65 results on '"Shaw KS"'
Search Results
2. Local limits to Gentrification: implications for a new urban policy
- Author
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BRIDGE, G, ATKINSON, R, SHAW, KS, BRIDGE, G, ATKINSON, R, and SHAW, KS
- Published
- 2005
3. Effect of acute anemia on the healing of intestinal anastomoses in the rabbit.
- Author
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Buchmiller-Crair TL, Kim CS, Won NH, Chopourian HL, Shaw KS, and Fonkalsrud EW
- Published
- 2001
- Full Text
- View/download PDF
4. 3-dimensional stereophotogrammetry: an effective tool for detecting disease progression in lupus erythematosus panniculitis.
- Author
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Hashemi KB, Ortiz-López LI, Santiago-Soltero KM, Nguyen TT, Castillo RL, Dedeoglu F, Ganske IM, Shaw KS, and Vleugels RA
- Published
- 2024
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- View/download PDF
5. Application of Risk-Based Cancer Screening in Patients With Dermatomyositis.
- Author
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Stone CJ, Faden DF, Xie L, Lopes Almeida Gomes L, Hejazi EZ, Werth VP, and Shaw KS
- Published
- 2024
- Full Text
- View/download PDF
6. From traditional to targeted: the changing trajectory of therapies in dermatomyositis.
- Author
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Castillo RL, Hashemi K, Rainone E, Shaw KS, and Vleugels RA
- Subjects
- Humans, Immunosuppressive Agents therapeutic use, Molecular Targeted Therapy methods, Molecular Targeted Therapy trends, Immunotherapy, Adoptive methods, Immunotherapy, Adoptive trends, Dermatomyositis therapy, Dermatomyositis immunology
- Abstract
Purpose of Review: New breakthroughs in our understanding of dermatomyositis (DM) have spawned the recent development of novel agents that specifically target key drivers in DM immunopathogenesis. This review aims to provide a comprehensive overview of new and forthcoming therapies for DM and to highlight their mechanisms of action, best evidence to date, and potential impact on disease management., Recent Findings: Strategies that either counteract dysregulated interferon signaling [via the inhibition of interferon β, the type I interferon receptor subunit 1 (IFNAR1), or janus kinase (JAK)-signal transducer and activator of transcription (STAT) transduction] or induce durable autoreactive B cell depletion through chimeric antigen receptor (CAR) T-cell therapy appear to hold the most promise for sustained remission in DM., Summary: The trajectory of DM treatments is rapidly evolving, fueled by the unparalleled insights provided by multiomic studies and big data analysis pipelines. Targeted therapies that maximize both efficacy and safety have the potential to complement or replace traditional immunosuppressives and revolutionize the approach to the management of DM., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
- Published
- 2024
- Full Text
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7. Pediatric cutaneous Crohn disease: A case series of 89 patients and review.
- Author
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McKay GE, Liu L, Shaw KS, Shakshouk H, Murphy MJ, Damsky W, Ortega-Loayza AG, Caplan AS, Arkin LM, and Shields BE
- Subjects
- Humans, Male, Child, Female, Adolescent, Retrospective Studies, Skin Diseases drug therapy, Child, Preschool, Crohn Disease drug therapy
- Abstract
Background: Cutaneous (or "Metastatic") Crohn disease (CCD) is a rare and underrecognized disease characterized by cutaneous granulomatous inflammation. We describe patient demographics, clinical characteristics, histology, and treatment of 89 pediatric cases of CCD, including 78 previously reported and 11 new cases seen at four academic institutions. We emphasize the efficacy of biologic mono- and dual therapy., Methods: PubMed identified cases using keywords including "metastatic Crohn disease" and "cutaneous Crohn disease". Patients were identified by retrospective review of the electronic health record including histopathologic diagnosis consistent with CCD. Chart review collected demographic, clinical, and histologic data., Results: Most pediatric patients with CCD are male 55% (49/89), present with edema (73/89, 82%) and erythema (47/89, 53%) of the genitals (33/49, 67%), and have intestinal Crohn disease (69/89, 78%). Oral corticosteroids (53/75, 71%) and metronidazole (29/75, 39%) are the most frequently prescribed medications. Of the 17 patients treated with tumor necrosis factor (TNF)-blockade, 94% (16/17) had partial or total clearance. Ustekinumab resulted in clearance of cutaneous disease in two patients (2/3, 67%) and partial clearance in one patient (1/3, 33%). Two cases achieved total clearance with the use of dual biologic therapy defined as the use of two biologic therapies with differing mechanisms of action or the use of a biologic therapy and small molecule inhibitor., Conclusions: TNF blockade is an effective treatment for pediatric CCD, and interleukin-12/23 inhibitors may be similarly effective. Consideration of dual biologic therapy may be useful in pediatric patients requiring discordant therapies for their intestinal and cutaneous CD., (© 2024 The Author(s). Pediatric Dermatology published by Wiley Periodicals LLC.)
- Published
- 2024
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8. Area Deprivation and Disease Severity in Adult Patients With Discoid Lupus Erythematosus.
- Author
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Faden DF, Xie L, Stone C, Lopes Almeida Gomes L, Le T, Ezeh N, Buckingham WR, Kind A, Vleugels RA, Werth VP, Arkin L, and Shaw KS
- Subjects
- Humans, Male, Female, Adult, Middle Aged, Cross-Sectional Studies, Aged, Young Adult, Adolescent, Philadelphia epidemiology, Lupus Erythematosus, Discoid epidemiology, Severity of Illness Index
- Abstract
Importance: The association of area deprivation with outcomes in discoid lupus erythematosus (DLE) remains poorly understood., Objective: To determine the association between US Census block measures of deprivation and disease severity in adult patients with DLE., Design, Setting, and Participants: This cross-sectional study included 154 patients with DLE seen between January 1, 2007, and January 1, 2024, at a single-center referral-based specialty rheumatologic-dermatology clinic in Philadelphia, Pennsylvania. Patients were aged 18 to 73 years and were enrolled in the University of Pennsylvania's Cutaneous Lupus Erythematosus Database study. Data were analyzed between January 1, 2024, and May 8, 2024., Exposures: Residence in a highly disadvantaged area as geocoded by a state area deprivation index (ADI)., Main Outcomes and Measures: The main outcome was DLE disease severity as codified by the validated Cutaneous Lupus Erythematosus Disease Area and Severity Index (CLASI) damage and activity scores., Results: A total of 154 adult patients with DLE (128 women [83%] and 26 men [17%]; mean [SD] age, 43 [13] years; 6 [4%] Asian individuals, 98 [64%] Black individuals, 2 [1%] Hispanic individuals, 46 [30%] White individuals, and 2 individuals [1%] with other race or ethnicity; 78 [51%] with an ADI >5; 43 who currently smoked [28%];and 56 [36%] with concurrent systemic lupus erythematosus) were included in the analysis. By multivariable logistic regression, residence within communities with an ADI greater than 5 was associated with nearly 4-fold greater odds of moderate to severe damage (odds ratio [OR], 3.90; 95% CI, 1.27-12.69] and activity (OR, 3.31; 95% CI, 1.27-9.44). Concurrent cigarette smoking was similarly associated with greater odds of moderate to severe damage (OR, 3.15; 95% CI, 1.09-10.29). After controlling for ADI and other confounders, race was not significantly associated with DLE disease severity., Conclusions and Relevance: The results of this cross-sectional study suggest that geospatial disadvantage is associated with DLE disease severity independent of race. This invites a paradigm shift that considers the social context within which racial disparities are observed, highlighting the potential for geographically targeted interventions and policy changes to improve patient outcomes in DLE.
- Published
- 2024
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9. Innovation in Dermatomyositis.
- Author
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Hashemi KB, Shaw KS, Castillo R, and Vleugels RA
- Subjects
- Humans, Interferon-Induced Helicase, IFIH1 immunology, Adenosine Triphosphatases, DNA-Binding Proteins, Transcription Factors, Dermatomyositis immunology, Dermatomyositis therapy, Autoantibodies immunology
- Abstract
Dermatomyositis (DM) is a rare autoimmune disease defined by the presence of characteristic cutaneous findings, an increased cancer risk, and variable extracutaneous pathology involving the muscles, lungs, gastrointestinal tract, heart, and/or joints. Although the pathogenesis of DM remains incompletely understood, the discovery of myositis-specific autoantibodies has been an important step forward in understanding disease heterogeneity in DM and stratifying risk for extracutaneous disease and malignancy. Moreover, the recent elucidation of key immunologic drivers of DM has laid the groundwork for the development of novel, targeted treatments in the DM therapeutic pipeline., Competing Interests: Disclosure The authors have no conflicts of interest or funding sources to disclose., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2025
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10. De novo autoimmune connective tissue disease and mortality in patients treated with anti-programmed death receptor-1 and anti-programmed death-ligand 1 therapy: a population-level cohort study.
- Author
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Tang K, Rajeh A, Shaw KS, Nguyen N, Wan G, Hashemi KB, Castillo RL, Kwatra SG, LeBoeuf NR, Ann Vleugels R, and Semenov YR
- Subjects
- Humans, Female, Male, Middle Aged, Aged, Autoimmune Diseases drug therapy, Autoimmune Diseases mortality, Adult, Cohort Studies, Programmed Cell Death 1 Receptor antagonists & inhibitors, Connective Tissue Diseases drug therapy, Connective Tissue Diseases mortality, Connective Tissue Diseases immunology, B7-H1 Antigen antagonists & inhibitors, Immune Checkpoint Inhibitors therapeutic use, Immune Checkpoint Inhibitors adverse effects
- Abstract
Competing Interests: Conflicts of interest Y.R.S. is an advisory board member/consultant of and has received honoraria from Incyte Corporation, Castle Biosciences, Galderma, Sanofi and Pfizer outside of the submitted work.
- Published
- 2024
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11. Anifrolumab in recalcitrant cutaneous dermatomyositis: A multicenter retrospective cohort study.
- Author
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Shaw KS, Hashemi KB, Castillo RL, Rainone E, Ho AW, Kahn PJ, Oza VS, Femia A, and Vleugels RA
- Abstract
Competing Interests: Conflicts of interest None disclosed.
- Published
- 2024
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12. Publisher Correction: Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus.
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Law C, Wacleche VS, Cao Y, Pillai A, Sowerby J, Hancock B, Horisberger A, Bracero S, Skidanova V, Li Z, Adejoorin I, Dillon E, Benque IJ, Nunez DP, Simmons DP, Keegan J, Chen L, Baker T, Brohawn PZ, Al-Mossawi H, Hao LY, Jones B, Rao N, Qu Y, Alves SE, Jonsson AH, Shaw KS, Vleugels RA, Massarotti E, Costenbader KH, Brenner MB, Lederer JA, Hultquist JF, Choi J, and Rao DA
- Published
- 2024
- Full Text
- View/download PDF
13. Response to McMullan et al, "Safety of dermatologic medications in pregnancy and lactation: An Update - Part I: Pregnancy," and Yaghi et al., "Safety of dermatologic medications in pregnancy and lactation: An Update - Part II: Lactation".
- Author
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Smith NA and Shaw KS
- Subjects
- Humans, Female, Pregnancy, Pregnancy Complications drug therapy, Breast Feeding, Lactation drug effects, Dermatologic Agents adverse effects, Dermatologic Agents therapeutic use
- Abstract
Competing Interests: Conflicts of interest None disclosed.
- Published
- 2024
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14. Two-Stage Syphilis Testing.
- Author
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Lopes Almeida Gomes L, Stone CJ, and Shaw KS
- Subjects
- Female, Humans, Middle Aged, False Negative Reactions, Penicillin G administration & dosage, Penicillin G therapeutic use, Anti-Bacterial Agents administration & dosage, Anti-Bacterial Agents therapeutic use, Injections, Intramuscular, Syphilis diagnosis, Syphilis drug therapy, Syphilis Serodiagnosis methods, Treponema pallidum isolation & purification
- Published
- 2024
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15. Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus.
- Author
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Law C, Wacleche VS, Cao Y, Pillai A, Sowerby J, Hancock B, Horisberger A, Bracero S, Skidanova V, Li Z, Adejoorin I, Dillon E, Benque IJ, Nunez DP, Simmons DP, Keegan J, Chen L, Baker T, Brohawn PZ, Al-Mossawi H, Hao LY, Jones B, Rao N, Qu Y, Alves SE, Jonsson AH, Shaw KS, Vleugels RA, Massarotti E, Costenbader KH, Brenner MB, Lederer JA, Hultquist JF, Choi J, and Rao DA
- Subjects
- Female, Humans, Male, Cell Differentiation, Epigenomics, Gene Expression Profiling, Interleukin-22 immunology, Interleukin-22 metabolism, T-Lymphocytes, Helper-Inducer immunology, T-Lymphocytes, Helper-Inducer metabolism, Basic Helix-Loop-Helix Transcription Factors metabolism, CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes metabolism, Chemokine CXCL13 metabolism, Interferon Type I immunology, Interferon Type I metabolism, Lupus Erythematosus, Systemic immunology, Lupus Erythematosus, Systemic metabolism, Lupus Erythematosus, Systemic genetics, Proto-Oncogene Proteins c-jun metabolism, Receptors, Aryl Hydrocarbon metabolism
- Abstract
Systemic lupus erythematosus (SLE) is prototypical autoimmune disease driven by pathological T cell-B cell interactions
1,2 . Expansion of T follicular helper (TFH ) and T peripheral helper (TPH ) cells, two T cell populations that provide help to B cells, is a prominent feature of SLE3,4 . Human TFH and TPH cells characteristically produce high levels of the B cell chemoattractant CXCL13 (refs.5,6 ), yet regulation of T cell CXCL13 production and the relationship between CXCL13+ T cells and other T cell states remains unclear. Here, we identify an imbalance in CD4+ T cell phenotypes in patients with SLE, with expansion of PD-1+ /ICOS+ CXCL13+ T cells and reduction of CD96hi IL-22+ T cells. Using CRISPR screens, we identify the aryl hydrocarbon receptor (AHR) as a potent negative regulator of CXCL13 production by human CD4+ T cells. Transcriptomic, epigenetic and functional studies demonstrate that AHR coordinates with AP-1 family member JUN to prevent CXCL13+ TPH /TFH cell differentiation and promote an IL-22+ phenotype. Type I interferon, a pathogenic driver of SLE7 , opposes AHR and JUN to promote T cell production of CXCL13. These results place CXCL13+ TPH /TFH cells on a polarization axis opposite from T helper 22 (TH 22) cells and reveal AHR, JUN and interferon as key regulators of these divergent T cell states., (© 2024. The Author(s), under exclusive licence to Springer Nature Limited.)- Published
- 2024
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16. Depression in patients with Raynaud's phenomenon: A case-control study in the National Institutes of Health's All of Us Research Program.
- Author
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Chen GF, Shaw KS, Xu S, Hashemi KB, Castillo RL, Vleugels RA, and Cohen JM
- Subjects
- United States epidemiology, Humans, Case-Control Studies, Depression, National Institutes of Health (U.S.), Population Health, Raynaud Disease complications, Raynaud Disease epidemiology
- Abstract
Competing Interests: Conflicts of interest Dr Cohen serves on a data and safety monitoring board (DSMB) for Advarra. The remaining authors have no conflicts of interest to declare.
- Published
- 2024
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17. Pediatric consultative dermatology: A survey of the Society for Pediatric Dermatology workforce reveals shortcomings in existing practice models of pediatric dermatology consult services in the United States.
- Author
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Pineider JL, Rangu SA, Shaw KS, Cipriano SD, and Oza VS
- Subjects
- Humans, Child, United States, Skin, Surveys and Questionnaires, Workforce, Referral and Consultation, Dermatology
- Abstract
The rate of pediatric hospitalization for cutaneous pathology has been increasing in recent years, often requiring the expertise of consulting pediatric dermatologists; however, the infrastructure of inpatient pediatric dermatology consultative services remains poorly characterized. We sought to assess the structure, consult volume, physician compensation, and utilization of teledermatology in pediatric dermatology inpatient services to better understand the current care model. Our survey of 118 pediatric dermatologists revealed that 89% of respondents see between 1 and 10 new consults per week, 39% perform all inpatient consults including evening and weekends without assistance from other providers, 71% do not have protected time during the week to provide inpatient consultations, and only 10% receive financial compensation via stipend. By highlighting both the high demand for pediatric consultative dermatology as well as the significant burden placed on these providers by existing practice models, we hope to encourage a reappraisal of the current infrastructure of pediatric inpatient dermatology to increase structural and financial support for this vital service., (© 2024 Wiley Periodicals LLC.)
- Published
- 2024
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18. Rapid Improvement in Recalcitrant Cutaneous Juvenile Dermatomyositis With Anifrolumab Treatment.
- Author
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Shaw KS, Reusch DB, Castillo RL, Hashemi KB, Sundel R, Dedeoglu F, and Vleugels RA
- Subjects
- Humans, Skin, Antibodies, Monoclonal, Humanized therapeutic use, Administration, Cutaneous, Dermatomyositis drug therapy
- Published
- 2024
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19. Use of 3-Dimensional Stereophotogrammetry to Detect Disease Progression in Craniofacial Morphea.
- Author
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Shaw KS, Nguyen TT, Rajeh A, Cohen SM, Semenov YR, Reusch DB, Dedeoglu F, Vleugels RA, and Ganske IM
- Subjects
- Adult, Humans, Female, Child, Adolescent, Reproducibility of Results, Prospective Studies, Imaging, Three-Dimensional methods, Photogrammetry methods, Disease Progression, Scleroderma, Localized diagnostic imaging
- Abstract
Importance: Objectively determining disease progression in craniofacial morphea (CM) is challenging, as clinical findings of disease activity are often lacking., Objective: To evaluate the utility of 3-dimensional (3D) stereophotogrammetry in detecting disease progression in CM over time., Design, Setting, and Participants: This prospective cohort study included 27 pediatric and adult patients with CM from 2 hospitals in Boston (Boston Children's Hospital and Brigham & Women's Hospital) consecutively enrolled from April 1, 2019, to March 1, 2023. Review of 3D stereophotogrammetry images and data analysis occurred from March 1 to April 1, 2023., Main Outcomes and Measures: Clinical and 3D stereophotogrammetry assessments were performed at 2- to 12-month intervals, depending on the clinical context. The 3D stereophotogrammetry images were then qualitatively rated as demonstrating no progression or definitive progression by an expert (board-certified plastic craniofacial surgeon) and nonexpert (board-certified dermatologist) in 3D stereophotogrammetry. In addition, κ coefficients were calculated for interrater reliability., Results: Of 27 patients with CM (19 female; median age, 14 [range, 5-40] years) and 3D stereophotogrammetry images obtained from a minimum of 2 time points (median, 4 [range, 2-10] images) spaced a median of 3 (range, 2-12) months apart, 10 experienced progression of their disease based on clinical assessments performed during the study period. In all cases in which clinical progression was favored, blinded qualitative assessment of 3D stereophotogrammetry images also favored progression with substantial interrater reliability (κ = 0.80 [95% CI, 0.61-0.99]). Furthermore, review of 3D stereophotogrammetry detected occult progression of asymmetry not noted on clinical examination in 3 additional patients., Conclusions and Relevance: In this prospective cohort study, blinded assessment of sequential 3D stereophotogrammetry images in patients with CM not only corroborated clinical assessment of disease progression but also detected occult progression of facial asymmetry not appreciable on clinical examination alone. Therefore, 3D stereophotogrammetry may serve as a useful adjunct to clinical examination of patients with CM over time. Future investigations are warranted to validate 3D stereophotogrammetry as an outcome measure in CM.
- Published
- 2023
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20. Increased risk of depression in patients with discoid lupus erythematosus: a nested, case-control study in the All of Us Research Program.
- Author
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Chen GF, Shaw KS, Sanchez-Melendez S, Vleugels RA, and Cohen JM
- Subjects
- Humans, Case-Control Studies, Depression epidemiology, Depression etiology, Population Health, Lupus Erythematosus, Discoid complications, Lupus Erythematosus, Systemic
- Abstract
Competing Interests: Conflicts of interest: J.M.C. serves on a data and safety monitoring board for Advarra; the other authors declare no conflicts of interest.
- Published
- 2023
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21. Anifrolumab for Adolescent Discoid Lupus Erythematosus.
- Author
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Shaw KS, Rajeh A, Le T, Kahn PJ, Oza VS, Arkin LM, and Vleugels RA
- Subjects
- Humans, Adolescent, Antibodies, Monoclonal, Humanized therapeutic use, Lupus Erythematosus, Discoid drug therapy
- Published
- 2023
- Full Text
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22. Mepolizumab for refractory eosinophilic fasciitis: a retrospective analysis from two tertiary care centres.
- Author
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Sanchez-Melendez SN, Shaw KS, Pan CX, Taylor DL, Shahriari N, Mazori DR, and Vleugels RA
- Subjects
- Humans, Retrospective Studies, Tertiary Care Centers, Eosinophilia drug therapy, Anti-Asthmatic Agents
- Published
- 2023
- Full Text
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23. Diffuse Cutaneous Eruption.
- Author
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Shaw KS, Sanchez-Melendez S, and Vleugels RA
- Subjects
- Humans, Exanthema etiology
- Published
- 2023
- Full Text
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24. Eosinophilic Fasciitis.
- Author
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Shaw KS and Vleugels RA
- Subjects
- Humans, Eosinophilia, Fasciitis diagnosis
- Published
- 2023
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25. Re-emphasizing mechanism in the community ecology of disease.
- Author
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Shaw KS and Civitello DJ
- Abstract
1 . Hosts and their parasites exist within complex ecological communities. However, the role that non-focal community members, species which cannot be infected by a focal pathogen, may play in altering parasite transmission is often only studied in the lens of the "diversity-disease" relationship by focusing on species richness. This approach largely ignores mechanistic species interactions and risks collapsing our understanding of the community ecology of disease down to defining the prominence of "amplification" vs. "dilution" effects. 2 . However, non-focal species vary in their traits, densities, and types of interactions with focal hosts and parasites. Therefore, a community ecology approach based on the mechanisms underlying parasite transmission, host harm, and dynamic species interactions may better advance our understanding of parasite transmission in complex communities. 3 . Using the concept of the parasite's basic reproductive ratio, R
0 , as a generalizable framework, we examine several critical mechanisms by which interactions among hosts, parasites, and non-focal species modulate transmission and provide examples from relevant literature. 4 . By focusing on the mechanism by which non-focal species impact transmission, we can emphasize the similarities among classic paradigms in the community ecology of disease, gain new insights into parasite invasion and persistence, community traits correlated with disease dilution or amplification, and the feasibility of biocontrol for parasites of conservation, agricultural, or human health concern., Competing Interests: Conflict of Interest: The authors do not have any conflicts of interest.- Published
- 2021
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26. Comment on "Patient preference for cellulitis treatment: At-home care is preferred to hospital-based treatment".
- Author
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Shaw KS, Karagounis TK, Yin L, Gibbon G, Betensky RA, Lo Sicco KI, and Femia AN
- Subjects
- Anti-Bacterial Agents therapeutic use, Hospitals, Humans, Patient Preference, Cellulitis drug therapy, Home Care Services
- Published
- 2021
- Full Text
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27. COVID-19 in Individuals Treated With Long-Term Hydroxychloroquine: A Propensity Score-Matched Analysis of Cicatricial Alopecia Patients.
- Author
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Shaw KS, Yin L, Shah JK, Sally RA, Svigos KS, Adotama PU, Tuan HH, Shapiro J, Betensky RA, and Lo Siccoa KI
- Subjects
- Antiviral Agents therapeutic use, Humans, Pandemics, Propensity Score, Treatment Outcome, Alopecia diagnosis, Alopecia drug therapy, Cicatrix, Hydroxychloroquine therapeutic use, COVID-19 Drug Treatment
- Abstract
Early in the COVID-19 pandemic, anti-malarial agent hydroxychloroquine (HCQ) was touted as a potentially effective COVID-19 treatment due to its purported antiinflammatory and antiviral effects.
- Published
- 2021
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28. Benign "lumps and bumps" of the vulva: A review.
- Author
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Sally R, Shaw KS, and Pomeranz MK
- Abstract
Vulvar dermatology represents a challenge for many providers. Given that the vulva is both a gynecologic and dermatologic organ, patients with cutaneous lesions involving the vulva may present to primary care, gynecology, or dermatology. Particularly within dermatology, the vulva remains understudied, which can lead to anxiety among providers regarding appropriate next steps in the diagnosis and management of vulvar lesions. Thus, the purpose of this review is to highlight commonly encountered anatomic variants and benign neoplasms of the vulva, distinguish them from key pathologic mimickers, and provide guidance to practicing dermatologists on what may constitute normal vulvar variations., Competing Interests: None., (© 2021 Published by Elsevier Inc. on behalf of Women's Dermatologic Society.)
- Published
- 2021
- Full Text
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29. Mucocutaneous Manifestations of Multisystem Inflammatory Syndrome in Children During the COVID-19 Pandemic.
- Author
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Young TK, Shaw KS, Shah JK, Noor A, Alperin RA, Ratner AJ, Orlow SJ, Betensky RA, Shust GF, Kahn PJ, and Oza VS
- Subjects
- Adolescent, Child, Child, Preschool, Female, Humans, Infant, Male, Mucous Membrane, New York City, Retrospective Studies, COVID-19 complications, Skin Diseases etiology, Systemic Inflammatory Response Syndrome complications
- Abstract
Importance: To date, no study has characterized the mucocutaneous features seen in hospitalized children with multisystem inflammatory syndrome in children (MIS-C) or the temporal association of these findings with the onset of systemic symptoms., Objective: To describe the mucocutaneous findings seen in children with MIS-C during the height of the coronavirus disease 2019 (COVID-19) pandemic in New York City in 2020., Design, Setting, and Participants: A retrospective case series was conducted of 35 children admitted to 2 hospitals in New York City between April 1 and July 14, 2020, who met Centers for Disease Control and Prevention and/or epidemiologic criteria for MIS-C., Main Outcomes and Measures: Laboratory and clinical characteristics, with emphasis on mucocutaneous findings, of children who met criteria for MIS-C. The characterization of mucocutaneous features was verified by 2 board-certified pediatric dermatologists., Results: Twenty-five children (11 girls [44%]; median age, 3 years [range, 0.7-17 years]) were identified who met definitional criteria for MIS-C; an additional 10 children (5 girls [50%]; median age, 1.7 years [range, 0.2-15 years]) were included as probable MIS-C cases (patients met all criteria with the exception of laboratory test evidence of severe acute respiratory syndrome coronavirus 2 [SARS-CoV-2] infection or known exposure). The results of polymerase chain reaction tests for SARS-CoV-2 were positive for 10 patients (29%), and the results of SARS-CoV-2 immunoglobulin G tests were positive for 19 patients (54%). Of the 35 patients, 29 (83%) exhibited mucocutaneous changes, with conjunctival injection (n = 21), palmoplantar erythema (n = 18), lip hyperemia (n = 17), periorbital erythema and edema (n = 7), strawberry tongue (n = 8), and malar erythema (n = 6) being the most common findings. Recognition of mucocutaneous findings occurred a mean of 2.7 days (range, 1-7 days) after the onset of fever. The duration of mucocutaneous findings varied from hours to days (median duration, 5 days [range, 0-11 days]). Neither the presence nor absence of mucocutaneous findings was significantly associated with overall disease severity., Conclusions and Relevance: In this case series of hospitalized children with suspected MIS-C during the COVID-19 pandemic, a wide spectrum of mucocutaneous findings was identified. Despite their protean and transient nature, these mucocutaneous features serve as important clues in the recognition of MIS-C.
- Published
- 2021
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30. Acrofacial purpura and necrotic ulcerations in COVID-19: a case series from New York City.
- Author
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Karagounis TK, Shaw KS, Caplan A, Lo Sicco K, and Femia AN
- Subjects
- Adult, Aged, Aged, 80 and over, Ear, Female, Genitalia, Humans, Male, Middle Aged, Necrosis virology, New York City, SARS-CoV-2, Skin pathology, Thrombophilia virology, COVID-19 complications, Facial Dermatoses virology, Foot Dermatoses virology, Hand Dermatoses virology, Purpura virology, Skin Ulcer virology
- Published
- 2020
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31. Case Report of Traumatic Uterine Rupture in a Multigravida Woman with Emergency Department Cesarean Section.
- Author
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Wiese KS, Ernest S, and Dukes WS
- Abstract
Introduction: Uterine ruptures in blunt trauma are an extremely rare complication. Furthermore, while perimortem cesarean sections in cardiac arrest patients are a well-established practice in emergency medicine, cesarean sections in the emergency department are rarely performed on non-arresting patients., Case Report: A multigravida woman at approximately 24 weeks gestation presented as a transfer from an outside hospital after a motor vehicle collision. Upon arriving to our facility, she underwent an emergency cesarean section in the trauma bay and was found to have a uterine rupture with the fetus free floating in the right upper quadrant of the abdomen., Conclusion: Uterine rupture is a rare but important complication of blunt abdominal trauma in pregnant patients. Resuscitative cesarean sections may be necessary for favorable outcomes. A well prepared and diversified team was essential to maternal survival.
- Published
- 2020
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32. Exchanging Dermatoscopes for Stethoscopes: Has the COVID-19 Pandemic Highlighted Gaps in US Dermatology Residency Training?
- Author
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Shaw KS, Karagounis TK, Yin L, Svigos K, Gibbon GT, Betensky RA, and Lo Sicco KI
- Subjects
- Attitude of Health Personnel, COVID-19, Coronavirus Infections epidemiology, Female, Humans, Intensive Care Units organization & administration, Male, Organizational Innovation, Pandemics statistics & numerical data, Pneumonia, Viral epidemiology, United States, Coronavirus Infections prevention & control, Dermatology education, Education, Medical, Graduate organization & administration, Medical Staff, Hospital organization & administration, Outcome Assessment, Health Care, Pandemics prevention & control, Pneumonia, Viral prevention & control, Workforce organization & administration
- Published
- 2020
33. Immunophenotypic CD56 Variation Within a Single Patient With Blastic Plasmacytoid Dendritic Cell Neoplasm.
- Author
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Lopez AT, Shaw KS, Yamany T, Husain S, and Geskin L
- Subjects
- Aged, CD4 Antigens metabolism, Hematologic Neoplasms pathology, Humans, Interleukin-3 Receptor alpha Subunit metabolism, Male, Phenotype, Skin Neoplasms pathology, Bone Marrow pathology, CD56 Antigen metabolism, Dendritic Cells pathology, Hematologic Neoplasms metabolism, Skin Neoplasms metabolism
- Published
- 2018
- Full Text
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34. Combination of imiquimod with cryotherapy in the treatment of penile intraepithelial neoplasia.
- Author
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Shaw KS, Nguyen GH, Lacouture M, and Deng L
- Published
- 2017
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35. Reticulocyte Preference and Stage Development of Plasmodium vivax Isolates.
- Author
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Lim C, Pereira L, Saliba KS, Mascarenhas A, Maki JN, Chery L, Gomes E, Rathod PK, and Duraisingh MT
- Subjects
- Humans, Malaria, Vivax parasitology, Malaria, Vivax pathology, Plasmodium vivax physiology, Reticulocytes parasitology, Viral Tropism
- Abstract
Plasmodium vivax, the most widely distributed human malaria parasite, is restricted to reticulocytes, limiting its asexual proliferation. In recent years, cases of severe and high-level P. vivax parasitemia have been reported, challenging the assumption that all isolates are equally restricted. In this article, we analyze the reticulocyte preference of a large number of Indian P. vivax isolates. Our results show that P. vivax isolates significantly vary in their level of reticulocyte preference. In addition, by carefully staging the parasites, we find that P. vivax schizonts are largely missing in peripheral blood, with the presence of schizonts in circulation correlating with a high reticulocyte preference., (© The Author 2016. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com.)
- Published
- 2016
- Full Text
- View/download PDF
36. Presence of animal feeding operations and community socioeconomic factors impact salmonellosis incidence rates: An ecological analysis using data from the Foodborne Diseases Active Surveillance Network (FoodNet), 2004-2010.
- Author
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Shaw KS, Cruz-Cano R, Jiang C, Malayil L, Blythe D, Ryan P, and Sapkota AR
- Subjects
- Humans, Incidence, Salmonella Food Poisoning microbiology, United States epidemiology, Food Microbiology, Salmonella Food Poisoning epidemiology, Salmonella enterica isolation & purification
- Abstract
Nontyphoidal Salmonella spp. are a leading cause of foodborne illness. Risk factors for salmonellosis include the consumption of contaminated chicken, eggs, pork and beef. Agricultural, environmental and socioeconomic factors also have been associated with rates of Salmonella infection. However, to our knowledge, these factors have not been modeled together at the community-level to improve our understanding of whether rates of salmonellosis are variable across communities defined by differing factors. To address this knowledge gap, we obtained data on culture-confirmed Salmonella Typhimurium, S. Enteritidis, S. Newport and S. Javiana cases (2004-2010; n=14,297) from the Foodborne Diseases Active Surveillance Network (FoodNet), and socioeconomic, environmental and agricultural data from the 2010 Census of Population and Housing, the 2011 American Community Survey, and the 2007 U.S. Census of Agriculture. We linked data by zip code and derived incidence rate ratios using negative binomial regressions. Multiple community-level factors were associated with salmonellosis rates; however, our findings varied by state. For example, in Georgia (Incidence Rate Ratio (IRR)=1.01; 95% Confidence Interval (CI)=1.005-1.015) Maryland (IRR=1.01; 95% CI=1.003-1.015) and Tennessee (IRR=1.01; 95% CI=1.002-1.012), zip codes characterized by greater rurality had higher rates of S. Newport infections. The presence of broiler chicken operations, dairy operations and cattle operations in a zip code also was associated with significantly higher rates of infection with at least one serotype in states that are leading producers of these animal products. For instance, in Georgia and Tennessee, rates of S. Enteritidis infection were 48% (IRR=1.48; 95% CI=1.12-1.95) and 46% (IRR=1.46; 95% CI=1.17-1.81) higher in zip codes with broiler chicken operations compared to those without these operations. In Maryland, New Mexico and Tennessee, higher poverty levels in zip codes were associated with higher rates of infection with one or more Salmonella serotypes. In Georgia and Tennessee, zip codes with higher percentages of the population composed of African Americans had significantly higher rates of infection with one or more Salmonella serotypes. In summary, our findings show that community-level agricultural, environmental and socioeconomic factors may be important with regard to rates of infection with Salmonella Typhimurium, Enteritidis, Newport and Javiana., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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37. Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria.
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Sundararaman SA, Plenderleith LJ, Liu W, Loy DE, Learn GH, Li Y, Shaw KS, Ayouba A, Peeters M, Speede S, Shaw GM, Bushman FD, Brisson D, Rayner JC, Sharp PM, and Hahn BH
- Subjects
- Animals, Biological Evolution, Genetic Variation, Humans, Multigene Family, Phylogeny, Plasmodium genetics, Real-Time Polymerase Chain Reaction, Evolution, Molecular, Genome, Protozoan genetics, Malaria, Falciparum parasitology, Pan troglodytes parasitology, Plasmodium falciparum genetics
- Abstract
African apes harbour at least six Plasmodium species of the subgenus Laverania, one of which gave rise to human Plasmodium falciparum. Here we use a selective amplification strategy to sequence the genome of chimpanzee parasites classified as Plasmodium reichenowi and Plasmodium gaboni based on the subgenomic fragments. Genome-wide analyses show that these parasites indeed represent distinct species, with no evidence of cross-species mating. Both P. reichenowi and P. gaboni are 10-fold more diverse than P. falciparum, indicating a very recent origin of the human parasite. We also find a remarkable Laverania-specific expansion of a multigene family involved in erythrocyte remodelling, and show that a short region on chromosome 4, which encodes two essential invasion genes, was horizontally transferred into a recent P. falciparum ancestor. Our results validate the selective amplification strategy for characterizing cryptic pathogen species, and reveal evolutionary events that likely predisposed the precursor of P. falciparum to colonize humans.
- Published
- 2016
- Full Text
- View/download PDF
38. Climate change, extreme events and increased risk of salmonellosis in Maryland, USA: Evidence for coastal vulnerability.
- Author
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Jiang C, Shaw KS, Upperman CR, Blythe D, Mitchell C, Murtugudde R, Sapkota AR, and Sapkota A
- Subjects
- Altitude, Geography, Hot Temperature, Humans, Incidence, Maryland epidemiology, Rain, Salmonella Infections microbiology, Snow, Climate Change, Salmonella Infections epidemiology
- Abstract
Background: Salmonella is a leading cause of acute gastroenteritis worldwide. Patterns of salmonellosis have been linked to weather events. However, there is a dearth of data regarding the association between extreme events and risk of salmonellosis, and how this risk may disproportionately impact coastal communities., Methods: We obtained Salmonella case data from the Maryland Foodborne Diseases Active Surveillance Network (2002-2012), and weather data from the National Climatic Data Center (1960-2012). We developed exposure metrics related to extreme temperature and precipitation events using a 30 year baseline (1960-1989) and linked them with county-level salmonellosis data. Data were analyzed using negative binomial Generalized Estimating Equations., Results: We observed a 4.1% increase in salmonellosis risk associated with a 1 unit increase in extreme temperature events (incidence rate ratio (IRR):1.041; 95% confidence interval (CI):1.013-1.069). This increase in risk was more pronounced in coastal versus non-coastal areas (5.1% vs 1.5%). Likewise, we observed a 5.6% increase in salmonellosis risk (IRR:1.056; CI:1.035-1.078) associated with a 1 unit increase in extreme precipitation events, with the impact disproportionately felt in coastal areas (7.1% vs 3.6%)., Conclusions: To our knowledge, this is the first empirical evidence showing that extreme temperature/precipitation events-that are expected to be more frequent and intense in coming decades-are disproportionately impacting coastal communities with regard to salmonellosis. Adaptation strategies need to account for this differential burden, particularly in light of ever increasing coastal populations., (Copyright © 2015. Published by Elsevier Ltd.)
- Published
- 2015
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39. Hepatitis C virus RNA functionally sequesters miR-122.
- Author
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Luna JM, Scheel TK, Danino T, Shaw KS, Mele A, Fak JJ, Nishiuchi E, Takacs CN, Catanese MT, de Jong YP, Jacobson IM, Rice CM, and Darnell RB
- Subjects
- Argonaute Proteins metabolism, Base Sequence, Cell Line, Tumor, Eukaryotic Initiation Factors metabolism, Hepacivirus genetics, Humans, Liver metabolism, Liver virology, Molecular Sequence Data, RNA, Viral chemistry, Virus Replication, Hepacivirus metabolism, Hepatitis C metabolism, Hepatitis C virology, MicroRNAs metabolism, RNA, Viral metabolism
- Abstract
Hepatitis C virus (HCV) uniquely requires the liver-specific microRNA-122 for replication, yet global effects on endogenous miRNA targets during infection are unexplored. Here, high-throughput sequencing and crosslinking immunoprecipitation (HITS-CLIP) experiments of human Argonaute (AGO) during HCV infection showed robust AGO binding on the HCV 5'UTR at known and predicted miR-122 sites. On the human transcriptome, we observed reduced AGO binding and functional mRNA de-repression of miR-122 targets during virus infection. This miR-122 "sponge" effect was relieved and redirected to miR-15 targets by swapping the miRNA tropism of the virus. Single-cell expression data from reporters containing miR-122 sites showed significant de-repression during HCV infection depending on expression level and site number. We describe a quantitative mathematical model of HCV-induced miR-122 sequestration and propose that such miR-122 inhibition by HCV RNA may result in global de-repression of host miR-122 targets, providing an environment fertile for the long-term oncogenic potential of HCV., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
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40. Recreational swimmers' exposure to Vibrio vulnificus and Vibrio parahaemolyticus in the Chesapeake Bay, Maryland, USA.
- Author
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Shaw KS, Sapkota AR, Jacobs JM, He X, and Crump BC
- Subjects
- Bays, Environmental Exposure, Humans, Maryland, Salinity, Temperature, Swimming, Vibrio parahaemolyticus isolation & purification, Vibrio vulnificus isolation & purification, Water Microbiology
- Abstract
Vibrio vulnificus and Vibrio parahaemolyticus are ubiquitous in the marine-estuarine environment, but the magnitude of human non-ingestion exposure to these waterborne pathogens is largely unknown. We evaluated the magnitude of dermal exposure to V. vulnificus and V. parahaemolyticus among swimmers recreating in Vibrio-populated waters by conducting swim studies at four swimming locations in the Chesapeake Bay in 2009 and 2011. Volunteers (n=31) swam for set time periods, and surface water (n=25) and handwash (n=250) samples were collected. Samples were analyzed for Vibrio concentrations using quantitative PCR. Linear and logistic regressions were used to evaluate factors associated with recreational exposures. Mean surface water V. vulnificus and V. parahaemolyticus concentrations were 1128CFUmL(-1) (95% confidence interval (CI): 665.6, 1591.4) and 18CFUmL(-1) (95% CI: 9.8, 26.1), respectively, across all sampling locations. Mean Vibrio concentrations in handwash samples (V. vulnificus, 180CFUcm(-2) (95% CI: 136.6, 222.5); V. parahaemolyticus, 3CFUcm(-2) (95% CI: 2.4, 3.7)) were significantly associated with Vibrio concentrations in surface water (V. vulnificus, p<0.01; V. parahaemolyticus, p<0.01), but not with salinity or temperature (V. vulnificus, p=0.52, p=0.17; V. parahaemolyticus, p=0.82, p=0.06). Handwashing reduced V. vulnificus and V. parahaemolyticus on subjects' hands by approximately one log (93.9%, 89.4%, respectively). It can be concluded that when Chesapeake Bay surface waters are characterized by elevated concentrations of Vibrio, swimmers and individuals working in those waters could experience significant dermal exposures to V. vulnificus and V. parahaemolyticus, increasing their risk of infection., (Copyright © 2014 Elsevier Ltd. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
41. Impact of Hurricane Irene on Vibrio vulnificus and Vibrio parahaemolyticus concentrations in surface water, sediment, and cultured oysters in the Chesapeake Bay, MD, USA.
- Author
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Shaw KS, Jacobs JM, and Crump BC
- Abstract
To determine if a storm event (i.e., high winds, large volumes of precipitation) could alter concentrations of Vibrio vulnificus and V. parahaemolyticus in aquacultured oysters (Crassostrea virginica) and associated surface water and sediment, this study followed a sampling timeline before and after Hurricane Irene impacted the Chesapeake Bay estuary in late August 2011. Aquacultured oysters were sampled from two levels in the water column: surface (0.3 m) and near-bottom (just above the sediment). Concentrations of each Vibrio spp. and associated virulence genes were measured in oysters with a combination of real-time PCR and most probable number (MPN) enrichment methods, and in sediment and surface water with real-time PCR. While concentration shifts of each Vibrio species were apparent post-storm, statistical tests indicated no significant change in concentration for either Vibrio species by location (surface or near bottom oysters) or date sampled (oyster tissue, surface water, and sediment concentrations). V. vulnificus in oyster tissue was correlated with total suspended solids (r = 0.41, P = 0.04), and V. vulnificus in sediment was correlated with secchi depth (r = -0.93, P <0.01), salinity (r = -0.46, P = 0.02), tidal height (r = -0.45, P = 0.03), and surface water V. vulnificus (r = 0.98, P <0.01). V. parahaemolyticus in oyster tissue did not correlate with environmental measurements, but V. parahaemolyticus in sediment and surface water correlated with several measurements including secchi depth [r = -0.48, P = 0.02 (sediment); r = -0.97, P <0.01 (surface water)] and tidal height [r = -0.96, P <0.01 (sediment), r = -0.59, P <0.01 (surface water)]. The concentrations of Vibrio spp. were higher in oysters relative to other studies (average V. vulnificus 4 × 10(5) MPN g(-1), V. parahaemolyticus 1 × 10(5) MPN g(-1)), and virulence-associated genes were detected in most oyster samples. This study provides a first estimate of storm-related Vibrio density changes in oyster tissues, sediment, and surface water at an aquaculture facility in the Chesapeake Bay.
- Published
- 2014
- Full Text
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42. Antimicrobial susceptibility of Vibrio vulnificus and Vibrio parahaemolyticus recovered from recreational and commercial areas of Chesapeake Bay and Maryland Coastal Bays.
- Author
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Shaw KS, Rosenberg Goldstein RE, He X, Jacobs JM, Crump BC, and Sapkota AR
- Subjects
- Anti-Infective Agents pharmacology, Bays, Drug Resistance, Bacterial, Maryland, Microbial Sensitivity Tests, Vibrio parahaemolyticus genetics, Vibrio vulnificus genetics, Vibrio Infections drug therapy
- Abstract
Vibrio vulnificus and V. parahaemolyticus in the estuarine-marine environment are of human health significance and may be increasing in pathogenicity and abundance. Vibrio illness originating from dermal contact with Vibrio laden waters or through ingestion of seafood originating from such waters can cause deleterious health effects, particularly if the strains involved are resistant to clinically important antibiotics. The purpose of this study was to evaluate antimicrobial susceptibility among these pathogens. Surface-water samples were collected from three sites of recreational and commercial importance from July to September 2009. Samples were plated onto species-specific media and resulting V. vulnificus and V. parahaemolyticus strains were confirmed using polymerase chain reaction assays and tested for antimicrobial susceptibility using the Sensititre® microbroth dilution system. Descriptive statistics, Friedman two-way Analysis of Variance (ANOVA) and Kruskal-Wallis one-way ANOVA were used to analyze the data. Vibrio vulnificus (n = 120) and V. parahaemolyticus (n = 77) were isolated from all sampling sites. Most isolates were susceptible to antibiotics recommended for treating Vibrio infections, although the majority of isolates expressed intermediate resistance to chloramphenicol (78% of V. vulnificus, 96% of V. parahaemolyticus). Vibrio parahaemolyticus also demonstrated resistance to penicillin (68%). Sampling location or month did not significantly impact V. parahaemolyticus resistance patterns, but V. vulnificus isolates from St. Martin's River had lower overall intermediate resistance than that of the other two sampling sites during the month of July (p = 0.0166). Antibiotics recommended to treat adult Vibrio infections were effective in suppressing bacterial growth, while some antibiotics recommended for pediatric treatment were not effective against some of the recovered isolates. To our knowledge, these are the first antimicrobial susceptibility data of V. vulnificus and V. parahaemolyticus recovered from the Chesapeake Bay. These data can serve as a baseline against which future studies can be compared to evaluate whether susceptibilities change over time.
- Published
- 2014
- Full Text
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43. African origin of the malaria parasite Plasmodium vivax.
- Author
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Liu W, Li Y, Shaw KS, Learn GH, Plenderleith LJ, Malenke JA, Sundararaman SA, Ramirez MA, Crystal PA, Smith AG, Bibollet-Ruche F, Ayouba A, Locatelli S, Esteban A, Mouacha F, Guichet E, Butel C, Ahuka-Mundeke S, Inogwabini BI, Ndjango JB, Speede S, Sanz CM, Morgan DB, Gonder MK, Kranzusch PJ, Walsh PD, Georgiev AV, Muller MN, Piel AK, Stewart FA, Wilson ML, Pusey AE, Cui L, Wang Z, Färnert A, Sutherland CJ, Nolder D, Hart JA, Hart TB, Bertolani P, Gillis A, LeBreton M, Tafon B, Kiyang J, Djoko CF, Schneider BS, Wolfe ND, Mpoudi-Ngole E, Delaporte E, Carter R, Culleton RL, Shaw GM, Rayner JC, Peeters M, Hahn BH, and Sharp PM
- Subjects
- Africa, Animals, Asia, Evolution, Molecular, Phylogeny, Plasmodium vivax pathogenicity, Malaria physiopathology, Plasmodium vivax classification, Plasmodium vivax genetics
- Abstract
Plasmodium vivax is the leading cause of human malaria in Asia and Latin America but is absent from most of central Africa due to the near fixation of a mutation that inhibits the expression of its receptor, the Duffy antigen, on human erythrocytes. The emergence of this protective allele is not understood because P. vivax is believed to have originated in Asia. Here we show, using a non-invasive approach, that wild chimpanzees and gorillas throughout central Africa are endemically infected with parasites that are closely related to human P. vivax. Sequence analyses reveal that ape parasites lack host specificity and are much more diverse than human parasites, which form a monophyletic lineage within the ape parasite radiation. These findings indicate that human P. vivax is of African origin and likely selected for the Duffy-negative mutation. All extant human P. vivax parasites are derived from a single ancestor that escaped out of Africa.
- Published
- 2014
- Full Text
- View/download PDF
44. Production of Plasmodium falciparum gametocytes in vitro.
- Author
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Saliba KS and Jacobs-Lorena M
- Subjects
- Animals, Cell Culture Techniques, Erythrocytes parasitology, Erythrocytes pathology, Humans, Life Cycle Stages, Plasmodium falciparum isolation & purification, Germ Cells growth & development, Plasmodium falciparum physiology
- Abstract
Production of gametocytes in vitro is essential for studies of Plasmodium falciparum sexual stages. Here, we describe procedures for the high-yield production and fractionation of P. falciparum gametocytes stages I to V.
- Published
- 2013
- Full Text
- View/download PDF
45. A rev1-vpu polymorphism unique to HIV-1 subtype A and C strains impairs envelope glycoprotein expression from rev-vpu-env cassettes and reduces virion infectivity in pseudotyping assays.
- Author
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Kraus MH, Parrish NF, Shaw KS, Decker JM, Keele BF, Salazar-Gonzalez JF, Grayson T, McPherson DT, Ping LH, Anderson JA, Swanstrom R, Williamson C, Shaw GM, and Hahn BH
- Subjects
- Amino Acid Sequence, Base Sequence, Cell Line, Human Immunodeficiency Virus Proteins metabolism, Humans, Molecular Sequence Data, Protein Biosynthesis, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Viral Regulatory and Accessory Proteins metabolism, rev Gene Products, Human Immunodeficiency Virus metabolism, HIV-1 genetics, HIV-1 pathogenicity, Human Immunodeficiency Virus Proteins genetics, Polymorphism, Genetic, Viral Regulatory and Accessory Proteins genetics, env Gene Products, Human Immunodeficiency Virus biosynthesis, rev Gene Products, Human Immunodeficiency Virus genetics
- Abstract
Functional studies of HIV-1 envelope glycoproteins (Envs) commonly include the generation of pseudoviruses, which are produced by co-transfection of rev-vpu-env cassettes with an env-deficient provirus. Here, we describe six Env constructs from transmitted/founder HIV-1 that were defective in the pseudotyping assay, although two produced infectious virions when expressed from their cognate proviruses. All of these constructs exhibited an unusual gene arrangement in which the first exon of rev (rev1) and vpu were in the same reading frame without an intervening stop codon. Disruption of the rev1-vpu fusion gene by frameshift mutation, stop codon, or abrogation of the rev initiation codon restored pseudovirion infectivity. Introduction of the fusion gene into wildtype Env cassettes severely compromised their function. The defect was not due to altered env and rev transcription or a dominant negative effect of the expressed fusion protein, but seemed to be caused by inefficient translation at the env initiation codon. Although the rev1-vpu polymorphism affects Env expression only in vitro, it can cause problems in studies requiring Env complementation, such as analyses of co-receptor usage and neutralization properties, since 3% of subtype A, 20% of subtype C and 5% of CRF01_A/E viruses encode the fusion gene. A solution is to eliminate the rev initiation codon when amplifying rev-vpu-env cassettes since this increases Env expression irrespective of the presence of the polymorphism., (Copyright 2009 Elsevier Inc. All rights reserved.)
- Published
- 2010
- Full Text
- View/download PDF
46. Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection.
- Author
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Salazar-Gonzalez JF, Salazar MG, Keele BF, Learn GH, Giorgi EE, Li H, Decker JM, Wang S, Baalwa J, Kraus MH, Parrish NF, Shaw KS, Guffey MB, Bar KJ, Davis KL, Ochsenbauer-Jambor C, Kappes JC, Saag MS, Cohen MS, Mulenga J, Derdeyn CA, Allen S, Hunter E, Markowitz M, Hraber P, Perelson AS, Bhattacharya T, Haynes BF, Korber BT, Hahn BH, and Shaw GM
- Subjects
- CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes virology, Female, HIV-1 classification, Humans, Likelihood Functions, Macrophages immunology, Macrophages virology, Male, Models, Theoretical, Mutation, Phylogeny, Receptors, CCR5 immunology, Virion genetics, Virus Replication genetics, Virus Replication immunology, Evolution, Molecular, Genome, Viral, HIV Infections genetics, HIV Infections immunology, HIV-1 genetics, HIV-1 immunology, Phenotype
- Abstract
Identification of full-length transmitted HIV-1 genomes could be instrumental in HIV-1 pathogenesis, microbicide, and vaccine research by enabling the direct analysis of those viruses actually responsible for productive clinical infection. We show in 12 acutely infected subjects (9 clade B and 3 clade C) that complete HIV-1 genomes of transmitted/founder viruses can be inferred by single genome amplification and sequencing of plasma virion RNA. This allowed for the molecular cloning and biological analysis of transmitted/founder viruses and a comprehensive genome-wide assessment of the genetic imprint left on the evolving virus quasispecies by a composite of host selection pressures. Transmitted viruses encoded intact canonical genes (gag-pol-vif-vpr-tat-rev-vpu-env-nef) and replicated efficiently in primary human CD4(+) T lymphocytes but much less so in monocyte-derived macrophages. Transmitted viruses were CD4 and CCR5 tropic and demonstrated concealment of coreceptor binding surfaces of the envelope bridging sheet and variable loop 3. 2 mo after infection, transmitted/founder viruses in three subjects were nearly completely replaced by viruses differing at two to five highly selected genomic loci; by 12-20 mo, viruses exhibited concentrated mutations at 17-34 discrete locations. These findings reveal viral properties associated with mucosal HIV-1 transmission and a limited set of rapidly evolving adaptive mutations driven primarily, but not exclusively, by early cytotoxic T cell responses.
- Published
- 2009
- Full Text
- View/download PDF
47. Antiplatelet aggregation coumarins from the leaves of Murraya omphalocarpa.
- Author
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Chia YC, Chang FR, Wang JC, Wu CC, Chiang MY, Lan YH, Chen KS, and Wu YC
- Subjects
- Animals, Arachidonic Acid pharmacology, Blood Platelets drug effects, Collagen pharmacology, Coumarins chemistry, Models, Molecular, Murraya drug effects, Plant Leaves drug effects, Platelet Activating Factor pharmacology, Platelet Aggregation drug effects, Platelet Aggregation Inhibitors chemistry, Rabbits, Thrombin pharmacology, X-Ray Diffraction, Coumarins isolation & purification, Murraya chemistry, Plant Leaves chemistry, Platelet Aggregation Inhibitors isolation & purification
- Abstract
Using a bioactivity-guided fractionation method, two coumarins: minumicroline acetonide (1) and epimurpaniculol senecioate (2), were isolated from the leaves of Murraya omphalocarpa Hayata (Rutaceae). Compound 1 had been previously synthesized and was now isolated from natural sources for the first time, and compound 2, possessing a negative optical rotation value, is new. The structures and their stereochemistry were fully elucidated on the basis of spectroscopic and X-ray crystallographic techniques. Both compounds 1 and 2 are active in the antiplatelet aggregation assay. Interestingly, the possible acetonide artifact 1 displayed significant antiplatelet aggregation induced not only by AA and collagen but also by platelet activating factor (PAF).
- Published
- 2008
- Full Text
- View/download PDF
48. Genetic diversity and phylogeographic clustering of SIVcpzPtt in wild chimpanzees in Cameroon.
- Author
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Van Heuverswyn F, Li Y, Bailes E, Neel C, Lafay B, Keele BF, Shaw KS, Takehisa J, Kraus MH, Loul S, Butel C, Liegeois F, Yangda B, Sharp PM, Mpoudi-Ngole E, Delaporte E, Hahn BH, and Peeters M
- Subjects
- Animals, Base Sequence, Cameroon epidemiology, Cluster Analysis, Feces virology, Genome, Viral genetics, Molecular Epidemiology, Molecular Sequence Data, Pan troglodytes, Phylogeny, Sequence Analysis, DNA, Simian Immunodeficiency Virus isolation & purification, Genetic Variation, Geography, Simian Acquired Immunodeficiency Syndrome epidemiology, Simian Acquired Immunodeficiency Syndrome virology, Simian Immunodeficiency Virus classification, Simian Immunodeficiency Virus genetics
- Abstract
It is now well established that the clade of simian immunodeficiency viruses (SIVs) infecting west central African chimpanzees (Pan troglodytes troglodytes) and western gorillas (Gorilla gorilla gorilla) comprises the progenitors of human immunodeficiency virus type 1 (HIV-1). In this study, we have greatly expanded our previous molecular epidemiological survey of SIVcpz in wild chimpanzees in Cameroon. The new results confirm a wide but uneven distribution of SIVcpzPtt in P. t. troglodytes throughout southern Cameroon and indicate the absence of SIVcpz infection in Pan troglodytes vellerosus. Analyzing 725 fecal samples from 15 field sites, we obtained partial nucleotide sequences from 16 new SIVcpzPtt strains and determined full-length sequences for two of these. Phylogenetic analyses of these new viruses confirmed the previously reported phylogeographic clustering of SIVcpzPtt lineages, with viruses related to the ancestors of HIV-1 groups M and N circulating exclusively in southeastern and south central P. t. troglodytes communities, respectively. Importantly, the SIVcpzPtt strains from the southeastern corner of Cameroon represent a relatively isolated clade indicating a defined geographic origin of the chimpanzee precursor of HIV-1 group M. Since contacts between humans and apes continue, the possibility of ongoing transmissions of SIV from chimpanzees (or gorillas) to humans has to be considered. In this context, our finding of distinct SIVcpzPtt envelope V3 sequence clades suggests that these peptides may be useful for the serological differentiation of SIVcpzPtt and HIV-1 infections, and thus the diagnosis of new cross-species transmissions if they occurred.
- Published
- 2007
- Full Text
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49. Surface modification and characterization of chitosan or PLGA membrane with laminin by chemical and oxygen plasma treatment for neural regeneration.
- Author
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Huang YC, Huang CC, Huang YY, and Chen KS
- Subjects
- Animals, Cell Adhesion, Cell Proliferation, Cells, Cultured, Female, Materials Testing, Oxygen, Polylactic Acid-Polyglycolic Acid Copolymer, Rats, Rats, Wistar, Schwann Cells cytology, Schwann Cells physiology, Spectroscopy, Fourier Transform Infrared, Spectrum Analysis, Surface Properties, Tissue Engineering, X-Rays, Biocompatible Materials chemistry, Chitosan chemistry, Lactic Acid chemistry, Laminin chemistry, Nerve Regeneration physiology, Polyglycolic Acid chemistry, Polymers chemistry
- Abstract
Attachment to and proliferation on the substrate are deemed important considerations when Schwann cells (SCs) are to be seeded in synthetic nerve grafts. Good attachment is a prerequisite for the SCs to survive. Fast proliferation will yield large numbers of SCs in a short time, which appears to be promising for stimulating peripheral nerve regeneration. However, surface properties are the dominating factor in influencing the interactions between cells and synthetic nerve grafts. The aim of this study was to investigate the surface effects of laminin modified PLGA and chitosan membranes after chemical method and plasma treatment. Laminin, the extracellular matrix protein, is a permissive protein for SCs adhesion used in neural regeneration. The surface properties of laminin modified membranes were assayed by BCA, FTIR and XPS analysis. Results showed that laminin was covalently bonded onto the surface of both PLGA and chitosan membranes either by chemical method or by oxygen plasma treatment. The cell affinity of the laminin modified membranes was verified by Schwann cells culturing. Our results also indicate that oxygen plasma is indeed a better method to incorporate laminin onto the surface of membrane. Laminin-modified chitosan membrane significantly increases SCs attachment and affinity for directing peripheral nerve regeneration., (Copyright 2007 Wiley Periodicals, Inc.)
- Published
- 2007
- Full Text
- View/download PDF
50. Effect of isoquinoline alkaloids of different structural types on antiplatelet aggregation in vitro.
- Author
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Chia YC, Chang FR, Wu CC, Teng CM, Chen KS, and Wu YC
- Subjects
- Alkaloids chemistry, Alkaloids isolation & purification, Animals, Blood Platelets drug effects, Cells, Cultured, Isoquinolines chemistry, Isoquinolines isolation & purification, Plant Extracts chemistry, Plant Extracts isolation & purification, Plant Extracts pharmacology, Plants chemistry, Platelet Aggregation Inhibitors chemistry, Platelet Aggregation Inhibitors isolation & purification, Rabbits, Alkaloids pharmacology, Isoquinolines pharmacology, Platelet Aggregation Inhibitors pharmacology
- Abstract
Forty-one isoquinoline alkaloids were tested for antiplatelet aggregation effects. Among them, (-)-discretamine (6), protopine (7), ochotensimine (18), O-methylarmepavinemethine (23), lindoldhamine (25), isotetrandrine (26), thalicarpine (27), papaverine (28), and D-(+)- N-norarmepavine (32) exhibited significant inhibitory activity towards adenosine 5'-diphosphate (ADP)-, arachidonic acid (AA)-, collagen-, and/or platelet-activating factor (PAF)-induced platelet aggregation. The results are discussed on the basis of structure-activity relationships.
- Published
- 2006
- Full Text
- View/download PDF
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