28 results on '"Shah SAH"'
Search Results
2. SELECTION OF DROUGHT TOLERANT WHEAT GENOTYPES BASED ON MEAN PERFORMANCE AND BIPLOT ANALYSIS
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AFZAL, M, primary, KHALID, MN, additional, IMTIAZ, M, additional, NASIR, B, additional, SHAH, SAH, additional, NAWAZ, M, additional, NAYAB, SF, additional, MALIK, SN, additional, MAJEED, T, additional, and MAQBOOL, R, additional
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- 2023
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3. IMPACT OF MACRONUTRIENTS ON THE PRODUCTION OF CLEAN AND HEALTHY MANGO NURSERY PLANTS IN POLYBAGS UNDER NURSERY TUNNEL
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IQBAL, A, primary, MUSTAFA, G, additional, IMRAN, M, additional, HAMEED, A, additional, HUSSAIN, R, additional, HUSSAIN, N, additional, KIRAN, S, additional, IQBAL, J, additional, AIN, NU, additional, and SHAH, SAH, additional
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- 2022
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4. ESTABLISHMENT OF STRATEGY FOR MANGO HOPPER IDIOSCOPUS CLYPEALIS(LETHIERRY) MANAGEMENT AND IMPACT OF WEATHER FACTORS ON ITS POPULATION IN SOUTH PUNJAB PAKISTAN
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GHAFFAR, A, primary, KHAN, AH, additional, HAMEED, A, additional, IQBAL, J, additional, AHMAD, M, additional, RAZA, S, additional, IMRAN, M, additional, MUHAMMD, N, additional, SHAH, SAH, additional, and RAZA, MA, additional
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- 2022
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5. ESTIMATION OF GENE ACTIONFOR THE SELECTION OF SUPERIOR PARENTS AND THEIR CROSS COMBINATIONSFOR YIELD AND FIBER ASSOCIATED ATTRIBUTES IN AMERICAN COTTON (GOSSYPIUM HIRSUTUM L.)
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FATIMA, A, primary, SAEED, A, additional, ULLAH, MI, additional, SHAH, SAH, additional, IJAZ, M, additional, ANWAR, MR, additional, KHALIQ, A, additional, CHOHAN, SM, additional, KHALID, MN, additional, KHAN, A, additional, and AMJAD, I, additional
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- 2022
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6. Explainable AI-Based Skin Cancer Detection Using CNN, Particle Swarm Optimization and Machine Learning.
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Shah SAH, Shah STH, Khaled R, Buccoliero A, Shah SBH, Di Terlizzi A, Di Benedetto G, and Deriu MA
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Skin cancer is among the most prevalent cancers globally, emphasizing the need for early detection and accurate diagnosis to improve outcomes. Traditional diagnostic methods, based on visual examination, are subjective, time-intensive, and require specialized expertise. Current artificial intelligence (AI) approaches for skin cancer detection face challenges such as computational inefficiency, lack of interpretability, and reliance on standalone CNN architectures. To address these limitations, this study proposes a comprehensive pipeline combining transfer learning, feature selection, and machine-learning algorithms to improve detection accuracy. Multiple pretrained CNN models were evaluated, with Xception emerging as the optimal choice for its balance of computational efficiency and performance. An ablation study further validated the effectiveness of freezing task-specific layers within the Xception architecture. Feature dimensionality was optimized using Particle Swarm Optimization, reducing dimensions from 1024 to 508, significantly enhancing computational efficiency. Machine-learning classifiers, including Subspace KNN and Medium Gaussian SVM, further improved classification accuracy. Evaluated on the ISIC 2018 and HAM10000 datasets, the proposed pipeline achieved impressive accuracies of 98.5% and 86.1%, respectively. Moreover, Explainable-AI (XAI) techniques, such as Grad-CAM, LIME, and Occlusion Sensitivity, enhanced interpretability. This approach provides a robust, efficient, and interpretable solution for automated skin cancer diagnosis in clinical applications.
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- 2024
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7. NeoVault: empowering neonatal research through a neonate data hub.
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Pigueiras-Del-Real J, Ruiz-Zafra A, Benavente-Fernández I, Lubián-López SP, Shah SAH, Shah STH, and Gontard LC
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- Humans, Infant, Newborn, Internet, Neonatology methods, Software, Infant, Premature, Posture, Biomedical Research
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Background: Stability during early postnatal life in preterm infants is related to better outcomes. Although vital signs are monitored continuously in Neonatal Intensive Care Unites, this monitoring does not include all physiological parameters nor data such as movement patterns. Although there are scattered sources of data, there is no centralized data hub for neonates information., Results: We have created the first neonate data hub for easy and interactive access to upload or download postural, physiological, and medical data of neonates: NEOVAULT. NEOVAULT is a platform that provides access to information through two interfaces: 1) via a Web interface (designed for medical personnel, data scientists, researchers); and 2) via a RESTful API (Application Programming Interfaces) -designed for developers-, aiming to integrate access to information into third-party applications. The web access allows searching and filtering according to specific parameters, visualization of data through graphs and images, and generation of datasets in CSV format. Access through the RESTful API is described in OpenAPI, enabling access to information from any device, facilitating it in an interoperable format. Currently, it contains nearly 800,000 postural records and 3.000 physiological data entries. The physiological and postural data stored for each neonate in NEOVAULT are collected through the NRP (Neonates Recording Platform) tool, which allows for the automatic and reliable collection of data., Conclusion: NEOVAULT is an open platform for simple access to postural, physiological, and medical data of neonates that can be utilized by researchers, data scientists, medical personnel, and programmers. It enables integration into third-party applications and the generation of customized datasets., Competing Interests: Declarations. Ethics approval and consent to participate: The study was approved by the Puerta del Mar University Hospital (Cadiz, Spain) (reference number 125.22) and after obtaining the informed consent of the parents. All research data are de-identified and securely stored. Consent for publication: Not applicable. Competing interests: The authors declare no competing interests., (© 2024. The Author(s).)
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- 2024
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8. Data-driven classification and explainable-AI in the field of lung imaging.
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Shah STH, Shah SAH, Khan II, Imran A, Shah SBH, Mehmood A, Qureshi SA, Raza M, Di Terlizzi A, Cavaglià M, and Deriu MA
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Detecting lung diseases in medical images can be quite challenging for radiologists. In some cases, even experienced experts may struggle with accurately diagnosing chest diseases, leading to potential inaccuracies due to complex or unseen biomarkers. This review paper delves into various datasets and machine learning techniques employed in recent research for lung disease classification, focusing on pneumonia analysis using chest X-ray images. We explore conventional machine learning methods, pretrained deep learning models, customized convolutional neural networks (CNNs), and ensemble methods. A comprehensive comparison of different classification approaches is presented, encompassing data acquisition, preprocessing, feature extraction, and classification using machine vision, machine and deep learning, and explainable-AI (XAI). Our analysis highlights the superior performance of transfer learning-based methods using CNNs and ensemble models/features for lung disease classification. In addition, our comprehensive review offers insights for researchers in other medical domains too who utilize radiological images. By providing a thorough overview of various techniques, our work enables the establishment of effective strategies and identification of suitable methods for a wide range of challenges. Currently, beyond traditional evaluation metrics, researchers emphasize the importance of XAI techniques in machine and deep learning models and their applications in classification tasks. This incorporation helps in gaining a deeper understanding of their decision-making processes, leading to improved trust, transparency, and overall clinical decision-making. Our comprehensive review serves as a valuable resource for researchers and practitioners seeking not only to advance the field of lung disease detection using machine learning and XAI but also from other diverse domains., Competing Interests: SAS and AD were employed by GPI SpA. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision., (Copyright © 2024 Shah, Shah, Khan, Imran, Shah, Mehmood, Qureshi, Raza, Di Terlizzi, Cavaglià and Deriu.)
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- 2024
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9. Updates on traditional methods for combating malaria and emerging Wolbachia -based interventions.
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Mushtaq I, Sarwar MS, Chaudhry A, Shah SAH, and Ahmad MM
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- Animals, Humans, Mosquito Control methods, Pakistan, Wolbachia, Malaria prevention & control, Mosquito Vectors microbiology
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The escalating challenge of malaria control necessitates innovative approaches that extend beyond traditional control strategies. This review explores the incorporation of traditional vector control techniques with emerging Wolbachia -based interventions. Wolbachia , a naturally occurring bacteria, offers a novel approach for combatting vector-borne diseases, including malaria, by reducing the mosquitoes' ability to transmit these diseases. The study explores the rationale for this integration, presenting various case studies and pilot projects that have exhibited significant success. Employing a multi-dimensional approach that includes community mobilization, environmental modifications, and new biological methods, the paper posits that integrated efforts could mark a turning point in the struggle against malaria. Our findings indicate that incorporating Wolbachia -based strategies into existing vector management programs not only is feasible but also heightens the efficacy of malaria control initiatives in different countries especially in Pakistan. The paper concludes that continued research and international collaboration are imperative for translating these promising methods from the laboratory to the field, thereby offering a more sustainable and effective malaria control strategy., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Mushtaq, Sarwar, Chaudhry, Shah and Ahmad.)
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- 2024
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10. Fumaria indica (Hausskn.) Pugsley Hydromethanolic Extract: Bioactive Compounds Identification, Hypotensive Mechanism, and Cardioprotective Potential Exploration.
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Shah SAH, Rana SL, Mohany M, Milošević M, Al-Rejaie SS, Farooq MA, Faisal MN, and Aleem A
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Fumaria indica (Hausskn.) Pugsley (FIP), a member of the Papaveraceae family, has a documented history of use in traditional medicine to treat cardiovascular ailments, particularly hypertension, and has shown substantial therapeutic efficacy among native cultures worldwide. However, the identification of bioactive compounds and the mechanism of hypotensive effect with the cardioprotective potential investigations are yet to be determined. The study aimed to identify bioactive compounds, explore the hypotensive mechanism and cardioprotective potential, and assess the safety of Fumaria indica (Hausskn.) Pugsley hydromethanolic extract (Fip.Cr). LC ESI-MS/MS analysis was performed to identify the bioactive compounds. In vitro experiments were conducted on isolated rat aorta and atria, and an in vivo invasive BP measurement model was used. Acute and subacute toxicities were assessed for 14 and 28 days, respectively. Isoproterenol (ISO) was used to develop the rats' myocardial infarction damage model. The mRNA levels of NLRP3 inflammasome and the abundance level of Firmicutes and Lactobacillus were measured by qRT-PCR. The hypotensive effect of FIP bioactive compounds was also investigated using in silico methods. Fip. Cr LC ESI-MS/MS analysis discovered 33 bioactive compounds, including alkaloids and flavonoids. In isolated rat aorta, Fip.Cr reversed contractions induced by K
+ (80 mM), demonstrating a calcium entry-blocking function, and had a vasorelaxant impact on phenylephrine (PE) (1 μM)-induced contractions unaffected by L-NAME, ruling out endothelial NO participation. Fip.Cr caused negative chronotropic and inotropic effects in isolated rat atria unaffected by atropine pretreatment, eliminating cardiac muscarinic receptor involvement. Safety evaluation showed no major adverse effects. In vivo, invasive BP measurement demonstrated a hypotensive effect comparable to verapamil. Fip.Cr protected the rats from ISO-induced MI interventions significantly in biometrical and cardiac serum biochemical indicators and histological examinations by reducing inflammation via inhibiting NLRP3 inflammasome and elevating Firmicutes and Lactobacillus levels. The network pharmacology study revealed that the FIP hypotensive mechanism might involve MMP9, JAK2, HMOX1, NOS2, NOS3, TEK, SERPINE1, CCL2, and VEGFA. The molecular docking study revealed that FIP bioactive compounds docked better with CAC1C_ HUMAN than verapamil. These findings demonstrated that Fip.Cr's hypotensive mechanism may include calcium channel blocker activity. Fip.Cr ameliorated ISO-induced myocardial infarction in rats by attenuating inflammation, which might be via inhibiting NLRP3 inflammasome and may prove beneficial for treating MI., Competing Interests: The authors declare no competing financial interest., (© 2024 The Authors. Published by American Chemical Society.)- Published
- 2024
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11. Automated facial characterization and image retrieval by convolutional neural networks.
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Shah STH, Shah SAH, Qureshi SA, Di Terlizzi A, and Deriu MA
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Introduction: Developing efficient methods to infer relations among different faces consisting of numerous expressions or on the same face at different times (e.g., disease progression) is an open issue in imaging related research. In this study, we present a novel method for facial feature extraction, characterization, and identification based on classical computer vision coupled with deep learning and, more specifically, convolutional neural networks., Methods: We describe the hybrid face characterization system named FRetrAIval (FRAI), which is a hybrid of the GoogleNet and the AlexNet Neural Network (NN) models. Images analyzed by the FRAI network are preprocessed by computer vision techniques such as the oriented gradient-based algorithm that can extract only the face region from any kind of picture. The Aligned Face dataset (AFD) was used to train and test the FRAI solution for extracting image features. The Labeled Faces in the Wild (LFW) holdout dataset has been used for external validation., Results and Discussion: Overall, in comparison to previous techniques, our methodology has shown much better results on k-Nearest Neighbors (KNN) by yielding the maximum precision, recall, F1, and F2 score values (92.00, 92.66, 92.33, and 92.52%, respectively) for AFD and (95.00% for each variable) for LFW dataset, which were used as training and testing datasets. The FRAI model may be potentially used in healthcare and criminology as well as many other applications where it is important to quickly identify face features such as fingerprint for a specific identification target., Competing Interests: SAS and AD were employed by GPI SpA. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Shah, Shah, Qureshi, Di Terlizzi and Deriu.)
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- 2023
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12. Hydroxytyrosol mitigates Mycoplasma gallisepticum-induced pulmonary injury through downregulation of the NF-κB/NLRP3/IL-1β signaling pathway in chicken.
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Shan C, Xiong Y, Miao F, Liu T, Akhtar RW, Shah SAH, Gao H, Zhu E, and Cheng Z
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- Animals, NF-kappa B metabolism, Down-Regulation, NLR Family, Pyrin Domain-Containing 3 Protein metabolism, Chickens metabolism, Signal Transduction, Mycoplasma gallisepticum physiology, Lung Injury veterinary
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In this study, the anti-inflammatory and antiapoptotic effects of hydroxytyrosol (HT) in Mycoplasma gallisepticum (MG)-infected chicken were investigated, and the underlying molecular mechanisms were explored. The results revealed severe ultrastructural pathological changes after MG infection in the lung tissue of chicken, including inflammatory cell infiltration, thickening of the lung chamber wall, visible cell swelling, mitochondrial cristae rupture, and ribosome shedding. MG possibly activated the nuclear factor κB (NF-κB)/nucleotide-binding oligomerization domain-like receptor protein 3 (NLRP3)/interleukin (IL)-1β signaling pathway in the lung. However, HT treatment significantly ameliorated MG-induced pathological damage of the lung. HT reduced the magnitude of pulmonary injury after MG infection by reducing apoptosis and releasing the proinflammatory factors. Compared with the MG-infected group, the HT-treated group exhibited significant inhibition of the expression of NF-κB/NLRP3/IL-1β signaling-pathway-related genes; for example, the expressions of NF-κB, NLRP3, caspase-1, IL-1β, IL-2, IL-6, IL-18, and TNF-α significantly decreased (P < 0.01 or <0.05). In conclusion, HT effectively inhibited MG-induced inflammatory response and apoptosis and protected the lung by blocking the activation of NF-κB/NLRP3/IL-1β signaling pathway and reducing the damage caused by MG infection in chicken. This study revealed that HT may be a suitable and effective anti-inflammatory drug against MG infection in chicken., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2023
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13. Hyperglycemia-associated Alzheimer's-like symptoms and other behavioral effects attenuated by Plumeria obtusa L. Extract in alloxan-induced diabetic rats.
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Naz S, Imran I, Farooq MA, Shah SAH, Ajmal I, Zahra Z, Aslam A, Sarwar MI, Shah J, and Aleem A
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Diabetes mellitus is a chronic metabolic complaint with numerous short- and long-term complications that harm a person's physical and psychological health. Plumeria obtusa L. is a traditional medicine used in the treatment of diabetes to reduce complications related to behavior. Plumeria is a genus with antipsychotic activities. The objective of this study was to examine the effects of a methanolic extract of Plumeria obtusa L. in the attenuation of diabetes, on symptoms of Alzheimer disease, and on other associated behavioral aspects. A single dose of alloxan was administered to an experimental group of rats to induce development of diabetes (150 mg/kg, intraperitoneal) and the rats were then administered selected doses of methanolic extract of Plumeria obtusa L. (Po.Cr) or glibenclamide (0.6 mg/kg) for 45 consecutive days. Behavioral effects were evaluated using three validated assays of anxiety-related behavior: the open field test, the light and dark test, and the elevated plus maze. Anti-depressant effects of Plumeria obtusa L. were evaluated using the forced swim test (FST) and memory and learning were assessed using the Morris water maze (MWM) task. Po.Cr was also evaluated for phytochemicals using total phenolic content (TPC), total flavonoid content (TFC), and high-performance liquid chromatography assays, and antioxidant capability was assessed through assays of DPPH radical scavenging, total oxidation capacity, and total reducing capacity. In the alloxan-induced model of diabetes, the administration of Po.Cr and glibenclamide for 45 days produced a marked decrease ( p < 0.001) in hyperglycemia compared to control animals. Po.Cr treatment also resulted in improvement in indicators, such as body weight and lipid profile ( p < 0.05), as well as restoration of normal levels of alanine transaminase (ALT) ( p < 0.001), a biomarker of liver function. Diabetic rats presented more Alzheimer-like symptoms, with greater impairment of memory and learning, and increased anxiety and depression compared to non-diabetic normal rats, whereas treated diabetic rats showed significant improvements in memory and behavioral outcomes. These results demonstrate that Po.Cr reversed alloxan-induced hyperglycemia and ameliorated Alzheimer-related behavioral changes, which supports additional study and assessment of conventional use of the plant to treat diabetes and associated behavioral complications., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Naz, Imran, Farooq, Shah, Ajmal, Zahra, Aslam, Sarwar, Shah and Aleem.)
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- 2022
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14. Validation of double freezing protocol for Beetal buck (Capra hircus) spermatozoa.
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Shah SAH, Haider MS, Ahmed H, Fayyaz MH, and Andrabi SMH
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- Male, Animals, Freezing, Cryoprotective Agents, Sperm Motility, Cryopreservation veterinary, Cryopreservation methods, Semen, Spermatozoa, Goats, DNA, Semen Preservation veterinary, Semen Preservation methods
- Abstract
The study aimed to validate the double versus single freezing protocol for Beetal buck (Capra hircus) spermatozoa in tris-citric acid (TCA) based extender both in terms of quality and fertilization potential. Computer-assisted sperm motion and kinematic (CASA) variables, i.e. total (%), and progressive motilities (TM and PM, %) and rapid velocity (RV, %), average path (VAP, μm/s), straight line (VSL, μm/s) and curved line velocities (VCL, μm/s), straightness, (VSL/VAP, %) and linearity, (VSL/VCL, %) as well as supra-vital plasma membrane integrity (SV-PMI, %), mitochondrial membrane potential (MMP, %), viable/intact acrosome (V-IACR, %) and DNA integrity (DNA-I, %) had significantly greater values (p < .05) during single freeze-thawing as compared with the double freeze-thawing at 0, 30, 90, 150 and 210 days, respectively. All CASA and other assays alone did not show significant differences (p > .05) between both freeze-thaw cycles at all treatment durations, respectively. No statistical significance (p > .05) was observed for the in vivo fertility between single (n = 84/141 = 59.72%) and double freeze-thawing (n = 72/136 = 52.9%) cycles, respectively. In conclusion, sperm motion, kinematics, plasma membrane, acrosome, mitochondria and DNA integrities and in vivo fertility are acceptable after the double freezing protocol despite being lower than after one freeze cycle in Beetal buck., (© 2022 Wiley-VCH GmbH.)
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- 2022
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15. Kisspeptin-10 in cryodiluent improves the post-thaw quality of Nili-Ravi buffalo (Bubalus bubalis) bull spermatozoa.
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Fayyaz MH, Andrabi SMH, Haider MS, Khalique MA, and Shah SAH
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- Animals, Antioxidants pharmacology, Catalase metabolism, Citric Acid pharmacology, Cryopreservation veterinary, Cryoprotective Agents pharmacology, Glutathione, Kisspeptins, Male, Semen metabolism, Semen Analysis, Sperm Motility, Spermatozoa, Buffaloes, Semen Preservation veterinary
- Abstract
Effects of kisspeptin-10 as antioxidant in cryodiluent were evaluated on post-thaw quality of buffalo spermatozoa. Qualified semen samples from five bulls were pooled, divided into five aliquots and extended in Tris-citric acid cryodiluent containing differential doses of kisspeptin-10 (5, 10, 15, and 20 μmol L
-1 and negative control. Extended sperm suspension was cooled to 4°C, packaged in 0.54 ml straws and cryopreserved. At post-thawing, catalase (unit mg-1 ), peroxidase (unit mg-1 ) and reduced glutathione (μmol L-1 ) levels were highest (p < 0.05) with 20 μmol L-1 of kisspeptin-10 as compared to negative control. Moreover, lipid peroxidation (nmol L-1 min-1 mg protein-1 ) level was lowest (p < 0.05) with 20 μmol L-1 of kisspeptin-10. Sperm progressive motility (%), rapid velocity (%) and kinematics were higher (p < 0.05) with 15 and 20 μmol L-1 of kisspeptin-10 as compared to negative control. Supra-vital plasma membrane integrity (%), viable sperm with intact acrosome (%) and DNA integrity (%) were improved (p < 0.05) with all doses of kisspeptin-10 as compared to negative control. It was concluded that the addition of 15 and 20 μmol L-1 kisspeptin-10 in cryodiluent ameliorated the overall frozen-thawed quality parameters of Nili-Ravi buffalo spermatozoa., (© 2022 Wiley-VCH GmbH.)- Published
- 2022
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16. A systematic review and meta-analysis of spermatozoa cryopreservation, in vitro and in vivo fertility practices in water buffalo.
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Shah SAH and Andrabi SMH
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- Animal Husbandry, Animals, Male, Buffaloes physiology, Cryopreservation veterinary, Fertility, Semen Preservation veterinary, Spermatozoa physiology
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We explored different aspects of buffalo spermatozoa during cryopreservation. The meta-data comprised of 285 studies, published from January 2008 to March 2020. A free web tool CADIMA as well as PRISMA 2009 Flow Diagram were used for carrying out this study. The inter-reviewer agreement among studies allocated was satisfactory for criteria A (selection bias), B (performance bias), C (detection bias) and D (attrition bias), respectively. India led the percent (%) research ladder with 34.4, followed by Pakistan (29.5), Egypt (12.3), Iran (7.7), Italy (5.6), Indonesia (3.2), China (2.1), Brazil (1.4), Thailand (1.1), Philippines and Bulgaria (0.7 each), Saudi Arabia, Turkey, Vietnam, and USA (0.4 each). Among four categories of studies, Group-1 evaluated only supplements/additives/media in the freezing semen extender (n = 191/285; 67.02%); Group-2 conducted in vivo fertilization (n = 62/285; 21.75%) and Group-3 conducted in vitro fertilization/ cleavage rate/penetration rate/ blastocyst yields (n = 28/285; 9.82%) with their specific cryodiluents/media, respectively. Group-4 conducted different experimental supplements/additives/media and carried out both in vitro and in vivo fertilization simultaneously (n = 4/285; 1.40%). Conventional spermatozoa cryopreservation was reported by 51.9% studies followed by programmable fast freezing by 20.7% studies. A few leading extender types included BioXcell (3.9%); Soyamilk-skim (3.5%); and Andromed (2.1%). The study also describes French straws for semen filling, cooling temperatures, extension time, equilibration time, cryopreservation stages, thawing temperatures, seasons, thawing time, and stains used during semen evaluation assays. The study concludes that the research on spermatozoa cryopreservation of buffalo is largely conducted at quality level and a need of applying these findings for evaluation of fertility potential (in vivo and in vitro) is indispensable for effective genetic improvement., (© 2021. The Author(s), under exclusive licence to Springer Nature B.V.)
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- 2021
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17. Ginsenoside Rb1 prevents deoxynivalenol-induced immune injury via alleviating oxidative stress and apoptosis in mice.
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Rajput SA, Shaukat A, Rajput IR, Kamboh AA, Iqbal Z, Saeed M, Akhtar RW, Shah SAH, Raza MA, El Askary A, Abdel-Daim MM, Mohammedsaleh ZM, Aljarai RM, Alamoudi MO, and Alotaibi MA
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- Animals, Male, Mice, Mice, Inbred C57BL, Random Allocation, Apoptosis drug effects, Ginsenosides pharmacology, Immunotoxins adverse effects, Mycotoxins adverse effects, Oxidative Stress drug effects, Protective Agents pharmacology, Trichothecenes adverse effects
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Deoxynivalenol (DON) is considered to be a grave threat to humans and animals. Ginsenoside Rb1 (Rb1) has been reported for its antioxidant potential and medicinal properties. However, the shielding effects of Rb1 and the precise molecular mechanisms against DON-induced immunotoxicity in mice have not been reported yet. In the present research, 4-weeks old healthy C57BL/6 mice were randomly assigned into four experimental groups (n = 12), viz., CON, DON 3 mg/kg BW, Rb1 50 mg/kg BW and DON 3 mg/kg + Rb1 50 mg/kg BW (DON + Rb1). Feed intake and body weight gain were monitored during the entire experiment (15 d). Our results demonstrated that Rb1 markedly increased the ADG (30%) and ADFI (25.10%) of mice compared with DON group. Furthermore, Rb1 alleviated the DON-induced immune injury by relieving the splenic histopathological alteration, enhancing the T-lymphocytes subsets (CD4
+ , CD8+ ), the levels of cytokines (IL-2, IL-6, IFN-γ, and TNF-α), as well as production of immunoglobulins (IgA, IgM, and IgG). Moreover, Rb1 ameliorated DON-inflicted oxidative stress by reducing the ROS, MDA and H2 O2 contents and boosting the antioxidant defense system (T-AOC, T-SOD, CAT, and GSH-Px). Additionally, Rb1 significantly reversed the DON-induced excessive splenic apoptosis via modulating the mitochondria-mediated apoptosis pathway in mice, depicting the decreased percentage of splenocyte apoptotic cells by 26.65%, down-regulated the mRNA abundance of Bax, caspase-3, caspase-9, and protein expression of Bax, cleaved caspase-3, and Cyt-c. Simultaneously, Rb1 markedly rescued both Bcl-2 mRNA and protein expression levels. Taken together, Rb1 mitigates DON-induced immune injury by suppressing the oxidative damage and regulating the mitochondria-mediated apoptosis pathway in mice. Conclusively, our current research provides an insight into the preventive mechanism of Rb1 against DON-induced immune injury in mice and thus, presents a scientific baseline for the therapeutic application of Rb1., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2021
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18. Effect of walnut (Juglans sigillata) oil on intestinal antioxidant, anti-inflammatory, immunity, and gut microbiota modulation in mice.
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Miao F, Shan C, Shah SAH, Akhtar RW, Wang X, and Ning D
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- Animals, Anti-Inflammatory Agents pharmacology, Antioxidants pharmacology, Intestinal Mucosa, Mice, Gastrointestinal Microbiome, Juglans
- Abstract
The study investigated the anti-oxidant, anti-inflammatory, immunity, and gut microbiota modulation in mice (n = 60; 15 mice/group) after intragastric administration of walnut oil (WO; three groups (low (LD), medium (MD), and high doses (HD): 2.5, 5, and 10 ml/kg, respectively) and normal control (NC, saline). WO significantly increased the median villous height/crypt depth (VH/CD) ratio, the activities of superoxide dismutase (SOD), and glutathione peroxidase (GSH-Px) in intestinal mucosa. WO exerted the anti-inflammatory effects by decreasing the expression of tumor necrosis factor-α (TNF-α) in the duodenal mucosa. All groups shared 157 operational taxonomic units (OTUs; 97% similarity) representing nine phyla. The relative abundance in gut microbiota shifted from more pathogenic bacteria-Helicobacter (NC: 22% versus MD: 3%) toward probiotic-Lactobacillus (NC: 19% versus MD: 40%). The immune organ index (spleen) and contents of secretory immunoglobulin A (S-IgA) were increased from small intestine. In conclusion, WO decreased the oxidative stress, inflammation, and improved the immunity and beneficial gut microbiota in the mice. PRACTICAL APPLICATIONS: Walnut oil (WO) is widely used in traditional medicine around the world and is prescribed as beneficial food oil in agro-industry. However, the intestinal benefits of WO have not been explored extensively, and even its therapeutic mechanism still remains unknown in modern medicine. In this study, WO from Juglans sigillata was investigated for its preventive and protective effects on the intestinal mucosa in mice including anti-oxidant, anti-inflammatory, immunity, and gut microbiota modulation. WO decreased the oxidative stress, inflammation, and improved immunity and beneficial gut microbiota in the mice. WO has shown strong probiotic effect on the gut, and thus, can be considered as a potential candidate in food. The study outcome would enhance utilization of WO for the prevention of gastrointestinal diseases (e.g., Helicobacter, etc.) both in animals and human (inflammatory bowel diseases, IBD) and the formulation of functional foods., (© 2020 Wiley Periodicals LLC.)
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- 2021
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19. The protective effect of walnut oil on lipopolysaccharide-induced acute intestinal injury in mice.
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Miao F, Shan C, Shah SAH, Akhtar RW, Geng S, Ning D, and Wang X
- Abstract
Walnut oil (WO) is widely used in traditional medicine, and it has become a dietary supplement in many countries. We isolated walnut oil from Juglans sigillata and evaluated its protective effects on acute intestinal injury, and Toll-like receptor 4 (TLR4)/nuclear factor-κB (NF-κB) signaling pathway in lipopolysaccharide (LPS)-induced mice was studied. The results showed that the LPS + WO group significantly decreased serum tumor necrosis factor-α (TNF-α), interleukin-6 (IL-6), and IL-1β levels and increased the jejunum superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px) levels compared with the LPS group. Walnut oil ameliorated the pathological morphology of the LPS-induced acute jejunum injury and decreased jejunum cells apoptosis rate and TLR4/NF-κB protein expression. Furthermore, the expression of the TLR4/NF-κB pathway key gene mRNA significantly reduced after treatment with walnut oil. This study concludes that walnut oil can exert the protective effect on LPS-induced acute intestinal injury in mice by inhibiting the TLR4/NF-κB signaling pathway., Competing Interests: All authors declare that they have no conflict of interests., (© 2020 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC.)
- Published
- 2020
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20. Comparison of Growth Characteristics and Genomics of Two Canine Distemper Virus Strains Isolated From Minks in China.
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Tao R, Chen J, Zhao T, Gong C, Pan H, Akhtar RW, Li X, Shah SAH, Li Q, and Zhao J
- Abstract
Canine distemper (CD), caused by the CDV variant strain with H
I542N/Y549H , has become an epidemic in fur-bearing animals in China since 2012. To well understand the genomic and replicated characteristics of the CDV variants, we determined the viral growth kinetics and completed the genome sequences of two CDV strains, namely SDZC(17)M2 and LNDL(17)M4, isolated from CDV-infected minks from Shandong and Liaoning province in China, in 2017. SDZC(17)M2 showed higher viral titers and extensive syncytia in BHK-minkSLAM (BMS) cells than LNDL(17)M4. Although both two strains belong to the Asia-1 genotype and clustered an independent clade in the phylogenetic tree, SDZC(17)M2, harboring I542N/Y549H substitutions in the H protein, shared high identity (99.3-99.6% nt) with the other variant strains, whereas LNDL(17)M4, with the only Y549H substitution, shared a lower identity (97.7%-97.9% nt) with the other variant strains. Furthermore, a novel R223K substitution was identified in the conserved cleavage site (RRQ R R → RRQ K R) of the F protein in the SDZC(17)M2 strain. However, it which did not significantly affect the cell to cell fusion activity when combined with the CDV H/minkSLAM in BHK-21 cells. The key variations in the genome contributed to the virulence and the evolutionary trend need to be determined in the future., (Copyright © 2020 Tao, Chen, Zhao, Gong, Pan, Akhtar, Li, Shah, Li and Zhao.)- Published
- 2020
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21. Alpha-tocopheryl Succinate in Extender Improves the Post Thaw Quality of Water Buffalo Spermatozoa.
- Author
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Kanwal L, Shah SAH, Ahmed H, Hussain A, and Andrabi SMH
- Subjects
- Animals, Cryopreservation veterinary, Male, Semen Analysis, Sperm Motility, Spermatozoa, Buffaloes, Cryoprotective Agents pharmacology, Semen Preservation veterinary, alpha-Tocopherol pharmacology
- Abstract
Background: Alpha-tocopheryl succinate, a major chain-splitting antioxidant, is the most effective form of vitamin E and may be used in the semen extender for cryopreservation of buffalo spermatozoa., Objective: To use different concentrations of alpha-tocopheryl succinate (T1, 0.3 mM, T2, 0.6 mM, and T3, 0.9 mM) and control (0.0 mM) in extender for dose optimization and hence improve the frozen-thawed quality of water buffalo spermatozoa., Materials and Methods: Semen samples were collected from three mature buffalo bulls with artificial vagina (42°C) and this study was replicated for five times. Semen was cryopreserved by conventional method which included filling of semen per experimental treatment into 0.5 mL French straws, sealing with polyvinyl alcohol powder and keeping them 5 cm above the liquid nitrogen vapors for 12 min and storing in liquid nitrogen tank. Frozen-thawed semen was also processed for total antioxidant capacity content (TAC) and lipid peroxidation (LPO) level by thiobarbituric acid (TBA). Computer-assisted semen analysis (CASA) and other assays were also performed., Results: TAC levels were higher (P<0.05) with T2 and T3 as compared to T1 and control. LPO levels were lower (P<0.05) with T2 and T3 as compared to T1 and control. Sperm progressive motility (%) and rapid velocity (%) were higher (P<0.05) with T2 and T3 as compared to control. The extender containing T3 had higher (P<0.05) sperm average path velocity (μm/s) and straight line velocity (μm/s) as compared to control. At 1 and 2 h incubation period (37 °C) T2 and T3 in extenders had higher (P<0.05) progressive motility and rapid velocity compared to control. Sperm supra vital plasma membrane integrity (%), mitochondrial transmembrane potential (%), viable and intact acrosome (%) and DNA integrity (%) were higher (P<0.05) with T2 and T3 as compared to T1 and control, respectively., Conclusion: The supplementation of alpha-tocopheryl succinate in extender, either at 0.6 (T2) or 0.9 (T3) mM concentrations improves the post thaw quality of water buffalo spermatozoa by sustaining the TAC levels and keeping the LPO levels lower as compared to the control. It is suggested that future study should be aimed to explore the influence of these optimal concentrations of alpha-tocopheryl succinate on in vivo fertility of buffalo bull spermatozoa.
- Published
- 2020
22. Identification of proteins that mediate the role of androgens in antler regeneration using label free proteomics in sika deer (Cervus nippon).
- Author
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Akhtar RW, Liu Z, Wang D, Ba H, Shah SAH, and Li C
- Subjects
- Androgens blood, Animals, Chromatography, Liquid, Gene Expression Regulation, Gene Ontology, Protein Interaction Maps, Proteome genetics, Proteome metabolism, Reproducibility of Results, Signal Transduction, Tandem Mass Spectrometry, Testosterone blood, Androgens metabolism, Antlers physiology, Deer metabolism, Proteomics, Regeneration physiology
- Abstract
Deer antlers offer a unique model to study organ regeneration in mammals. Antler regeneration relies on the pedicle periosteum (PP) cells and is triggered by a decrease in circulating testosterone (T). The molecular mechanism for antler regeneration is however, unclear. Label-free liquid chromatography-mass spectrometry (LC-MS/MS) was used to identify differentially-expressed proteins (DEPs) in the regeneration-potentiated PP (under low T environment) over the non-regeneration-potentiated PP (under high T environment). Out of total 273 DEPs, 189 were significantly up-regulated and 84 were down-regulated from these comparisons: after castration vs before castration, natural T vs before castration, and exogenous T vs before castration. We focused on the analysis only of those DEPs that were present in fully permissive environment to antler regeneration (low T). Nine transduction pathways were identified through the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, including the estrogen signaling pathway. A total of 639 gene ontology terms were found to be significantly enriched in regeneration-potentiated PP (low T) from the DEPs. Reliability of the label free LC-MS/MS was determined by qRT-PCR to estimate the expression level of selected genes. The results suggest that up-regulated heat shock proteins (HSP90AB1, HSP90B1), peptidyl-prolyl cis-trans isomerase 4 (FKBP4), mitogen-activated protein kinase 3 (MAPK3) and calreticulin (CALR) and down-regulated SHC-transforming protein 1 (SHC1), heat shock protein family A member 1A (HSPA1A) and proto-oncogene tyrosine-protein kinase (SRC) may be associated directly or indirectly with antler regeneration. Further studies are required to investigate the roles of these proteins in regeneration using appropriate in vivo models., (Copyright © 2019. Published by Elsevier Inc.)
- Published
- 2019
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23. Effect of Cryopreservation on Casa Characteristics, Mitochondrial Transmembrane Potential, Plasma and Acrosome Integrities, Morphology and in vivo Fertility of Buffalo Bull Spermatozoa.
- Author
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Ahmed H, Andrabi SMH, Shah SAH, and Jahan S
- Subjects
- Animals, Buffaloes, Fertility, Male, Membrane Potential, Mitochondrial, Sperm Motility, Acrosome, Cryopreservation veterinary, Semen Preservation veterinary, Spermatozoa cytology
- Abstract
Background: Application of frozen-thawed semen is an important tool for improving the vivo fertility, but the process of freezing and thawing causes significant damage to spermatozoa., Objective: The aim of this study was to evaluate the effect of cryopreservation on CASA characteristics, mitochondrial transmembrane potential, plasma, and acrosome integrities, morphology and in vivo fertility of buffalo bull spermatozoa., Materials and Methods: Semen was collected from four mature buffalo bulls with artificial vagina at 42 °C. Ejaculates having > 1 mL volume, > 60 % sperm visual motility and > 0.5 x 10
9 sperm/mL concentration from each bull were diluted in Tris-citric acid egg yolk glycerol extender (TCA) making two aliquots per bull for analysis at post dilution and cryopreserved respectively., Results: Analysis of variance (ANOVA) showed that the process of freezing and thawing significantly reduced (P < 0.05) CASA characteristics including total motility (TM, %), progressive motility (PM, %), rapid velocity (RV, %), average path velocity (VAP, µm/sec), straight line velocity (VSL, µm/sec), curvilinear velocity (VCL, µm/sec), beat cross frequency (BCF, Hz), straightness (STR, %) and linearity (LIN, %). Furthermore, the process of freezing and thawing significantly reduced (P < 0.05) subjective motility (SM, %), Supra-vital plasma membrane integrity (SVPMI, %), high mitochondrial membrane potential (HMMP, %), viable spermatozoa with intact acrosome (V/IACR, %). Moreover, it was observed that the freezing thawing process significantly decreased the in vivo fertility (%, 50.35 % vs. 61.39 %; P < 0.05) as compared to post diluted semen., Conclusion: It is concluded that the process of freezing and thawing significantly reduced semen quality and in vivo fertility of buffalo bull in terms of various functional parameters.- Published
- 2019
24. Association of detoxification enzymes with butene-fipronil in larvae and adults of Drosophila melanogaster.
- Author
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Arain MS, Shakeel M, Elzaki MEA, Farooq M, Hafeez M, Shahid MR, Shah SAH, Khan FZA, Shakeel Q, Salim AMA, and Li GQ
- Subjects
- Animals, Drosophila melanogaster metabolism, Drug Interactions, Inactivation, Metabolic, Insect Control, Insecticide Resistance, Larva drug effects, Larva metabolism, Drosophila melanogaster drug effects, Enzyme Inhibitors pharmacology, Hydrocarbons, Halogenated pharmacology, Insecticides pharmacology, Maleates pharmacology, Organophosphates pharmacology, Piperonyl Butoxide pharmacology, Pyrazoles pharmacology
- Abstract
Insecticide resistance is a major challenge in successful insect pest control as the insects have the ability to develop resistance to various widely used insecticides. Butene-fipronil is a novel compound with high toxicity to insects and less toxicity to the non-target organisms. In the present study, the effect of butene-fipronil alone and in combination with three enzyme inhibitors, piperonyl butoxide (PBO), diethyl maleate (DEM), and triphenyl phosphate (TPP), was carried out on larvae and adults of Drosophilia melanogaster. Our results indicated that the co-toxicity indices of butene-fipronil + PBO, butene-fipronil + TPP, and butene-fipronil + DEM mixtures were 437.3, 335.0, and 210.3, respectively, in the second-instar larvae, while 186.6, 256.2, and 238.5, respectively, in the adults, indicating synergistic effects. Interestingly, butene-fipronil increased the expression of CYP28A5 in the larvae; CYP9F2, CYP304A1, CYP28A5, and CYP318A1 in the female adults; and CYP303A1 and CYP28A5 in the male adults. Furthermore, high-level expression of Est-7 was observed in the female adults compared to larvae and male adults. Our results suggest that there is no difference in butene-fipronil metabolism in larvae and male and female adults of D. melanogaster.
- Published
- 2018
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25. Effect of kisspeptin-10, LH and hCG on serum testosterone concentrations in stallions, donkeys and mules.
- Author
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Akhtar RW, Shah SAH, and Qureshi IZ
- Subjects
- Animals, Luteinizing Hormone blood, Male, Chorionic Gonadotropin pharmacology, Equidae blood, Kisspeptins pharmacology, Luteinizing Hormone pharmacology, Testosterone blood
- Abstract
This study was conducted to determine the response of serum testosterone (T) in male equines (stallions, donkeys and mules) after administering intravenous doses of kisspeptin-10 (KP-10), human chorionic gonadotropin (hCG) and luteinizing hormone (LH) and saline as a control. The animals were divided into four groups of three each: Group I, 3 ml of 0.95% saline; Group II, 50 μg KP-10; Group III, 2500 IU hCG and group IV, 400 μg LH. The administration of KP-10 and hCG to stallions resulted in a significant increase in serum T concentration at 240 min; whereas it was significantly higher at 30, 60, 120, and 240 min with LH treatment as compared to pre-dose concentrations. Both KP-10 and hCG significantly elevated the T concentrations in donkeys at 120 and 240 min, respectively; whereas it was significantly higher at 60, 120, and 240 min with LH treatment as compared to pre-dose concentration. Both KP-10 and LH elevated T in donkeys at 240 min as compared to the control and hCG concentrations. After 120 and 240 min, T concentrations in mules were higher (p < 0.05) with administration of KP-10, hCG and LH as compared to the control. In conclusion, the administration of KP-10, hCG and LH elevate the serum T concentration in normal male equines. It is suggested that KP-10 may be useful in situations where an increase in T is desired. Further work is required to determine the effect of KP-10 on T in male equids with reproductive abnormalities before it can be used in clinical situations., (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Published
- 2017
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26. Freezability of water buffalo bull (Bubalus bubalis) spermatozoa is improved with the addition of curcumin (diferuoyl methane) in semen extender.
- Author
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Shah SAH, Andrabi SMH, and Qureshi IZ
- Subjects
- Animals, Buffaloes, Cryopreservation, DNA Damage drug effects, Male, Sperm Motility drug effects, Spermatozoa drug effects, Cryoprotective Agents pharmacology, Curcumin pharmacology, Semen drug effects, Semen Preservation methods
- Abstract
Effects of curcumin as antioxidant in extender were evaluated on freezability of buffalo spermatozoa. Semen from each of the five bulls (n = 3 replicates, six ejaculates/bull, a total of 30 ejaculates) was diluted in Tris-citric acid extender containing curcumin (0.5, 1.0, 1.5 or 2.0 mM) or control. At pre-freezing and post-thawing, total antioxidant contents (μM/L) and lipid peroxidation levels (μM/ml) were higher (p < .05) and lower (p < .05) respectively, with 1.5 and 2.0 mM compared to 0.5 and 1.0 mM curcumin and control. At post-thawing, progressive motility (PM, %) and rapid velocity (RV, %) were higher (p < .05) with 1.5 mM compared to other doses of curcumin and control (except in case of RV, 1.5 was similar with 1.0 mM). Kinematics (average path velocity, μm/s; straight-line velocity, μm/s; curved-line velocity, μm/s; straightness, %; linearity, %), in vitro longevity (%, PM and RV) and DNA integrity (%) at post-thawing were higher (p < .05) with 1.5 mM compared to control. At post-thawing, supravital plasma membrane integrity (%) and viable spermatozoa with intact acrosome (%) were higher with 1.5 compared to 2.0 mM curcumin and control. We concluded that freezability of water buffalo spermatozoa is improved with the addition of 1.5 mM curcumin in extender., (© 2016 Blackwell Verlag GmbH.)
- Published
- 2017
- Full Text
- View/download PDF
27. Programmable fast-freezing method improves the post-thaw motion dynamics, integrities of plasmalemma, mitochondrial transmembrane, DNA and, acrosome, and in vivo fertility of water buffalo (Bubalus bubalis) spermatozoa.
- Author
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Khalil Ur Rehman H, Andrabi SMH, Ahmed H, and Shah SAH
- Subjects
- Animals, Buffaloes, Cryopreservation methods, Cryoprotective Agents pharmacology, Fertilization in Vitro methods, Fertilization in Vitro veterinary, Freezing, Male, Semen Preservation methods, Sperm Motility physiology, Acrosome physiology, Cryopreservation veterinary, DNA, Mitochondrial, Mitochondrial Membranes physiology, Semen Preservation veterinary, Spermatozoa physiology
- Abstract
The effects of freezing methods (FR1, nonprogrammable/static, 5 cm above liquid nitrogen [LN
2 ] for 10 min, plunging in LN2 ; FR2, programmable medium, +4°C to -15°C at 3°C min-1 , from -15 to -80°C at 10°C min-1 and final holding for 1 min at -80°C, plunging in LN2 ; FR3, programmable fast, from initial holding at +4°C for 2 min, from +4°C to -20°C at 10°C min-1 , from -20°C to -100°C at 30°C min-1 , final holding for 1 min at -100°C and plunging in LN2 ) were assessed on post-thaw in vitro quality and in vivo fertility of water buffalo spermatozoa. Mean sperm progressive motility (%), rapid velocity (%), average path velocity (μm s-1 ), straight line velocity (μm s-1 ), curved line velocity (μm s-1 ), integrities (%) of plasmalemma, mitochondrial transmembrane, DNA and acrosome were higher (p < .05) in samples cryopreserved with FR3 compared to FR1 and FR2. Similarly, in vivo fertility (%) of buffalo spermatozoa was higher (p < .05) with FR3 than FR1 (%; 68.0 versus 50.0). We concluded that programmable fast-freezing method (FR3) improves the post-thaw in vitro quality and in vivo fertility of water buffalo spermatozoa., (© 2016 Blackwell Verlag GmbH.)- Published
- 2017
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- View/download PDF
28. Concurrence of Torus Palatinus, Torus Mandibularis and Buccal Exostosis.
- Author
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Khan S, Shah SAH, Ali F, and Rasheed D
- Subjects
- Exostoses complications, Exostoses surgery, Female, Humans, Mandible pathology, Mandible surgery, Mandibular Diseases surgery, Palate, Hard pathology, Palate, Hard surgery, Treatment Outcome, Young Adult, Exostoses pathology, Mandible abnormalities, Mandibular Diseases pathology, Palate, Hard abnormalities
- Abstract
Torus palatinus (TP), torus mandibularis (TM), and buccal exostosis are localised, benign, osseous projections, occurring in maxilla and mandible. Etiology is multifactorial and not well established. Tori and exostoses have been associated with parafunctional occlusal habits, temporomandibular joint (TMJ) disorders, migraine and consumption of fish. Concurrence of TP, TM, and exostosis in the same individual is very rare. Concurrence of TPand TM has not been reported from Pakistan. We report a case of a 22-year female patient manifesting concurrence of TP, bilateral TM, and maxillary buccal exostoses; with possible association of abnormal occlusal stresses and use of calcium and vitamin D supplements.
- Published
- 2016
- Full Text
- View/download PDF
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