein metabolism. We also consider how biochemical signals and the mechanical signals mediated by the integrins may converge on common intracellular signaling pathways in the heart. Experiments with the whole embryo culture system indicate that angiotensin II, a peptide that carries information concerning cardiac load, plays a role in controling cardiac looping and the proliferation of myofibrils during development.
- Published
- 1998
26. Hemoglobin Old Dominion/Burton-upon-Trent, beta 143 (H21) His-->Tyr, codon 143 CAC-->TAC--a variant with altered oxygen affinity that compromises measurement of glycated hemoglobin in diabetes mellitus: structure, function, and DNA sequence.
- Author
-
Elder GE, Lappin TR, Horne AB, Fairbanks VF, Jones RT, Winter PC, Green BN, Hoyer JD, Reynolds TM, Shih DT, McCormick DJ, Kubik KS, Madden BJ, Head CG, Harvey D, and Roberts NB
- Subjects
- Adult, Aged, Diabetes Mellitus ethnology, Female, Humans, Ireland ethnology, Male, Mass Spectrometry, Middle Aged, Scotland ethnology, Diabetes Mellitus blood, Glycated Hemoglobin genetics
- Abstract
Objective: To determine the nature and characteristics of a unique hemoglobin variant that causes a spurious increase in glycated hemoglobin (HbA1c)., Material and Methods: Blood specimens from four unrelated persons with this hemoglobin variant were examined by conventional laboratory methods, including electrophoresis, high-performance ion-exchange chromatography, and isoelectric focusing; by amino acid sequence analysis, polymerase chain reaction-based DNA sequence analysis, and electrospray ionization mass spectrometry, to establish the molecular structure; and by studies of oxygen affinity under varied conditions, to define the functional characteristics of the hemoglobin variant., Results: The unique hemoglobin variant observed in these four cases is due to the mutation CAC-->TAC, at beta-globin gene codon 143, corresponding to beta 143 (H21) His-->Tyr. This amino acid substitution affects an important 2,3-diphosphoglycerate binding site and slightly increases the oxygen affinity of the hemoglobin variant., Conclusion: A hitherto unrecognized hemoglobin variant, encountered in four unrelated persons of Irish or Scots-Irish ancestry, hemoglobin Old Dominion/Burton-upon-Trent, beta 143 (H21) His-->Tyr, has now been characterized at the molecular, structural, and functional levels. Although it is associated with a slight increase in oxygen affinity, it is without hematologic effect, and its only clinical significance is that it coelutes with HbA1c on ion-exchange chromatography and thereby causes a spurious increase in HbA1c and compromises the use of this analyte to monitor the treatment of diabetes mellitus.
- Published
- 1998
27. Epitopes of adhesion-perturbing monoclonal antibodies map within a predicted alpha-helical domain of the integrin beta 1 subunit.
- Author
-
Shih DT, Boettiger D, and Buck CA
- Subjects
- 3T3 Cells, Amino Acid Sequence, Animals, Antibodies, Monoclonal metabolism, Chickens, Circular Dichroism, Epitope Mapping, Epitopes, B-Lymphocyte immunology, Fibronectins metabolism, Genes, Overlapping, Integrin beta1 chemistry, Integrin beta1 genetics, Mice, Molecular Sequence Data, Nuclear Magnetic Resonance, Biomolecular, Peptides chemistry, Peptides metabolism, Protein Structure, Secondary, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Structure-Activity Relationship, Cell Adhesion, Epitopes, B-Lymphocyte metabolism, Integrin beta1 metabolism
- Abstract
Several recent studies have demonstrated the involvement of various domains of the beta 1 integrin subunit in ligand binding. Thus, specific amino acids have been shown to be important in divalent cation binding, and others have been implicated by peptide crosslinking to play an intimate role in integrin-ligand interactions. Added to these data are previous observations that a group of adhesion-blocking anti-chicken beta 1 antibodies mapped within the first 160 amino acid residues of the subunit. These observations suggested that this region plays a critical role in integrin ligand recognition. In order to further define the domain in which the epitopes for these antibodies are clustered, a series of mouse/chicken chimeric beta 1 constructs were examined for their reactivity with each of these antibodies. Most of the antibodies recognize a region between residues 124 to 160 of the chicken beta 1 subunit. Computer modeling predicted a possible amphipathic alpha-helical configuration for the region between residues 141 to 160. Consistent with this prediction, circular dichroism and NMR analysis revealed a tendency for a synthetic peptide containing these residues to form an alpha-helix. The significance of this structural characteristic was demonstrated by a mutation at residue 149 that disrupted the alpha-helix formation and resulted in a loss of the ability to form heterodimers with alpha subunits, localize to focal contacts, or be transported to the cell surface. The direct involvement of residues 141 to 160 in ligand binding was supported by the ability of a peptide with this sequence to elute integrins from a fibronectin affinity column. Thus, our data suggest that residues 141 to 160 of the integrin beta 1 subunit, when arranged in an alpha-helix configuration, participate in ligand binding.
- Published
- 1997
- Full Text
- View/download PDF
28. EGF-R dependent regulation of keratinocyte survival.
- Author
-
Rodeck U, Jost M, Kari C, Shih DT, Lavker RM, Ewert DL, and Jensen PJ
- Subjects
- Cell Survival, Cells, Cultured, Humans, Integrins metabolism, Keratinocytes cytology, Skin cytology, Skin Physiological Phenomena, Apoptosis, ErbB Receptors physiology, Keratinocytes physiology
- Abstract
Tissue organization and maintenance within multicellular organisms is in part dependent on the ability of cells to undergo programmed cell death or apoptosis. Conversely, disruption of cell death pathways often is associated with tumor development. At present, the molecular control of apoptosis in epithelial cells is poorly understood. Here we describe evidence linking epidermal growth factor-receptor (EGF-R) activation to survival of normal human keratinocytes in culture. Inhibition of EGF-R activation by an anti-EGF-R antagonistic monoclonal antibody (mAb 425), followed by detachment of keratinocytes from the substratum, induced extensive death with several features of apoptosis in keratinocyte cultures. Other, non-epithelial normal human cells including melanocytes and fibroblasts, did not show this effect. Similar to EGF-R blockade by mAb 425, inhibition of the EGF-R tyrosine kinase activity using tyrphostin AG1478 resulted in lack of attachment and extensive cell death upon passaging. Attachment to keratinocyte-derived ECM partially resuced mAb 425-treated keratinocytes from cell death, indicating that adhesion-dependent and EGF-R-dependent signal transduction pathways serve partially overlapping but not redundant roles in supporting keratinocyte survival.
- Published
- 1997
- Full Text
- View/download PDF
29. A doubly cross-linked human hemoglobin. Effects of cross-links between different subunits.
- Author
-
Jones RT, Shih DT, Fujita TS, Song Y, Xiao H, Head C, and Kluger R
- Subjects
- Hemoglobins chemistry, Humans, Hydrolysis, Oxygen metabolism, Protein Conformation, Hemoglobins metabolism
- Abstract
Human deoxyhemoglobin cross-linked with trimesyl tris(3,5-dibromosalicylate) produces the previously reported cross-linked hemoglobin in which the epsilon amino groups of the two beta chain 82 lysyl residues are joined by a trimesyl bridge. Further specific modification of this protein directed to the alpha subunits with bis(3,5-dibromosalicyl)fumarate gives a doubly cross-linked material in which the epsilon-amino groups of the two alpha chain 99 lysyl residues are now joined by a fumaryl bridge. The singly cross-linked beta chain species binds oxygen cooperatively with a high oxygen affinity (P50 = 4.8 torr at pH 7.4). The addition of the second cross-linking reduces the oxygen affinity to 15.9 torr, which compares with 13.0 torr for the singly cross-linked alpha chain species. The doubly cross-linked hemoglobin retains significant cooperativity with a Hill coefficient of 2.3 compared with 3.0 for unmodified hemoglobin. Because some of the groups responsible for the Bohr effect are acylated, this doubly cross-linked hemoglobin exhibits 25% of the normal Bohr effect and less than 20% of the normal chloride effect. The use of two distinct cross-links within the same tetramer provides a material for physical and structural analysis as well as for further modifications for specific applications. The results indicate that the cross-link introducing the lowest oxygen affinity in the two singly cross-linked species appears to control the overall affinity in this doubly cross-linked species.
- Published
- 1996
- Full Text
- View/download PDF
30. Monoclonal antibody 9EG7 defines a novel beta 1 integrin epitope induced by soluble ligand and manganese, but inhibited by calcium.
- Author
-
Bazzoni G, Shih DT, Buck CA, and Hemler ME
- Subjects
- Amino Acid Sequence, Animals, Antibodies, Monoclonal pharmacology, Cell Adhesion drug effects, Chickens, Dose-Response Relationship, Drug, Epitope Mapping, Fibronectins pharmacology, Humans, Integrin beta1 drug effects, Ligands, Mice, Molecular Sequence Data, Oligopeptides metabolism, Protein Conformation drug effects, Tetradecanoylphorbol Acetate, Calcium pharmacology, Epitopes drug effects, Integrin beta1 immunology, Manganese pharmacology
- Abstract
The monoclonal antibody 9EG7 has been previously found to recognize an epitope induced by manganese on the integrin beta 1 chain (Lenter, M., Uhlig, H., Hamann, A., Jeno, P., Imhof, B., and Vestweber, D. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 9051-9055). Here we show that treatment of beta 1 integrins with manganese or soluble integrin ligands (e.g. fibronectin and RGD peptide) induced the 9EG7 epitope. This epitope was also induced upon EGTA treatment to remove calcium, and the addition of calcium inhibited 9EG7 epitope induction by manganese or by ligand. Further emphasizing the importance of the 9EG7 epitope, the 9EG7 antibody itself stimulated adhesion mediated by multiple beta 1 integrins, and conversely, ligands for alpha 2 beta 1, alpha 3 beta 1, alpha 4 beta 1, and alpha 5 beta 1 all stimulated 9EG7 expression. Together these results support a model whereby (i) calcium inhibits beta 1 integrin function because it prevents the appearance of a conformation favorable to ligand binding and (ii) manganese enhances beta 1 integrin function because it induces the same favorable conformation that is induced by adding ligand, or removing calcium. Notably, other beta 1-stimulating agents (magnesium and mAb TS2/16) did not induce 9EG7 expression unless ligand was also present. Thus, although 9EG7 may reliable detect the ligand-bound conformation of beta 1 integrins, its expression does not always correlate with integrin "activation". Finally, mouse/chicken beta 1 chimeric molecules were used to map the 9EG7 epitope to beta 1 residues 495-602 within the cysteine-rich region, and antibody cross-blocking studies showed that the 9EG7 epitope is distinct from all previously defined human beta 1 epitopes.
- Published
- 1995
- Full Text
- View/download PDF
31. Hb Washtenaw [ beta 11(A8)Val-->Phe]: an electrophorectically silent, unstable, low oxygen affinity variant associated with anemia and chronic cyanosis.
- Author
-
Krishnan K, Martinez F, Wille RT, Jones RT, Shih DT, Head C, Fairbanks VF, and Dabich L
- Subjects
- Adolescent, Adult, Aged, Child, Child, Preschool, Chromatography, Ion Exchange, Erythrocyte Indices, Female, Hemoglobinopathies complications, Hemoglobins, Abnormal chemistry, Hemoglobins, Abnormal genetics, Hemoglobins, Abnormal metabolism, Humans, Hungary ethnology, Male, Middle Aged, Oxygen metabolism, Pedigree, Protein Denaturation, Anemia genetics, Cyanosis etiology, Globins genetics, Hemoglobinopathies genetics, Hemoglobins, Abnormal isolation & purification, Hypertension, Pulmonary etiology
- Abstract
Hb Washtenaw [beta 11(A8)Val-->Phe] is a new, low oxygen affinity variant with a previously undescribed substitution, identified in seven members over three generations of a Hungarian-American family. The hemoglobin is mildly unstable and the family members studied are clinically asymptomatic but mildly cyanotic, and some exhibit mild anemia. The index case had severe pulmonary hypertension and some of the family members had increased pulmonary vascular resistance on echocardiography. An association between the inheritance of this abnormal hemoglobin and the pathogenesis of primary pulmonary hypertension is suggested but the mechanism is unclear.
- Published
- 1994
- Full Text
- View/download PDF
32. The chloride effect in human haemoglobin. A new kind of allosteric mechanism.
- Author
-
Perutz MF, Shih DT, and Williamson D
- Subjects
- Allosteric Regulation, Amino Acids chemistry, Amino Acids metabolism, Binding Sites, Humans, Hydrogen-Ion Concentration, Molecular Structure, Oxygen metabolism, Protein Conformation, Chlorides metabolism, Hemoglobins, Abnormal chemistry, Hemoglobins, Abnormal metabolism
- Abstract
Chloride reduces the oxygen affinity of mammalian haemoglobin by acting as an allosteric effector that stabilizes the quaternary deoxy (T) structure. Perutz and others showed evidence that it does so by neutralizing electrostatic repulsion by an excess of positive charges in the cavity that runs through the centre of the molecule, but without binding to any specific site. On the basis of this proposal, any amino acid substitutions in the central cavity that halve the number of excess positive charges should halve the chloride effect, neutralization of the excess positive charges should inhibit it and introduction of additional positive charges should enhance it. Charge changes on the surface of the molecule should leave it unaltered. We have tested this proposal by measuring the chloride effects in several abnormal human haemoglobins with replacements of polar residues in the central cavity or on the surface that we happened to come across. They all proved consistent with the proposal. It appears that diffusible electrolytes can modify allosteric equilibria without necessarily binding to any specific site. Our proposal also implies that amino acid substitutions that make the central cavity more electropositive should destabilize the T-structure and therefore increase the oxygen affinity, while substitutions that make it more electronegative should do the reverse. A survey of all substitutions reported in the literature shows that this is true, with a few exceptions due to special stereochemical effects.
- Published
- 1994
- Full Text
- View/download PDF
33. Hemoglobin Denver [alpha 2 beta 2(41) (C7) Phe-->Ser]: a low-O2-affinity variant associated with chronic cyanosis and anemia.
- Author
-
Stabler SP, Jones RT, Head C, Shih DT, and Fairbanks VF
- Subjects
- Adolescent, Amino Acid Sequence, Anemia complications, Anemia genetics, Chromatography, High Pressure Liquid, Chronic Disease, Cyanosis complications, Cyanosis genetics, Electrophoresis, Genetic Diseases, Inborn genetics, Hemoglobins, Abnormal chemistry, Humans, Isoelectric Focusing, Male, Molecular Sequence Data, Pedigree, Protein Conformation, Reticulocyte Count, Anemia blood, Cyanosis blood, Genetic Diseases, Inborn blood, Hemoglobins, Abnormal analysis, Hemoglobins, Abnormal metabolism
- Abstract
Objective: To report a previously undescribed low-O2-affinity hemoglobin variant that is associated with chronic cyanosis., Design: Pertinent laboratory and historical data for the index case (from Denver, Colorado) and certain family members were recorded, and the hemoglobin variant was characterized., Material and Methods: Electrophoresis, high-performance liquid chromatography (HPLC), and isoelectric focusing were used to examine blood specimens for the presence of hemoglobin variants, and the O2 affinity of whole blood was determined. The abnormal peptide detected on reverse-phase HPLC of separated globin chains was analyzed for its amino acid composition and sequence., Results: Although no abnormal hemoglobin band separated from hemoglobin A on electrophoresis, HPLC, and isoelectric focusing, a heat test showed hemoglobin instability, and O2 affinity studies disclosed an appreciably right-shifted dissociation curve. On chromatography, the new variant--hemoglobin Denver--was found to be due to a substitution of serine for phenylalanine at position 41 (C7) in the beta chain. In addition to substantial reduction in O2 affinity, hemoglobin Denver is accompanied by moderate reticulocytosis and mild anemia., Conclusion: Hemoglobin Denver causes no clinical symptoms other than cyanosis, which is attributable to the low O2 affinity.
- Published
- 1994
- Full Text
- View/download PDF
34. Cross-linking hemoglobin by design: lessons from using molecular clamps.
- Author
-
Kluger R, Jones RT, and Shih DT
- Subjects
- Binding Sites, Blood Substitutes chemistry, Blood Substitutes metabolism, Cross-Linking Reagents, Esterification, Hemoglobins chemistry, Hemoglobins metabolism, Humans, In Vitro Techniques, Indicators and Reagents, Kinetics, Oxygen metabolism, Phosphates chemistry, Blood Substitutes chemical synthesis, Hemoglobins chemical synthesis
- Abstract
The development of a red cell substitute by chemical modification of hemoglobin has been approached as a systematic, iterative process. Acyl phosphate methyl esters were designed as anionic electrophiles to permit selective acylation of amino groups in the cationic site of hemoglobin which binds polyanions. Kinetic studies with systematically substituted acyl phosphates and amines show that the reaction is controlled by a reversible addition step followed by an irreversible elimination step. Acyl phosphate methyl esters which are derivatives of rigid dicarboxylic acids introduce cross-links in human hemoglobin between amino groups in the beta subunits (epsilon-NH2-Lys-82, alpha-NH2-Val-1) and permit correlation of oxygen binding properties with cross-link structure. The data suggest that the cross-link maintains cooperativity while reducing overall oxygen affinity by lowering the affinity of the R form for oxygen rather than by perturbing the R,T equilibrium of native hemoglobin. Materials produced from deoxyhemoglobin with a cross-link between positions 1 and 82 of the two beta units have appropriate oxygen affinity for red cell substitutes. The use of a trifunctional cross-linker, trimesyl tris(methyl phosphate) selectively produces hemoglobin with the desired 1-82 connection in good yield. The reagent is readily prepared and the properties of this chemically modified hemoglobin are suitable for trial as a red cell substitute, closely resembling those of optimized materials produced by recombinant technology. Further work is producing new chemicals and providing structural information.
- Published
- 1994
- Full Text
- View/download PDF
35. A mutagenic study of the allosteric linkage of His(HC3)146 beta in haemoglobin.
- Author
-
Shih DT, Luisi BF, Miyazaki G, Perutz MF, and Nagai K
- Subjects
- Allosteric Regulation genetics, Escherichia coli genetics, Hemoglobin A drug effects, Hemoglobin A genetics, Hemoglobins, Abnormal genetics, Histidine genetics, Humans, Hydrogen Bonding, Hydrogen-Ion Concentration, Kinetics, Magnetic Resonance Spectroscopy, Models, Chemical, Mutagenesis, Site-Directed, Protein Conformation, Recombinant Proteins biosynthesis, Recombinant Proteins metabolism, Sodium Chloride pharmacology, X-Ray Diffraction, Hemoglobin A metabolism, Hemoglobins, Abnormal metabolism, Histidine metabolism, Oxygen metabolism
- Abstract
We have examined the contribution of His(HC3)146 beta to the alkaline Bohr effect of human haemoglobin (HbA) by replacing it with Gln, using site-directed mutagenesis, and studying the structural and functional consequences. Oxygen equilibrium curves of the mutant show that the effect of pH on the oxygen affinity, the alkaline Bohr effect, is half that of HbA in the presence of chloride ion and less than 10% in its absence. Crystallographic analysis shows that the mutation introduced only small structural changes localized to the site of substitution, proving that the replacement of the hydrogen bond between the ionizable side-chain of His146 beta and Asp94 beta by a hydrogen bond between the unionizable side-chain of Gln146 beta and the same aspartate is solely responsible for the reduction of the alkaline Bohr effect. Our data confirm that His(HC3)146 beta is predominantly responsible for the chloride-independent component of the alkaline Bohr effect which results from the breaking of the hydrogen bond between His(HC3)146 beta and Asp(FG1)94 beta accompanying the transition from the quaternary deoxy to oxy-structure.
- Published
- 1993
- Full Text
- View/download PDF
36. Modification of human hemoglobin with methyl acyl phosphates derived from dicarboxylic acids. Systematic relationships between cross-linked structure and oxygen-binding properties.
- Author
-
Jones RT, Head CG, Fujita TS, Shih DT, Wodzinska J, and Kluger R
- Subjects
- Amino Acid Sequence, Chromatography, High Pressure Liquid, Electrophoresis, Polyacrylamide Gel, Fumarates chemistry, Globins chemistry, Humans, Molecular Sequence Data, Phthalic Acids chemistry, Cross-Linking Reagents chemistry, Dicarboxylic Acids chemistry, Hemoglobins chemistry, Hemoglobins metabolism, Oxygen metabolism, Phosphates chemistry
- Abstract
Human hemoglobin was reacted with five dicarboxylic acid bis(methyl phosphate) reagents under different ligand conditions. The bis(methyl phosphate) reagents tested were derived from fumaric, isophthalic, terephthalic, trans-stilbene-3,3'-dicarboxylic, and trans-stilbene-4,4'-dicarboxylic acids. These acyl phosphate mixed anhydrides are anionic electrophiles and will react with N-terminal amino and lysyl epsilon-amino groups to form amides. The major and many of the minor reaction products that result have been isolated and structurally characterized by globin chain and peptide analysis. Products which are not cross-linked, intrachain linked, and interchain singly and doubly cross-linked occur in proportions which depend upon the reaction conditions and reagent. Modifications of the beta chains were limited to the amino groups of beta 1Val, beta 82Lys, and, to a minor extent, beta 144Lys. In the case of the smaller reagents, the amino groups of alpha 1Val, alpha 99Lys, and, to a minor extent, alpha 139Lys were modified. The oxygen binding affinities of most of the major modified hemoglobins have been measured and are characterized by P50 values from about 1/2 to over 5 times that of unmodified human hemoglobin. Most show strong cooperativity with Hill coefficients (n) of 2.0 or greater. Several of the products that are cross-linked between the beta 1Val of one chain and the beta 82Lys of the other chain have oxygen affinities in a physiologically useful range for oxygen transport and delivery. An inverse linear correlation has been found between the log of P50 and bridging distances for the hemoglobins cross-linked between beta 1Val of one chain and the beta 82Lys of the other chain.(ABSTRACT TRUNCATED AT 250 WORDS)
- Published
- 1993
- Full Text
- View/download PDF
37. Three-point cross-linking: potential red cell substitutes from the reaction of trimesoyl tris(methyl phosphate) with hemoglobin.
- Author
-
Kluger R, Wodzinska J, Jones RT, Head C, Fujita TS, and Shih DT
- Subjects
- Amino Acid Sequence, Binding Sites, Diphosphoglyceric Acids metabolism, Humans, Macromolecular Substances, Magnetic Resonance Spectroscopy, Mathematics, Models, Molecular, Models, Structural, Models, Theoretical, Organophosphorus Compounds chemical synthesis, Organophosphorus Compounds chemistry, Peptide Fragments metabolism, Spectrophotometry, Infrared, Blood Substitutes, Cross-Linking Reagents metabolism, Erythrocyte Transfusion, Hemoglobin A metabolism, Organophosphorus Compounds metabolism
- Abstract
The symmetrical trifunctional cross-linking reagent trimesoyl tris(methyl phosphate) (3), reacts selectively with amino groups (beta 1Val and beta 82Lys) in the diphosphoglycerate binding site of human hemoglobin A, producing cross-linked tetrameric species in good yield. A major species is triply linked, alpha alpha beta 1(82) greater than B beta 82, where B symbolizes benzene-1,3,5-tricarbonyl. Both this triply linked species and the doubly linked species, alpha alpha beta 1B beta 82, produced from deoxyhemoglobin have a considerably lower oxygen affinity than does native hemoglobin while maintaining a high degree of cooperativity (n50 = 2.4), making them potentially useful as red cell substitutes, in principle delivering twice as much oxygen as whole blood between pO2 = 100 and = 40 Torr. The yield of products indicates that triply and doubly linked species form in parallel so that there are independent routes to each. It is proposed that differences in routes are due to stereoisomerism about the amide bonds which form from reaction of the reagent with the protein.
- Published
- 1992
- Full Text
- View/download PDF
38. Structure-function relationships in the low-affinity mutant haemoglobin Aalborg (Gly74 (E18)beta----Arg).
- Author
-
Fermi G, Perutz MF, Williamson D, Stein P, and Shih DT
- Subjects
- Amino Acid Sequence, Guanidine, Guanidines, Hemoglobins, Abnormal metabolism, Humans, Macromolecular Substances, Models, Molecular, Protein Conformation, Structure-Activity Relationship, Arginine, Glycine, Hemoglobins, Abnormal chemistry
- Abstract
Haemoglobin Aalborg (Gly74 (E18)beta----Arg) has a reduced oxygen affinity, in both the absence and the presence of organic phosphates; it has a raised affinity for organic phosphates, and it is moderately unstable. By contrast, haemoglobin Shepherds Bush (Gly74 (E18)beta----Asp) has an increased oxygen affinity in both the absence and the presence of organic phosphates, a diminished affinity for organic phosphates and is also unstable. We have determined the crystal structure of deoxyhaemoglobin Aalborg at 2.8 A resolution and compared it to the structures of deoxy- and oxyhaemoglobin A and of deoxyhaemoglobin Shepherds Bush. The guanidinium group of Arg74(E18)beta protrudes from the haem pocket and donates hydrogen bonds to the E and F helices. The carboxylate group of Asp74(E18)beta forms a hydrogen bond only with residue EF6 and is partially buried, which may be why haemoglobin Shepherds Bush appears to be more unstable than haemoglobin Aalborg. To discover why the latter has a low oxygen affinity, we superimposed the B, G and H helices of haemoglobin A, whose conformation is known to be unaffected by ligand binding, on those of haemoglobin Aalborg. This also brought helices E and the haems into superposition, but revealed a shift of the F helix of deoxyhaemoglobin Aalborg towards the EF-corner. This shift is opposite to that which occurs on ligand binding and on transition to the quaternary oxy-structure, and is linked to an increased tilt of the proximal histidine residue away from the haem axis. Since the relative positions of helices E and F and of the haem group are thought to be the main determinants of the changes in oxygen affinity, the shift of helix F may account for the reduced oxygen affinity of haemoglobin Aalborg. The shift may be due to a combination of steric and electrostatic effects introduced by the arginine residue's side-chain. The effects of the arginine and aspartate substitutions at position E18 beta on the 2,3-diphosphoglycerate affinity are equal and opposite. They can be quantitatively accounted for by the electrostatic attraction or repulsion by the oppositely charged side-chains.
- Published
- 1992
- Full Text
- View/download PDF
39. Involvement of the distal histidine in the low affinity exhibited by Hb Chico (Lys beta 66----Thr) and its isolated beta chains.
- Author
-
Bonaventura C, Cashon R, Bonaventura J, Perutz M, Fermi G, and Shih DT
- Subjects
- Carbon Monoxide metabolism, Hemoglobins, Abnormal metabolism, Humans, Hydrogen-Ion Concentration, Kinetics, Ligands, Models, Molecular, Oxygen metabolism, X-Ray Diffraction, Hemoglobins, Abnormal chemistry, Histidine chemistry
- Abstract
Hemoglobin (Hb) Chico (Lys beta 66----Thr at E10) has a diminished oxygen affinity (Shih, D. T.-b., Jones, R. T., Shih, M. F.-C., Jones, M. B., Koler, R. D., and Howard, J. (1987) Hemoglobin 11, 453-464). Our studies show that its P50 is about twice that of Hb A and that its cooperativity, anion, and Bohr effects between pH 7 and 8 are normal. The Bohr effect above pH 8 is somewhat reduced, indicating a small but previously undocumented involvement of the ionic bond formed by Lys beta 66 in the alkaline Bohr effect. Since the oxygen affinity of the alpha-hemes is likely to be normal, that of the beta-hemes in the tetramer is likely to be reduced by the equivalent of 1.2 kcal/mol beta-heme in binding energy. Remarkably, both initial and final stages of oxygen binding to Hb Chico are of lowered affinity relative to Hb A under all conditions examined. The isolated beta chains also show diminished oxygen affinity. In T-state Hb A, Lys(E10 beta) forms a salt bridge with one of the heme propionates, but comparison with other hemoglobin variants shows that rupture of this bridge cannot be the cause of the low oxygen affinity. X-ray analysis of the deoxy structure has now shown that Thr beta 66 either donates a hydrogen bond to or accepts one from His beta 63 via a bridging water molecule. This introduces additional steric hindrance to ligand binding to the T-state that results in slower rates of ligand binding. We measured the O2/CO partition coefficient and the kinetics of oxygen dissociation and carbon monoxide binding and found that lowered O2 and CO affinity is also exhibited by the R-state tetramers and the isolated beta chains of Hb Chico.
- Published
- 1991
40. Was the loss of the D helix in alpha globin a functionally neutral mutation?
- Author
-
Komiyama NH, Shih DT, Looker D, Tame J, and Nagai K
- Subjects
- Escherichia coli genetics, Hemoglobins metabolism, Humans, Models, Molecular, Oxygen metabolism, Protein Conformation, Transfection, Globins chemistry, Mutation
- Abstract
Proteins in the globin family are found in a variety of species from bacteria to man. From the many globin sequences known, evolutionary trees have been constructed showing that alpha and beta globins diverged from a common ancestor between 425 and 500 million years ago, after vertebrate species had appeared and roughly when sharks and bony vertebrates diverged. The alpha and beta globins assemble to form tetrameric haemoglobin, alpha 2 beta 2, which can switch between quaternary states having high and low oxygen affinity. This allows the protein to bind oxygen cooperatively and therefore efficiently transport oxygen from the lungs to respiring tissues. The alpha and beta globins have closely related tertiary structures, being alpha-helical proteins with similar haem-binding sites. Most globins consist of eight helices, designated A to H from the N terminus, connected by short nonhelical segments, but all known vertebrate alpha globins lack a D helix. Because the loss of this helix by alpha globin occurred shortly before tetrameric haemoglobin appeared, it might be a functionally important mutation required for a tetramer assembly or allostery. We have now tested this idea by engineering human haemoglobins containing beta subunits without a D helix and alpha subunits with a D helix. Both of these mutations have little effect on the oxygen-binding properties of the molecule. Thus it is possible that deletion of the D helix in the alpha subunit was caused by a neutral mutation.
- Published
- 1991
- Full Text
- View/download PDF
41. Functional role of the distal valine (E11) residue of alpha subunits in human haemoglobin.
- Author
-
Tame J, Shih DT, Pagnier J, Fermi G, and Nagai K
- Subjects
- Escherichia coli genetics, Fourier Analysis, Globins biosynthesis, Globins genetics, Hemoglobins biosynthesis, Hemoglobins chemistry, Humans, Kinetics, Ligands, Mutagenesis, Site-Directed, Oxygen metabolism, Protein Conformation, Recombinant Proteins biosynthesis, Recombinant Proteins genetics, X-Ray Diffraction, Hemoglobins genetics, Valine genetics
- Abstract
We have expressed human alpha-globin to a high level in Escherichia coli as a fusion protein, purified it and removed the N-terminal leader sequence by site-specific proteolysis with blood coagulation factor Xa. The apo globin has been refolded and reconstituted with haem and native beta-globin to form fully functional haemoglobin (Hb) with properties identical to those of native human Hb. By site-directed mutagenesis we have altered the distal residues of the alpha subunits and compared the functional properties of these mutant proteins. The rates of various ligands binding to these proteins in the R-state have been reported by Mathews et al. Here, we present the oxygen equilibrium curves of three E11 alpha mutants and the crystal structures of two of these mutants in the deoxy form. Replacing the distal valine residue of alpha-globin with alanine, leucine or isoleucine has no effect on the oxygen affinity of the protein in either quaternary state, in contrast to the equivalent mutations of beta subunits. The crystal structure of the valine E11 alpha----isoleucine mutant shows that the larger E11 residue excludes water from the haem pocket, but causes no significant movement of other amino acid residues. We conclude that the distal valine residue of alpha-globin does not control the oxygen affinity of the protein by sterically hindering ligand binding.
- Published
- 1991
- Full Text
- View/download PDF
42. Site-directed mutagenesis in haemoglobin. Functional role of tyrosine-42(C7) alpha at the alpha 1-beta 2 interface.
- Author
-
Imai K, Fushitani K, Miyazaki G, Ishimori K, Kitagawa T, Wada Y, Morimoto H, Morishima I, Shih DT, and Tame J
- Subjects
- Hemoglobins genetics, Hemoglobins metabolism, Hydrogen Bonding, Magnetic Resonance Spectroscopy, Mutagenesis, Site-Directed, Oxygen metabolism, Spectrometry, Mass, Fast Atom Bombardment, Spectrophotometry, Infrared, Spectrophotometry, Ultraviolet, Hemoglobins chemistry, Tyrosine chemistry
- Abstract
To clarify the functional role of Tyr-42(C7) alpha, which forms a hydrogen bond with Asp-99(G1) beta at the alpha 1-beta 2 interface of human deoxyhaemoglobin, we engineered two artificial mutant haemoglobins (Hb), in which Tyr-42 alpha was replaced by Phe (Hb Phe-42 alpha) or His (Hb His-42 alpha), and investigated their oxygen binding properties together with structural consequences of the mutations by using various spectroscopic probes. Like most of the natural Asp-99 beta mutants, Hb Phe-42 alpha showed a markedly increased oxygen affinity, a reduced Bohr effect and diminished co-operativity. Structural probes such as ultraviolet-region derivative and oxy-minus-deoxy difference spectra, resonance Raman scattering and proton nuclear magnetic resonance spectra indicate that, in Hb Phe-42 alpha, the deoxy T quaternary structure is highly destabilized and the strain imposed on the Fe-N epsilon (proximal His) bond is released, stabilizing the oxy tertiary structure. In contrast with Hb Phe-42 alpha, Hb His-42 alpha showed an intermediately impaired function and only moderate destabilization of the T-state, which can be explained by the formation of a new, weak hydrogen bond between His-42 alpha and Asp-99 beta. Spectroscopic data were consistent with this assumption. The present study proves that the hydrogen bond between Tyr-42 alpha and Asp-99 beta plays a key role in stabilizing the deoxy T structure and consequently in co-operative oxygen binding.
- Published
- 1991
- Full Text
- View/download PDF
43. Immunohistochemical and molecular analysis of beta 1 and beta 3 integrins.
- Author
-
Buck C, Albelda S, Damjanovich L, Edelman J, Shih DT, and Solowska J
- Subjects
- Animals, Chickens genetics, Collagen metabolism, Cytoskeleton metabolism, Cytoskeleton ultrastructure, DNA genetics, Humans, Laminin metabolism, Melanoma chemistry, Mice, Neoplasm Proteins analysis, Neoplasms chemistry, Organ Specificity, Protein Conformation, Protein Engineering, Recombinant Proteins biosynthesis, Structure-Activity Relationship, Integrins biosynthesis, Integrins chemistry, Integrins physiology
- Abstract
The expression and function of integrin subunits was examined by immunohistochemical staining of normal and malignant tissues and by producing specific changes in avian beta subunit cDNA that were subsequently expressed in mammalian cells. Most tissues express only a restricted number of integrins. These include primarily those thought to function as collagen/laminin receptors. With the exception of metastatic melanomas, tumors show a general down regulation of integrins. Structure/function studies of the beta subunit show that the cytoplasmic domain is required for inclusion in adhesion plaques and for promotion of adhesive functions; that the transmembrane domain is required for subunit association, but not proper alpha subunit selection; and that the amino terminal one third of the subunit must remain intact for subunit selection and ligand binding to occur.
- Published
- 1990
- Full Text
- View/download PDF
44. Hb Johnstown [beta 109 (G11) Val----Leu]: a new electrophoretically silent variant that causes erythrocytosis.
- Author
-
Jones RT, Saiontz HI, Head C, Shih DT, and Fairbanks VF
- Subjects
- Adult, Blood Protein Electrophoresis, Electrophoresis, Cellulose Acetate, Female, Globins chemistry, Hemoglobins, Abnormal physiology, Hemolysis, Humans, Hemoglobins, Abnormal chemistry, Polycythemia blood
- Abstract
A high oxygen affinity hemoglobin, previously undescribed, was found in a healthy, asymptomatic patient with mild erythrocytosis and left-shifted hemoglobin-O2 dissociation curve. The hemoglobin variant could not be distinguished from Hb A by any of several electrophoretic methods nor by ion exchange chromatography. It was separated and analyzed by reversed phase high performance liquid chromatography. Structural analysis revealed the substitution beta 109 (G11) Val----Leu. The variant was named Hb Johnstown. The amino acid substitution perhaps disrupts alpha 1 beta 1 contacts in the deoxyhemoglobin conformation, thus shifting the equilibrium towards the high affinity oxyhemoglobin conformation.
- Published
- 1990
- Full Text
- View/download PDF
45. Structural and functional consequences of amino acid substitutions in hemoglobin as manifested in natural and artificial mutants.
- Author
-
Imai K, Shih DT, Tame J, Nagai K, and Miyazaki G
- Subjects
- Alligators and Crocodiles, Amino Acid Sequence, Animals, Hemoglobins metabolism, Humans, Mutation, Oxygen metabolism, Protein Conformation, Structure-Activity Relationship, Hemoglobins genetics
- Abstract
Compiled data for more than 440 natural human hemoglobin mutants with single amino acid substitutions indicate that molecular properties (oxygen binding, structural stability, ease of autooxidization, etc.) of more than half of them are altered in some way and that the mode of alteration is closely related to the region within the hemoglobin molecule in which the substitution takes place. The present study gives a quantitative basis for the correlations. By means of protein engineering, including site-directed mutagenesis, several artificial mutants of human hemoglobin were prepared and their oxygen binding properties were studied to investigate the functional consequences of the amino acid substitutions which have not yet been isolated in natural mutants. These artificial mutants gave straight-forward information regarding the major factors regulating the oxygen affinity of heme and the identification of a Bohr group in the alpha chain. On the other hand the mutants, which were designed to test some hypotheses for the molecular evolution in hemoglobin, did not necessarily give the results predicted from accumulated structure-function data obtained from the study of natural mutants and X-ray crystallographic analyses.
- Published
- 1989
46. Histidine proton resonances of carbonmonoxyhaemoglobins A and Cowtown in chloride-free buffer.
- Author
-
Shih DT, Peratz MF, Gronenborn AM, and Clore GM
- Subjects
- Humans, Magnetic Resonance Spectroscopy, Carboxyhemoglobin, Hemoglobin A, Hemoglobins, Abnormal, Histidine, Protons
- Abstract
A re-examination of the C-2 histidine proton resonances of haemoglobins A and Cowtown (His HC3(146) beta----Leu) in chloride-free Hepes buffer has shown that all the resonances present in haemoglobin A are present in haemoglobin Cowtown, so that the pKa of His HC3(146) beta cannot be determined by nuclear magnetic resonance in this buffer.
- Published
- 1987
- Full Text
- View/download PDF
47. Influence of anions and protons on the Adair coefficients of haemoglobins A and Cowtown (His HC3(146) beta----Leu).
- Author
-
Shih DT and Perutz MF
- Subjects
- Histidine, Humans, Hydrogen-Ion Concentration, Oxyhemoglobins metabolism, Anions, Hemoglobin A, Hemoglobins, Abnormal, Protons
- Abstract
We have measured the contribution of the alkaline Bohr effect of the C-terminal histidine residues of the beta-chains of haemoglobin A by comparing haemoglobin A with haemoglobin Cowtown in which those histidine residues are replaced by leucine. Oxygenation of a stripped 2.5 mM (haem) solution of haemoglobin A yielded 0.19 H+/haem, while oxygenation of a similar solution of haemoglobin Cowtown produced no change of pH. Oxygen equilibria measured at 60 microM-haem in 0.1 M-Hepes buffer gave an alkaline Bohr effect of -0.21 H+/haem for haemoglobin A and only -0.01 H+/haem for haemoglobin Cowtown, even though its Hill's coefficient was greater than 2 throughout the pH range studied. These results prove that the chloride-independent part of the alkaline Bohr effect is due to the C-terminal histidine residues of the beta-chains. Oxygen equilibria measured in 0.095 M-bis-Tris buffers with minimal chloride or with 0.1 M-chloride showed the contribution of those histidine residues to the alkaline Bohr effect to be about 0.2 H+/haem, independent of chloride concentration. Determination of the individual Adair coefficients in the three different buffers indicated that pH and chloride tend to have their greatest effects at the second or third steps of oxygenation when the change of quaternary structure is most likely to occur; between pH 7 and 9, the fourth Adair coefficient is only very slightly affected by pH and not significantly by chloride.
- Published
- 1987
- Full Text
- View/download PDF
48. Modification of hemoglobin with site-directed bifunctional reagents.
- Author
-
Kavanaugh MP, Shih DT, and Jones RT
- Subjects
- 4,4'-Diisothiocyanostilbene-2,2'-Disulfonic Acid, 4-Acetamido-4'-isothiocyanatostilbene-2,2'-disulfonic Acid analogs & derivatives, Adenosine Triphosphate pharmacology, Chemical Phenomena, Chemistry, Chromatography, High Pressure Liquid, Electrophoresis, Polyacrylamide Gel, Humans, 4-Acetamido-4'-isothiocyanatostilbene-2,2'-disulfonic Acid pharmacology, Adenosine Triphosphate analogs & derivatives, Cross-Linking Reagents pharmacology, Hemoglobins, Stilbenes pharmacology
- Abstract
Reaction of deoxy-Hb with the periodate-oxidized derivatives of nicotinamide adenine dinucleotide (o-NAD), phosphoribosyl pyrophosphate (o-PRPP), adenosine triphosphate (o-ATP), glucose-1-phosphate (o-glc-1-P) and nicotinamide adenine dinucleotide phosphate (o-NADP) led to formation of cross-link adducts in varying yields as determined by SDS-polyacrylamide gel electrophoresis. Oxygen equilibrium studies were performed on Hb's cross-linked with o-NAD, o-PRPP and o-ATP. These derivatives were found to have increased oxygen affinity and were cross-linked between the beta chains. Inositol hexaphosphate (IHP) blocked modification by these reagents, suggesting that modification was occurring in the organic phosphate binding site. In addition, it was found that the bifunctional reagent 4,4'-diisothiocyanatostilbene-2,2'-disulfonate (DIDS) also led to formation of Hb cross-linked between the beta chains, but resulted in a derivative with a dramatically decreased oxygen affinity, properties making it a potential candidate as an Hb-based cell-free blood substitute.
- Published
- 1987
- Full Text
- View/download PDF
49. Involvement of Glu G3(101)beta in the function of hemoglobin. Comparative O2 equilibrium studies of human mutant hemoglobins.
- Author
-
Shih DT, Jones RT, Imai K, and Tyuma I
- Subjects
- Allosteric Site, Amino Acid Sequence, Chlorides pharmacology, Electrochemistry, Humans, Hydrogen Bonding, Hydrogen-Ion Concentration, Kinetics, Mutation, Oxygen metabolism, Protein Conformation, Thermodynamics, Hemoglobin A metabolism, Hemoglobins, Abnormal metabolism
- Abstract
The glutamyl residue at G3(101)beta of normal hemoglobin (Hb A) is one of the alpha 1 beta 2 subunit contacts which are vital to O2 binding properties of the molecule. The O2 equilibrium properties of the four mutants with different substitutions at this site are studied in order to elucidate the role of this residue. Under stripped conditions with minimum chloride the order of O2 affinity is: Hb A (Glu) much less than Hb Rush (Gln) less than or equal to Hb British Columbia (Lys) less than or equal to Hb Potomac (Asp) less than or equal to Hb Alberta (Gly). The first Adair constants, K1, for the mutant hemoglobins are greater than that for Hb A whereas the fourth, K4, are similar, indicating that the allosteric constants (L) of these mutants are greatly reduced. Therefore, the G3(101)beta residue contributes intrinsically to the strengthening of the structural constraints that are imposed upon the deoxy (T) forms but not the oxy (R) form. On addition of 0.1 M Cl- and further addition of 2,3-diphosphoglycerate or inositol hexaphosphate, their O2 affinities and cooperativities are altered, reflecting different responses to anionic ligands. Hb Rush exhibits a stronger chloride effect than Hb A and the other variants and, as a result, an increased Bohr effect and a smaller heat of oxygenation at pH 6.5. These changes are consistent with an increased positive net charge in the central cavity of Hb Rush and subsequent extra anion binding in the deoxy form. The tetramer to dimer dissociation constants are estimated to be greater than normal for Hb British Columbia and less than normal for Hb Alberta. This comparative study of the G3(101)beta mutants indicates that the size and the charge of this residue may influence the switching of two neighboring interchain hydrogen bonds that occurs during oxygenation of normal hemoglobin.
- Published
- 1985
50. Hb Long Island: a hemoglobin variant with a methionyl extension at the NH2 terminus and a prolyl substitution for the normal histidyl residue 2 of the beta chain.
- Author
-
Barwick RC, Jones RT, Head CG, Shih MF, Prchal JT, and Shih DT
- Subjects
- Adult, Hemoglobins, Abnormal isolation & purification, Humans, Macromolecular Substances, Male, Peptide Fragments analysis, Trypsin, Genetic Variation, Hemoglobins, Abnormal genetics, Histidine, Methionine, Proline
- Abstract
Hb Long Island was found in a diabetic man and his nondiabetic mother as the result of a routine clinical measurement of Hb AIc. It is present in amounts approximately equal to Hb A. Its alpha chains are normal but its beta chains have two alterations compared to the normal. A methionyl residue is attached to the usual NH2-terminal valyl residue. This valyl residue is followed by prolyl residue in place of the usual histidyl residue 2. The remaining sequence of the beta chain is normal. No hemoglobin or abnormal beta chain containing only the prolyl substitution could be detected by several different electrophoretic and HPLC procedures. We postulate that Hb Long Island is the result of a mutation in which a single nucleotide change causes the substitution of a prolyl residue for the normal histidyl residue at position 2 of the beta chain. We further postulate that this abnormal prolyl residue inhibits enzymatic cleavage of the initiator methionyl residue from the abnormal beta chain during posttranslational processing. Although the oxygen affinities of the whole blood, suspended cells, and hemolysate are normal, the affinity of the isolated Hb Long Island is slightly decreased and the effects of organic phosphates are reduced compared to normal. These changes are consistent with the loss of the normal histidyl residue 2 and the extension of the NH2-terminal end of the beta-chain molecule.
- Published
- 1985
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.