238 results on '"Scott J. Cotler,"'
Search Results
2. Theoretical modeling of hepatitis C acute infection in liver-humanized mice support pre-clinical assessment of candidate viruses for controlled-human-infection studies
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Zhenzhen Shi, Adquate Mhlanga, Yuji Ishida, Ari Josephson, Nicholson T. Collier, Hiromi Abe-Chayama, Chise Tateno-Mukaidani, Scott J. Cotler, Jonathan Ozik, Marian Major, Jordan J. Feld, Kazuaki Chayama, and Harel Dahari
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Hepatitis C virus ,Agent-based modeling ,Ordinary differential equations ,Liver-humanized mouse model ,Controlled human infection model ,Medicine ,Science - Abstract
Abstract Designing and carrying out a controlled human infection (CHI) model for hepatitis C virus (HCV) is critical for vaccine development. However, key considerations for a CHI model protocol include understanding of the earliest viral-host kinetic events during the acute phase and susceptibility of the viral isolate under consideration for use in the CHI model to antiviral treatment before any infections in human volunteers can take place. Humanized mouse models lack adaptive immune responses but provide a unique opportunity to obtain quantitative understanding of early HCV kinetics and develop mathematical models to further understand viral and innate immune response dynamics during acute HCV infection. We show that the models reproduce the measured HCV kinetics in humanized mice, which are consistent with early acute HCV-host dynamics in immunocompetent chimpanzees. Our findings suggest that humanized mice are well-suited to support development of a CHI model. In-silico and in-vivo modeling estimates provide a starting point to characterize candidate viruses for testing in CHI model studies.
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- 2024
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3. Quantitative morphometric analysis of hepatocellular carcinoma: development of a programmed algorithm and preliminary application
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Felix Y. Yap,, James T. Bui,, M. Grace Knuttinen,, Natasha M. Walzer,, Scott J. Cotler,, Charles A. Owens,, Jamie L. Berkes,, and Ron C. Gaba
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Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
PURPOSEThe quantitative relationship between tumor morphology and malignant potential has not been explored in liver tumors. We designed a computer algorithm to analyze shape features of hepatocellular carcinoma (HCC) and tested feasibility of morphologic analysis. MATERIALS AND METHODSCross-sectional images from 118 patients diagnosed with HCC between 2007 and 2010 were extracted at the widest index tumor diameter. The tumor margins were outlined, and point coordinates were input into a MATLAB (MathWorks Inc., Natick, Massachusetts, USA) algorithm. Twelve shape descriptors were calculated per tumor: the compactness, the mean radial distance (MRD), the RD standard deviation (RDSD), the RD area ratio (RDAR), the zero crossings, entropy, the mean Feret diameter (MFD), the Feret ratio, the convex hull area (CHA) and perimeter (CHP) ratios, the elliptic compactness (EC), and the elliptic irregularity (EI). The parameters were correlated with the levels of alpha-fetoprotein (AFP) as an indicator of tumor aggressiveness. RESULTSThe quantitative morphometric analysis was technically successful in all cases. The mean parameters were as follows: compactness 0.88±0.086, MRD 0.83±0.056, RDSD 0.087±0.037, RDAR 0.045±0.023, zero crossings 6±2.2, entropy 1.43±0.16, MFD 4.40±3.14 cm, Feret ratio 0.78±0.089, CHA 0.98±0.027, CHP 0.98±0.030, EC 0.95±0.043, and EI 0.95±0.023. MFD and RDAR provided the widest value range for the best shape discrimination. The larger tumors were less compact, more concave, and less ellipsoid than the smaller tumors (P < 0.0001). AFP-producing tumors displayed greater morphologic irregularity based on several parameters, including compactness, MRD, RDSD, RDAR, entropy, and EI (P < 0.05 for all). CONCLUSIONComputerized HCC image analysis using shape descriptors is technically feasible. Aggressively growing tumors have wider diameters and more irregular margins. Future studies will determine further clinical applications for this morphologic analysis.
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- 2013
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4. Modeling challenges of hepatitis D virus kinetics during bulevirtide-based therapy
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Adquate Mhlanga, Ori Wasserman, Pietro Lampertico, Scott J. Cotler, and Harel Dahari
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Published
- 2025
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5. Interferon alpha induces a stronger antiviral effect than interferon lambda in HBV/HDV infected humanized mice
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Sarah Duehren, Takuro Uchida, Masataka Tsuge, Nobuhiko Hiraga, Susan L. Uprichard, Ohad Etzion, Jeffrey Glenn, Christopher Koh, Theo Heller, Scott J. Cotler, Shiro Oka, Kazuaki Chayama, and Harel Dahari
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HBV DNA ,HDV RNA ,HBsAg ,Human albumin ,Humanized mice ,Interferon alpha ,Microbiology ,QR1-502 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Recent studies indicate that treatment of chronic hepatitis D virus (HDV) with either pegylated interferon (IFN)λ or pegylated IFNα monotherapy leads to a dramatic decline in HDV RNA. Herein, we investigated the innate antiviral efficacy of IFNλ and IFNα in humanized mice that lack an adaptive immune response. Humanized mice were either co-infected with hepatitis B virus (HBV) and HDV simultaneously, or HDV infection was performed subsequent to HBV infection (i.e., superinfected). After steady viral replication was achieved, mice received either IFNλ (n = 6) or IFNα (n = 7) for 12 (or 13) weeks. Pretreatment median levels of serum HBV DNA (8.8 [IQR:0.2] log IU/ml), HDV RNA (9.8 [0.5] log IU/ml), HBsAg (4.0 [0.4] log IU/ml) and human albumin, hAlb (6.9 [0.1] log ng/mL) were similar between mice treated with IFNα or IFNλ and between those coinfected versus superinfected. Compared to mice treated with IFNλ, mice treated with IFNα had a significantly greater decline in HBV, HDV, and HBsAg levels. In conclusion, IFNα induces stronger inhibition of HBV and HDV than IFNλ in humanized mice that lack an adaptive immune response. Further studies are needed to assess the respective role of the combined innate-and adaptive-immune systems in the treatment of HBV and HDV with IFNα and IFNλ.
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- 2024
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6. Modelling HDV kinetics under the entry inhibitor bulevirtide suggests the existence of two HDV-infected cell populations
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Louis Shekhtman, Scott J. Cotler, Elisabetta Degasperi, Maria Paola Anolli, Sara Colonia Uceda Renteria, Dana Sambarino, Marta Borghi, Riccardo Perbellini, Floriana Facchetti, Ferruccio Ceriotti, Pietro Lampertico, and Harel Dahari
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HDV RNA ,Bulevirtide ,mathematical modeling ,HBsAg ,ALT ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background & Aims: Bulevirtide (BLV) was approved for the treatment of compensated chronic hepatitis D virus (HDV) infection in Europe in 2020. However, research into the effects of the entry inhibitor BLV on HDV-host dynamics is in its infancy. Methods: Eighteen patients with HDV under nucleos(t)ide analogue treatment for hepatitis B, with compensated cirrhosis and clinically significant portal hypertension, received BLV 2 mg/day. HDV RNA, alanine aminotransferase (ALT), and hepatitis B surface antigen (HBsAg) were measured at baseline, weeks 4, 8 and every 8 weeks thereafter. A mathematical model was developed to account for HDV, HBsAg and ALT dynamics during BLV treatment. Results: Median baseline HDV RNA, HBsAg, and ALT were 4.9 log IU/ml [IQR: 4.4-5.8], 3.7 log IU/ml [IQR: 3.4-3.9] and 106 U/L [IQR: 81-142], respectively. During therapy, patients fit into four main HDV kinetic patterns: monophasic (n = 2), biphasic (n = 10), flat-partial response (n = 4), and non-responder (n = 2). ALT normalization was achieved in 14 (78%) patients at a median of 8 weeks (range: 4-16). HBsAg remained at pre-treatment levels. Assuming that BLV completely (∼100%) blocks HDV entry, modeling indicated that two HDV-infected cell populations exist: fast HDV clearing (median t1/2 = 13 days) and slow HDV clearing (median t1/2 = 44 days), where the slow HDV-clearing population consisted of ∼1% of total HDV-infected cells, which could explain why most patients exhibited a non-monophasic pattern of HDV decline. Moreover, modeling explained ALT normalization without a change in HBsAg based on a non-cytolytic loss of HDV from infected cells, resulting in HDV-free HBsAg-producing cells that release ALT upon death at a substantially lower rate compared to HDV-infected cells. Conclusion: The entry inhibitor BLV provides a unique opportunity to understand HDV, HBsAg, ALT, and host dynamics. Impact and implications: Mathematical modeling of hepatitis D virus (HDV) treatment with the entry inhibitor bulevirtide (BLV) provides a novel window into the dynamics of HDV RNA and alanine aminotransferase. Kinetic data from patients treated with BLV monotherapy can be explained by hepatocyte populations with different basal HDV clearance rates and non-cytolytic clearance of infected cells. While further studies are needed to test and refine the kinetic characterization described here, this study provides a new perspective on viral dynamics, which could inform evolving treatment strategies for HDV.
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- 2024
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7. Association of elevated serum aminotransferase levels with chronic kidney disease measures: hispanic community health study/study of latinos
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Celestin Missikpode, Holly Kramer, Scott J. Cotler, Ramon Durazo-Arvizu, James P. Lash, Eric Kallwitz, Jianwen Cai, Mark H. Kuniholm, Sylvia E. Rosas, Ana C. Ricardo, Gregory A. Talavera, Leopoldo Raij, Amber Pirzada, and Martha L. Daviglus
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NAFLD ,Chronic kidney disease ,Obesity ,Race/ethnicity ,Aminotransferase levels ,Hispanics/Latinos ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Background Previous studies have shown an association between non-alcoholic fatty liver disease (NAFLD) and chronic kidney disease (CKD), but it is unclear whether the association is independent of metabolic syndrome. Methods Data from 13,006 participants aged 18 to 74 years in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) without viral hepatitis, excessive alcohol consumption, or high transferrin saturation levels were analyzed. Suspected NAFLD was defined as presence of sex-specific elevations in serum aminotransferase levels (aspartate aminotransferase (AST) > 37 U/L or alanine aminotransferase (ALT) > 40 U/L for men and AST or ALT > 31 U/L for women). Logistic regression was used to examine cross-sectional associations of elevated serum aminotransferase levels with low estimated glomerular filtration rate (eGFR 17 mg/g in men and > 25 mg/ g in women) in separate models adjusting for demographic characteristics and metabolic syndrome. Results Mean (SD) age was 41 (0.27) years, and 45 % were male. Elevated serum aminotransferase levels were noted in 18.8 % of the population and were associated with greater odds of high UACR (OR = 1.31; 95 % CI = 1.10, 1.56) after adjusting for demographic characteristics; this association became non-significant after adjustment for metabolic syndrome (OR = 1.11, 95 % CI = 0.92, 1.33). In contrast, elevated serum aminotransferase levels were not associated with low eGFR (odds ratio (OR) = 0.73; 95 % confidence interval (CI) = 0.45, 1.18) after adjusting for covariates. Conclusions In this sample of diverse U.S. Hispanic Latino adults, elevated serum aminotransferase levels were not independently associated with measures of CKD.
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- 2021
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8. Multi-Objective Model Exploration of Hepatitis C Elimination in an Agent-Based Model of People who Inject Drugs.
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Eric Tatara, Nicholson T. Collier, Jonathan Ozik, Alexander Gutfraind, Scott J. Cotler, Harel Dahari, Marian Major, and Basmattee Boodram
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- 2019
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9. Modeling hepatitis C micro-elimination among people who inject drugs with direct-acting antivirals in metropolitan Chicago
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Eric Tatara, Alexander Gutfraind, Nicholson T. Collier, Desarae Echevarria, Scott J. Cotler, Marian E. Major, Jonathan Ozik, Harel Dahari, and Basmattee Boodram
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Medicine ,Science - Abstract
Hepatitis C virus (HCV) infection is a leading cause of chronic liver disease and mortality worldwide. Direct-acting antiviral (DAA) therapy leads to high cure rates. However, persons who inject drugs (PWID) are at risk for reinfection after cure and may require multiple DAA treatments to reach the World Health Organization’s (WHO) goal of HCV elimination by 2030. Using an agent-based model (ABM) that accounts for the complex interplay of demographic factors, risk behaviors, social networks, and geographic location for HCV transmission among PWID, we examined the combination(s) of DAA enrollment (2.5%, 5%, 7.5%, 10%), adherence (60%, 70%, 80%, 90%) and frequency of DAA treatment courses needed to achieve the WHO’s goal of reducing incident chronic infections by 90% by 2030 among a large population of PWID from Chicago, IL and surrounding suburbs. We also estimated the economic DAA costs associated with each scenario. Our results indicate that a DAA treatment rate of >7.5% per year with 90% adherence results in 75% of enrolled PWID requiring only a single DAA course; however 19% would require 2 courses, 5%, 3 courses and
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- 2022
10. Barriers to treatment of chronic hepatitis C with direct acting antivirals in an urban clinic
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Miguel Malespin, Ciel Harris, Ozdemir Kanar, Kelly Jackman, Carmen Smotherman, Abbey Johnston, Julie Ferm, Silvio W. de Melo, Jr, James S. Scolapio, David R. Nelson, and Scott J. Cotler
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Chronic hepatitis C ,Direct acting antivirals ,Barriers to treatment ,Psychosocial factors ,Specialties of internal medicine ,RC581-951 - Abstract
Introduction and aim: Direct-acting antiviral (DAA) agents are highly effective for treatment of chronic hepatitis C virus (HCV) yet access to treatment remains a serious challenge. The aim of this study was to identify barriers to treatment initiation with DAA-containing regimens in an urban clinic setting. Materials and methods: A retrospective cohort of all chronic HCV patients seen in an urban academic practice in Jacksonville, FL, USA from 1/2014 to 1/2017 was analyzed. Baseline characteristics were recorded and a review of medical records was performed to identify barriers to treatment initiation and overall success rates. Results: Two-hundred and forty patients with chronic HCV were analyzed. Fifty-six percent of patients were African-American and 63% were insured through Medicaid/county programs or uninsured. Sixty-nine percent had barriers to initiating antiviral therapy categorized as psychosocial (n = 112), provider (n = 26), medical (n = 20), and insurance-related factors (n = 7). The most commonly encountered psychosocial barriers included failure to keep appointments (79/240, 33%), active substance abuse (18/240, 8%), and failure to obtain laboratory testing (11/240, 5%). Overall, only 27% of patients evaluated were initiated on DAA-containing regimens with 18% reaching SVR12 within the 36-month study period. Conclusion: In conclusion, only 27% of patients who presented to an urban academic practice with chronic HCV received DAA-containing regimens over a 36-month period. Psychosocial issues were the major barriers to antiviral therapy. These findings illustrate the need for an integrated approach that addresses psychosocial factors as well as comorbidities and adherence to care in order to increase rates of HCV treatment in at risk patients.
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- 2019
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11. Modeling the Interplay between HDV and HBV in Chronic HDV/HBV Patients
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Adequate Mhlanga, Rami Zakh, Alexander Churkin, Vladimir Reinharz, Jeffrey S. Glenn, Ohad Etzion, Scott J. Cotler, Cihan Yurdaydin, Danny Barash, and Harel Dahari
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hepatitis delta virus ,hepatitis B virus ,anti-HDV treatment ,analytical solution ,Mathematics ,QA1-939 - Abstract
Hepatitis D virus is an infectious subviral agent that can only propagate in people infected with hepatitis B virus. In this study, we modified and further developed a recent model for early hepatitis D virus and hepatitis B virus kinetics to better reproduce hepatitis D virus and hepatitis B virus kinetics measured in infected patients during anti-hepatitis D virus treatment. The analytical solutions were provided to highlight the new features of the modified model. The improved model offered significantly better prospects for modeling hepatitis D virus and hepatitis B virus interactions.
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- 2022
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12. Treatment of chronic hepatitis D with peginterferon lambda—the phase 2 LIMT-1 clinical trial
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Ohad Etzion, Saeed Hamid, Yoav Lurie, Edward J. Gane, David Yardeni, Sarah Duehren, Nimrah Bader, Anat Nevo-Shor, Saleh Muhammad Channa, Scott J. Cotler, Minaz Mawani, Om Parkash, Harel Dahari, Ingrid Choong, and Jeffrey S. Glenn
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Hepatology - Published
- 2023
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13. A Mathematical Model for Early HBV and -HDV Kinetics during Anti-HDV Treatment
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Rami Zakh, Alexander Churkin, William Bietsch, Menachem Lachiany, Scott J. Cotler, Alexander Ploss, Harel Dahari, and Danny Barash
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hepatitis delta virus ,HDV-HBV coinfection ,viral kinetic models ,Mathematics ,QA1-939 - Abstract
Hepatitis delta virus (HDV) is an infectious subviral agent that can only propagate in people infected with hepatitis B virus (HBV). HDV/HBV infection is considered to be the most severe form of chronic viral hepatitis. In this contribution, a mathematical model for the interplay between HDV and HBV under anti-HDV treatment is presented. Previous models were not designed to account for the observation that HBV rises when HDV declines with HDV-specific therapy. In the simple model presented here, HDV and HBV kinetics are coupled, giving rise to an improved viral kinetic model that simulates the early interplay of HDV and HBV during anti-HDV therapy.
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- 2021
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14. Correction: Modeling suggests that microliter volumes of contaminated blood caused an outbreak of hepatitis C during computerized tomography.
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Eyal Shteyer, Louis Shekhtman, Tal Zinger, Sheri Harari, Inna Gafanovich, Dana Wolf, Hefziba Ivgi, Rima Barsuk, Ilana Dery, Daniela Armoni, Mila Rivkin, Rahul Pipalia, Michal Cohen Eliav, Yizhak Skorochod, Gabriel S Breuer, Ran Tur-Kaspa, Yonit Weil Wiener, Adi Stern, Scott J Cotler, Harel Dahari, and Yoav Lurie
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Medicine ,Science - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0210173.].
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- 2019
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15. Modeling suggests that microliter volumes of contaminated blood caused an outbreak of hepatitis C during computerized tomography.
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Eyal Shteyer, Louis Shekhtman, Tal Zinger, Sheri Harari, Inna Gafanovich, Dana Wolf, Hefziba Ivgi, Rima Barsuk, Ilana Dery, Daniela Armoni, Mila Rivkin, Rahul Pipalia, Michal Cohen Eliav, Yizhak Skorochod, Gabriel S Breuer, Ran Tur-Kaspa, Yonit Weil Wiener, Adi Stern, Scott J Cotler, Harel Dahari, and Yoav Lurie
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Medicine ,Science - Abstract
Background & aimsAcute hepatitis C (AHC) is not frequently identified because patients are usually asymptomatic, although may be recognized after iatrogenic exposures such as needle stick injuries, medical injection, and acupuncture. We describe an outbreak of AHC among 12 patients who received IV saline flush from a single multi-dose vial after intravenous contrast administration for a computerized tomography (CT) scan. The last patient to receive IV contrast with saline flush from a multi-dose vial at the clinic on the previous day was known to have chronic HCV genotype 1b (termed potential source, PS). Here we sought to confirm (via genetic analysis) the source of infection and to predict the minimal contaminating level of IV saline flush needed to transmit infectious virus to all patients.MethodsIn order to confirm the source of infection, we sequenced the HCV E1E2 region in 7 CT patients, in PS, and in 2 control samples from unrelated patients also infected with HCV genotype 1b. A transmission probabilistic model was developed to predict the contamination volume of blood that would have been sufficient to transmit infectious virus to all patients.ResultsViral sequencing showed close clustering of the cases with the PS. The transmission probabilistic model predicted that contamination of the multi-dose saline vial with 0.6-8.7 microliters of blood would have been sufficient to transmit infectious virus to all patients.ConclusionAnalysis of this unique cohort provides a new understanding of HCV transmission with respect to contaminating volumes and viral titers.
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- 2019
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16. End of treatment RNA-positive/sustained viral response in an individual with acute hepatitis C virus infection treated with direct-acting antivirals
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Eyal Shteyer, Harel Dahari, Ina Gafanovich, Ilana Dery, Dana Wolf, Scott J Cotler, and Yoav Lurie
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Published
- 2017
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17. Vitamin D Levels are Associated with Liver Disease Severity in Patients with Cirrhosis
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Megan A. Rech, Natasha Von Roenn, Ramon Durazo-Arvizu, Scott J Cotler, and Holly Kramer
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vitamin D ,liver ,cirrhosis ,liver disease ,serum calcium ,MELD ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Vitamin D deficiency is common in advanced liver disease but its clinical significance remains controversial. The aim of this study was to examine the correlation of 25-hydryoxyvitamin D levels with liver disease severity and calcium levels in adults with cirrhosis. This cross-sectional study included 180 adults with cirrhosis enrolled in a clinical cohort study at a single university hospital. The mean age was 58.8 (±9.2) years, and cirrhosis was attributed to alcohol use in 27.2%, hepatitis C in 35.0%, non-alcoholic steatohepatitis in 27.2%, and both alcohol and hepatitis C in 10.6%. The median model for end-stage liver disease-sodium (MELD-Na) score was 12.0 (interquartile range 9.0–16.0), and mean serum albumin levels were 3.4 (±0.7) gm/dl. Median serum 25-hydroxyvitamin D levels were 28.0 (interquartile range 20–38) ng/mL, with 16 patients (8.9%) having levels
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- 2017
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18. Plasma Hepatitis E Virus Kinetics in Solid Organ Transplant Patients Receiving Ribavirin
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Sebastien Lhomme, Swati DebRoy, Nassim Kamar, Florence Abravanel, David Metsu, Olivier Marion, Chloé Dimeglio, Scott J. Cotler, Jacques Izopet, and Harel Dahari
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hepatitis E virus ,viral kinetics ,ribavirin ,chronic infection ,Microbiology ,QR1-502 - Abstract
Hepatitis E virus (HEV) infection causes chronic hepatitis in solid organ transplant (SOT) recipients. Antiviral therapy consists of three months of ribavirin, although response rates are not optimal. We characterized plasma HEV kinetic patterns in 41 SOT patients during ribavirin therapy. After a median pharmacological delay of three (range: 0−21) days, plasma HEV declined from a median baseline level of 6.12 (3.53−7.45) log copies/mL in four viral kinetic patterns: (i) monophasic (n = 18), (ii) biphasic (n = 13), (iii) triphasic (n = 8), and (iv) flat-partial response (n = 2). The mean plasma HEV half-life was estimated to be 2.0 ± 0.96 days. Twenty-five patients (61%) had a sustained virological response (SVR) 24 weeks after completion of therapy. Viral kinetic patterns (i)−(iii) were not associated with baseline characteristics or outcome of therapy. A flat-partial response was associated with treatment failure. All patients with a log concentration decrease of plasma HEV at day seven of >15% from baseline achieved SVR. In conclusion, viral kinetic modeling of plasma HEV under ribavirin therapy showed, for the first time, four distinct kinetic profiles, a median pharmacologic delay of three days, and an estimated HEV half-life of two days. Viral kinetic patterns were not associated with response to therapy, with the exception of a flat-partial response.
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- 2019
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19. Imaging surveillance and multidisciplinary review improves curative therapy access and survival in HCC patients
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Ron C. Gaba, Eric R. Kallwitz, Ahmad Parvinian, James T. Bui, Natasha M. Von Roenn, Jamie L. Berkes, and Scott J. Cotler
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Liver ,Cancer ,Outcome ,Transplantation ,Specialties of internal medicine ,RC581-951 - Abstract
Introduction. Imaging surveillance and multidisciplinary conference (MDC) review can potentially improve survival in patients with hepatocellular carcinoma (HCC) by increasing access to liver transplantation. Geographic disparities in donor organ availability may reduce this benefit. This study evaluated the impact of HCC surveillance on use of curative therapies and survival in a region with long transplant waiting times.Material and methods. 167 HCC patients were retrospectively studied. Subjects had an established HCC diagnosis or were diagnosed during hepatology follow-up. Collected data included patient demographics, HCC surveillance and MDC review status, portal hypertension complications, laboratory and radiologic parameters, tumor size, therapeutic interventions, tumor progression, and mortality. The primary outcome measures were use of curative treatments and survival. A Cox-regression model was constructed utilizing factors associated with survival in univariate analysis.Results. 58% of subjects underwent surveillance and MDC review of HCC. These patients were more likely to have received treatment with ablation or resection (16 vs. 3%, P = 0.006) and transplantation (23 vs. 4%, P = 0.001), and were less likely to develop tumor progression (45 vs. 68%, P = 0.005) or metastases (0 vs. 19%, P < 0.001). In multivariate analysis, surveillance and MDC review (P = 0.034, HR 0.520, 95% CI 0.284–0.952), tumor meeting Milan criteria (P < 0.001, HR 0.329, 95% CI 0.178–0.607), curative therapy application (P = 0.048, HR 0.130, 95% CI 0.017–0.979), and transplantation (P = 0.004, HR 0.236, 95% CI 0.088–0.632) were associated with survival.Conclusion. In conclusion, imaging surveillance and MDC review is associated with detection of early stage HCC, increased access to curative therapies and transplantation, and prolonged survival.
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- 2013
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20. HCV kinetic and modeling analyses project shorter durations to cure under combined therapy with daclatasvir and asunaprevir in chronic HCV-infected patients.
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Laetitia Canini, Michio Imamura, Yoshiiku Kawakami, Susan L Uprichard, Scott J Cotler, Harel Dahari, and Kazuaki Chayama
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Medicine ,Science - Abstract
High cure rates are achieved in HCV genotype-1b patients treated with daclatasvir and asunaprevir, DCV/ASV. Here we analyzed early HCV kinetics in genotype-1b infected Japanese subjects treated with DCV/ASV and retrospectively projected, using mathematical modeling, whether shorter treatment durations might be effective.HCV RNA levels were measured frequently during DCV/ASV therapy in 95 consecutively treated patients at a single center in Japan. Mathematical modeling was used to predict the time to cure, i.e,
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- 2017
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21. HCV kinetic and modeling analyses indicate similar time to cure among sofosbuvir combination regimens with daclatasvir, simeprevir or ledipasvir
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Harel Dahari, Laetitia Canini, Frederik Graw, Susan L. Uprichard, EvaldoS A. Araujo, Guillaume Penaranda, Emilie Coquet, Aurélie Riso, Christophe Renou, Marc Bourlière, Scott J. Cotler, and Philippe Halfon
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Microbiology ,QR1-502 ,Public aspects of medicine ,RA1-1270 - Published
- 2016
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22. Objectively measured sedentary time, physical activity and liver enzyme elevations in US Hispanics/Latinos
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Marc D. Gellman, Robert C. Kaplan, Scott J. Cotler, Simin Hua, Guo Chong Chen, Gregory A. Talavera, Mark H. Kuniholm, Frank B. Hu, Carmen R. Isasi, Xuehong Zhang, Jun Li, Jianwen Cai, Qibin Qi, Sheila F. Castañeda, Zhilei Shan, and Garrett Strizich
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Physical fitness ,Physical activity ,Article ,03 medical and health sciences ,0302 clinical medicine ,Insulin resistance ,Risk Factors ,medicine ,Humans ,Aspartate Aminotransferases ,Exercise ,Sedentary lifestyle ,Sedentary time ,Hepatology ,business.industry ,Hispanic or Latino ,medicine.disease ,Confidence interval ,Liver ,Quartile ,030220 oncology & carcinogenesis ,Homeostatic model assessment ,030211 gastroenterology & hepatology ,Sedentary Behavior ,business ,Demography - Abstract
Background & aims Sedentariness and physical inactiveness are associated with deleterious health outcomes, but their associations with liver enzyme elevations remain uncertain. Methods In 10 385 US Hispanics/Latinos from the Hispanic Community Health Study/Study of Latinos, we examined associations of sedentary time and moderate-to-vigorous physical activity (MVPA) measured by accelerometers with liver enzyme elevations. Elevated alanine aminotransferase (ALT), aspartate aminotransferase and γ-glutamyltransferase (GGT) were defined as the highest gender-specific deciles. Prevalence ratios (PRs) and 95% confidence intervals (CIs) were calculated using weighted Poisson regressions. Results After adjusting for demographical/socioeconomic factors and MVPA, increasing quartiles of sedentary time were associated with a higher prevalence of elevated ALT (PRs [95% CI] = 1.0, 1.17 [0.92-1.47], 1.21 [0.96, 1.53] and 1.51 [1.13-2.02]; P-trend = .007) and elevated GGT (PRs [95% CI] = 1.0, 1.06 [0.82-1.36], 1.35 [1.06-1.73] and 1.66 [1.27-2.16]; P-trend = .0001). These associations were attenuated but remained significant after further adjustment for cardiometabolic traits including body-mass index, waist-hip-ratio, lipids and homeostatic model assessment of insulin resistance. In contrast, increasing quartiles of MVPA were associated with a lower prevalence of elevated ALT (PRs [95% CI] =1.0, 0.97 [0.77-1.23], 0.84 [0.66-1.06] and 0.72 [0.54-0.96]; P-trend = .01) after adjusting for demographical/socioeconomic factors and sedentary time, but this association became non-significant after further adjustment for cardiometabolic traits. Notably, the association of sedentary time with GGT elevation was significant both in individuals meeting the US Physical Activity Guidelines for Americans (MVPA ≥150 minutes/week) and in those who did not (both P-trend ≤ .003). Conclusions Our findings suggest that objectively measured sedentary time is independently associated with elevated ALT and GGT in US Hispanics/Latinos.
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- 2020
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23. Modeling-Based Response-Guided Glecaprevir-Pibrentasvir Therapy for Chronic Hepatitis C to Identify Patients for Ultrashort Treatment Duration
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Harel Dahari, Michio Imamura, Evan Gorstein, Susan L. Uprichard, Kazuaki Chayama, Swikriti Dasgupta, Masataka Tsuge, Takashi Nakahara, Scott J. Cotler, Alexander Churkin, David Yardeni, Danny Barash, and Ohad Etzion
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Cyclopropanes ,Male ,0301 basic medicine ,Pyrrolidines ,Time Factors ,Sustained Virologic Response ,Sofosbuvir ,Treatment duration ,medicine.disease_cause ,Gastroenterology ,chemistry.chemical_compound ,0302 clinical medicine ,Immunology and Allergy ,Aged, 80 and over ,Sulfonamides ,Middle Aged ,Pibrentasvir ,Drug Combinations ,Infectious Diseases ,RNA, Viral ,Drug Therapy, Combination ,Female ,030211 gastroenterology & hepatology ,medicine.drug ,Ledipasvir ,medicine.medical_specialty ,Hepatitis C virus ,Antiviral Agents ,Sofosbuvir/velpatasvir ,Drug Administration Schedule ,Major Articles and Brief Reports ,03 medical and health sciences ,Quinoxalines ,Internal medicine ,medicine ,Humans ,Elbasvir, Grazoprevir ,Aged ,Retrospective Studies ,Fluorenes ,Duration of Therapy ,Glecaprevir ,Hepatitis C, Chronic ,Models, Theoretical ,Amides ,Kinetics ,030104 developmental biology ,chemistry ,Benzimidazoles ,Carbamates - Abstract
We recently showed in a proof-of-concept study that real-time modeling-based response-guided therapy can shorten hepatitis C virus treatment duration with sofosbuvir-velpatasvir, elbasvir-grazoprevir, and sofosbuvir-ledipasvir without compromising efficacy, confirming our retrospective modeling reports in >200 patients. However, retrospective modeling of pibrentasvir-glecaprevir (P/G) treatment has yet to be evaluated. In the current study, modeling hepatitis C virus kinetics in 44 cirrhotic and noncirrhotic patients predicts that P/G treatment might have been reduced to 4, 6, and 7 weeks in 16%, 34%, and 14% of patients, respectively. These results support the further evaluation of a modeling-based response-guided therapy approach using P/G.
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- 2020
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24. Modelling hepatitis D virus RNA and HBsAg dynamics during nucleic acid polymer monotherapy suggest rapid turnover of HBsAg
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Adalbert Krawczyk, Louis M. Shekhtman, Harel Dahari, Valentin Cebotarescu, Pavlina Jimbei, Susan L. Uprichard, Leeor Hershkovich, Michel Bazinet, Ulf Dittmer, Lilia Cojuhari, Scott J. Cotler, Andrew Vaillant, and V. Pantea
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Adult ,Male ,0301 basic medicine ,HBsAg ,viruses ,Medizin ,lcsh:Medicine ,Hepatitis b surface antigen ,Antiviral Agents ,Models, Biological ,Article ,03 medical and health sciences ,0302 clinical medicine ,Infected cell ,Humans ,Viral hepatitis ,lcsh:Science ,Hepatitis B Surface Antigens ,Multidisciplinary ,Host Microbial Interactions ,Chemistry ,lcsh:R ,RNA ,virus diseases ,biochemical phenomena, metabolism, and nutrition ,Virology ,Cell loss ,digestive system diseases ,Kinetics ,030104 developmental biology ,Hepatitis D virus RNA ,Nucleic acid ,RNA, Viral ,Infectious diseases ,Female ,030211 gastroenterology & hepatology ,lcsh:Q ,Hepatitis D virus ,Hepatitis Delta Virus - Abstract
Hepatitis D virus (HDV) requires hepatitis B surface antigen (HBsAg) for its assembly and release. Current HBV treatments are only marginally effective against HDV because they fail to inhibit HBsAg production/secretion. However, monotherapy with the nucleic acid polymer REP 2139-Ca is accompanied by rapid declines in both HBsAg and HDV RNA. We used mathematical modeling to estimate HDV-HBsAg-host parameters and to elucidate the mode of action and efficacy of REP 2139-Ca against HDV in 12 treatment-naive HBV/HDV co-infected patients. The model accurately reproduced the observed decline of HBsAg and HDV, which was simultaneous. Median serum HBsAg half-life (t1/2) was estimated as 1.3 [0.9–1.8] days corresponding to a pretreatment production and clearance of ~108 [107.7–108.3] IU/day. The HDV-infected cell loss was estimated to be 0.052 [0.035–0.074] days−1 corresponding to an infected cell t1/2 = 13.3 days. The efficacy of blocking HBsAg and HDV production were 98.2 [94.5–99.9]% and 99.7 [96.0–99.8]%, respectively. In conclusion, both HBsAg production and HDV replication are effectively inhibited by REP 2139-Ca. Modeling HBsAg kinetics during REP 2139-Ca monotherapy indicates a short HBsAg half-life (1.3 days) suggesting a rapid turnover of HBsAg in HBV/HDV co-infection.
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- 2020
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25. Association of HSD17B13 rs72613567:TA with non‐alcoholic fatty liver disease in Hispanics/Latinos
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Eric R. Kallwitz, Scott J. Cotler, Donglin Zeng, Mark H. Kuniholm, Martha L. Daviglus, Carmen R. Isasi, and Bamidele O. Tayo
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Liver Cirrhosis ,medicine.medical_specialty ,17-Hydroxysteroid Dehydrogenases ,Single-nucleotide polymorphism ,Disease ,Polymorphism, Single Nucleotide ,digestive system ,03 medical and health sciences ,0302 clinical medicine ,Non-alcoholic Fatty Liver Disease ,Internal medicine ,Genotype ,Humans ,Medicine ,Allele ,Transaminases ,Hepatology ,business.industry ,Surrogate endpoint ,Fatty liver ,nutritional and metabolic diseases ,Non alcoholic ,Hispanic or Latino ,medicine.disease ,digestive system diseases ,030220 oncology & carcinogenesis ,Cohort ,030211 gastroenterology & hepatology ,business - Abstract
INTRODUCTION Non-alcoholic fatty liver disease (NAFLD) disproportionately affects Hispanic/Latinos and rates of NAFLD vary among Hispanics from different background groups. Genetic variants and continental ancestry contribute to NAFLD disparities among Hispanics. We evaluated two newly identified NAFLD-associated single nucleotide polymorphisms of HSD17B13, rs72613567:TA and rs62305723:A in Hispanics/Latinos. METHODS Clinical data, genotypes of variants of interest and estimates of continental ancestry were extracted from the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) database, which includes a cohort of 16 415 US Hispanic/Latinos. Surrogate endpoints for NAFLD were suspected NAFLD based on unexplained aminotransferase elevation, continuous ALT levels and FIB-4 scores to estimate hepatic fibrosis. RESULTS In all, 9342 participants were included for analysis. The rs72613567:TA allele was found in 15.3% and the rs62305723:A allele was identified in 4.5% of HCHS/SOL participants. rs72613567:TA was less frequent in persons with vs without suspected NAFLD (12.4% vs 15.7%, P
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- 2020
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26. Modeling-Based Response-Guided DAA Therapy for Chronic Hepatitis C to Identify Individuals for Shortening Treatment Duration
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Ashish Goyal, Alex Churkin, Danny Barash, Scott J Cotler, Amir Shlomai, Ohad Etzion, and Harel Dahari
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Infectious Diseases ,Oncology - Abstract
Shortening duration of direct-acting antiviral therapy for chronic hepatitis C could provide cost savings, reduce medication exposure, and foster adherence and treatment completion in special populations. The current analysis indicates that measuring hepatitis C virus at baseline and on days 7 and 14 of therapy can identify patients for shortening therapy duration.
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- 2022
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27. Integrin subunit beta 8 contributes to lenvatinib resistance in HCC
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Wei Hou, Bryan Bridgeman, Greg Malnassy, Xianzhong Ding, Scott J. Cotler, Asha Dhanarajan, and Wei Qiu
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Carcinoma, Hepatocellular ,Integrin beta Chains ,Hepatology ,Drug Resistance, Neoplasm ,Cell Line, Tumor ,Phenylurea Compounds ,Liver Neoplasms ,Quinolines ,Humans ,Proto-Oncogene Proteins c-akt - Abstract
Lenvatinib is a multikinase inhibitor approved as a first-line therapy for advanced hepatocellular carcinoma (HCC). However, the development of drug resistance is common, and the underlying mechanisms governing this resistance are largely unknown. In this study, we established two lenvatinib-resistant (LR) HCC cell lines and identified integrin subunit beta 8 (ITGB8) as a critical contributor to lenvatinib resistance in HCC. The elevated expression of ITGB8 was observed in LR HCC cells. Furthermore, silencing of ITGB8 reversed lenvatinib resistance in vitro and in vivo, whereas ectopic expression of ITGB8 in lenvatinib-sensitive parental HCC cells exhibited increased resistance to lenvatinib. Mechanistically, ITGB8 regulated lenvatinib resistance through an HSP90-mediated stabilization of AKT and enhanced AKT signaling. In support of this model, either an AKT inhibitor MK-2206 or an HSP90 inhibitor 17-AAG resensitized LR HCC cells to lenvatinib treatment. Conclusion: Collectively, our results establish a crucial role of ITGB8 in lenvatinib resistance, and suggest that targeting the ITGB8/HSP90/AKT axis is a promising therapeutic strategy in patients with HCC exhibiting lenvatinib resistance.
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- 2022
28. Hepatitis B Stigma and Knowledge among Vietnamese in Ho Chi Minh City and Chicago
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Lan Dam, Anita Cheng, Phuong Tran, Shirley S. Wong, Ronald Hershow, Sheldon Cotler, and Scott J. Cotler
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Stigma regarding viral hepatitis and liver disease has psychological and social consequences including causing negative self-image, disrupting relationships, and providing a barrier to prevention, testing, and treatment. The aim of this study was to characterize and compare HBV knowledge and stigma in Vietnamese in Ho Chi Minh City and Chicago and to begin to evaluate the cultural context of HBV stigma. Methods. A written survey including knowledge questions and a validated HBV stigma questionnaire was distributed to Vietnamese in Ho Chi Minh City and Chicago. 842 surveys from Ho Chi Minh City and 170 from Chicago were analyzed. Results. Vietnamese living in Chicago had better understanding of HBV transmission and that HBV can cause chronic infection and liver cancer. Vietnamese in Chicago had higher stigma scores on a broad range of items including guilt and shame about HBV and were more likely to feel that persons with HBV can bring harm to others and should be isolated. Conclusions. Vietnamese in Ho Chi Minh City and Chicago have knowledge deficits about HBV, particularly regarding modes of transmission. Persons in Ho Chi Minh City expressed lower levels of HBV stigma than Vietnamese living in Chicago, likely reflecting changing cultural attitudes in Vietnam. Culturally appropriate educational initiatives are needed to address the problem of HBV stigma.
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- 2016
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29. Machine learning for mathematical models of HCV kinetics during antiviral therapy
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Alexander Churkin, Stephanie Kriss, Asher Uziel, Ashish Goyal, Rami Zakh, Scott J. Cotler, Ohad Etzion, Amir Shlomai, Horacio G. Rotstein, Harel Dahari, and Danny Barash
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Statistics and Probability ,General Immunology and Microbiology ,Applied Mathematics ,General Medicine ,Hepacivirus ,Hepatitis C, Chronic ,Models, Theoretical ,Antiviral Agents ,Hepatitis C ,General Biochemistry, Genetics and Molecular Biology ,Article ,Machine Learning ,Kinetics ,Treatment Outcome ,Modeling and Simulation ,Humans ,Drug Therapy, Combination ,General Agricultural and Biological Sciences ,Retrospective Studies - Abstract
Mathematical models for hepatitis C virus (HCV) dynamics have provided a means for evaluating the antiviral effectiveness of therapy and estimating treatment outcomes such as the time to cure. Recently, a mathematical modeling approach was used in the first proof-of-concept clinical trial assessing in real-time the utility of response-guided therapy with direct-acting antivirals (DAAs) in chronic HCV-infected patients. Several retrospective studies have shown that mathematical modeling of viral kinetics predicts time to cure of less than 12 weeks in the majority of individuals treated with sofosbuvir-based as well as other DAA regimens. A database of these studies was built, and machine learning methods were evaluated for their ability to estimate the time to cure for each patient to facilitate real-time modeling studies. Data from these studies exploring mathematical modeling of HCV kinetics under DAAs in 266 chronic HCV-infected patients were gathered. Different learning methods were applied and trained on part of the dataset ('train' set), to predict time to cure on the untrained part ('test' set). Our results show that this machine learning approach provides a means for establishing an accurate time to cure prediction that will support the implementation of individualized treatment.
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- 2021
30. Modeling hepatitis C virus kinetics during liver transplantation reveals the role of the liver in virus clearance
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Gonzalo Crespo, E Fabian Cardozo-Ojeda, Louis M. Shekhtman, Scott J. Cotler, Harel Dahari, Xavier Forns, Natasha Sansone, Susan L. Uprichard, Alan S. Perelson, Gitanjali Subramanya, Miquel Navasa, Tje Lin Chung, and Sofía Pérez-del-Pulgar
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Adult ,Male ,hepatitis C virus ,QH301-705.5 ,Science ,medicine.medical_treatment ,Hepatitis C virus ,viral kinetics ,Hepacivirus ,Liver transplantation ,medicine.disease_cause ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Virus ,Humans ,Medicine ,Biology (General) ,Aged ,Microbiology and Infectious Disease ,cell culture ,General Immunology and Microbiology ,business.industry ,General Neuroscience ,mathematical modeling ,Hcv clearance ,virus diseases ,General Medicine ,Middle Aged ,Viral Load ,Hepatitis C ,Virology ,Viral kinetics ,digestive system diseases ,Biomechanical Phenomena ,Liver Transplantation ,Kinetics ,liver transplant ,Cell culture ,Female ,hepatocytes ,Transplant patient ,business ,Research Article ,Human - Abstract
While the liver, specifically hepatocytes, are widely accepted as the main source of hepatitis C virus (HCV) production, the role of the liver/hepatocytes in clearance of circulating HCV remains unknown. Frequent HCV kinetic data were recorded and mathematically modeled from five liver transplant patients throughout the anhepatic (absence of liver) phase and for 4 hr post-reperfusion. During the anhepatic phase, HCV remained at pre-anhepatic levels (n = 3) or declined (n = 2) with t1/2~1 hr. Immediately post-reperfusion, virus declined in a biphasic manner in four patients consisting of a rapid decline (t1/2 = 5 min) followed by a slower decline (t1/2 = 67 min). Consistent with the majority of patients in the anhepatic phase, when we monitored HCV clearance at 37°C from culture medium in the absence/presence of chronically infected hepatoma cells that were inhibited from secreting HCV, the HCV t1/2 in cell culture was longer in the absence of chronically HCV-infected cells. The results suggest that the liver plays a major role in the clearance of circulating HCV and that hepatocytes may be involved.
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- 2021
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31. American Ancestry Is a Risk Factor for Suspected Nonalcoholic Fatty Liver Disease in Hispanic/Latino Adults
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Mark H. Kuniholm, Martha L. Daviglus, Scott J. Cotler, Eric R. Kallwitz, Jianwen Cai, Richard S. Cooper, and Bamidele O. Tayo
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Adult ,Male ,medicine.medical_specialty ,Population ,Single-nucleotide polymorphism ,Genome-wide association study ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,Non-alcoholic Fatty Liver Disease ,Risk Factors ,Nonalcoholic fatty liver disease ,Epidemiology ,medicine ,Humans ,Genetic Predisposition to Disease ,Risk factor ,education ,Transaminases ,education.field_of_study ,Hepatology ,business.industry ,Gastroenterology ,Membrane Proteins ,DNA ,Hispanic or Latino ,Lipase ,Odds ratio ,Middle Aged ,medicine.disease ,030220 oncology & carcinogenesis ,Female ,030211 gastroenterology & hepatology ,business ,Biomarkers ,TM6SF2 ,Demography - Abstract
Nonalcoholic fatty liver disease (NAFLD) disproportionally affects Hispanic/Latino populations. However, the magnitude varies among Hispanic/Latino ethnic groups. We investigated the mechanisms of these disparities.We examined associations of NAFLD-associated genetic variants and continental ancestry with suspected NAFLD, levels of alanine aminotransferase (ALT), and liver fibrosis using data from the Hispanic Community Health Study/Study of Latinos-a population-based study of Hispanic/Latino adults in the United States. We evaluated data from 16,415 Hispanic/Latino adults in 4 cities from 2008 through 2011. Subjects suspected of having NAFLD or liver fibrosis were identified based on unexplained increases in levels of aminotransferases and FIB-4 score, respectively.Among the 9342 participants with available genetic and aminotransferase data, the PNPLA3 G allele (odds ratio [OR], 1.53; 95% CI, 1.41-1.66), TM6SF2 T allele (OR, 1.41; 95% CI, 1.20-1.67), and PPP1R3B G allele (OR, 1.16; 95% CI, 1.06-1.28) were associated with suspected NAFLD. PNPLA3 G was also associated with increased levels of ALT, except in participants with Dominican and South American backgrounds, and with liver fibrosis. The frequency of PNPLA3 G was high (41%) and TM6SF2 T (5%) was low in Hispanic/Latinos. PNPLA3 G frequency differed among Hispanic background groups with the highest proportion in Mexicans (52%) and the lowest proportion in Dominicans (23%). After adjustment for demographic, clinical, and behavioral factors, as well as PNPLA3 G, TM6SF2 T, and PPP1R3B G, American ancestry had a positive association with level of ALT (r = 6.61%; P.001), whereas African (r = -3.84%; P.001) and European (r = -4.31%; P.001) ancestry were inversely associated with level of ALT.American ancestry and PNPLA3 G are independent predictors of ALT levels in US Hispanic/Latinos and may in part explain NAFLD disparities in US Hispanic/Latinos.
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- 2019
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32. Focal Adhesion Kinase and β‐Catenin Cooperate to Induce Hepatocellular Carcinoma
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Peter Breslin, Hao Wang, Gina Kuffel, Cara Joyce, Na Shang, Aldeb Perera, Thomas Bank, Scott J. Cotler, Asha Dhanarajan, Michael J. Zilliox, Wei Qiu, and Xianzhong Ding
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Male ,0301 basic medicine ,Carcinoma, Hepatocellular ,medicine.disease_cause ,Article ,Focal adhesion ,Mice ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Humans ,Kinase activity ,beta Catenin ,Regulation of gene expression ,Hepatology ,Chemistry ,Liver Neoplasms ,Gene Expression Regulation, Neoplastic ,Mice, Inbred C57BL ,Androgen receptor ,030104 developmental biology ,Tyrosine kinase 2 ,Focal Adhesion Kinase 1 ,Catenin ,Mutation ,Cancer research ,Female ,030211 gastroenterology & hepatology ,biological phenomena, cell phenomena, and immunity ,Signal transduction ,Carcinogenesis - Abstract
There is an urgent need to understand the molecular signaling pathways that drive or mediate the development of hepatocellular carcinoma (HCC). The focal adhesion kinase (FAK) gene, PTK2, is amplified in 16.4% of The Cancer Genome Atlas HCC specimens, and its amplification leads to increased FAK messenger RNA expression. It is not known whether the overexpression of FAK alone is sufficient to induce HCC or whether it must cooperate in some ways with other oncogenes. In this study, we found that 34.8% of human HCC samples with FAK amplification also show β-catenin mutations, suggesting a co-occurrence of FAK overexpression and β-catenin mutations in HCC. We overexpressed FAK alone, constitutively active forms of β-catenin (CAT) alone, or a combination of FAK and CAT in the livers of C57/BL6 mice. We found that overexpression of both FAK and CAT, but neither FAK nor CAT alone, in mouse livers was sufficient to lead to tumorigenesis. We further demonstrated that FAK’s kinase activity is required for FAK/CAT-induced tumorigenesis. Furthermore, we performed RNA sequencing analysis to identify the genes/signaling pathways regulated by FAK, CAT, or FAK/CAT. We found that FAK overexpression dramatically enhances binding of β-catenin to the promoter of androgen receptor (AR), which leads to increased expression of AR in mouse livers. Moreover, ASC-J9, an AR degradation enhancer, suppressed FAK/β-catenin-induced HCC formation. Conclusion: FAK overexpression and β-catenin mutations often co-occur in human HCC tissues. Co-overexpression of FAK and CAT leads to HCC formation in mice through an increased expression of AR. This mouse model will be useful for further studies of the molecular mechanisms in the pathogenesis of HCC and could lead to the identification of new therapeutic targets.
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- 2019
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33. Case Series of 10 Patients with Cirrhosis Undergoing Emergent Repair of Ruptured Umbilical Hernias: Natural History and Predictors of Outcomes
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Eric R. Kallwitz, Silvio W. de Melo, Anai N. Kothari, Amy D. Lu, Andre Fialho, Christopher M. Moore, Diego di Sabato, Scott J. Cotler, Miguel Malespin, and Tamara Benyashvili
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Liver Cirrhosis ,Male ,medicine.medical_specialty ,Time Factors ,Cirrhosis ,040301 veterinary sciences ,medicine.medical_treatment ,Liver transplantation ,0403 veterinary science ,Liver disease ,Risk Factors ,Ascites ,medicine ,Humans ,Hernia ,Herniorrhaphy ,Aged ,Retrospective Studies ,Aged, 80 and over ,Transplantation ,Rupture, Spontaneous ,business.industry ,0402 animal and dairy science ,Retrospective cohort study ,04 agricultural and veterinary sciences ,Middle Aged ,medicine.disease ,040201 dairy & animal science ,Liver Transplantation ,Surgery ,Umbilical hernia ,Treatment Outcome ,Female ,Emergencies ,medicine.symptom ,business ,Complication ,Hernia, Umbilical - Abstract
Objectives Ascites represents an important event in the natural history of cirrhosis, portending increased 1-year mortality. Umbilical herniation with rupture is an uncommon complication of large-volume ascites that is associated with significant morbidity and mortality. The aim of this study was to describe predictors of outcomes in patients undergoing emergent repair for spontaneous umbilical hernia rupture. Materials and methods We report a case series of 10 patients with decompensated cirrhosis (mean age 66 ± 9 years, mean Model for End-Stage Liver Disease score of 21 ± 7) who presented with a ruptured umbilical hernia and had emergent repair. Results Thirty percent (3/10) of patients died or required liver transplant. Factors associated with death or transplant included the development of bacterial peritonitis (P = .03) and the presurgical 30-day Mayo Clinic Postoperative Mortality Risk in Patient with Cirrhosis Score (P = .03). Conclusions Emergent repair after umbilical hernia rupture in patients with decompensated cirrhosis carries a poor prognosis with 30% of patients developing poor postsurgical outcomes.
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- 2019
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34. Barriers to treatment of chronic hepatitis C with direct acting antivirals in an urban clinic
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Ozdemir Kanar, Kelly Jackman, David R. Nelson, Scott J. Cotler, Carmen Smotherman, Silvio W. de Melo, Abbey Johnston, James S. Scolapio, Julie Ferm, Miguel Malespin, and Ciel Harris
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Male ,Health Knowledge, Attitudes, Practice ,medicine.medical_specialty ,Time Factors ,Sustained Virologic Response ,Substance-Related Disorders ,Academic practice ,Specialties of internal medicine ,DIRECT ACTING ANTIVIRALS ,Chronic hepatitis C ,Antiviral Agents ,Health Services Accessibility ,Direct acting antivirals ,Appointments and Schedules ,03 medical and health sciences ,0302 clinical medicine ,Chronic hepatitis ,Internal medicine ,Urban Health Services ,Humans ,Medicine ,030212 general & internal medicine ,Retrospective Studies ,Insurance, Health ,Hepatology ,business.industry ,Medical record ,Retrospective cohort study ,General Medicine ,Hepatitis C, Chronic ,Middle Aged ,medicine.disease ,Substance abuse ,Treatment Outcome ,Barriers to treatment ,RC581-951 ,Psychosocial factors ,Florida ,Patient Compliance ,Drug Therapy, Combination ,Female ,030211 gastroenterology & hepatology ,business ,Psychosocial ,Medicaid - Abstract
Introduction and aim Direct-acting antiviral (DAA) agents are highly effective for treatment of chronic hepatitis C virus (HCV) yet access to treatment remains a serious challenge. The aim of this study was to identify barriers to treatment initiation with DAA-containing regimens in an urban clinic setting. Materials and methods A retrospective cohort of all chronic HCV patients seen in an urban academic practice in Jacksonville, FL, USA from 1/2014 to 1/2017 was analyzed. Baseline characteristics were recorded and a review of medical records was performed to identify barriers to treatment initiation and overall success rates. Results Two-hundred and forty patients with chronic HCV were analyzed. Fifty-six percent of patients were African-American and 63% were insured through Medicaid/county programs or uninsured. Sixty-nine percent had barriers to initiating antiviral therapy categorized as psychosocial (n = 112), provider (n = 26), medical (n = 20), and insurance-related factors (n = 7). The most commonly encountered psychosocial barriers included failure to keep appointments (79/240, 33%), active substance abuse (18/240, 8%), and failure to obtain laboratory testing (11/240, 5%). Overall, only 27% of patients evaluated were initiated on DAA-containing regimens with 18% reaching SVR12 within the 36-month study period. Conclusion In conclusion, only 27% of patients who presented to an urban academic practice with chronic HCV received DAA-containing regimens over a 36-month period. Psychosocial issues were the major barriers to antiviral therapy. These findings illustrate the need for an integrated approach that addresses psychosocial factors as well as comorbidities and adherence to care in order to increase rates of HCV treatment in at risk patients.
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- 2019
35. A randomized, proof-of-concept clinical trial on repurposing chlorcyclizine for the treatment of chronic hepatitis C
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Scott J. Cotler, Christopher Koh, H. Martin Garraffo, Noel Southall, Theo Heller, T. Jake Liang, Susan L. Uprichard, Nathaniel Borochov, Ohad Etzion, Pallavi Surana, Ma Ai Thanda Han, Peter Walter, Preeti Dubey, and Harel Dahari
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Male ,0301 basic medicine ,medicine.medical_specialty ,Genotype ,medicine.medical_treatment ,030106 microbiology ,Viremia ,Antiviral Agents ,Proof of Concept Study ,Loading dose ,Gastroenterology ,Piperazines ,Article ,03 medical and health sciences ,Chlorcyclizine ,Pharmacokinetics ,Interquartile range ,Virology ,Internal medicine ,medicine ,Humans ,Adverse effect ,Pharmacology ,business.industry ,Drug Repositioning ,Hepatitis C, Chronic ,Middle Aged ,Models, Theoretical ,medicine.disease ,Clinical trial ,Kinetics ,030104 developmental biology ,Female ,Antihistamine ,business ,medicine.drug - Abstract
Background & aims Chlorcyclizine HCl (CCZ) is a piperazine-class antihistamine with anti-hepatitis C virus (HCV) activity in vitro and in vivo. In a first-in-humans study for HCV, we evaluated the antiviral effects and safety of CCZ±ribavirin (RBV), characterized pharmacokinetic (PK) and viral kinetic (VK) patterns, and provide insights into CCZs mode of action against HCV. Methods Chronic HCV patients were randomized to CCZ (75 mg twice daily) or CCZ+weight-based RBV (1000/1200 mg daily) for 28 days. Therapy started with a loading dose of CCZ 150 mg ± RBV. Serial assessments of safety, liver tests, PK and VK markers were obtained. Results 24 HCV patients were treated; 54% male, median age 56 years, median HCV RNA 6.30 log IU/ml, without baseline differences between groups. At the end of therapy, subjects treated with CCZ monotherapy did not show any significant or sustained reduction in viremia (p = 0.69), whereas 7/12 (58%) subjects treated with CCZ+RBV had a >3-fold decline in HCV RNA. Subjects who responded demonstrated monophasic (n = 2), biphasic (n = 2) and triphasic (n = 3) VK responses. Contrary to historical RBV monotherapy response, CCZ+RBV demonstrated a continued viral decline suggesting a possible synergistic effect of CCZ+RBV. Mathematical modeling predicts a median effectiveness of CCZ+RBV in blocking viral production (e) of 59% (Interquartile range, IQR: 50%) and blocking infection (η) of 78% (IQR: 23%). Adverse events (AEs) were mild-moderate without treatment discontinuations for AEs. Conclusions In this human pilot study, CCZ demonstrated some anti-HCV effects, mostly in combination with RBV. More potent CCZ derivatives with optimal PK features may be more suitable for future therapeutic development. ClinicalTrials.gov number: NCT02118012.
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- 2019
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36. Author response: Modeling hepatitis C virus kinetics during liver transplantation reveals the role of the liver in virus clearance
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Gonzalo Crespo, Susan L. Uprichard, E Fabian Cardozo-Ojeda, Scott J. Cotler, Miquel Navasa, Natasha Sansone, Alan S. Perelson, Louis M. Shekhtman, Xavier Forns, Tje Lin Chung, Harel Dahari, Sofía Pérez-del-Pulgar, and Gitanjali Subramanya
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business.industry ,Hepatitis C virus ,medicine.medical_treatment ,Kinetics ,medicine ,Liver transplantation ,medicine.disease_cause ,business ,Virology ,Virus - Published
- 2021
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37. Association of liver enzymes with incident diabetes in US Hispanic/Latino adults
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Qibin Qi, Simin Hua, Martha L. Daviglus, Jianwen Cai, Bharat Thyagarajan, Neil Schneiderman, Robert C. Kaplan, Jessica Williams-Nguyen, Gregory A. Talavera, Carmen R. Isasi, Jorge R. Kizer, Howard D. Strickler, and Scott J. Cotler
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,Endocrinology, Diabetes and Metabolism ,030209 endocrinology & metabolism ,Disease ,Risk Assessment ,digestive system ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Liver Function Tests ,Non-alcoholic Fatty Liver Disease ,Risk Factors ,Diabetes mellitus ,Internal medicine ,Odds Ratio ,Internal Medicine ,Humans ,Medicine ,Aspartate Aminotransferases ,Prospective Studies ,030212 general & internal medicine ,Prospective cohort study ,Aged ,business.industry ,Incidence ,Fatty liver ,Alanine Transaminase ,Hispanic or Latino ,gamma-Glutamyltransferase ,Middle Aged ,Hepatitis B ,medicine.disease ,Obesity ,United States ,digestive system diseases ,Diabetes Mellitus, Type 2 ,Liver ,Quartile ,Relative risk ,Female ,business ,Follow-Up Studies - Abstract
INTRODUCTION Non-alcoholic fatty liver disease (NAFLD) has been associated with increased risk of incident diabetes. But such evidence is lacking in the Hispanic/Latino population, which has high prevalence of obesity and NAFLD. METHODS We conducted a prospective cohort study of 6,928 adults of Hispanic/Latino background who had no diabetes, did not report excessive alcohol use, and no hepatitis B and C infection at baseline (2008-2011). We estimated risk ratios (RR) for incident diabetes, identified from visit 2 examination by glucose measurements or antidiabetic medication use, with baseline liver enzymes (alanine aminotransferase (ALT), aspartate aminotransferase (AST) and gamma-glutamyl transpeptidase (GGT)). RESULTS A total of 738 adults developed diabetes during 6 years of follow-up. After adjusting for participant characteristics at baseline, versus the lowest quartile, highest quartiles of ALT and GGT were associated with risks for incident diabetes (RR for ALT: 1.51 [95% CI 1.03-2.22], p-trend = 0.006; RR for GGT: 2.39 [1.60-3.55], p-trend = 0.001). Higher GGT levels predicted increased risk of incident diabetes even among those with ALT or AST below the median levels. The associations of ALT and GGT with incident diabetes were similar among most Hispanic background but were not seen among Dominicans (p for interaction
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- 2021
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38. Response guided therapy for reducing duration of direct acting antivirals in chronic hepatitis C infected patients: a Pilot study
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Michal Cohen-Naftaly, David Yardeni, Susan L. Uprichard, Amir Shlomai, Daniela Munteanu, Yaffa Ashur, Harel Dahari, Jayanah Murad, Naim Abu-Freha, Orna Mor, Marius Braun, Scott J. Cotler, Orly Sneh Arbib, Ayelet Keren-Naus, Victor Novack, Yonat Shemer-Avni, Ohad Etzion, Anat Nevo-Shor, and Assaf Issachar
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Adult ,Male ,medicine.medical_specialty ,Sofosbuvir ,Hepatitis C virus ,lcsh:Medicine ,Pilot Projects ,medicine.disease_cause ,Antiviral Agents ,Article ,Virus ,03 medical and health sciences ,0302 clinical medicine ,Chronic hepatitis ,Internal medicine ,Genotype ,medicine ,Clinical endpoint ,Humans ,Prospective Studies ,030212 general & internal medicine ,lcsh:Science ,Aged ,Multidisciplinary ,business.industry ,lcsh:R ,Hepatitis C ,Hepatitis C, Chronic ,Middle Aged ,Viral Load ,medicine.disease ,Clinical trial ,Treatment Outcome ,Feasibility Studies ,lcsh:Q ,Female ,030211 gastroenterology & hepatology ,business ,medicine.drug - Abstract
The advent of direct-acting antivirals (DAAs) has transformed the landscape of hepatitis C virus (HCV) management. We aimed to prospectively (real-time) evaluate the feasibility of using a response-guided therapy approach, based on mathematical modeling of early viral kinetics, to reduce the duration of DAAs therapy. Patients were treated with DAAs according to the physicians’ preference. HCV was measured at baseline and at day 2 and weeks 1, 2 and 4 after treatment initiation. The primary endpoint was the proportion of patients with sustained-virological response (SVR) at 12 and/or 24 weeks post-treatment. Twenty-nine patients (mean age 54 ± 16, 44% females, 73% with HCV genotype 1), were enrolled and all completed therapy. Treatment duration was shortened in 11 of the 29 patients (38%). SVR was achieved in 28 of the 29 patients (97%). Relapse occurred post treatment in a single case of a non-cirrhotic male with genotype 3, who was treated with sofosbuvir/velpatasvir for 6 weeks. Virus sequencing did not identify baseline or treatment emergent resistance associated substitutions. Real-time mathematical modeling of early HCV kinetics can be utilized for shortening DAAs duration in approximately 40% of patients without compromising treatment efficacy.Clinical trial registration: ClinicalTrials.gov Identifier: NCT03603327.
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- 2020
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39. Combined Use of Aspirin and Statin is Associated With a Decreased Incidence of Hepatocellular Carcinoma
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Scott J. Cotler, Benjamin Schmidt, Daniel Aldrich, Steven Scaglione, David Park, Chris Kasia, Asha Dhanarajan, Amy Wozniak, and Jasleen Singh
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medicine.medical_specialty ,Statin ,Carcinoma, Hepatocellular ,medicine.drug_class ,Esophageal and Gastric Varices ,Gastroenterology ,Risk Factors ,Internal medicine ,Medicine ,Humans ,Prospective Studies ,Prospective cohort study ,Retrospective Studies ,Aspirin ,business.industry ,Incidence (epidemiology) ,Incidence ,Hazard ratio ,Liver Neoplasms ,Retrospective cohort study ,medicine.disease ,digestive system diseases ,Confidence interval ,Hepatocellular carcinoma ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business ,Gastrointestinal Hemorrhage ,medicine.drug - Abstract
Background Hepatocellular carcinoma (HCC) is a leading cause of cancer and cancer-related mortality worldwide. Studies have suggested that aspirin (ASA) and statins may be associated with a decrease in incident HCC. Goals We aimed to evaluate the effect of ASA and statin use on the incidence of HCC in a prospective cohort of patients with liver cirrhosis and to identify if there was an increased risk of esophageal variceal hemorrhage (VH) in patients with ASA use. Study We conducted a retrospective study of 521 patients with data collected from July 1, 2012 to December 31, 2017. We used competing risk analysis to assess the association between risk factors and HCC; and the association between ASA and VH. Results ASA use alone was associated with a decreased incidence of HCC in the univariate and multivariate models; [hazard ratio (HR) confidence interval (CI): 0.348 (0.124-0.976); P=0.0448] and [HR (CI): 0.266 (0.094-0.755); P=0.0129, respectively]. The combination of ASA and statin use was associated with a decreased hazard of HCC [HR (CI): 0.15 (0.036-0.624); P=0.0090] and this remained statistically significant in the multivariable model [HR (CI): 0.113 (0.026-0.483); P=0.0033]. Among daily ASA users compared with non-users, there was not a significant increase in risk of VH. Conclusions Daily ASA use was associated with a decrease risk of incident HCC. The combination of daily ASA use and statin use decreased the risk of incident HCC suggesting there is beneficial interaction. Finally, no excess VH was observed in daily ASA users compared with non-users.
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- 2020
40. Modeling hepatitis C virus kinetics during liver transplantation highlights the role of the liver in virus clearance
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Tje Lin Chung, Susan L. Uprichard, Alan S. Perelson, Natasha Sansone, Xavier Forns, Scott J. Cotler, Miquel Navasa, Louis M. Shekhtman, Sofía Pérez-del-Pulgar, Gitanjali Subramanya, Gonzalo Crespo, and Harel Dahari
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business.industry ,Hepatitis C virus ,medicine.medical_treatment ,Liver transplantation ,medicine.disease_cause ,Virology ,digestive system diseases ,In vitro ,Virus ,In vivo ,Medicine ,business ,Clearance rate ,In vitro cell culture - Abstract
While the liver, specifically hepatocytes, are widely accepted as the main source for hepatitis C virus (HCV) production, the role of the liver/hepatocytes in the clearance of circulating HCV remains largely unknown. Here we evaluated the function of the liver/hepatocytes in clearing virus from the circulation by investigating viral clearance during liver transplantation and from culture medium in vitro. Frequent HCV kinetic data during liver transplantation were recorded from 5 individuals throughout the anhepatic (AH) phase and for 4 hours after reperfusion (RP), along with recordings of fluid balances. Using mathematical modeling, the serum viral clearance rate, c, was estimated. Analogously, we monitored the clearance rate of HCV at 37°C from culture medium in vitro in the absence and presence of chronically infected Huh7 human hepatoma cells. During the AH phase, in 3 transplant cases viral levels remained at pre-AH levels, while in the other 2 cases HCV declined (half-life, t1/2~1h). Immediately post-RP, virus declined in a biphasic manner in Cases 1-4 consisting of an extremely rapid (median t1/2=5min) decline followed by a slower decline (HCV t1/2=67min). In Case 5, HCV remained at the same level post-RP as at the end of AH. Declines in virus level were not explained by adjusting for dilution from IV fluid and blood products. Consistent with what was observed in the majority of patients in the anhepatic phase, the t1/2 of HCV in cell culture was much longer in the absence of chronically HCV-infected Huh7 cells. Therefore, kinetic and modeling results from both in vivo liver transplantation cases and in vitro cell culture studies suggest that the liver plays a major role in clearing HCV from the circulation.
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- 2020
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41. MULTI-OBJECTIVE MODEL EXPLORATION OF HEPATITIS C ELIMINATION IN AN AGENT-BASED MODEL OF PEOPLE WHO INJECT DRUGS
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Basmattee Boodram, Harel Dahari, Marian E. Major, Alexander Gutfraind, Jonathan Ozik, Eric Tatara, Scott J. Cotler, and Nicholson Collier
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0301 basic medicine ,Agent-based model ,medicine.medical_specialty ,Optimization algorithm ,business.industry ,Hepatitis C ,medicine.disease ,Hcv elimination ,World health ,Article ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Intervention (counseling) ,Multi objective model ,Medicine ,030211 gastroenterology & hepatology ,business ,Intensive care medicine ,Treatment costs - Abstract
Hepatitis C (HCV) is a leading cause of chronic liver disease and mortality worldwide and persons who inject drugs (PWID) are at the highest risk for acquiring and transmitting HCV infection. We developed an agent-based model (ABM) to identify and optimize direct-acting antiviral (DAA) therapy scale-up and treatment strategies for achieving the World Health Organization (WHO) goals of HCV elimination by the year 2030. While DAA is highly efficacious, it is also expensive, and therefore intervention strategies should balance the goals of elimination and the cost of the intervention. Here we present and compare two methods for finding PWID treatment enrollment strategies by conducting a standard model parameter sweep and compare the results to an evolutionary multi-objective optimization algorithm. The evolutionary approach provides a pareto-optimal set of solutions that minimizes treatment costs and incidence rates.
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- 2020
42. Finding the Right Balance for the Use of Donation After Circulatory Death Livers for Patients With Hepatocellular Carcinoma
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David D. Lee and Scott J. Cotler
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Transplantation ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,Tissue and Organ Procurement ,Hepatology ,business.industry ,medicine.medical_treatment ,Liver Neoplasms ,Liver transplantation ,medicine.disease ,Gastroenterology ,Circulatory death ,digestive system diseases ,Article ,Liver Transplantation ,Balance (accounting) ,Internal medicine ,Hepatocellular carcinoma ,Donation ,medicine ,Humans ,Surgery ,business - Abstract
Liver transplantation (LT) recipients with hepatocellular carcinoma (HCC) receive a higher proportion of livers from donation after circulatory death (DCD) donors compared with non-HCC etiologies. Nevertheless, data on outcomes in patients with HCC receiving DCD grafts are limited. We evaluated the influence of DCD livers on post-LT outcome among HCC patients. We identified 7563 patients in the United Network for Organ Sharing (UNOS) database who underwent LT with Model for End-Stage Liver Disease score exceptions from 2012 to 2016, including 567 (7.5%) who received a DCD donor organ and 6996 (92.5%) who received a donation after brain death (DBD) donor organ. Kaplan-Meier probabilities of post-LT HCC recurrence at 3 years were 7.6% for DCD and 6.4% for DBD recipients (P = 0.67) and post-LT survival at 3 years was 81.1% versus 85.5%, respectively (P = 0.008). On multivariate analysis, DCD donor (hazard ratio, 1.38; P = 0.005) was an independent predictor of post-LT mortality. However, a survival difference after LT was only observed in subgroups at higher risk for HCC recurrence including Risk Estimation of Tumor Recurrence After Transplant (RETREAT) score ≥4 (DCD 57.0% versus DBD 72.6%; P = 0.02), alpha-fetoprotein (AFP) ≥100 (60.1% versus 76.9%; P = 0.049), and multiple viable tumors on last imaging before LT (69.9% versus 83.1%; P = 0.002). In this analysis of HCC patients receiving DCD versus DBD livers in the UNOS database, we found that patients with a low-to-moderate risk of HCC recurrence (80%−90% of the DCD cohort) had equivalent survival regardless of donor type. It appears that DCD donation can best be used to increase the donor pool for HCC patients with decompensated cirrhosis or partial response/stable disease after locoregional therapy with AFP at LT
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- 2020
43. Abstract P277: Lower Gut Microbial Diversity in Non-alcoholic Fatty Liver Disease: Results From the Hispanic Community Health Study/Study of Latinos (HCHS/SOL)
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Robert D. Burk, Jessica Williams-Nguyen, Rob Knight, Carmen R. Isasi, Martha L. Daviglus, Robert C. Kaplan, Jin Choul Chai, Jee-Young Moon, Qibin Qi, Zheng Wang, Mark H. Kuniholm, Tao Wang, Scott J. Cotler, and Jorge R. Kizer
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business.industry ,Microbial diversity ,Fatty liver ,Physiology ,Non alcoholic ,Disease ,medicine.disease ,Chronic liver disease ,Obesity ,Physiology (medical) ,Nonalcoholic fatty liver disease ,Community health ,medicine ,Cardiology and Cardiovascular Medicine ,business - Abstract
Introduction: Nonalcoholic fatty liver disease (NAFLD) is associated with obesity and a leading cause of chronic liver disease in the United States (US). Prevalence of both conditions is higher in US Hispanics/Latinos compared to non-Hispanic whites. Composition of the gut microbiome, comprising the microorganisms in the gastrointestinal tract, has been associated with both NAFLD and obesity in animal and human studies, but there is currently no consensus on which microbial changes are associated with these two conditions. Data on the relation of the gut microbiome with NAFLD in Hispanic/Latino populations are limited. Hypothesis: We hypothesized that gut bacterial diversity is associated with NAFLD in Hispanic/Latino adults. Methods: This analysis included 2587 Hispanic/Latino adults in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) with fecal samples. The gut microbiome was characterized using shotgun metagenomic sequencing and taxonomic classification by the SHOGUN pipeline with the RefSeq 82 prokaryotic genome database. NAFLD was defined based on gender-specific liver function test thresholds developed in the National Health and Nutrition Examination Survey (NHANES) after excluding participants with other known causes of liver dysfunction. Alpha and beta diversity were compared between groups defined by NAFLD and obesity using multinomial logistic regression and PERMANOVA, respectively. The difference in relative abundance for the 15 most abundant species were compared using the Wilcoxon rank sum test. Results: There were 395 (15%) NAFLD cases among 2587 participants, and 1718 (66%) were women. Prevalence of obesity (BMI ≥ 30) was 58% and 42% among those with and without NAFLD, respectively. Higher bacterial alpha diversity (Shannon index) was associated with lower odds of NAFLD with (OR = 0.58, p = 0.0005) or without obesity (OR = 0.70, p = 0.04) compared to participants with neither condition after adjusting for age, gender, Hispanic background, diabetes, dyslipidemia and hypertension. In the same model, higher Shannon index was also associated with lower odds of obesity in the absence of NALFD (OR = 0.78, p = 0.01). Beta diversity (Bray-Curtis) did not differ significantly by NAFLD/obesity groups (p = 0.78) or by NAFLD alone (p = 0.30). Among the 15 most abundant species across samples, 4 ( Bacteroides uniformis , Odoribacter splanchnicus , Oscillibacter sp. ER4, and Alistipes shahii ) had significantly lower abundance in those with NAFLD compared to those without NAFLD irrespective of obesity. Conclusion: This study reveals that bacterial alpha diversity but not beta diversity is independently associated with the related conditions, NAFLD and obesity, in US Hispanic/Latino adults. Future work will explore associations between NAFLD and functional capacity of gut microbial components as well as considering relevant host genetic variants in this population.
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- 2020
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44. Letter to the Editor: Examining HBV‐RNA Kinetics During NA Treatment—Are NAs Multifunctional Antiviral Agents?
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Harel Dahari, Scott J. Cotler, and Andrew Vaillant
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Hepatitis B virus ,Kinetics ,Letter to the editor ,Hepatology ,Plant Extracts ,business.industry ,RNA, Viral ,Medicine ,business ,Antiviral Agents ,Virology - Published
- 2021
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45. Liver Injury with Features Mimicking Autoimmune Hepatitis following the Use of Black Cohosh
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Grace Guzman, Eric R. Kallwitz, Christina Wojewoda, Rohini Chennuri, Jamie Berkes, Thomas J. Layden, and Scott J. Cotler
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Medicine - Abstract
There are a growing number of cases detailing acute hepatic necrosis in patients taking black cohosh (Cimicifuga racemosa), an over-the-counter herbal supplement for management of menopausal symptoms. Our aim is to illustrate two cases of liver injury following the use of black cohosh characterized by histopathological features mimicking autoimmune hepatitis. Both patients reported black cohosh use for at least six months and had no evidence of another cause of liver disease. Their liver biopsies showed a component of centrilobular necrosis consistent with severe drug-induced liver injury. In addition, the biopsies showed characteristics of autoimmune-like liver injury with an interface hepatitis dominated by plasma cells. Although serum markers for autoimmune hepatitis were not particularly elevated, both patients responded to corticosteroids, supporting an immune-mediated component to the liver injury. Liver injury following the use of black cohosh should be included in the list of differential diagnoses for chronic hepatitis with features mimicking autoimmune hepatitis.
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- 2009
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46. Studies on the Tissue Localization of HKDC1, a Putative Novel Fifth Hexokinase, in Humans
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Michael Clarke, Brian T. Layden, Scott J. Cotler, Md. Wasim Khan, and Xianzhong Ding
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0301 basic medicine ,Histology ,Brush border ,Biology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Hexokinase ,Macrophages, Alveolar ,medicine ,Humans ,Glucose homeostasis ,Intestinal Mucosa ,Pancreas ,Articles ,Immunohistochemistry ,HKDC1 ,Epithelium ,Cell biology ,Intestines ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,030220 oncology & carcinogenesis ,Anatomy ,Function (biology) - Abstract
Hexokinase domain component 1 (HKDC1) is a recently discovered novel protein, which is being promoted as a putative fifth hexokinase. Although the exact role HKDC1 plays in physiology is still unclear, it has been shown to be important during pregnancy in the regulation of glucose homeostasis. In this study, we have comprehensively studied the expression pattern of HKDC1 in the human body. Using human tissue sample, immunohistochemistry imaging was performed. Our studies indicate that the tissues with highest HKDC1 expression were the brush border epithelium of the intestines, parts of the pancreas, and lung alveolar macrophages. Future directions will be to understand the role of this fifth hexokinase in these tissues, with a focus on its relative function as compared with other endogenously expressed hexokinases.
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- 2018
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47. Early HBV RNA kinetics under NA treatment may reveal new insights into HBV RNA dynamics and NA mode of action‐more detailed kinetic studies are needed
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Amir Shlomai, Scott J. Cotler, and Harel Dahari
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Infectious Diseases ,Hepatology ,Viral dynamics ,Chemistry ,Virology ,Dynamics (mechanics) ,Kinetics ,Biophysics ,Mode of action - Published
- 2021
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48. Adverse Effect of Post-Discharge Care Fragmentation on Outcomes after Readmissions after Liver Transplantation
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Veronica Loy, Sarah A. Brownlee, Anai N. Kothari, Paul C. Kuo, Colleen Schaidle-Blackburn, Yoshiki Ezure, Amy D. Lu, Diego di Sabato, and Scott J. Cotler
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Male ,Pediatrics ,medicine.medical_specialty ,Time Factors ,Orthotopic liver transplantation ,Post discharge ,medicine.medical_treatment ,Liver transplantation ,Patient Readmission ,Risk Assessment ,California ,Odds ,03 medical and health sciences ,Postoperative Complications ,0302 clinical medicine ,Risk Factors ,medicine ,Humans ,Hospital Mortality ,Healthcare Cost and Utilization Project ,Adverse effect ,Retrospective Studies ,business.industry ,Odds ratio ,Middle Aged ,Patient Discharge ,Liver Transplantation ,Transplantation ,Cross-Sectional Studies ,030220 oncology & carcinogenesis ,Emergency medicine ,Florida ,Female ,030211 gastroenterology & hepatology ,Surgery ,business - Abstract
Background Post-discharge surgical care fragmentation is defined as readmission to any hospital other than the hospital at which surgery was performed. The objective of this study was to assess the impact of fragmented readmissions within the first year after orthotopic liver transplantation (OLT). Study Design The Healthcare Cost and Utilization Project State Inpatient Databases for Florida and California from 2006 to 2011 were used to identify OLT patients. Post-discharge fragmentation was defined as any readmission to a non-index hospital, including readmitted patients transferred to the index hospital after 24 hours. Outcomes included adverse events, defined as 30-day mortality and 30-day readmission after a fragmented readmission. All statistical analyses considered a hierarchical data structure and were performed with multilevel, mixed-effects models. Results We analyzed 2,996 patients with 7,485 readmission encounters at 299 hospitals; 1,236 (16.5%) readmissions were fragmented. After adjustment for age, sex, readmission reason, index liver transplantation cost, readmission length of stay, number of previous readmissions, and time from transplantation, post-discharge fragmentation increased the odds of both 30-day mortality (odds ratio [OR] = 1.75; 95% CI 1.16 to 2.65) and 30-day readmission (OR = 2.14; 95% CI 1.83 to 2.49). Predictors of adverse events after a fragmented readmission included increased number of previous readmissions (OR = 1.07; 95% CI 1.01 to 1.14) and readmission within 90 days of OLT (OR = 2.19; 95% CI 1.61 to 2.98). Conclusions Post-discharge fragmentation significantly increases the risk of both 30-day mortality and subsequent readmission after a readmission in the first year after OLT. More inpatient visits before a readmission and less time elapsed from index surgery increase the odds of an adverse event after discharge from a fragmented readmission. These parameters could guide transfer decisions for patients with post-discharge fragmentation.
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- 2017
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49. Pharmacokinetics and pharmacodynamics modeling of lonafarnib in patients with chronic hepatitis delta virus infection
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David E. Kleiner, Ma Ai Thanda Han, Laetitia Canini, Susan L. Uprichard, Jeffrey S. Glenn, Ramazan Idilman, Harel Dahari, Cihan Yurdaydin, Christopher Koh, Theo Heller, Scott J. Cotler, and Mark A. Winters
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medicine.medical_specialty ,Gastroenterology ,Virus ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Pharmacokinetics ,Internal medicine ,medicine ,In patient ,Lonafarnib ,030304 developmental biology ,EC50 ,0303 health sciences ,Hepatology ,business.industry ,Original Articles ,medicine.disease ,Hepatitis D ,Virology ,3. Good health ,chemistry ,030220 oncology & carcinogenesis ,Pharmacodynamics ,Original Article ,030211 gastroenterology & hepatology ,business - Abstract
The prenylation inhibitor lonafarnib (LNF) is a potent antiviral agent providing a breakthrough for the treatment of hepatitis delta virus (HDV). The current study used a maximum likelihood approach to model LNF pharmacokinetic (PK) and pharmacodynamic (PD) parameters and predict the dose needed to achieve 99% efficacy using data from 12 patients chronically infected with HDV and treated with LNF 100 mg twice daily (bid) (group 1) or 200 mg bid (group 2) for 28 days. The LNF-PK model predicted average steady-state LNF concentrations of 860 ng/mL and 1,734 ng/mL in groups 1 and 2, respectively, with an LNF absorption rate ka = 0.43/hour and elimination rate ke = 0.045/hour. The PK/PD model identified an average delay of 0.56 hours and an LNF concentration that decreases HDV production by 50%, EC50 = 227 ng/mL, with a Hill factor h = 1.48. The HDV half-life in blood was 1.87 days, and the average steady-state LNF efficacy in blocking HDV production was ɛ = 87.7% for group 1 and ɛ = 95.2% for group 2. A biphasic HDV decline with an average phase 1 decline (0.9 log10 IU/mL and 1.32 log10 IU/mL) was observed in groups 1 and 2, respectively. Phase 2 was not significantly (P = 0.94) different between the two groups, with an average slope of -0.06 log IU/mL/day. The model suggests an LNF dose of ∼610 mg bid would achieve ɛ = 99%. Conclusion: The first PK/PD modeling study in patients with chronic HDV indicates that a ∼3-fold increase in LNF dose (∼610 mg bid) would achieve 99% antiviral efficacy. A ritonavir-boosted LNF combination may provide a means to increase LNF efficacy with minimal side effects. The modeling findings provide an important advance in understanding HDV dynamics and the basis to optimize LNF therapy for hepatitis D. (Hepatology Communications 2017;1:288-292).
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- 2017
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50. Efficacy and Safety of Modeling-Based Response Guided Therapy with Direct Acting Anti-Viral Agents for Treatment Optimization in Chronic Hepatitis C Infection- A Pilot Study
- Author
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Orly Sneh Arbib, Harel Dahari, Naim Abu-Freha, Orna Mor, Daniela Munteanu, Susan L. Uprichard, Marius Braun, Ayelet Keren-Naos, Assaf Issachar, Amir Shlomai, Victor Novack, Yonat Shemer-Avni, Ohad Etzion, Anat Nevo-Shor, Yafa Ashur, Scott J. Cotler, Jayanah Murad, Michal Cohen-Naftaly, and David Yardeni
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Ledipasvir ,medicine.medical_specialty ,Elbasvir ,Sofosbuvir ,business.industry ,Glecaprevir ,Pibrentasvir ,chemistry.chemical_compound ,Grazoprevir ,chemistry ,Informed consent ,Internal medicine ,medicine ,Clinical endpoint ,business ,medicine.drug - Abstract
Background: The advent of direct-acting antivirals (DAAs) has transformed the landscape of hepatitis C virus (HCV) management. However, the high cost of DAAs therapy has become a major barrier to HCV elimination. We aimed to prospectively evaluate the efficacy and safety of reducing the duration of DAAs therapy using response-guided therapy approach based on mathematical modeling of viral kinetics. Methods: Patients were treated with DAAs according to the physicians’ preference. HCV was measured at baseline and at day 2 and weeks 1, 2 and 4 after treatment initiation. The primary endpoint was the proportion of patients with sustained-virological response (SVR) at 12 and/or 24 weeks post-treatment. Findings: Twenty-nine patients (mean age 54±16, 44% females, 73% with HCV genotype 1), were enrolled and all completed therapy. Sofosbuvir/velpatasvir, elbasvir/grazoprevir, sofosbuvir/ledipasvir and glecaprevir/pibrentasvir, were administered in 38%, 27%, 21% and 14% of patients, respectively. Treatment duration was shortened in 11 of the 29 patients (38%). SVR was achieved in 28 of the 29 patients (97%). Relapse occurred post treatment in a single case of a non-cirrhotic male with genotype 3, who was treated with sofosbuvir/velpatasvir for 6 weeks. Virus sequencing did not identify baseline or treatment emergent resistance associated substitutions. Interpretation: Real-time modeling can be utilized for shortening DAAs duration in approximately 40% of patients without compromising treatment efficacy. Implementation of this model on a wider scale may lead to significant cost-saving and to improved access to anti-HCV care. Trial Registration: ClinicalTrials.gov Identifier: NCT03603327. Funding Statement: This research was supported in part by Clalit Health Services and the National Institutes of Health (NIH) and extramural NIH grants R01-AI078881 and R01GM121600. Declaration of Interests: OE has consulted for Gilead and Abbvie and received lecture fees from Gilead, Abbvie and MSD. HD has consulted for CoCrystal Inc. None of the other authors has any financial interest or conflict of interest related to this research. Ethics Approval Statement: The study was approved by the institutional review boards of Soroka and Rabin Medical Centers and was conducted in compliance with the Declaration of Helsinki, Good Clinical Practice guidelines, and local regulatory requirements. All patients provided written informed consent.
- Published
- 2020
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