43 results on '"Selective modification"'
Search Results
2. Cu3-xP nanocrystals filled halloysite nanotubes for chemodynamic therapy of breast cancer.
- Author
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Zhao, Puxiang, Hu, Jiaojiao, Feng, Yue, Wu, Feng, Tan, Cuiying, Chen, Xiaodan, and Liu, Mingxian
- Subjects
- *
HALLOYSITE , *BREAST cancer , *NANOTUBES , *COPPER , *CANCER treatment , *CELL membranes - Abstract
[Display omitted] Copper-based Fenton-like agents have the ability to convert weakly oxidizing H 2 O 2 into highly oxidizing hydroxyl radicals (·OH) at tumor sites during chemodynamic therapy (CDT). In this study, the interfacial attraction properties between the negatively charged OCP− in sodium phosphathynolate (NaOCP) and the positively charged environment inside the lumen of halloysite nanotubes (HNTs) were utilized to synthesize Cu 3-x P nanoparticles in situ within the HNTs. The study investigated the chemical composition, morphology, and structure of Cu 3-x P@HNTs. The results indicated uniform distribution of Cu 3-x P particles measuring 3–5 nm within HNTs' lumen. Experiments conducted internally and externally to cells confirmed the catalytic capability of Cu 3-x P@HNTs to oxidize H 2 O 2 to ·OH. Furthermore, CP@H-CM was synthesized by enclosing Cu 3-x P@HNTs in a cancer cell membrane, which selectively targets cancer cells. The experiments revealed the cytotoxicity of CP@H-CM on 4T1 cells. Additionally, the antitumor efficacy of CP@H-CM was evaluated in vivo through tumor recurrence experiments in mice. Moreover, the efficacy of CP@H-CM in repressing tumor growth was enhanced by incorporating infrared laser, indicating a synergistic photodynamic treatment for breast cancer. This study presents an efficacious and viable therapeutic approach to inhibit postoperative tumor reappearance. The implications of this approach are promising, particularly in the domain of tumor treatment and metastasis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Nanoelectrodes and Nanopores Ensembles for Electrobioanalytical Applications
- Author
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Battaglini, Fernando, Azad, Uday Pratap, editor, and Chandra, Pranjal, editor
- Published
- 2023
- Full Text
- View/download PDF
4. Photochlorination to prepare semiconducting single-walled carbon nanotube and its intramolecular junction.
- Author
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Wang, Taibin, Wang, Ying, Zhang, Hongjie, Zhang, Xinyu, Zuo, Hui, Qian, Jinjie, Du, Ran, Zhang, Shuchen, Yang, Zhi, Zhao, Qiuchen, Hu, Yue, and Huang, Shaoming
- Subjects
- *
FIELD-effect transistors , *CARBON nanotubes , *ELECTRONIC equipment , *INTEGRATED circuits , *CHLORINATION , *DIODES - Abstract
As the key to manufacturing large scale integrated circuits, horizontally aligned semiconducting single-walled carbon nanotube (s-SWNT) arrays play a key role in the next-generation electronic device. Though various techniques have been developed, obtaining pure s-SWNT horizontal arrays is still the greatest challenge. Here, we propose an effective and facile method to produce s-SWNT arrays from a diverse perspective by implementing photochemical chlorination on the as-grown aligned SWNT arrays. The electrical measurements demonstrate a high fraction of s-SWNTs (>98.1%) after photochlorination, and its exceptional performance as a field-effect transistor with an on-off ratio up to 3730. Meanwhile, through the well-controlled mask-assisted photochlorination, a type of metallic-semiconducting SWNT intramolecular junction with rectifying diode and non-linear transport characteristics has also been successfully obtain. Our work provides a new method for the preparation of high-purity s-SWNT arrays and SWNT intramolecular junction, which has great significance for the carbon-based nano-electronic devices in applications. [Display omitted] • Transition from m-SWNT to s-SWNT. • Selective modification to s-SWNT. • Less damage and contamination to the samples. • Convenient and simple. • Area-selected method to fabricate SWNT intramolecular junction. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
5. Polymer-incorporated modified halloysite nanotubes for efficient CO2/N2 separation.
- Author
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Li, Xiaoyu, Li, Haoran, and Peng, Kang
- Subjects
- *
DRY ice , *CARBON dioxide , *RAW materials , *SURFACE energy , *HALLOYSITE - Abstract
Mixed-matrix membranes (MMMs) as one of solid sorbents for carbon dioxide (CO 2) separation face the challenge of merging efficient separation with economical preparation process using scalable raw material. Halloysite nanotubes (Hal) with unique one-dimensional gas transmission channels have great prospect in MMMs for gas separation. However, the insufficient porosity of Hal has restricted further development of CO 2 separation performances. Herein, a facile and efficient modification approach was carried out, involving successive treatments of calcination and selective leaching. The resulting nanotubes with continuous channel systems (CA-Hal) are embedded in poly(ether- block -amide) for the preparation of mixed-matrix membranes with enhanced gas transport. The performances of MMMs with modified nanotubes as inorganic fillers obtained by different modification methods (calcination, selective leaching, and a combination of calcination and selective leaching) were specifically discussed. CA-Hal with the highest specific surface area and certain surface energy has an excellent potential as inorganic fillers, which can be uniformly dispersed in the polymer matrix to form interfacial channels, preventing the particle agglomeration and producing non-selective interfacial defects. The hierarchical porous structure of CA-Hal can serve as fast gas transport channels in MMMs for efficient CO 2 diffusion and enhanced separation. The MMMs containing 5 wt% CA-Hal have demonstrated excellent CO 2 permeability (179.5 Barrer), CO 2 diffusivity (17.56 10−7 cm2·S−1) and CO 2 /N 2 selectivity (98.7). In addition, the prepared MMMs exhibits improved mechanical properties compared with the pure membrane without inorganic fillers. Manipulating the porosity and surface properties of natural halloysite (HNTs) fillers with continuous channel systems via calcination and selective acid leaching in the pebax-based mixed-matrix membranes (MMMs) could establish fast gas transport pathways in MMMs for efficient CO 2 diffusion and enhanced separation. [Display omitted] • Modified halloysite nanotubes were embedded in Pebax to fabricated mixed matrix membrane. • Manipulating filler's porosity can provide unique pathways to boost CO 2 /N 2 separation. • Dispersion of modified halloysite with more defect sites in membranes promoted gas diffusion. • Pebax-incorporated modified halloysite showed highly efficient CO 2 /N 2 separation. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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6. Selective modification of dual phase steel DP 1000 by laser action using diffractive optical element
- Author
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Serguei Murzin and Maksim Blokhin
- Subjects
laser action ,beam shaping ,diffractive optical element ,collimator ,dual-phase steel ,selective modification ,structure ,Information theory ,Q350-390 ,Optics. Light ,QC350-467 - Abstract
Experimental studies of shaping a CO2 laser beam with a reflective diffractive optical element have been performed. To increase the aperture of the initial beam, we used a collimator containing a system of two plane-convex spherical ZnSe lenses. For the focal line formed with the diffractive optical element in combination with the collimator, in addition to a 1.3-fold increase in the length, a decrease in the maximum beam power density was found to occur in the laser spot. It was demonstrated that under the laser action it is possible to generate in a two-phase steel sample regions of full hardening, selective hardening, and annealing, alongside the initial structure. The formation of such structures is due to the distribution pattern of temperature fields and a difference in the cooling rate across the volume of the heat affected zone.
- Published
- 2019
- Full Text
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7. Cooperative Stapling of Native Peptides at Lysine and Tyrosine or Arginine with Formaldehyde.
- Author
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Li, Bo, Tang, Hong, Turlik, Aneta, Wan, Zhao, Xue, Xiao‐Song, Li, Li, Yang, Xiaoxiao, Li, Jiuyuan, He, Gang, Houk, Kendall N., and Chen, Gong
- Abstract
Stapling of peptides by intramolecular crosslinking of two neighboring amino acid side chains offers an important tool to modulate the structure and properties of peptides. In comparison to the stapling of artificially engineered peptide substrates, methods for stapling native peptides are more desirable for easier accessibility and genetic encodability. However, the existing strategy for selectivity control in the stapling of native peptides is relatively limited: the site of anchoring is often dominated by Cys, and the means for achieving the position selectivity among the same type of residues at different locations is lacking. We have developed a simple and powerful strategy for stapling native peptides at lysine residues with formaldehyde by the cooperation of nearby tyrosine or arginine residues. The stapling reactions can proceed with high efficiency and residue selectivity under mild conditions, and generate linchpins with distinct physiochemical properties. The new method for peptide stapling enables unique control of position‐selectivity for substrates bearing multiple reaction sites by reactivity that can be readily built in the peptide sequence. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
8. Structural Diversity using Hyp "Customizable Units": Proof‐of‐Concept Synthesis of Sansalvamide‐Related Antitumoral Peptides.
- Author
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Cuevas, Fernando, Saavedra, Carlos J., Romero‐Estudillo, Ivan, Boto, Alicia, Ordóñez, Mario, and Vergara, Irene
- Subjects
- *
CYCLIC peptides , *PEPTIDES , *CYCLIC compounds , *BIODIVERSITY , *PEPTIDE synthesis - Abstract
The potential of "customizable units" to generate structural diversity for biological screenings is highlighted in this proof‐of‐concept synthesis of new peptides related to the potent antitumoral Sansalvamide A. Using L‐4‐hydroxyproline (Hyp) as a customizable unit in a linear parent peptide, an improved procedure for selective peptide modification was developed. A divergent Hyp scission‐reductive amination process was carried out, affording five linear peptides with cationic residues, and notably, an N‐alkyl moiety that affected the conformation of the peptide. After two steps (saponification and macrocyclization), sixteen differently N1‐substituted linear and cyclic peptides were obtained. For the first time, the activity of the linear and cyclic compounds was compared. Not only some linear analogs but also cyclic compounds with scarcely studied cationic residues were active against MCF7 breast cancer line. Thus, the structural diversity generated from customizable units can be valuable in drug discovery. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
9. Targeted immobilization of titanium (IV) on magnetic mesoporous nanomaterials derived from metal-organic frameworks for high-efficiency phosphopeptide enrichment in biological samples.
- Author
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Pu, Chenlu, Zhao, Hongli, Gu, Qinying, Zheng, Yu, and Lan, Minbo
- Subjects
- *
METAL-organic frameworks , *POROUS metals , *PHOSPHOPEPTIDES , *NANOSTRUCTURED materials , *METAL nanoparticles , *TITANIUM - Abstract
A selectively modified porous metal/carbon nanocomposite was fabricated to enhance the enrichment of low-abundance phosphopeptides from biological samples. The carbon matrix derived from the metal-organic framework provides a suitable pore size to allow the diffusion of peptides, while the deliberately modified metal nanoparticles within the pores enhance their interaction with the phosphopeptides. This nanocomposite shows extremely high enrichment selectivity for phosphopeptides in the MALDI-TOF MS detection, even when the molar ratio of α-casein digests versus bovine serum albumin digests was up to about 1:20,000. By combining such nanocomposite with nano-LC-MS/MS, 4556 unique phosphopeptides were identified with high selectivity (95.2%) from HeLa cell extracts. Furthermore, phosphopeptides from prostate tissue digests were also determined. A total of 277 and 1242 phosphopeptides were identified from normal and tumor tissues of a patient with prostate cancer, respectively. This indicates that phosphorylation and prostate cancer can be related to each other. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
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10. Plasmonic Z-scheme Pt-Au/BiVO4 photocatalyst: Synergistic effect of crystal-facet engineering and selective loading of Pt-Au cocatalyst for improved photocatalytic performance.
- Author
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Li, Yang, Liao, Dan, Li, Tianyi, Zhong, Wei, Wang, Xuefei, Hong, Xuekun, and Yu, Huogen
- Subjects
- *
PHOTOCATALYSTS , *ARTIFICIAL photosynthesis , *PHOTOREDUCTION , *PHOTOCATALYTIC oxidation , *OXYGEN reduction , *ENGINEERING , *SELECTIVE catalytic oxidation , *ELECTRONS - Abstract
• Plasmonic Pt-Au/BiVO 4 single-crystal photocatalyst was constructed. • It was synthesized using crystal-facet engineering and selective photodeposition. • The unique photocatalyst can promote consecutive separation of photocarriers. • They are resulted from orientation transfer of BiVO 4 , Z-scheme Au/BiVO 4 , and Au-Pt. Constructing Z-scheme photocatalysts is one of the most effective technologies to enhance the photocatalytic reduction or oxidation ability in artificial photosynthesis. For the BiVO 4 photocatalyst, it usually shows limited photocatalytic ability because of the severe bulk recombination of photogenerated carriers and the poor reduction reaction of photogenerated electrons. In this paper, a novel plasmonic Z-scheme Pt-Au/BiVO 4 single-crystal photocatalyst was constructed to solve the above issues. Here, Au nanoparticles are selectively deposited on the electron-rich (0 1 0) facet of BiVO 4 , while Pt nanoparticles are selectively modified on the Au surface. Photocatalytic results indicated that the resultant Pt-Au/BiVO 4 Z-scheme photocatalyst exhibits an obviously higher photocatalytic performance than pure BiVO 4 , Au/BiVO 4 , randomly deposited BiVO 4 (Pt-Au/BiVO 4 (R)) and conventional Pt-Au/BiVO 4. More importantly, compared with the well-known Pt/BiVO 4 (2.0 wt%), the Pt-Au/BiVO 4 not only exhibits a higher photocatalytic performance, but also loads a lower amount of high-cost Pt cocatalyst. The excellent photocatalytic activity of the plasmonic Z-scheme Pt-Au/BiVO 4 photocatalyst can be attributed to the synergistic effect of crystal-facet engineering and selective loading of Pt-Au, which results in the orientation transfer of photogenerated carriers in the single-crystal BiVO 4 , the enhanced reduction power of photogenerated electrons, and the rapid oxygen-reduction reaction on Pt cocatalyst. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
11. Cavitation Induced by Janus-Like Mesoporous Silicon Nanoparticles Enhances Ultrasound Hyperthermia
- Author
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Andrey Sviridov, Konstantin Tamarov, Ivan Fesenko, Wujun Xu, Valery Andreev, Victor Timoshenko, and Vesa-Pekka Lehto
- Subjects
porous silicon ,nanoparticles ,therapeutic ultrasound ,hyperthermia ,heating ,selective modification ,Chemistry ,QD1-999 - Abstract
The presence of nanoparticles lowers the levels of ultrasound (US) intensity needed to achieve the therapeutic effect and improves the contrast between healthy and pathological tissues. Here, we evaluate the role of two main mechanisms that contribute to the US-induced heating of aqueous suspensions of biodegradable nanoparticles (NPs) of mesoporous silicon prepared by electrochemical etching of heavily boron-doped crystalline silicon wafers in a hydrofluoric acid solution. The first mechanism is associated with an increase of the attenuation of US in the presence of NPs due to additional scattering and viscous dissipation, which was numerically simulated and compared to the experimental data. The second mechanism is caused by acoustic cavitation leading to intense bubble collapse and energy release in the vicinity of NPs. This effect is found to be pronounced for as-called Janus NPs produced via a nano-stopper technique, which allow us to prepare mesoporous NPs with hydrophobic inner pore walls and hydrophilic external surface. Such Janus-like NPs trap air inside the pores when dispersed in water. The precise measurement of the heating dynamics in situ enabled us to detect the excessive heat production by Janus-like NPs over their completely hydrophilic counterparts. The excessive heat is attributed to the high intensity cavitation in the suspension of Janus-like NPs. The present work elicits the potential of specifically designed Janus-like mesoporous silicon NPs in the field of nanotheranostics based on ultrasound radiation.
- Published
- 2019
- Full Text
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12. Selenizing chitooligosaccharide with site-selective modification to alleviate acute liver injury in vivo.
- Author
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Chen, Qiang, Wang, Lu, Li, Sirong, Lv, Dan, Li, Xinyi, Yin, Wenting, Hu, Ting, Li, Conghu, and Cheng, Xu
- Subjects
- *
LIVER injuries , *CYTOCHROME P-450 , *REACTIVE oxygen species , *GLUTATHIONE peroxidase , *AMINO group - Abstract
Two selenized chitooligosaccharide (O-Se-COS and N,O-Se-COS) with different sites modification were synthesized to alleviate liver injury in vivo. Comparing to traditional COS, both selenized COS exhibited enhanced reducibility as well as antioxidant capacity in vitro. Furthermore, O-Se-COS demonstrated superior efficacy in reducing intracellular reactive oxygen species (ROS) and mitochondrial damage compared to N,O-Se-COS as its enhanced cellular uptake by the positive/negative charge interactions. Two mechanisms were proposed to explained these results: one is to enhance the enzymatic activity of superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px), which effectively scavenge free radicals; the other is to down-regulate intracellular cytochrome P450 (CYP2E1) levels, inhibiting carbon tetrachloride (CCl 4)-induced peroxidation damage. In vivo studies further demonstrated the effective alleviation of CCl 4 -induced liver injury by selenized COS, with therapeutic efficacy observed in the following order: O-Se-COS > N,O-Se-COS > COS. Finally, hemolysis and histological tests confirmed the biosafety of both selenized COS. Taken together, these finding demonstrated that selenium has the potential to improve the biological activity of COS, and precise selenylation was more conducive to achieving the synergistic effect where 1 + 1>2. [Display omitted] • O-Se-COS is synthesized by the protection/de-protection strategy. • O-Se-COS enhance cells internalization by holding abundant amino groups. • Selenizing COS relieve oxidative damage by increasing the activity of SOD and GSH-Px. • Selenizing COS reduce liver inflammatory by decreasing the levels of CYP2E1 and IL-6. • Selenizing COS reduce the toxicity of inorganic selenium. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
13. Tyrosine bioconjugation with hypervalent iodine
- Author
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Nina Declas, John R. J. Maynard, Laure Menin, Natalia Gasilova, Sebastian Götze, Jakob L. Sprague, Pierre Stallforth, Stefan Matile, and Jerome Waser
- Subjects
small molecules ,residues ,selective modification ,strategies ,peptides ,reagents ,therapeutics ,amino-acid ,General Chemistry ,delivery ,proteins - Abstract
Hypervalent iodine reagents have recently emerged as powerful tools for late-stage peptide and protein functionalization. Herein we report a tyrosine bioconjugation methodology for the introduction of hypervalent iodine onto biomolecules under physiological conditions. Tyrosine residues were engaged in a selective addition onto the alkynyl bond of ethynylbenziodoxolones (EBX), resulting in stable vinylbenziodoxolones (VBX) bioconjugates. The methodology was successfully applied to peptides and proteins and tolerated all other nucleophilic residues, with the exception of cysteine. The generated VBX were further functionalized by palladium-catalyzed cross-coupling and azide-alkyne cycloaddition reactions. The method could be successfully used to modify bioactive natural products and native streptavidin to enable thiol-mediated cellular uptake.
- Published
- 2022
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14. Highly selective chemical modification of poly-His tagged peptides and proteins.
- Author
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Møller DN, Kofoed C, Thygesen MB, Sørensen KK, and Jensen KJ
- Subjects
- Acylation, Esters chemistry, Peptides chemistry, Histidine chemistry, Proteins chemistry
- Abstract
Chemical modifications to proteins have wide applications. They may be used in, for example, the production of biopharmaceuticals and fluorescent probes. Despite their importance, highly regioselective chemical protein modifications are often challenging to achieve. We have developed two highly selective methods for protein acylation using poly-His tags inserted either at the N-terminus or in combination with a specific Lys residue. For this, we used an N-terminal Gly-His
6 (Gly-His tag) or the sequence Hism -Lys-Hisn (Lys-His tag), respectively. The Gly-His tag directed the acylation to the N-terminal Nα -amine when reacted with 4-methoxyphenyl esters to yield stable conjugates. Next, the Lys-His tag was developed to allow modifications at the C-terminus or in loop regions of proteins. This gave a high selectivity of acylation of the designated Lys Nε -amine in the tag over native Lys residues in the protein under mild conditions. Here, we describe the synthesis of aromatic esters carrying different functionalities and reactivity tuning substituents on the phenol. The expression of poly-His tagged proteins, and the procedure for the highly selective peptide and protein acylations are detailed in this contribution. The versatility of these methods has been demonstrated by the attachment of different functionalities such as fluorophores, biotin, and azides to different proteins and an antibody., (Copyright © 2024. Published by Elsevier Inc.)- Published
- 2024
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15. Selective modification of kaolinite with vinyltrimethoxysilane for stabilization of Pickering emulsions.
- Author
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Liang, Shaobin, Li, Cunjun, Dai, Luxun, Tang, Qi, Cai, Xiaolong, Zhen, Bowen, Xie, Xiangli, and Wang, Linjiang
- Subjects
- *
KAOLINITE , *CLAY minerals , *EMULSION testing , *WETTING , *COVALENT bonds - Abstract
Amphiphilically modified kaolinite was produced by the modification of the octahedral surface of kaolinite with vinyltrimethoxysilane for use in the stabilization of Pickering emulsions. The covalent grafting of the hydrolysate of vinyltrimethoxysilane on the kaolinite octahedral surface resulted in kaolinite exhibiting dual-surface affinity. Further, the surface wettability of the modified kaolinite could be tuned by regulating the reaction temperature. Investigations of emulsions stabilized using the modified kaolinite samples indicated that the emulsion stability was significantly higher. In addition, the phenomenon of phase inversion could be controlled based on the wettability of the modified kaolinite. The highest stability of emulsion was observed when the emulsion droplet size was the lowest and the emulsion viscosity was the highest at the phase-inversion point. These findings should lead to the development of methods for preparing amphiphilic surface-active emulsifiers as well as the production of the desired types of emulsions at a given water/oil ratio. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
16. Post‐Translational Backbone Engineering through Selenomethionine‐Mediated Incorporation of Freidinger Lactams.
- Author
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Flood, Dillon T., Yan, Nicholas L., and Dawson, Philip E.
- Subjects
- *
SELENOMETHIONINE , *AQUEOUS solutions , *CHEMICAL synthesis , *LACTAMS , *STABILIZING agents - Abstract
Abstract: Amino‐γ‐lactam (Agl) bridged dipeptides, commonly known as Freidinger lactams, have been shown to constrain peptide backbone topology and stabilize type II′ β‐turns. The utility of these links as peptide constraints has inspired new approaches to their incorporation into complex peptides and peptoids, all of which require harsh reaction conditions or protecting groups that limit their use on unprotected peptides and proteins. Herein, we employ a mild and selective alkylation of selenomethionine in acidic aqueous solution, followed by immobilization of the alkylated peptide on to bulk reverse‐phase C18 silica and base‐induced lactamization in DMSO. The utilization of selenomethionine, which is readily introduced by synthesis or expression, and the mild conditions enable selective backbone engineering in complex peptide and protein systems. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
17. Selective Modifications of Calix[6]arenes
- Author
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Lüning, Ulrich, Löffler, Frank, Eggert, Jan, Asfari, Zouhair, editor, Böhmer, Volker, editor, Harrowfield, Jack, editor, Vicens, Jacques, editor, and Saadioui, Mohamed, editor
- Published
- 2001
- Full Text
- View/download PDF
18. Adsorption Efficiency of Polyaspartate-Montmorillonite Composite Towards the Removal of Pb(II) and Cd(II) from Aqueous Solution.
- Author
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Elsherbiny, Abeer S., El-Hefnawy, Mohamed E., and Gemeay, Ali H.
- Subjects
MONTMORILLONITE ,ADSORPTION (Chemistry) ,HEAVY metals - Abstract
The selective modification of sodium montmorillonite (Na
+ -Mt) surface with polyionene followed by poly (succinimde-co -aspartate) has been considered. Na+ -Mt was allowed to react with well characterized polyionene in two fold excess. The resulting polyionene/Mt (IC) was further modified with poly (succinimide-co -aspartate) through an ion exchange process. The obtained polyaspartate/Mt (IPS) composite was characterized by elemental analysis, X-ray diffraction, FTIR spectroscopy, thermogravimetric analysis (TGA), scanning electron microscopy (SEM), and BET surface analyzer. The adsorption efficiency of IPS composite was investigated for the removal of Pb(II) and Cd(II) from aqueous solution under different experimental conditions including initial metal ions concentration, temperature and single and binary mixture systems of metal ions. The experimental data were analyzed by Langmuir, Freundlich, Temkin, and Dubinin-Radushkevich models. Langmuir model reveals that the monolayer adsorption capacity of IPS was 92.59 and 67.57 mg/g for Pb(II) and Cd(II), respectively. The modification of parent Na+ -Mt enhanced their adsorption capacity by about 87.91 and 29.84% for Pb(II) and Cd(II), respectively, due to inclusion of extra active sites of polyaspartate. The mean sorption energy,E calculated from Dubinin–Radushkevich isotherm were 2.75 and 1.98 kJ/mol for the adsorption of Pb(II) and Cd(II), respectively, indicating physical adsorption process. Also, The thermodynamic parameters were calculated and indicated that the adsorption was spontaneous and exothermic process. The mechanism of cation exchange and complexation of metal ions was suggested. IPS composite has a considerable potential for the removal of heavy metal ions from aqueous solution and wastewater stream. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
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19. Selective modification of inner surface of halloysite nanotubes: a review.
- Author
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Hailei Zhang
- Subjects
HALLOYSITE ,NANOCOMPOSITE materials ,X-ray diffraction ,CRYSTAL structure ,SURFACE chemistry - Abstract
In this paper, we review the chemical strategies used for the modification of the inner surface of halloysite nanotubes (HNTs). The HNTs are nanotubular materials formed by rolling up the 1:1 aluminosilicate clays, where the composition is similar with kaolin. Owing to many virtues, including the high ratio of length to diameter, large cavity volume, desirable biocompatibility, and low cost, the HNTs have been applied to numerous promising domains. The modification of the outer surface is usually intended to decrease the HNT dispersal in aqueous media. Considering that the selective modification for the inner surface gives excellent prospects for hybrid HNT-based materials, herein, we explore the advances in the selective modification of the inner surface that expanded the applications of the HNTs. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
20. Characterization of the selective alkylation site in hemoglobin A by dihydroartemisinin with tandem mass spectrometry.
- Author
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Tiensomjitr, Khomsan, Prabpai, Samran, and Kongsaeree, Palangpon
- Subjects
- *
ARTEMISININ derivatives , *ALKYLATION , *TANDEM mass spectrometry , *ANTIMALARIALS , *HEMOGLOBINS - Abstract
The reaction between the antimalarial drug dihydroartemisinin (DHA) and hemoglobin A (HbA) was investigated in vitro. A fluorescein-tagged artemisinin analog reacted with HbA and fluorescent HbA-drug adducts could be visualized on SDS-PAGE to confirm stable covalent reaction adducts and necessity of the endoperoxide moiety and Fe(II). Mass spectrometric analyses revealed that DHA favourably alkylated protein part rather than heme and the modification site was identified to be at Tyr35 of the beta globin chain. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
21. Preparation of Janus-type catalysts and their catalytic performance at emulsion interface.
- Author
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Liu, Yijiang, Hu, Jiankang, Yu, Xiaotian, Xu, Xinyu, Gao, Yong, Li, Huaming, and Liang, Fuxin
- Subjects
- *
EMULSIONS , *CHEMICAL sample preparation , *INTERFACES (Physical sciences) , *METAL nanoparticles , *JANUS particles - Abstract
Two Janus-type catalysts were synthesized by selective modification and further functionalization with metal nanoparticles on one or both beads of snowman-like Janus particles. The catalytic performance of Janus-type catalysts both in homogeneous and interfacial reaction systems was systematically investigated using the reduction of nitro-compound as model reaction. The results showed that Janus-type catalysts have excellent catalytic activity in homogeneous reaction system and they are easy to recycle. Further, the Janus-type catalysts exhibited more efficient catalytic activity at emulsion interface than that of oil-water biphasic interface due to the exposed Au nanoparticles on snowman-like Janus particles offer high accessibility to reactants. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
22. Achieving exceptional strength-ductility synergy in a dual-phase high entropy alloy via architected complex microstructures.
- Author
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Liu, Liyuan, Zhang, Yang, Zhang, Zhongwu, Wang, Zhengqin, and Sun, Lixin
- Subjects
- *
BODY centered cubic structure , *FACE centered cubic structure , *MICROSTRUCTURE , *STRAIN hardening , *TENSILE strength - Abstract
In this work, the exceptional strength-ductility synergy of a dual-phase high entropy alloy (HEA) is achieved by architecting complex microstructures. The HEA rolled at 700 °C shows the yield strength and tensile strength as high as 1580 MPa and 1854 MPa with ductility of ∼18.4%. Different flow stress regions (face-centered cubic (FCC) and body-centered cubic (BCC) phases) divided by complex microstructures lead to strong hetero-deformation-induced strain hardening. The dispersed micro-strain band and the precipitates buffering the dislocation in front of the heterogeneous phase boundary also help to improve the ductility. In addition, utilizing the sensitivity difference between FCC and BCC phases for dislocation accumulation, more dislocations are accumulated in FCC phase to reduce the mechanical incompatibility with BCC phase and fully release the strain hardening ability. The strategy of architecting complex microstructures and selectively modifying phases will be beneficial to the development of high-performance dual-phase alloys. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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23. Selective Modifications of Cyclodextrins
- Author
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Khan, Abdul Rauf, Forgo, Peter, Stine, Keith J., D’Souza, Valerian T., Labandeira, J. J. Torres, editor, and Vila-Jato, J. L., editor
- Published
- 1999
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24. The Complexation of New 1,3-Dithiocalix[4]arene Containing Oxime Derivative
- Author
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Coşkun, Naciye Yilmaz, Yalçin, Sabiha Manav, Gürek, Ayşe Gül, Ahsen, Vefa, and Şener, Bilge, editor
- Published
- 2002
- Full Text
- View/download PDF
25. Structural Diversity using Hyp “Customizable Units”: Proof‐of‐Concept Synthesis of Sansalvamide‐Related Antitumoral Peptides
- Author
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Consejo Nacional de Ciencia y Tecnología (México), Ministerio de Economía y Empresa (España), Ministerio de Ciencia e Innovación (España), Biosigma, Cuevas, Fernando, Saavedra, Carlos J., Romero-Estudillo, Iván, Boto, Alicia, Ordóñez, Mario, Vergara, Irene, Consejo Nacional de Ciencia y Tecnología (México), Ministerio de Economía y Empresa (España), Ministerio de Ciencia e Innovación (España), Biosigma, Cuevas, Fernando, Saavedra, Carlos J., Romero-Estudillo, Iván, Boto, Alicia, Ordóñez, Mario, and Vergara, Irene
- Abstract
The potential of “customizable units” to generate structural diversity for biological screenings is highlighted in this proof‐of‐concept synthesis of new peptides related to the potent antitumoral Sansalvamide A. Using L‐4‐hydroxyproline (Hyp) as a customizable unit in a linear parent peptide, an improved procedure for selective peptide modification was developed. A divergent Hyp scission‐reductive amination process was carried out, affording five linear peptides with cationic residues, and notably, an N‐alkyl moiety that affected the conformation of the peptide. After two steps (saponification and macrocyclization), sixteen differently N1‐substituted linear and cyclic peptides were obtained. For the first time, the activity of the linear and cyclic compounds was compared. Not only some linear analogs but also cyclic compounds with scarcely studied cationic residues were active against MCF7 breast cancer line. Thus, the structural diversity generated from customizable units can be valuable in drug discovery.
- Published
- 2021
26. Synthesis of amphiphilic aminated inulin via ‘click chemistry’ and evaluation for its antibacterial activity.
- Author
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Dong, Fang, Zhang, Jun, Yu, Chunwei, Li, Qing, Ren, Jianming, Wang, Gang, Gu, Guodong, and Guo, Zhanyong
- Subjects
- *
AMPHIPHILE synthesis , *INULIN , *CLICK chemistry , *ANTIBACTERIAL agents , *POLYSACCHARIDES , *STAPHYLOCOCCUS aureus - Abstract
Inulins are a group of abundant, water-soluble, renewable polysaccharides, which exhibit attractive bioactivities and natural properties. Improvement such as chemical modification of inulin is often performed prior to further utilization. We hereby presented a method to modify inulin at its primary hydroxyls to synthesize amphiphilic aminated inulin via ‘click chemistry’ to facilitate its chemical manipulation. Additionally, its antibacterial property against Staphylococcus aureus ( S. aureus ) was also evaluated and the best inhibitory index against S. aureus was 58% at 1 mg/mL. As the amphiphilic aminated inulin is easy to prepare and exhibits improved bioactivity, this material may represent as an attractive new platform for chemical modifications of inulin. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
27. Chemical design of pH-sensitive nanovalves on the outer surface of mesoporous silicas for controlled storage and release of aromatic amino acid.
- Author
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Roik, N.V. and Belyakova, L.A.
- Subjects
- *
HYDROGEN-ion concentration , *AMINO acids , *MESOPOROUS materials , *AMMONIA , *SILICA , *SOLUTION (Chemistry) - Abstract
Abstract: Mesoporous silicas with hexagonally arranged pore channels were synthesized in water–ethanol-ammonia solution using cetyltrimethylammonium bromide as template. Directed modification of silica surface with N-[N′-(N′-phenyl)-2-aminophenyl]-3-aminopropyl groups was realized by postsynthetic activation of halogenoalkylsilicas, which have surface uniformly or selectively distributed 3-chloropropyl groups, with 2-aminodiphenylamine in the liquid phase. Chemical composition of silica materials was estimated by IR spectroscopy and chemical analysis of the surface products of reactions. Characteristics of porous structure of MCM-41-type silicas were determined from X-ray and low-temperature nitrogen ad-desorption measurements. Release ability of synthesized silica carriers was established on encapsulation of 4-aminobenzoic acid in pore channels and subsequent delivery at pH=6.86 and pH=1.00. It was found that N-[N′-(N′-phenyl)-2-aminophenyl]-3-aminopropyl groups block pore entrances at neutral pH preventing 4-aminobenzoic acid release. At pH=1.00 repulsion of positively charged surface aromatic amino groups localized near pore orifices provides unhindered liberation of aromatic amino acid from mesoporous channels. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
28. Enhancement of detection by selective modification of silicon nanobelt field-effect transistors via localized Joule heating.
- Author
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Liu, Hao Heng, Lin, Tzung Han, and Sheu, Jeng-Tzong
- Subjects
- *
SILICON nanowires , *CHEMICAL detectors , *NANOBELTS , *FIELD-effect transistors , *LOCALIZATION (Mathematics) , *RESISTANCE heating - Abstract
Highlights: [•] Selective ablation of SAM mPEG-sil via localized Joule heating in vacuum was optimized and performed for silicon nanobelt field-effect transistor (SNFET). [•] Unlike resistive device, the ablated region is located at the p− regions and shifts to the drain side of the SNFET as a result of impact ionization. [•] Fluorescence image of selective modification presents consistent results with the LFM images. [•] The sensing response rate for selectively modified SNFET is twice as fast as the non-selectively modified one. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
29. Synthesis and antifungal properties of 6-amino-6-deoxyinulin, a kind of precursors for facile chemical modifications of inulin
- Author
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Ren, Jianming, Wang, Pibo, Dong, Fang, Feng, Yan, Peng, Dejin, and Guo, Zhanyong
- Subjects
- *
ANTIFUNGAL agents , *INULIN , *ORGANIC synthesis , *WATER-soluble polymers , *POLYSACCHARIDES , *JERUSALEM artichoke , *BIODEGRADATION , *POLYMERS - Abstract
Abstract: Inulin, a kind of abundant, water-soluble, renewable polysaccharide, is mainly extracted from such low-requirement crops as Jerusalem artichoke, chicory, and yacon. The objective of this study was to modify inulin at its primary hydroxyls to give 6-amino-6-deoxyinulin, allowing for the facile chemical manipulation of inulin to encourage the employment of this currently underutilized biodegradable and environmentally benign resource. Additionally, its antifungal properties against two strains of phytopathogens, Cladosporium cucumerinum (Ell.) et Arthur and Fusarium oxysporum sp. Cucumis sativus L., were also evaluated by hypha measurement in vitro and the inhibitory indices against these two fungi were 60.1% and 53.3% at 1000μg/mL, respectively. Because 6-amino-6-deoxyinulin is easy to prepare and exhibits improved potential activities, this material may represent an attractive new platform for chemical modifications of inulin. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
30. Regioselective allylation of cyclomaltoheptaose (β-cyclodextrin) leading to per(2,6-di-O-hydroxypropyl-3-O-methyl)-β-cyclodextrin
- Author
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Eskandani, Zahra, Huin, Cécile, and Guégan, Philippe
- Subjects
- *
CYCLODEXTRINS , *METHYL groups , *HYDROXYL group , *METHYL iodide , *HYDROBORATION , *OXIDATION - Abstract
Abstract: The selective modification of cyclodextrins remains a real challenge to obtain well-defined structures. The targeted cycloheptakis-(1→4)-2,6-di-O-hydroxypropyl-3-O-methyl-α-d-glucopyranosyl [per(2,6-di-O-hydroxypropyl-3-O-methyl)-β-CD] was obtained by a three-step procedure. The selective allylation of the hydroxyl functions at the positions 2 and 6 was used as a first step. This reaction was revisited then enlarged to α and γ-CDs to determine new conditions for a one-step synthesis in high yield. The per(2,6-di-O-allyl)-β-CD derivative was then reacted with iodomethane to provide per(2,6-di-O-allyl-3-O-methyl)-β-CD. Oxidative hydroboration of the allyl functions was then carried out in order to obtain a new CD derivative with seven primary hydroxyl functions on each side of the truncated cone, having a similar reactivity. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
31. Selective surface modification of activated carbon for enhancing the catalytic performance in hydrogen peroxide production by hydroxylamine oxidation
- Author
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Song, Wei, Li, Yong, Guo, Xiaohui, Li, Juan, Huang, Xiumin, and Shen, Wenjie
- Subjects
- *
HYDROGEN peroxide , *ACTIVATED carbon , *POTASSIUM permanganate , *SURFACE chemistry , *HYDROXYLAMINE , *OXIDATION , *CHEMICAL structure - Abstract
Abstract: The textural structure and the surface property of activated carbon were selectively modified by KMnO4 oxidation. The activated carbon treated by KMnO4 oxidation in an acidic solution showed greatly enhanced H2O2 production by hydroxylamine oxidation due to the creation of more surface quinoid species, and the yield of hydrogen peroxide approached 78% (0.66wt.%). Structure and surface analyses revealed that KMnO4 oxidation in the acidic solution produced more phenolic but less carboxylic groups on the activated carbon, confirming the crucial role of the quinoid groups. It was further proposed that the quinoid groups serving as electron acceptors and redox mediators involved in the formation of H2O2 through a redox cycle. [Copyright &y& Elsevier]
- Published
- 2010
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- View/download PDF
32. Current strategies for in vitro protein glycosylation
- Author
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Khmelnitsky, Yuri L.
- Subjects
- *
GLYCOSYLATION , *PROTEINS , *DRUGS , *CARBOHYDRATES , *PEPTIDES - Abstract
Natural glycoproteins are mixtures of multiple glycoforms possessing identical peptide backbones, but differing in composition of glycan parts. This microheterogeneity presents a serious challenge in pharmaceutical applications of glycoproteins, where well-characterized and reproducible structural characteristics are required. Due to the growing importance of biopharmaceutical glycoconjugates, a wide variety of practical approaches to the preparation of glycosylated proteins and oligopeptides have been developed in recent years, with emphasis on strategies for selective glycosylation. This review presents a concise summary of concepts and synthetic approaches currently employed in glycoprotein chemistry. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
33. Facile preparation of mono-2-O-modified eicosa-O-methylcyclomaltoheptaoses (-β-cyclodextrins)
- Author
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Suzuki, Masato and Nozoe, Yutaka
- Subjects
- *
CYCLODEXTRINS , *ACETATES , *CARBAMATES , *CHEMISTRY - Abstract
Mono-2-O-benzylated eicosa-O-methylcyclomaltoheptaose (-β-cyclodextrin) was prepared in one pot from cyclomaltoheptaose (β-cyclodextrin) in 33% isolated yield and quantitatively converted to mono-2-OH-free eicosa-O-methylcyclomaltoheptaose, which is the key compound for further modification. Transformation of this 2-OH group successfully gave several mono-2-O-modified eicosa-O-methylcyclomaltoheptaoses such as the acetate, the N,N-dimethylcarbamate, the N-n-butylcarbamate, the methanesulfonate, and the S-methyldithiocarbonate. [Copyright &y& Elsevier]
- Published
- 2002
- Full Text
- View/download PDF
34. Cavitation Induced by Janus-Like Mesoporous Silicon Nanoparticles Enhances Ultrasound Hyperthermia
- Author
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Victor Yu. Timoshenko, A.P. Sviridov, Valery G. Andreev, Ivan N. Fesenko, Wujun Xu, Vesa-Pekka Lehto, and Konstantin Tamarov
- Subjects
inorganic chemicals ,Materials science ,Silicon ,selective modification ,medicine.medical_treatment ,Nanoparticle ,chemistry.chemical_element ,hydrophilic ,heating ,02 engineering and technology ,010402 general chemistry ,Porous silicon ,01 natural sciences ,lcsh:Chemistry ,medicine ,Crystalline silicon ,hydrophobic ,Original Research ,Aqueous solution ,Therapeutic ultrasound ,technology, industry, and agriculture ,General Chemistry ,021001 nanoscience & nanotechnology ,hyperthermia ,0104 chemical sciences ,Chemistry ,porous silicon ,lcsh:QD1-999 ,Chemical engineering ,chemistry ,therapeutic ultrasound ,Cavitation ,nanoparticles ,0210 nano-technology ,Mesoporous material - Abstract
The presence of nanoparticles lowers the levels of ultrasound (US) intensity needed to achieve the therapeutic effect and improves the contrast between healthy and pathological tissues. Here, we evaluate the role of two main mechanisms that contribute to the US-induced heating of aqueous suspensions of biodegradable nanoparticles (NPs) of mesoporous silicon prepared by electrochemical etching of heavily boron-doped crystalline silicon wafers in a hydrofluoric acid solution. The first mechanism is associated with an increase of the attenuation of US in the presence of NPs due to additional scattering and viscous dissipation, which was numerically simulated and compared to the experimental data. The second mechanism is caused by acoustic cavitation leading to intense bubble collapse and energy release in the vicinity of NPs. This effect is found to be pronounced for as-called Janus NPs produced via a nano-stopper technique, which allow us to prepare mesoporous NPs with hydrophobic inner pore walls and hydrophilic external surface. Such Janus-like NPs trap air inside the pores when dispersed in water. The precise measurement of the heating dynamics in situ enabled us to detect the excessive heat production by Janus-like NPs over their completely hydrophilic counterparts. The excessive heat is attributed to the high intensity cavitation in the suspension of Janus-like NPs. The present work elicits the potential of specifically designed Janus-like mesoporous silicon NPs in the field of nanotheranostics based on ultrasound radiation.
- Published
- 2019
35. Surface Modification of Polycrystalline Diamond Compacts by Carbon Ion Irradiation
- Author
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Beata Tyburska, Xiaochun Li, Madhu Santosh K. Mutyala, Kornel F. Ehmann, Kumar Sridharan, Benjamin Maier, Lianyi Chen, and Ting-Chiang Lin
- Subjects
Materials science ,Material properties of diamond ,chemistry.chemical_element ,02 engineering and technology ,engineering.material ,01 natural sciences ,Industrial and Manufacturing Engineering ,Diamond type ,Artificial Intelligence ,0103 physical sciences ,Nuclear Experiment ,010302 applied physics ,diamond-based semiconductors ,business.industry ,Metallurgy ,polycrystalline diamond compact ,Diamond ,021001 nanoscience & nanotechnology ,Microstructure ,Crystallographic defect ,Semiconductor ,chemistry ,engineering ,Optoelectronics ,Surface modification ,Ion Irradiation ,0210 nano-technology ,business ,Carbon ,Selective modification - Abstract
Selective modification (e.g. defect creation and amorphization) of diamond surfaces is of interests for functional diamond-based semiconductors and devices. Bombarding the diamond surface with high energy radiation sources such as electron, proton, and neutrons, however, often result in detrimental defects in deep bulk regions under the diamond surface. In this study, we utilized high energy carbon ions of 3 MeV to bombard the polycrystalline diamond compact (PDC) specimen. The resultant microstructure of PDCs was investigated using micro Raman spectroscopy. The results show that the carbon bombardment successfully created point defects and amorphization in a shallow region of ∼500 nm deep on the diamond surface. The new method has great potential to allow diamond-based semiconductor devices to be used in numerous applications.
- Published
- 2016
- Full Text
- View/download PDF
36. Metal-enhanced fluorescence detection and degradation of tetracycline by silver nanoparticle-encapsulated halloysite nano-lumen.
- Author
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Xu, Jun, Zhang, Beibei, Jia, Lei, Bi, Ning, and Zhao, Tongqian
- Subjects
- *
TETRACYCLINE , *FLUORESCENCE , *SILVER , *NANOTUBES , *FOOD safety - Abstract
• Ag NPs were successfully loaded in the lumen of HNTs. • The MEF effect of the nanoprobe provided ultra-sensitive detection of TC. • The presence of Ag in the nanoprobe can also enhance the degradation of TC. The ultrasensitive detection and efficient degradation of tetracycline (TC) residues are important for improving food safety and protecting human health. In this paper, a smart silver-enhanced fluorescence platform for the ultrasensitive detection of TC was constructed via a simple and selective modification of the interior and external tubes of natural halloysite nanotubes. The thick pipe wall of this platform provides a natural defense and promotes metal-enhanced fluorescence effects, which subsequently accelerates the detection of TC. Moreover, the nanoplatform of the modified Ag nanoparticles can induce the separation of electrons and holes, thereby enhancing photocatalytic activity in TC degradation. This platform provides new opportunities for studying natural halloysite nanotubes and for simultaneously detecting and photodegrading other deleterious substances. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
37. Covalent Fluorescent Probes
- Author
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Haugland, Richard P. and Steiner, Robert F., editor
- Published
- 1983
- Full Text
- View/download PDF
38. Selective Covalent Modification of Membrane Components
- Author
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Sigrist, Hans, Zahler, Peter, and Martonosi, Anthony N., editor
- Published
- 1985
- Full Text
- View/download PDF
39. Hydrophobic Labeling and Cross-Linking of Membrane Proteins
- Author
-
Sigrist, Hans, Zahler, Peter, and Martonosi, Anthony N., editor
- Published
- 1982
- Full Text
- View/download PDF
40. Lessons learned from studying peptide chemistry and the development in mimicking its modularity in the design of a new oligomer using guanidiniums, alpha-diketones, and boronic acids
- Author
-
Hernandez, Erik Torres
- Subjects
- Peptide chemistry, Selective modification, Single-molecule protein sequencing, Fluorescence sequencing, Unnatural oligomers, Supramolecular oligomers, Unnatural peptides, Unnatural peptide high-ordered arrangement
- Abstract
Peptide chemistry is a versatile tool in the development of diverse compounds that can be applied in various contexts: biology, drug development, organic synthesis, chemo sensing, combinatorial library design, and unnatural foldamer formation. This chemistry is highly optimized that commercial instruments are available for the fast production of these compounds. Despite the optimization, there are new, engaging avenues scientists can still explore in this well-established field. Our work in the Anslyn group is currently focused to incorporate more functionality into peptides beyond the repertoire given by nature. These efforts are targeted for many uses as described in this dissertation. The lessons learned from synthetic peptide design have directed our group also to explore the development of new oligomer systems that take a modular approach in its elongation as used in peptide chemistry. The use of synthetically accessible monomers that are linked by a reliable reaction is the simple, but powerful guiding principle behind the work presented here. Chapter 2 describes the development of a methodology to modify peptides in a sequential and selective manner targeting the most reactive amino acids. The chemistry presented in this chapter serves as the basis for the synthesis of model peptides with fluorescent probes. In chapter 3, these fluorescently labeled peptides are used for proof-of-concept studies for a new single-molecule protein-sequencing platform. Inspiration taken from chapters 2 and 3 brings chemistries facilitating the introduction of ortho- (aminomethyl)boronic acids into peptides. Chapter 5 explores chemical modifications ligands allowing for induced higher-order structuring. Finally, Chapter 6 leaves the peptide space to explore a supramolecular oligomer that will serve as the foundation for a new backbone branched with side chain functionalities.
- Published
- 2017
41. Nano Air Seeds Trapped in Mesoporous Janus Nanoparticles Facilitate Cavitation and Enhance Ultrasound Imaging.
- Author
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Tamarov K, Sviridov A, Xu W, Malo M, Andreev V, Timoshenko V, and Lehto VP
- Subjects
- Contrast Media, Microbubbles, Polymers, Ultrasonography, Nanoparticles
- Abstract
The current contrast agents utilized in ultrasound (US) imaging are based on microbubbles which suffer from a short lifetime in systemic circulation. The present study introduces a new type of contrast agent for US imaging based on bioresorbable Janus nanoparticles (NPs) that are able to generate microbubbles in situ under US radiation for extended time. The Janus NPs are based on porous silicon (PSi) that was modified via a nanostopper technique. The technique was exploited to prepare PSi NPs which had hydrophobic pore walls (inner face), while the external surfaces of the NPs (outer face) were hydrophilic. As a consequence, when dispersed in an aqueous solution, the Janus NPs contained a substantial amount of air trapped in their nanopores. The specific experimental setup was developed to prove that these nano air seeds were indeed acting as nuclei for microbubble growth during US radiation. Using the setup, the cavitation thresholds of the Janus NPs were compared to their completely hydrophilic counterparts by detecting the subharmonic signals from the microbubbles. These experiments and the numerical simulations of the bubble dynamics demonstrated that the Janus NPs generated microbubbles with a radii of 1.1 μm. Furthermore, the microbubbles generated by the NPs were detected with a conventional medical ultrasound imaging device. Long systemic circulation time was ensured by grafting the NPs with two different PEG polymers, which did not affect adversely the microbubble generation. The present findings represent an important landmark in the development of ultrasound contrast agents which possess the properties for both diagnostics and therapy.
- Published
- 2017
- Full Text
- View/download PDF
42. Selective Modification of Halloysite Nanotubes with 1-Pyrenylboronic Acid: A Novel Fluorescence Probe with Highly Selective and Sensitive Response to Hyperoxide.
- Author
-
Zhang H, Ren T, Ji Y, Han L, Wu Y, Song H, Bai L, and Ba X
- Abstract
A novel fluorescence probe based on modified halloysite nanotubes (HNTs) by using 1-pyrenylboronic acid selectively grafted onto the inner surface of lumen was successfully achieved. The solid-state nuclear magnetic resonance ((13)C and (11)B), X-ray photoelectron spectroscopy (XPS) and Fourier transform infrared (FTIR) confirmed that the boronic acid group only binds to alumina at the tube lumen and does not bind the tube's outer siloxane surface. The modified HNTs (HNTs-PY) inherit the spectroscopic properties relating to the pyrene units. Interestingly, the established Al-O-B linkage gives the H2O2-sensitivity to pyrene grafted tubes. HNTs-PY exhibits a highly specific "turn-off" response for hyperoxide over other reactive oxygen species (ROS) and oxidative ions owing to their chemoselective boronate-to-phenol switch. The "turn-off" response can even be tracked when the additional amount of H2O2 was limited to 1 × 10(-6) mol. Thus, the selective modification method under mild conditions for the design of novel organic-inorganic hybrid fluorescence probe may open up a broader application as well as for identification and diagnosis.
- Published
- 2015
- Full Text
- View/download PDF
43. The emerging landscape of single-molecule protein sequencing technologies
- Author
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Patroklos Samaras, Cecil J Howard, Aleksei Aksimentiev, Amit Meller, Derek Stein, Mike Filius, Chan Cao, Rienk Eelkema, Georges Bedran, Adam Pomorski, David R. Goodlett, Zvi Kelman, Nicholas Drachman, Stuart Lindsay, Meni Wanunu, Sonja Schmid, Chirlmin Joo, Etienne Coyaud, Peggy R. Bohländer, Neil L. Kelleher, Giovanni Maglia, Ryan T. Kelly, Michael Mayer, Umesh Kalathiya, Edward M. Marcotte, Eric V. Anslyn, Mingjie Dai, Shilo Ohayon, Kumar Sarthak, Peng Yin, Sebastien Hentz, Sung Hyun Kim, Mauro Chinappi, Javier A. Alfaro, Gunnar Dittmar, John P. Marino, Christophe Masselon, Bernhard Kuster, David Rodriguez-Larrea, Mathias Wilhelm, Xander F. van Kooten, Cees Dekker, Lusia Sepiashvili, Swiss National Science Foundation, National Institutes of Health (US), Welch Foundation, US Army Research Office, Erisyon, National Institute of General Medical Sciences (US), Wyss Institute of Biologically Inspired Engineering, Harvard Medical School, Peter and Traudl Engelhorn Foundation, Netherlands Organization for Scientific Research, Azrieli Foundation, Paul G. Allen Family Foundation, National Science Foundation (US), Human Frontier Science Program, Polish National Agency for Academic Exchange, European Commission, European Research Council, Fonds National de la Recherche Luxembourg, Adolphe Merkle Foundation, Michael J. Fox Foundation for Parkinson's Research, Swiss National Supercomputing Centre, Foundation for Polish Science, Genome British Columbia, Genome Canada, Alfaro, Javier Antonio, Dai, Mingjie, Filius, Mike, Pomorski, Adam, Schmid, Sonja, Aksimentiev, Aleksei, Anslyn, Eric V., Cao, Chan, Hentz, Sébastien, Kalathiya, Umesh, Kelleher, Neil L., Kuster, Bernhard, Rodríguez-Larrea, David, Maglia, Giovanni, Marino, John P., Masselon, Christophe, Samaras, Patroklos, Stein, Derek, Wilhelm, Mathias, Yin, Peng, Meller, Amit, Joo, Chirlmin, University of Gdańsk (UG), Delft University of Technology (TU Delft), Harvard University, Harvard Medical School [Boston] (HMS), University of Texas at Austin [Austin], Technion - Israel Institute of Technology [Haifa], Wageningen University and Research [Wageningen] (WUR), University of Illinois at Urbana-Champaign [Urbana], University of Illinois System, Ecole Polytechnique Fédérale de Lausanne (EPFL), Università degli Studi di Roma Tor Vergata [Roma], CHU Lille, Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U 1192 (PRISM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lille-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille), Luxembourg Institute of Health (LIH), University of Luxembourg [Luxembourg], Brown University, University of Victoria [Canada] (UVIC), Commissariat à l'énergie atomique et aux énergies alternatives - Laboratoire d'Electronique et de Technologie de l'Information (CEA-LETI), Direction de Recherche Technologique (CEA) (DRT (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Université Grenoble Alpes (UGA), Northwestern University [Evanston], Brigham Young University (BYU), Institute for Bioscience and Biotechnology Research [Rockville, MD, États-Unis] (IBBR), University of Maryland [College Park], University of Maryland System-University of Maryland System, Technische Universität Munchen - Université Technique de Munich [Munich, Allemagne] (TUM), Universidad del Pais Vasco / Euskal Herriko Unibertsitatea [Espagne] (UPV/EHU), Arizona State University [Tempe] (ASU), University of Groningen [Groningen], Laboratoire de Biologie à Grande Échelle (BGE - UMR S1038), Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA), Université de Fribourg = University of Fribourg (UNIFR), University of Toronto, Northeastern University [Boston], Harvard University [Cambridge], University of Fribourg, Bruley, Christophe, INSERM, Université de Lille, Medical University of Gdańsk, Delft University of Technology [TU Delft], Wageningen University and Research [Wageningen] [WUR], Ecole Polytechnique Fédérale de Lausanne [EPFL], Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U1192, Technische Universität Munchen - Université Technique de Munich [Munich, Allemagne] [TUM], and Chemical Biology 1
- Subjects
Proteomics ,Computer science ,[SDV]Life Sciences [q-bio] ,BIOCONJUGATION ,Biophysics ,Settore ING-IND/06 ,Computational biology ,NATIVE PROTEINS ,Biochemistry ,Genome ,Article ,Mass Spectrometry ,03 medical and health sciences ,Protein sequencing ,Single-molecule biophysics ,Sequence Analysis, Protein ,Nanotechnology ,Life Science ,SELECTIVE MODIFICATION ,Molecular Biology ,030304 developmental biology ,Profiling (computer programming) ,0303 health sciences ,IDENTIFICATION ,Sequence Analysis, RNA ,Protein ,RECOGNITION ,Proteins ,PEPTIDES ,Cell Biology ,MASS-SPECTROMETRY ,Single Molecule Imaging ,TRANSLOCATION ,[SDV] Life Sciences [q-bio] ,Biofysica ,Cellular heterogeneity ,DISCRIMINATION ,NANOPORE ,Proteome ,RNA ,Identification (biology) ,Single-Cell Analysis ,Sequence Analysis ,Biotechnology - Abstract
Single-cell profiling methods have had a profound impact on the understanding of cellular heterogeneity. While genomes and transcriptomes can be explored at the single-cell level, single-cell profiling of proteomes is not yet established. Here we describe new single-molecule protein sequencing and identification technologies alongside innovations in mass spectrometry that will eventually enable broad sequence coverage in single-cell profiling. These technologies will in turn facilitate biological discovery and open new avenues for ultrasensitive disease diagnostics., S.S. acknowledges Postdoc Mobility fellowship no. P400PB 180889 from the Swiss National Science Foundation. E.M.M. and E.V.A. acknowledge funding from the NIH (R35 GM122480 and R01 DK110520 to E.M.M.), Welch Foundation (F1515 to E.M.M. and F-0046 to E.V.A.), Army Research Office grant W911NF-12-1-0390 and Erisyon. E.M.M. and E.V.A. are co-founders and shareholders of Erisyon. R.T.K. acknowledges funding from NIGMS (R01 GM138931). P.Y. acknowledges funding from an NIH Director’s New Innovator Award (1DP2OD007292), an NIH Transformative Research Award (1R01EB018659), an NIH Pioneer Award (1DP1GM133052), and the Molecular Robotics Initiative fund at the Wyss Institute for Biologically Inspired Engineering. M.D. acknowledges funding from a Systems Biology Department Fellowship from Harvard Medical School and a Technology Development Fellowship from Wyss Institute for Biologically Inspired Engineering. C.C. acknowledges the Peter and Traudl Engelhorn Foundation. C.D. acknowledges the ERC Advanced Grant Looping DNA (no. 883684) and the NWO programs NanoFront and Basyc., S.O. acknowledges the support of the Azrieli fellowship foundation. N.L.K. acknowledges funding from the Paul G. Allen Frontiers Program (11715), the NIH HuBMAP program (UH3 CA246635) and NIGMS (P41 GM108569). J.P.M. and Z.K. acknowledge internal funding from NIST and are co-inventors on patents relevant to this work. M. Wanunu acknowledges funding from the NIH (HG009186). K.S. and A.A. acknowledge funding from the NSF (PHY-1430124). C.J., C.D. and R.E. acknowledge funding from NWO-I (SMPS). C.J. acknowledges funding from HFSP (RGP0026/2019). A.P. acknowledges Bekker fellowship no. PPN/BEK/2018/1/00296 from the Polish National Agency for Academic Exchange. C.M. and S.H. acknowledge funding from the European Research Council (ERC ‘Enlightened’, GA 616251) and the CEA Transverse Program ‘Instrumentation and Detection’ (PTC-ID VIRIONEMS). Support from the Proteomics French Infrastructure (PROFI) is also gratefully acknowledged. G.D. acknowledges funding from FNR (C17/BM/11642138). M.M. acknowledges funding from the Adolphe Merkle Foundation, the Michael J. Fox Foundation for Parkinson’s Research (grant 17924) and the Swiss National Science Foundation (grant no. 200021-169304). A.M. acknowledges funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement no. 833399-ERC NanoProt-ID and ISF award 3485/19. M.C. acknowledges computational resources from CINECA (NATWE project) and the Swiss National Super-Computing Centre (CSCS), under projects sm11 and s865. E.C. acknowledges funding from I-Site Lille, Région Hauts-de-France, and the European Union’s Horizon 2020 Marie Skłodowska-Curie no. 843052. The study was supported by the project ‘International Centre for Cancer Vaccine Science’ that is carried out within the International Agendas Programme of the Foundation for Polish Science co-financed by the European Union under the European Regional Development Fund. D.G. thanks Genome Canada and Genome British Columbia for financial support for Genomics Technology Platforms (GTP) funding for operations and technology development (264PRO).
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