17 results on '"Shamieh, Said El"'
Search Results
2. The genetic landscape of inherited retinal dystrophies in Arabs
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Jaffal, Lama, Joumaa, Hawraa, Noureldine, Jinane, Banjak, Malak, Ibrahim, Mariam, Mrad, Zamzam, Salami, Ali, and Shamieh, Said El
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- 2023
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3. Genome-wide meta-analysis points to CTC1 and ZNF676 as genes regulating telomere homeostasis in humans
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Mangino, Massimo, Hwang, Shih-Jen, Spector, Timothy D, Hunt, Steven C, Kimura, Masayuki, Fitzpatrick, Annette L, Christiansen, Lene, Petersen, Inge, Elbers, Clara C, Harris, Tamara, Chen, Wei, Srinivasan, Sathanur R, Kark, Jeremy D, Benetos, Athanase, Shamieh, Said El, Visvikis-Siest, Sophie, Christensen, Kaare, Berenson, Gerald S, Valdes, Ana M, Viñuela, Ana, Garcia, Melissa, Arnett, Donna K, Broeckel, Ulrich, Province, Michael A, Pankow, James S, Kammerer, Candace, Liu, Yongmei, Nalls, Michael, Tishkoff, Sarah, Thomas, Fridtjof, Ziv, Elad, Psaty, Bruce M, Bis, Joshua C, Rotter, Jerome I, Taylor, Kent D, Smith, Erin, Schork, Nicholas J, Levy, Daniel, and Aviv, Abraham
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Biological Sciences ,Genetics ,Aging ,Human Genome ,2.1 Biological and endogenous factors ,Generic health relevance ,Genome-Wide Association Study ,Humans ,Kruppel-Like Transcription Factors ,Telomere ,Telomere Homeostasis ,Telomere-Binding Proteins ,Medical and Health Sciences ,Genetics & Heredity - Abstract
Leukocyte telomere length (LTL) is associated with a number of common age-related diseases and is a heritable trait. Previous genome-wide association studies (GWASs) identified two loci on chromosomes 3q26.2 (TERC) and 10q24.33 (OBFC1) that are associated with the inter-individual LTL variation. We performed a meta-analysis of 9190 individuals from six independent GWAS and validated our findings in 2226 individuals from four additional studies. We confirmed previously reported associations with OBFC1 (rs9419958 P = 9.1 × 10(-11)) and with the telomerase RNA component TERC (rs1317082, P = 1.1 × 10(-8)). We also identified two novel genomic regions associated with LTL variation that map near a conserved telomere maintenance complex component 1 (CTC1; rs3027234, P = 3.6 × 10(-8)) on chromosome17p13.1 and zinc finger protein 676 (ZNF676; rs412658, P = 3.3 × 10(-8)) on 19p12. The minor allele of rs3027234 was associated with both shorter LTL and lower expression of CTC1. Our findings are consistent with the recent observations that point mutations in CTC1 cause short telomeres in both Arabidopsis and humans affected by a rare Mendelian syndrome. Overall, our results provide novel insights into the genetic architecture of inter-individual LTL variation in the general population.
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- 2012
4. Additional file 1 of The genetic landscape of inherited retinal dystrophies in Arabs
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Jaffal, Lama, Joumaa, Hawraa, Noureldine, Jinane, Banjak, Malak, Ibrahim, Mariam, Mrad, Zamzam, Salami, Ali, and Shamieh, Said El
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Supplementary Material 1
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- 2023
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5. G in FAM13A Is a Trans-Ethnic Genetic Variant Interacting with Vitamin D Levels to Affect Chronic Obstructive Pulmonary Disease
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Shamieh, Said El, Salami, Ali, Fawaz, Mirna, Jounblat, Rania, Waked, Mirna, and Fakhoury, Rajaa
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meta-analysis ,single nucleotide polymorphism ,interaction ,vitamin D ,chronic obstructive pulmonary disease - Abstract
(1) Background and objectives: Chronic obstructive pulmonary disease (COPD) is a leading cause of mortality throughout the world. In addition to genetics, increasing evidence suggests that Vitamin D (VitD) might be involved in different pathogenic mechanisms in COPD. Furthermore, the prevalence of VitD insufficiency is exceptionally high in COPD patients and increases with the severity. Based on the above, we first tested the relation between the top 10 single nucleotide polymorphisms from genome-wide association studies and the risk of COPD. Then, we investigated whether VitD levels might also have a role in COPD. A meta-analysis followed, combining our participants with previously published European and non-European populations (15,716 cases and 48,107 controls). (2) Methods: 631 Lebanese participants were recruited, of which ~28% were affected with COPD. Demographic and clinical data were collected, and DNA was genotyped using Kompetitive allele-specific PCR (KASPTM). Adjusted multiple logistic regression models were used. Bonferroni corrections were also applied. The statistical power was also assessed. (3) Results: Both rs6837671A>, G in FAM13A and VitD levels were significantly associated with increased risk of COPD (OR = 1.75, p = 0.01, and OR = 3.10, p <, 0.001 respectively). An interaction between rs6837671A>, G in FAM13A and VitD levels, which increased COPD risk, was found (OR = 3.35 and p <, 0.001). The meta-analysis showed that rs6837671G increases COPD risk in populations from different origins, Europeans, Asians, and now in Middle-Eastern. (4) Conclusions: Our results suggest that rs6837671A>, G in FAM13A is a trans-ethnic genetic variant that interact with VitD to affect COPD.
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- 2021
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6. Is There a Link Between Nutrition, Genetics, and Cardiovascular Disease?
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Ghoch, Marwan El, primary and Shamieh, Said El, additional
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- 2020
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7. Peripheral blood mononuclear cells extracts VEGF protein levels and VEGF mRNA: Associations with inflammatory molecules in a healthy population
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Gorenjak, Vesna, Vance, Dwaine R., Petrelis, Alexandros M., Stathopoulou, Maria G., Dadé, Sébastien, Shamieh, Said El, Murray, Helena, Masson, Christine, Lamont, John, Fitzgerald, Peter, Visvikis-Siest, Sophie, Interactions Gène-Environnement en Physiopathologie Cardio-Vasculaire (IGE-PCV), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL), Randox Laboratories Limited [Crumlin, Irlande du Nord], Department of Medical Laboratory Technology [Beyrouth, Liban], Faculty of Health Sciences [Beyrouth, Liban], Beirut Arab University [Beyrouth, Liban] (BAU)-Beirut Arab University [Beyrouth, Liban] (BAU), Department of Internal Medicine and Geriatrics [Vandoeuvre-lès-Nancy], Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Technopôle de Nancy-Brabois [Vandoeuvre-lès-Nancy], VG was partially funded by the 'Région Lorraine'., IMPACT GEENAGE, ANR-15-IDEX-0004,LUE (ISITE),Lorraine Université d'Excellence(2016), ANR-15-RHUS-0004,FIGHT-HF,Combattre l'insuffisance cardiaque(2015), European Project, Bodescot, Myriam, ISITE - Isite LUE - - LUE2015 - ANR-15-IDEX-0004 - IDEX - VALID, Combattre l'insuffisance cardiaque - - FIGHT-HF2015 - ANR-15-RHUS-0004 - RHUS - VALID, PO FEDER-FSE Lorraine et Massif de Vosges 2014-2020 - INCOMING, and ANR-15-IDEX-0004,LUE,Isite LUE(2015)
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Computer and Information Sciences ,[SDV.IMM] Life Sciences [q-bio]/Immunology ,Physiology ,Protein Extraction ,Science ,Immune Cells ,Immunology ,Cancer Treatment ,Pathology and Laboratory Medicine ,Research and Analysis Methods ,Infographics ,Monocytes ,White Blood Cells ,Signs and Symptoms ,Endocrinology ,Diagnostic Medicine ,Animal Cells ,Immune Physiology ,Growth Factors ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Medicine and Health Sciences ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Immune Response ,Inflammation ,Extraction Techniques ,Innate Immune System ,Blood Cells ,Endocrine Physiology ,Interleukins ,Data Visualization ,Biology and Life Sciences ,Cell Biology ,Molecular Development ,Oncology ,Immune System ,Medicine ,Cytokines ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,Cellular Types ,Graphs ,Research Article ,Developmental Biology - Abstract
BackgroundVascular endothelial growth factor (VEGF) is a signal protein, implicated in various physiological and pathophysiological processes together with other common inflammatory biomarkers. However, their associations have not yet been fully elucidated. In the present study, we investigated associations between VEGF and four specific VEGF mRNA isoforms with levels of 11 inflammation molecules, derived from peripheral blood mononuclear cells (PBMCs) extracts.MethodsHealthy participants from the STANISLAS Family Study (n = 285) were included. Levels of VEGF (four mRNA isoforms and protein levels) and inflammatory molecules (IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, INF-γ, TNF-α, MCP-1, EGF) were measured in PBMCs extracts. Multiple regression analyses were performed, adjusted for age and gender.ResultsThe analyses revealed significant associations between VEGF protein levels and levels of IL-4 (β = 0.028, P = 0.013), MCP-1 (β = 0.015, PConclusionsTo our knowledge, the present study represents the first investigation that successfully demonstrates links between VEGF protein levels and inflammatory molecules levels derived from PBMCs extracts and identifies associations between specific VEGF mRNA isoforms and inflammatory molecules.ImpactThese findings provide novel insights that may assist in the development of new tissue and mRNA isoform specific measurements of VEGF levels, which may positively contribute to predicting the risk of common complex diseases and response of currently used anti-VEGF agents, and developing of novel targeted therapies for VEGF-related pathophysiology.
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- 2019
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8. APOE genotypes in Lebanon: distribution and association with hypercholesterolemia and Alzheimer's disease
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Shamieh, Said El, primary, Costanian, Christy, additional, Kassir, Rayan, additional, Visvkis-Siest, Sophie, additional, and Bissar-Tadmouri, Nisrine, additional
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- 2019
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9. CONCEPT MAPPING VERSUS TRADITIONAL TEACHING METHOD ON HEALTH SCIENCES' STUDENTS' SCORE.
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Fawaz, Mirna, Khatib, Ayman El, Kassas, Germine El, and Shamieh, Said El
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CONCEPT mapping ,TEACHING ,LEARNING ,ACADEMIC achievement ,MEDICAL science education - Abstract
In the recent years, health care systems have been dynamically changing which demanded modifications in health care education. Current educational models are becoming more and more obsolete in enhancing the professional level of both teachers and students. Concepts maps are effective tools in processing large amounts of information, comprehending new concepts, as well as in generating information and amplifying creativity levels. The aim of this study is to compare the concept mapping versus traditional teaching method on Health Sciences' students' score. A Quasi-experimental design was implemented in the study. The study revealed that there was a significant difference between learning by traditional method and by concept mapping that can be a predictor of better academic achievement. Concept maps prove to be an efficient teaching-learning method in health sciences education. [ABSTRACT FROM AUTHOR]
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- 2020
10. Conference Scene: Systems biology and personalized health science and translation
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Siest, Gérard, primary, Ndiaye, Ndeye Coumba, additional, Shamieh, Said El, additional, Shahabi, Payman, additional, Stathopoulou, Maria, additional, Saleh, Abdel Salam, additional, Godjo, Thibaut, additional, Albertini, Laetitia, additional, and Visvikis-Siest, Sophie, additional
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- 2013
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11. Functional genomics towards personalized healthcare and systems medicine
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Siest, Gérard, primary, Nezhad, Mohsen Azimi, additional, Bagrel, Denyse, additional, Shamieh, Said El, additional, Lambert, Daniel, additional, Ndiaye, Ndeye Coumba, additional, Shahabi, Payman, additional, and Visvikis-Siest, Sophie, additional
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- 2011
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12. Next-generation sequencing applied to a large French cone and cone-rod dystrophy cohort: mutation spectrum and new genotype-phenotype correlation.
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Boulanger-Scemama, Elise, Shamieh, Said El, Démontant, Vanessa, Condroyer, Christel, Antonio, Aline, Michiels, Christelle, Boyard, Fiona, Saraiva, Jean-Paul, Letexier, Mélanie, Souied, Eric, Mohand-Saïd, Saddek, Sahel, José-Alain, Zeitz, Christina, Audo, Isabelle, and El Shamieh, Said
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RETINAL degeneration , *NUCLEOTIDE sequence , *GENETIC mutation , *HUMAN phenotype , *GENETIC disorders , *VISION disorders - Abstract
Background: Cone and cone-rod dystrophies are clinically and genetically heterogeneous inherited retinal disorders with predominant cone impairment. They should be distinguished from the more common group of rod-cone dystrophies (retinitis pigmentosa) due to their more severe visual prognosis with early central vision loss. The purpose of our study was to document mutation spectrum of a large French cohort of cone and cone-rod dystrophies.Methods: We applied Next-Generation Sequencing targeting a panel of 123 genes implicated in retinal diseases to 96 patients. A systematic filtering approach was used to identify likely disease causing variants, subsequently confirmed by Sanger sequencing and co-segregation analysis when possible.Results: Overall, the likely causative mutations were detected in 62.1 % of cases, revealing 33 known and 35 novel mutations. This rate was higher for autosomal dominant (100 %) than autosomal recessive cases (53.8 %). Mutations in ABCA4 and GUCY2D were responsible for 19.2 % and 29.4 % of resolved cases with recessive and dominant inheritance, respectively. Furthermore, unexpected genotype-phenotype correlations were identified, confirming the complexity of inherited retinal disorders with phenotypic overlap between cone-rod dystrophies and other retinal diseases.Conclusions: In summary, this time-efficient approach allowed mutation detection in the most important cohort of cone-rod dystrophies investigated so far covering the largest number of genes. Association of known gene defects with novel phenotypes and mode of inheritance were established. [ABSTRACT FROM AUTHOR]- Published
- 2015
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13. Functional Epistatic Interaction between rs6046G>A in F7 and rs5355C>T in SELE Modifies Systolic Blood Pressure Levels.
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Shamieh, Said El, Ndiaye, Ndeye Coumba, Stathopoulou, Maria G., Murray, Helena A., Masson, Christine, Lamont, John V., Fitzgerald, Peter, Benetos, Athanase, and Visvikis-Siest, Sophie
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BLOOD pressure , *EPISTASIS (Genetics) , *GENE expression , *PHENOTYPES , *BLOOD cells - Abstract
Background: Although numerous genetic studies have been performed, only 0.9% of blood pressure phenotypic variance has been elucidated. This phenomenon could be partially due to epistatic interactions. Our aim was to identify epistatic interaction(s) associated with blood pressure levels in a pre-planned two-phase approach. Methods and Results: In a discovery cohort composed of 3,600 French individuals, we found rs6046A allele in F7 associated with decreased blood pressure levels (P⩽3.7610-3) and rs5355T allele in SELE associated with decreased diastolic blood pressure levels (P = 5610-3). Both variants interacted in order to influence blood pressure levels (P⩽0.048). This interaction was replicated with systolic blood pressure in 4,620 additional European individuals (P = 0.03). Similarly, in this replication cohort, rs6046A was associated with decreased blood pressure levels (P⩽8.5610-4). Furthermore, in peripheral blood mononuclear cells of a subsample of 90 supposed healthy individuals, we found rs6046A positively associated with NAMPT mRNA levels (P⩽9.1610-5), suggesting an eventual involvement of NAMPT expression in blood pressure regulation. Confirming this hypothesis, further transcriptomic analyses showed that increased NAMPT mRNA levels were positively correlated with ICAM1, SELL, FPR1, DEFA1-3, and LL-37 genes expression (P⩽5610-3). The last two mRNA levels were positively associated with systolic blood pressure levels (P⩽0.01) and explained 4% of its phenotypic variation. Conclusion: These findings reveal the importance of epistatic interactions in blood pressure genetics and give new insights for the role of inflammation in its complex regulation. [ABSTRACT FROM AUTHOR]
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- 2012
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14. A Genome-Wide Association Study Identifies rs2000999 as a Strong Genetic Determinant of Circulating Haptoglobin Levels.
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Froguel, Philippe, Ndiaye, Ndeye Coumba, Bonnefond, Amélie, Bouatia-Naji, Nabila, Dechaume, Aurélie, Siest, Gérard, Herbeth, Bernard, Falchi, Mario, Bottolo, Leonardo, Rodriguez, Rosa-Maria Guéant-, Lecoeur, Cécile, Langlois, Michel R., Labrune, Yann, Ruokonen, Aimo, Shamieh, Said El, Stathopoulou, Maria G., Morandi, Anita, Maffeis, Claudio, Meyre, David, and Delanghe, Joris R.
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HAPTOGLOBINS ,ERYTHROCYTES ,GENES ,BLOOD ,INFLAMMATION ,REACTIVE oxygen species - Abstract
Haptoglobin is an acute phase inflammatory marker. Its main function is to bind hemoglobin released from erythrocytes to aid its elimination, and thereby haptoglobin prevents the generation of reactive oxygen species in the blood. Haptoglobin levels have been repeatedly associated with a variety of inflammation-linked infectious and non-infectious diseases, including malaria, tuberculosis, human immunodeficiency virus, hepatitis C, diabetes, carotid atherosclerosis, and acute myocardial infarction. However, a comprehensive genetic assessment of the inter-individual variability of circulating haptoglobin levels has not been conducted so far. We used a genome-wide association study initially conducted in 631 French children followed by a replication in three additional European sample sets and we identified a common single nucleotide polymorphism (SNP), rs2000999 located in the Haptoglobin gene (HP) as a strong genetic predictor of circulating Haptoglobin levels (P
overall = 8.1x10-59 ), explaining 45.4% of its genetic variability (11.8% of Hp global variance). The functional relevance of rs2000999 was further demonstrated by its specific association with HP mRNA levels (α = 0.2360.08, P = 0.007). Finally, SNP rs2000999 was associated with decreased total and low-density lipoprotein cholesterol in 8,789 European children (Ptotal cholesterol = 0.002 and PLDL = 0.0008). Given the central position of haptoglobin in many inflammation-related metabolic pathways, the relevance of rs2000999 genotyping when evaluating haptoglobin concentration should be further investigated in order to improve its diagnostic/therapeutic and/or prevention impact. [ABSTRACT FROM AUTHOR]- Published
- 2012
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15. Association of TLR4 Polymorphisms, Expression, and Vitamin D with Helicobacter pylori Infection.
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Assaad, Shafika, Costanian, Christy, Jaffal, Lama, Tannous, Fida, Stathopoulou, Maria G., and Shamieh, Said El
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HELICOBACTER pylori infections ,VITAMIN D ,SINGLE nucleotide polymorphisms ,HELICOBACTER pylori ,LEUKOCYTES ,GENE expression - Abstract
Helicobacter pylori (H. pylori) infection is the strongest recognized risk factor for gastric adenocarcinoma. Since previous observations have shown that polymorphisms in innate immune system genes, as well as vitamin D (VitD) levels, could modify the risk of infection with Helicobacterpylori (H. pylori), we analyzed the relation between single nucleotide polymorphisms (SNPs) in TLRs (TLR1, TLR2, TLR4) CD14, RUNX3 and VitD levels with H. pylori infection. A case-control study on four hundred sixty Lebanese individuals was conducted. Eleven SNPs in total were genotyped and gene expression analysis using real-time PCR was performed in white blood cells of a subsample of eight individuals. A total of 49% of the participants were affected. Although no direct association was found between the SNPs and H. pylori infection, rs4986790G>A and rs4986791T>C in TLR4 were negatively associated with VitD levels (β = −0.371, p = 5 × 10
−3 and β = −0.4, p = 2 × 10−3 , respectively), which was negatively associated with H. pylori infection (OR = 0.01, p < 1 × 10−3 ). TLR4 expression was 3× lower in individuals with H. pylori compared with non-infected (p = 0.01). TLR4 polymorphisms, expression, and VitD could be implicated in H. pylori infection and further development of gastric adenocarcinoma. [ABSTRACT FROM AUTHOR]- Published
- 2019
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16. Pro- and anti-angiogenic VEGF mRNAs in autoimmune thyroid diseases
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Rancier, Marc, Zaaber, Ines, Stathopoulou, Maria G., Chatelin, Jérôme, Abdelsalam Saleh, Héla Marmouch, Shamieh, Said El, Masson, Christine, Murray, Helena, Lamont, John, Fitzgerald, Peter, Mahjoub, Silvia, Said, Khaled, Besma Bel Haj Jrad Tensaout, Souhir Mestiri, and Visvikis-Siest, Sophie
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3. Good health - Abstract
The aim of this study was to assess the relationships between five different splice isoforms of VEGF mRNA and its plasma levels in individuals treated for autoimmune thyroid diseases (AITD); mainly Graves’ disease (GD) and Hashimoto’s thyroiditis (HT). In a population from Tunisia, levels of thyroid hormones and antibodies were quantified simultaneously with plasma VEGF and VEGF mRNA isoforms after a period of 6 months of patients’ treatment. Plasma VEGF was measured in 110 AITD patients (21 GD and 89 HT patients). VEGF isoforms (VEGF121, VEGF165, VEGF145 and VEGF189 pro-angiogenic isoforms and VEGF165b anti-angiogenic isoform) in peripheral blood mononuclear cells were quantified in 71 patients (20 GD and 51 HT patients) and 86 healthy controls. Decreased levels of VEGF189 mRNA were observed in AITD compared to controls. VEGF165 was increased in GD patients compared to controls and the VEGF165b was increased in HT patients compared to GD. We observed increased levels of VEGF165b in hypothyroid AITD patients after treatment. We have also shown that the VEGF145 isoform levels were determined by FT4 in all patients and by the thyroid status after 6 months of treatment only in HT patients. An association was observed for VEGF165 mRNA levels with anti-TPO antibodies in all patients. Finally, FT4 was associated with VEGF plasma levels but only in healthy controls. In conclusion, this descriptive study highlights the specificity of VEGF mRNA isoforms in AITD, a fact underlining the need for novel clinical trials and the development of personalised theranostic approaches.
17. Pro- and anti-angiogenic VEGF mRNAs in autoimmune thyroid diseases
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Rancier, Marc, Zaaber, Ines, Stathopoulou, Maria G., Chatelin, Jérôme, Abdelsalam Saleh, Héla Marmouch, Shamieh, Said El, Masson, Christine, Murray, Helena, Lamont, John, Fitzgerald, Peter, Mahjoub, Silvia, Said, Khaled, Besma Bel Haj Jrad Tensaout, Souhir Mestiri, and Visvikis-Siest, Sophie
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3. Good health - Abstract
The aim of this study was to assess the relationships between five different splice isoforms of VEGF mRNA and its plasma levels in individuals treated for autoimmune thyroid diseases (AITD); mainly Graves’ disease (GD) and Hashimoto’s thyroiditis (HT). In a population from Tunisia, levels of thyroid hormones and antibodies were quantified simultaneously with plasma VEGF and VEGF mRNA isoforms after a period of 6 months of patients’ treatment. Plasma VEGF was measured in 110 AITD patients (21 GD and 89 HT patients). VEGF isoforms (VEGF121, VEGF165, VEGF145 and VEGF189 pro-angiogenic isoforms and VEGF165b anti-angiogenic isoform) in peripheral blood mononuclear cells were quantified in 71 patients (20 GD and 51 HT patients) and 86 healthy controls. Decreased levels of VEGF189 mRNA were observed in AITD compared to controls. VEGF165 was increased in GD patients compared to controls and the VEGF165b was increased in HT patients compared to GD. We observed increased levels of VEGF165b in hypothyroid AITD patients after treatment. We have also shown that the VEGF145 isoform levels were determined by FT4 in all patients and by the thyroid status after 6 months of treatment only in HT patients. An association was observed for VEGF165 mRNA levels with anti-TPO antibodies in all patients. Finally, FT4 was associated with VEGF plasma levels but only in healthy controls. In conclusion, this descriptive study highlights the specificity of VEGF mRNA isoforms in AITD, a fact underlining the need for novel clinical trials and the development of personalised theranostic approaches.
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