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Greenhouse gas (GHG) emissions from small inland waters are disproportionately large. Climate warming is expected to favor dominance of algae and free-floating plants at the expense of submerged plants. Through different routes these functional plant types may have far-reaching impacts on freshwater GHG emissions in future warmer waters, which are yet unknown. We conducted a 1,000 L mesocosm experiment testing the effects of plant type and warming on GHG emissions from temperate inland waters dominated by either algae, free-floating or submerged plants in controls and warmed (+4 °C) treatments for one year each. Our results show that the effect of experimental warming on GHG fluxes differs between dominance of different functional plant types, mainly by modulating methane ebullition, an often-dominant GHG emission pathway. Specifically, we demonstrate that the response to experimental warming was strongest for free-floating and lowest for submerged plant-dominated systems. Importantly, our results suggest that anticipated shifts in plant type from submerged plants to a dominance of algae or free-floating plants with warming may increase total GHG emissions from shallow waters. This, together with a warming-induced emission response, represents a so far overlooked positive climate feedback. Management strategies aimed at favouring submerged plant dominance may thus substantially mitigate GHG emissions.

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Fluxes of carbon dioxide (CO2) and methane (CH4) in shallow lakes are strongly affected by dominant primary producers which mostly has been studied in temperate and boreal regions. We compared summer CO2 and CH4 fluxes (diffusion and ebullition) in littoral and pelagic zones of three subtropical shallow lakes with contrasting regimes: clear-vegetated, phytoplankton-turbid, and sediment-turbid, and assessed fluxes in different seasons in the clear-vegetated system. Significant differences among the lakes occurred only for CH4 fluxes. In the sediment-turbid lake we found undersaturated CH4 concentrations were below atmospheric equilibrium, implying CH4 uptake (< 0 mg m−2 day−1), likely due to low availability of organic matter. Differences between zones occurred in the clear-vegetated and phytoplankton-turbid lakes, with higher total CH4 emissions in the littoral than in the pelagic zones (mean: 4342 ± 895 and 983 ± 801 mg m−2 day−1, respectively). CO2 uptake (< < 0 mg m−2 day−1) occurred in the littoral of the phytoplankton-turbid lake (in summer), and in the pelagic of the clear-vegetated lake even in winter, likely associated with submerged macrophytes dominance. Our work highlights the key role of different primary producers regulating carbon fluxes in shallow lakes and points out that, also in the subtropics, submerged macrophyte dominance may decrease carbon emissions to the atmosphere.

To investigate the potential long-term consequences of environmental warming in subtropical systems, we compare the trophic structure of shallow lakes in tropical and subtropical regions. In total, 25 meso-eutrophic lakes with piscivorous fish were sampled during summer along a latitudinal gradient in South America. The fish catch per unit of effort and the omnivorous fish to zooplankton biomass ratios were significantly lower in the tropical lakes. Despite the lower fish biomass, no significant difference was found in zooplankton or phytoplankton communities or in the zooplankton to phytoplankton biomass ratio between the two sets of lakes. Nevertheless, regression models based on the combined dataset show higher cyanobacteria and total phytoplankton biomass at lower zooplankton to phytoplankton biomass ratio and higher omnivorous fish to zooplankton biomass ratio. Cyanobacteria biomass was dominated by non bloom-forming taxa and was inversely related to the biomass of calanoid copepods suggesting that these herbivores may play an important role in controlling edible cyanobacteria in warm shallow lakes. Overall, our results, however, suggest that warming will have relatively minor impacts on the pelagic trophic structure of shallow subtropical lakes supporting the idea of weaker trophic cascades in warm (sub)tropical lakes in comparison to temperate ones.

Shallow aquatic systems exchange large amounts of carbon dioxide (CO2) and methane (CH4) with the atmosphere. The production and consumption of both gases is determined by the interplay between abiotic (such as oxygen availability) and biotic (such as community structure and trophic interactions) factors. Fish communities play a key role in driving carbon fluxes in benthic and pelagic habitats. Previous studies indicate that trophic interactions in the water column, as well as in the benthic zone can strongly affect aquatic CO2 and CH4 net emissions. However, the overall effect of fish on both pelagic and benthic processes remains largely unresolved, representing the main focus of our experimental study. We evaluated the effects of benthic and pelagic fish on zooplankton and macroinvertebrates; on CO2 and CH4 diffusion and ebullition, as well as on CH4 production and oxidation, using a full-factorial aquarium experiment. We compared five treatments: absence of fish (control); permanent presence of benthivorous fish (common carps, benthic) or zooplanktivorous fish (sticklebacks, pelagic); and intermittent presence of carps or sticklebacks. We found trophic and non-trophic effects of fish on CO2 and CH4 emissions. Intermittent presence of benthivorous fish promoted a short-term increase in CH4 ebullition, probably due to the physical disturbance of the sediment. As CH4 ebullition was the major contributor to the total greenhouse gas (GHG) emissions, incidental bioturbation by benthivorous fish was a key factor triggering total carbon emissions from our aquariums. Trophic effects impacted GHG dynamics in different ways in the water column and the sediment. Fish predation on zooplankton led to a top-down trophic cascade effect on methane-oxidising bacteria. This effect was, however, not strong enough as to substantially alter CH4 diffusion rates. Top-down trophic effects of zooplanktivorous and benthivorous fish on benthic macroinvertebrates, however, were more pronounced. Continuous fish predation reduced benthic macroinvertebrates biomass decreasing the oxygen penetration depth, which in turn strongly reduced water–atmosphere CO2 fluxes while it increased CH4 emission. Our work shows that fish can strongly impact GHG production and consumption processes as well as emission pathways, through trophic and non-trophic effects. Furthermore, our findings suggest their impact on benthic organisms is an important factor regulating carbon (CO2 and CH4) emissions.

Unravelling patterns and mechanisms of biogeographical transitions is crucial if we are to understand compositional gradientsat large spatial extents, but no studies have thus far examined breakpoints in community composition of freshwater plants acrosscontinents. Using a dataset of almost 500 observations of lake plant community composition from six continents, we examined,for the first time, if such breakpoints in geographical space exist for freshwater plants and how well a suite of ecological factors(including climatic and local environmental variables) can explain transitions in community composition from the subtropicsto the poles. Our combination of multivariate regression tree (MRT) analysis and k-means partitioning suggests that the mostabrupt breakpoint exists between temperate to boreal regions on the one hand and freshwater plant communities harbouringmainly subtropical or Mediterranean assemblages on the other. The spatially structured variation in current climatic conditionsis the most likely candidate for controlling these latitudinal patterns, although one cannot rule out joint effects of eco-evolutionary constraints in the harsher high-latitude environments and post-glacial migration lags after Pleistocene Ice Ages. Overall, ourstudy supports the foundations of global regionalisation for freshwater plants and anticipates further biogeographical researchon freshwater plant communities once datasets have been harmonised for conducting large-scale spatial analyses.

Shallow lakes can shift between stable states as a result of anthropogenic or natural drivers. Four common stable states differ in dominant groups of primary producers: submerged, floating, or emergent macrophytes or phytoplankton. Shifts in primary producer dominance affect key supporting, provisioning, regulating, and cultural ecosystem services supplied by lakes. However, links between states and services are often neglected or unknown in lake management, resulting in conflicts and additional costs. Here, we identify major shallow lake ecosystem services and their links to Sustainable Development Goals (SDGs), compare service provisioning among the four ecosystem states and discuss potential trade-offs. We identified 39 ecosystem services potentially provided by shallow lakes. Submerged macrophytes facilitate most of the supporting (86%) and cultural (63%) services, emergent macrophytes facilitate most regulating services (60%), and both emergent and floating macrophytes facilitate most provisioning services (63%). Phytoplankton dominance supports fewer ecosystem services, and contributes most to provisioning services (42%). The shallow lake ecosystem services we identified could be linked to 10 different SDGs, notably zero hunger (SDG 2), clean water and sanitation (SDG 6), sustainable cities and communities (SDG 11), and climate action (SDG13). We highlighted several trade-offs (1) among ecosystem services, (2) within ecosystem services, and (3) between ecosystem services across ecosystems. These trade-offs can have significant ecological and economic consequences that may be prevented by early identification in water quality management. In conclusion, common stable states in shallow lakes provide a different and diverse set of ecosystem services with numerous links to the majority of SDGs. Conserving and restoring ecosystem states should account for potential trade-offs between ecosystem services and preserving the natural value of shallow lakes.

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Microbes play a critical role in plant litter decomposition and influence the fate of carbon in rivers and riparian zones. When decomposing low-nutrient plant litter, microbes acquire nitrogen (N) and phosphorus (P) from the environment (i.e., nutrient immobilization), and this process is potentially sensitive to nutrient loading and changing climate. Nonetheless, environmental controls on immobilization are poorly understood because rates are also influenced by plant litter chemistry, which is coupled to the same environmental factors. Here we used a standardized, low-nutrient organic matter substrate (cotton strips) to quantify nutrient immobilization at 100 paired stream and riparian sites representing 11 biomes worldwide. Immobilization rates varied by three orders of magnitude, were greater in rivers than riparian zones, and were strongly correlated to decomposition rates. In rivers, P immobilization rates were controlled by surface water phosphate concentrations, but N immobilization rates were not related to inorganic N. The N:P of immobilized nutrients was tightly constrained to a molar ratio of 10:1 despite wide variation in surface water N:P. Immobilization rates were temperature-dependent in riparian zones but not related to temperature in rivers. However, in rivers nutrient supply ultimately controlled whether microbes could achieve the maximum expected decomposition rate at a given temperature. Collectively, we demonstrated that exogenous nutrient supply and immobilization are critical control points for decomposition of organic matter. Key Points • Nitrogen (N) and phosphorus (P) immobilization was measured on organic matter (cotton) in 100 rivers and riparian zones representing 11 biomes • Elevated temperature in riparian zones and phosphate in rivers increased immobilization, and consequently accelerated decomposition • N and P immobilization was strongly linked by microbial stoichiometry despite widely varied surface-water nutrient ratios Plain Language Summary Bacteria and fungi contribute to the breakdown of leaf litter in rivers and floodplains. To break down leaf litter, these microbes need the nutrients nitrogen and phosphorus (P), and microbes can get nutrients either from the leaf litter itself or from the environment. Most leaf litter has low nutrient content and microbes must rely on the environment to supply nutrients. We studied microbial nutrient uptake from the environment during litter breakdown to determine whether it varies predictably across the globe and how it is influenced by changing climate and nutrient pollution. In 100 rivers and floodplains in 11 of Earth's major biomes we placed small strips of cotton as stand-ins for leaf litter. Nutrient uptake was consistently greater on cotton strips that were submerged in the river compared to cotton on the floodplain. For microbes in the river, nutrient uptake was faster in instances where there was more P in the water. For microbes in the floodplain, nutrient uptake was faster where temperatures were warmer. Faster nutrient uptake by microbes was linked with faster cotton breakdown in rivers and floodplains. Our study shows that climate change and nutrient pollution can alter the activity of microbes in rivers and floodplains.

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Freshwater ecosystems, including wetlands, lakes, and running waters, are estimated to contribute roughly 40% to global emissions of methane (CH4), a highly potent greenhouse gas. The emission of CH4 to the atmosphere entails the diffusive, ebullitive, and plant-mediated pathway. The latter, in particular, has been largely understudied and is neither well understood nor quantified. We have conducted a semi-quantitative literature review to (i) provide a synthesis of the different ways vegetated habitats can influence CH4 dynamics (i.e., production, consumption, and transport) in freshwater ecosystems, (ii) provide an overview of methods applied to study the fluxes from vegetated habitats, and (iii) summarize the existing data on CH4 fluxes associated to different types of vegetated habitats and their range of variation. Finally, we discuss the implications of CH4 fluxes associated with aquatic vegetated habitats for current estimates of aquatic CH4 emissions at the global scale. We identified 13 different aspects in which plants impact CH4 dynamics (three related to gaseous CH4 flux pathways) and ten approaches used to study and quantify fluxes from vegetated habitats. The variability of the fluxes from vegetated areas was very high, varying from -454.4 mg CH4 m-2 d-1 (uptake) to 2882.4 mg CH4 m-2 d-1 (emission). This synthesis highlights the need to incorporate vegetated habitats into CH4 emission budgets from natural freshwater ecosystems and further identifies understudied research aspects and relevant future research directions.

Despite substantial advances in quantifying greenhouse gas (GHG) emissions from dry inland waters, existing estimates mainly consist of carbon dioxide (CO

The restoration of degraded ecosystems and landscapes is challenging, because returning to the original state is often socio-economically unfeasible. A novel approach is to construct new ecosystems to improve the functioning of degraded landscapes. However, the development of novel ecosystems is largely driven by the pre-construction hydrogeophysical and ecological conditions of the soil. In Lake Markermeer, a deteriorating freshwater lake in the Netherlands, a large archipelago is currently being constructed to boost the ecological functioning of the lake. Hence, islands – with wetlands and with more elevated and dryer areas – have been created to sustain biodiversity and key biogeochemical functions such as nutrient cycling. The islands are constructed from lake-bottom sediments. To study how two potentially important drivers, water level and bioturbation, affect soil characteristics in a novel wetland ecosystem, we experimentally tested the effects of water level (-30, -10 and 5 cm), and bioturbation by earthworms (Lumbricus rubellus) and Tubifex spp. in a microcosm experiment. We demonstrate that a high water level prevents soil subsidence, soil crack formation and carbon dioxide (CO2) emissions, and affects nitrogen cycling. In dryer soils, the presence of earthworms strongly increases CO2 emissions next to reducing soil crack formation, while Tubifex spp. in wetter soils hardly affect soil characteristics. Our findings highlight the important roles of both water level and bioturbation for the functioning of novel soils, which likely affects vegetation development in novel ecosystems. This knowledge can be used to aid the construction and nature development of novel wetlands.

Artificial water bodies like ditches, fish ponds, weirs, reservoirs, fish ladders, and irrigation channels are usually constructed and managed to optimize their intended purposes. However, human-made aquatic systems also have unintended consequences on ecosystem services and biogeochemical cycles. Knowledge about their functioning and possible additional ecosystem services is poor, especially compared to natural ecosystems. A GIS analysis indicates that currently only ~ 10% of European surface waters are covered by the European Water Framework directive, and that a considerable fraction of the excluded systems are likely human-made aquatic systems. There is a clear mismatch between the high possible significance of human-made water bodies and their low representation in scientific research and policy. We propose a research agenda to build an inventory of human-made aquatic ecosystems, support and advance research to further our understanding of the role of these systems in local and global biogeochemical cycles as well as to identify other benefits for society. We stress the need for studies that aim to optimize management of human-made aquatic systems considering all their functions and to support programs designed to overcome barriers of the adoption of optimized management strategies. MK and PSK were financially supported by the German Research Foundation (DFG) (project TregaTa, KO 1911/6- 1). JH was financially supported by the Grant Agency of the Czech Republic, project no. 17-09310S. RM was supported by project C-HydroChange funded by the Spanish Ministry of Economy, Industry and Competitiveness (CGL2017-86788-C3-2-P). AL was supported by Estonian Research Council Grants PSG 32 and IUT 21-2 of the Estonian Ministry of Education and Research. This study benefitted from the collaborative environment of the GLEON network. MK and PSK were financially supported by the German Research Foundation (DFG) (project TregaTa, KO 1911/6- 1). JH was financially supported by the Grant Agency of the Czech Republic, project no. 17-09310S. RM was supported by project C-HydroChange funded by the Spanish Ministry of Economy, Industry and Competitiveness (CGL2017-86788-C3-2-P). AL was supported by Estonian Research Council Grants PSG 32 and IUT 21-2 of the Estonian Ministry of Education and Research. This study benefitted from the collaborative environment of the GLEON network.

The role of tropical lakes and reservoirs in the global carbon cycle has received increasing attention in the past decade, but our understanding of its variability is still limited. The metabolism of tropical systems may differ profoundly from temperate systems due to the higher temperatures and wider variations in precipitation. Here, we investigated the spatial and temporal patterns of the variability in the partial pressure of carbon dioxide (pCO2) and its drivers in a set of 102 low-latitude lakes and reservoirs that encompass wide gradients of precipitation, productivity and landscape properties (lake area, perimeter-to-area ratio, catchment size, catchment area-to-lake area ratio, and types of catchment land use). We used multiple regressions and structural equation modeling (SEM) to determine the direct and indirect effects of the main in-lake variables and landscape properties on the water pCO2 variance. We found that these systems were mostly supersaturated with CO2 (92% spatially and 72% seasonally) regardless of their trophic status and landscape properties. The pCO2 values (9–40,020 μatm) were within the range found in tropical ecosystems, and higher (p

Water hyacinth (WH), a large floating plant, plays an important role in the biogeochemistry and ecology of many freshwaters globally. Its biogeochemical impact on wetland functioning is strongly mediated by the microbiome associated with its roots. However, little is known about the structure and function of this WH rhizobiome and its relation to wetland ecosystem functioning. Here, we unveil the core and transient rhizobiomes of WH and their key biogeochemical functions in two of the world's largest wetlands: the Amazon and the Pantanal. WH hosts a highly diverse microbial community shaped by spatiotemporal changes. Proteobacteria lineages were most common, followed by Actinobacteria and Planctomycetes. Deltaproteobacteria and Sphingobacteriia predominated in the core microbiome, potentially associated with polysaccharide degradation and fermentation of plant-derived carbon. Conversely, a plethora of lineages were transient, including highly abundant Acinetobacter, Acidobacteria subgroup 6, and methanotrophs, thus assuring diverse taxonomic signatures in the two different wetlands. Our findings point out that methanogenesis is a key driver of, and proxy for, community structure, especially during seasonal plant decline. We provide ecologically relevant insights into the WH microbiome, which is a key element linking plant-associated carbon turnover with other biogeochemical fluxes in tropical wetlands.

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International audience; River plastic pollution is an environmental challenge of growing concern. However, there are still many unknowns related to the principal drivers of river plastic transport. Floating aquatic vegetation, such as water hyacinths, have been found to aggregate and carry large amounts of plastic debris in tropical river systems. Monitoring the entrapment of plastics in hyacinths is therefore crucial to answer the relevant scientific and societal questions. Longterm monitoring efforts are yet to be designed and implemented at large scale and various field measuring techniques can be applied. Here, we present a field guide on available methods that can be upscaled in space and time, to characterize macroplastic entrapment within floating vegetation. Five measurement techniques commonly used in plastic and vegetation monitoring were applied to the Saigon river, Vietnam. These included physical sampling, Unmanned Aerial Vehicle imagery, bridge imagery, visual counting, and satellite imagery. We compare these techniques based on their suitability to derive metrics of interest, their relevancy at different spatiotemporal scales and their benefits and drawbacks. This field guide can be used by practitioners and researchers to design future monitoring campaigns and to assess the suitability of each method to investigate specific aspects of macroplastic and floating vegetation interactions.

Despite substantial advances in quantifying greenhouse gas (GHG) emissions from dry inland waters, existing estimates mainly consist of carbon dioxide (CO2) emissions. However, methane (CH4) may also be relevant due to its higher Global Warming Potential (GWP). We report CH4 emissions from dry inland water sediments to i) provide a cross-continental estimate of such emissions for different types of aquatic systems (i.e., lakes, ponds, reservoirs, and streams) and climate zones (i.e., tropical, continental, and temperate); and ii) determine the environmental factors that control these emissions. CH4 emissions from dry inland waters were consistently higher than emissions observed in adjacent uphill soils, across climate zones and in all aquatic systems except for streams. However, the CH4 contribution (normalized to CO2 equivalents; CO2-eq) to the total GHG emissions of dry inland waters was similar for all types of aquatic systems and varied from 10 to 21%. Although we discuss multiple controlling factors, dry inland water CH4 emissions were most strongly related to sediment organic matter content and moisture. Summing CO2 and CH4 emissions revealed a cross-continental average emission of 9.6 ± 17.4 g CO2-eq m−2 d−1 from dry inland waters. We argue that increasing droughts likely expand the worldwide surface area of atmosphere-exposed aquatic sediments, thereby increasing global dry inland water CH4 emissions. Hence, CH4 cannot be ignored if we want to fully understand the carbon (C) cycle of dry sediments.

Globally, there are millions of kilometres of drainage ditches which have the potential to emit the powerful greenhouse gas methane (CH4), but these emissions are not reported in budgets of inland waters or drained lands. Here, we synthesise data to show that ditches spanning a global latitudinal gradient and across different land uses emit large quantities of CH4 to the atmosphere. Area-specific emissions are comparable to those from lakes, streams, reservoirs, and wetlands. While it is generally assumed that drainage negates terrestrial CH4 emissions, we find that CH4 emissions from ditches can, on average, offset ∼10% of this reduction. Using global areas of drained land we show that ditches contribute 3.5 Tg CH4 yr−1 (0.6–10.5 Tg CH4 yr−1); equivalent to 0.2%–3% of global anthropogenic CH4 emissions. A positive relationship between CH4 emissions and temperature was found, and emissions were highest from eutrophic ditches. We advocate the inclusion of ditch emissions in national GHG inventories, as neglecting them can lead to incorrect conclusions concerning the impact of drainage-based land management on CH4 budgets.

Excess of plastic debris in the environment is a worldwide problem. The origin of the plastic sources is partly land-based, the function of rivers as transportation pathways for plastics is an emerging research field. However, the transportation dynamics of macroplastic in river systems are still poorly understood(Blettler et al., 2018; Schmidt et al., 2017). By studying the interaction of riverine plastic transport and water plants, the transport dynamics can be better understood, which might help with the mitigation of the environmental plastic debris problem. A field study based in the Saigon river, Vietnam, found a correlation between macroplastic(>5 cm) abundance and organic material, where no other correlations were found(van Emmerik et al., 2019). We hypothesize that water hyacinths have an important role in the spatiotemporal dynamics of riverine macroplastic transport. The organic material in this river was predominantly identified as water hyacinths, an invasive plant common in Southeast Asia. In this study, we developed a method using image analysis, to detect macro plastics and floating vegetation(lab-grown water hyacinths). Image analysis in combination with drone technology creates opportunities to collect field data, with already promising results(Geraeds et al., 2019). We analyzed the images, to obtain an approximation of the amount of plastic and vegetation, visible from the surface. We subsequently use this data to evaluate the relationship between plastic abundance and vegetation in rivers. The method developed in this study can be used to collect data in the field. Targeted observations of plastic entrapment in water hyacinths may shed additional light on the potential of using water hyacinths as a proxy for riverine macroplastic transport dynamics. ReferencesM. C. Blettler, E. Abrial, F. R. Khan, N. Sivri, and L. A. Espinola. Freshwater plastic pollution:Recognizing research biases and identifying knowledge gaps. Water research, 143:416-424, 2018.M. Geraeds, T. van Emmerik, R. de Vries, and M. S. bin Ab Razak. Riverine plastic litter monitoring using unmanned aerial vehicles (uavs). Remote Sensing, 11(17):2045, 2019.C. Schmidt, T. Krauth, and S.Wagner. Export of plastic debris by rivers into the sea. Environmental science & technology, 51(21):12246-12253, 2017.T. van Emmerik, E. Strady, T.-C. Kieu-Le, L. Nguyen, and N. Gratoit. Seasonality of riverine macroplastic transport. Nature Scientific Reports, 2019.

Documenting the patterns of biological diversity on Earth has always been a central challenge in macroecology and biogeography. However, for the diverse group of freshwater plants, such research program is still in its in- fancy. Here, we examined global variation in taxonomic, functional and phylogenetic beta diversity patterns of lake macrophytes using regional data from six continents. A data set of ca. 480 lake macrophyte community ob- servations, together with climatic, geographical and environmental variables, was compiled across 16 regions worldwide. We (a) built the very first phylogeny comprising most freshwater plant lineages; (b) exploited a wide array of functional traits that are important to macrophyte autoecology or that relate to lake ecosystem functioning; (c) assessed if different large-scale beta diversity patterns show a clear latitudinal gradient from the equator to the poles using null models; and (d) employed evolutionary and regression models to first identify the degree to which the studied functional traits show a phylogenetic signal, and then to estimate community- environment relationships at multiple spatial scales. Our results supported the notion that ecological niches evolved independently of phylogeny in macrophyte lineages worldwide. We also showed that taxonomic and phylogenetic beta diversity followed the typical global trend with higher diversity in the tropics. In addition, we were able to confirm that species, multi-trait and lineage compositions were first and foremost structured by climatic conditions at relatively broad spatial scales. Perhaps more importantly, we showed that large-scale processes along latitudinal and elevational gradients have left a strong footprint in the current diversity patterns and community-environment relationships in lake macrophytes. Overall, our results stress the need for an inte- grative approach to macroecology, biogeography and conservation biology, combining multiple diversity facets at different spatial scales. JGG appreciates financial support from the Spanish Ministry of Economy and Industry [project METAPONDS, grant CGL2017- 84176R], the Junta de Castilla y León [grant LE004G18] and from the Fundación Biodiversidad (Spanish Ministry for Ecological Transi- tion and Demographic Challenge). BAL was supported by National Research, Development and Innovation Fund [grant NKFIH, OTKA PD120775] and by the Bolyai János Research Scholarship of the Hun- garian Academy of Sciences. S.K. was supported by NWO Veni [grant 86312012]. Sampling of the coastal Brazilian lakes was financed by NWO [grant W84-549]; The National Geographic Society [grant 7864-5]; and CNPq [grants 480122, 490409, 311427]. We thank the SALGA team, especially Gissell Lacerot, Nestor Mazzeo, Vera Huszar, David da Motta Marques, and Erik Jeppesen for organizing and exe- cuting the SALGA field sampling campaign and Bruno Irgang† and Eduardo Alonso Paz for helping with identification. We thank Minne- sota and Wisconsin Departments of Natural Resources for collecting the macrophyte data. We are grateful to Carol Reschke for her work in combining and performing quality control for the Minnesota mac- rophyte data used in the analysis. This is contribution no. 607 of the Natural Resources Research Inst. of the Univ. of Minnesota Duluth. Provision of New Zealand macrophyte data was possible via NIWA SSIF funding. JGG appreciates financial support from the Spanish Ministry of Economy and Industry [project METAPONDS, grant CGL2017- 84176R], the Junta de Castilla y León [grant LE004G18] and from the Fundación Biodiversidad (Spanish Ministry for Ecological Transi- tion and Demographic Challenge). BAL was supported by National Research, Development and Innovation Fund [grant NKFIH, OTKA PD120775] and by the Bolyai János Research Scholarship of the Hun- garian Academy of Sciences. S.K. was supported by NWO Veni [grant 86312012]. Sampling of the coastal Brazilian lakes was financed by NWO [grant W84-549]; The National Geographic Society [grant 7864-5]; and CNPq [grants 480122, 490409, 311427]. We thank the SALGA team, especially Gissell Lacerot, Nestor Mazzeo, Vera Huszar, David da Motta Marques, and Erik Jeppesen for organizing and exe- cuting the SALGA field sampling campaign and Bruno Irgang† and Eduardo Alonso Paz for helping with identification. We thank Minne- sota and Wisconsin Departments of Natural Resources for collecting the macrophyte data. We are grateful to Carol Reschke for her work in combining and performing quality control for the Minnesota mac- rophyte data used in the analysis. This is contribution no. 607 of the Natural Resources Research Inst. of the Univ. of Minnesota Duluth. Provision of New Zealand macrophyte data was possible via NIWA SSIF funding.

Water hyacinth is able to sequester large amounts of carbon dioxide (CO2) in wetlands. At the same time, the high production of organic matter combined with the plant’s capacity to limit the diffusion of oxygen from the atmosphere into the water creates favorable conditions for the production of methane (CH4). The combination of these mechanisms challenges the prediction of water hyacinth’s net effects on greenhouse gas (GHG) emissions. To unravel the impact of water hyacinth on GHG fluxes, we performed an extensive fieldwork study encompassing 22 sites dominated by water hyacinth in the Pantanal and Amazon during two different seasons. The highest CH4 emissions from water hyacinth beds occurred in shallow systems where sediment rooting enabled plant-mediated CH4 transport (307 ± 407 mg CH4 m−2 day−1 in waters shallower than 1 m, as opposed to 6.1 ± 10.6 mg CH4 m−2 day−1 in deeper waters). When CO2 uptake rates are added to the GHG budget (in terms of global warming potential), the water bodies were usually a GHG sink (− 5.2 ± 10 gCO2 eq m−2 day−1). The strength of the sink is highest in deeper systems where even a low water hyacinth coverage may already offset open water emissions. This dual effect of strong CO2 uptake—and at least temporal carbon storage in biomass—in combination with a high CO2–to-biomass-to-CH4 (and possibly back to CO2) conversion highlights the necessity to include vegetation characteristics in relation to depth when estimating GHG fluxes for tropical wetlands.

Water authorities responsible for water quantity and water quality management may strongly influence the magnitude of greenhouse gas emissions from the surface waters and the adjacent peat areas within their territories. Climate smart water management (reducing influx of organic matter and improving water quality) is therefore a potentially strong mitigation tool. We hypothesize that climate smart water management has a stronger mitigation potential than reducing emissions from the operational management of a Water Authority. Based on literature data on greenhouse gas emissions from ditches and agricultural peatlands, we present a case study of a Dutch Water Authority – Amstel, Gooi and Vecht (operated by Waternet). We estimate that greenhouse gas emissions from the 195 km2 large peat area within its territory are 470 kt CO2-eq per year. An additional 231 kt CO2-eq yr−1 is emitted from the water bodies within the 102 km2 large water area territory. Both emissions are considerably higher than the estimated climate footprint of the operational management of the water board (∼62 kt CO2-eq per year in 2017). While Waternet strives to have a net zero emission of greenhouse gases related to its operational management by 2020, we postulate that measures (to be taken before 2030) such as the prevention of organic matter and nutrients entering surface waters, the removal of organic carbon from ditches and higher groundwater levels in agricultural peatlands, may reduce greenhouse gas emissions in ditches and agricultural peat meadows with 26 and 27 kt CO2-eq per year, respectively. Measures that are taken to reduce greenhouse gas emissions in water bodies are expected to have a positive impact on water quality as well.

Increased periods of prolonged droughts followed by severe precipitation events are expected throughout South America due to climate change. Freshwater sediments are especially sensitive to these changing climate conditions. The increased oscillation of water levels in aquatic ecosystems causes enhanced cycles of sediment drying and rewetting. Here we experimentally evaluate the effects of induced drought followed by a rewetting event on the release of carbon dioxide (CO2), methane (CH4), nutrients (nitrogen and phosphorus), and trace elements (iron, manganese, and zinc) from the sediment of a tropical reservoir in southeastern Brazil. Furthermore, we used bulb onions (Allium cepa) to assess the potential cytogenotoxicity of the water overlying sediments after rewetting. We found peaks in CO2 and CH4 emissions when sediments first transitioned from wet to dry, with fluxes declining as sediments dried out. CO2 emissions peaked again upon rewetting, whereas CH4 emissions remained unaltered. Our experiment also revealed average increases by up to a factor of ~5000 in the release rates of nutrients and trace elements in water overlying sediments after rewetting. These increased release rates of potentially toxic compounds likely explain the lower replication of Allium cepa cells (up to 22% reduction) exposed to water overlying sediments after rewetting. Our findings suggest that increased events of drought followed by rewetting may lead to a range of changes in freshwater ecosystems, including nutrient enrichment, increased toxicity following resuspension of contaminants, and higher emission of greenhouse gases to the atmosphere.

While providing protein for a fast-growing human population, the ongoing boom in global aquaculture comes with environmental costs. Particularly, the intense greenhouse gas (GHG) emissions reported for several aquaculture systems are a source of concern. Still, we argue that actual emissions could be multiple times higher than currently thought. Most studies supporting existing estimates solely rely on measurements of water-atmosphere diffusive fluxes of GHG, whereas methane (CH4) and nitrous oxide (N2O) emissions during drainage and refilling and CH4 bubbles emerging from sediments are largely ignored. Yet, abundant evidence for similar aquatic ecosystems suggests that these largely unaccounted emission pathways may be responsible for a large share of annual GHG emissions. Uncertainties from overlooking important emission pathways may have serious consequences, including incorrect advice on mitigation strategies and overly optimistic assessments of the GHG footprint of cultured freshwater fish. To ensure a low-carbon future for global aquaculture, we contend that GHG assessments in fish-farming ponds must extend beyond the focus on diffusive water-atmosphere fluxes and include all emission pathways and possible carbon burial in the sediment. In parallel, we call for a better understanding of the biological, microbiological and physical drivers of aquaculture emissions to effectively support mitigation strategies to minimize the footprint of this nutritionally valuable protein source.

Many inland waters exhibit complete or partial desiccation, or have vanished due to global change, exposing sediments to the atmosphere. Yet, data on carbon dioxide (CO2) emissions from these sediments are too scarce to upscale emissions for global estimates or to understand their fundamental drivers. Here, we present the results of a global survey covering 196 dry inland waters across diverse ecosystem types and climate zones. We show that their CO2 emissions share fundamental drivers and constitute a substantial fraction of the carbon cycled by inland waters. CO2 emissions were consistent across ecosystem types and climate zones, with local characteristics explaining much of the variability. Accounting for such emissions increases global estimates of carbon emissions from inland waters by 6% (~0.12 Pg C y−1). Our results indicate that emissions from dry inland waters represent a significant and likely increasing component of the inland waters carbon cycle., Many inland waters seasonally or permanently dry up, thus exposing sediments to the atmosphere. Here the authors show that a substantial amount of CO2 is emitted from these dry sediments, increasing current inland water carbon flux estimates by 6%.

Documenting the patterns of biological diversity on Earth has always been a central challenge in macroecology and biogeography. However, we are only beginning to generate an understanding of the global patterns and determinants of macrophyte diversity. Here, we studied large-scale variation and community-environment relationships of lake macrophytes along climatic and geographical gradients using regional data from six continents. We applied statistical routines typically used in the context of metacommunity studies to provide novel insights into macrophyte community compositional patterns within regions worldwide. We found that lake macrophyte metacommunities followed clumped species replacement structures, suggesting that two or more species groups were responding similarly to the environment within regions. Underlying such general convergence, our results also provided evidence that community-environment relationships were largely context-dependent, stressing that no single mechanism is enough to account for the complex nature of compositional variation. Surprisingly, we found no general relationships between functional or phylogenetic composition and main metacommunity types, suggesting that linking multi-trait and evolutionary information to the elements of metacommunity structure is not straightforward. Our findings highlight that global conservation initiatives and biodiversity protection need to capture environmental variation at the metacommunity level, and acknowledge the highly context-dependent patterns in the community-environment relationships of lake macrophytes. Overall, we emphasize the need to embrace the potential complexity of ecological inferences in metacommunity organization across the globe.

Given the bioremediation potential of peat, natural capping of landfills in wetlands with a “peat cap” could provide a sustainable addition to regular capping methods using basal liners with limited life-spans and sand. It is unknown, however, which initial conditions optimise growth of this “peat cap” on top of a sand layer. Here, we tested the combined effects of topsoil addition (clay or organic soil) and vegetation type (Typha latifolia, T. angustifolia, Stratiotes aloides and submerged spp.) on net ecosystem C exchange and water quality in 18 sandy basins situated in a constructed wetland on top of a landfill. Although the highest net C sequestration rates occurred in Typha stands on sand, due to lower decomposition-related C losses as compared to clay and organic topsoils, vegetation development was slow and its cover was very low (15%) compared to clay (40%) and organic topsoils (70%). As this strongly impeded the build-up of a uniform peat layer, we conclude that, within a restricted time frame, the application of nutrient-rich topsoils is still necessary for sufficient biomass production to accumulate organic material. By recycling local soils, the accompanying initial C loss becomes negligible on a landscape scale.

Water hyacinth stands are known to affect both nutrient concentrations in the water and carbon exchange with the atmosphere. However, both enhanced and reduced greenhouse gas (GHG) emissions have been reported in relation to water hyacinth presence. This controversy may be explained by variation in plant density and rooting. High growth rates indicate its capacity to mobilize and store nutrients in the tissues, and assimilate large amounts of carbon dioxide (CO2). Simultaneously the plant can stimulate methane (CH4) emission. This may occur when plants are rooting in the sediment due to CH4 shuttling from the sediment, through the plant, into the atmosphere. To unravel the potential influences of water hyacinth on nutrient dynamics and GHG fluxes, we performed an experiment in which plant coverage and root access to the sediment were manipulated. Plants reduced phosphorus concentrations in water and pore-water, independent of coverage and rooting, also rooting plants grown at high coverage showed higher plant N:P ratios. CH4 emissions were highest at high coverage and were further increased by rooting, indicating that plant-mediated transport indeed takes place. However, the overall GHG budget in terms of CO2 equivalents still resulted in the water hyacinth vegetation being near neutral, or even a net sink with respect to GHG exchange. The plant-induced enhancement of CH4 emissions suggests that the plant can be an effective CO2-to-biomass-to-CH4 converter. Our results show that plant coverage and water depth – regulating sediment-root contact – should be taken into account when estimating water hyacinth’s effect on GHG emissions.

The Chinese mitten crab ( Eriocheir sinensis (H. Milne Edwards, 1854)), is a highly invasive species and poses a great threat to endemic species and infrastructure in Europe and North America. Although it is partly herbivorous and prefers to live in lakes with abundant submersed macrophytes, little is known about its effect on macrophytes. We used its native range, the mid-lower Yangtze Basin where the species has been cultured intensively for decades, as our study site to test the hypotheses that (1) high crab densities weaken the positive feedback between macrophytes and water transparency, and that (2) the effects of crabs become apparent only on decadal timescales and (3) are density dependent. We used correlative analyses based on 12 years of monitoring and multi-lake comparisons among 20 sub-areas in 4 lakes. High crab densities were found to cause negative effects on submersed macrophytes and transparency, and to weaken the positive relation between macrophytes and transparency. High densities of macrophytes showed resilience to disturbance from crabs. This resilience, however, reduced with continuous presence of high crab densities. Crab densities were strongly positively related with total phosphorus and negatively with transparency and total nitrogen. Phosphorus concentrations and transparency were not related with phytoplankton chlorophyll a , suggesting that crab’s bioturbation strongly influences water quality. The apparent resilience of the dense macrophyte stands should however, not delay attempts to eradicate the crab where it is invasive as this becomes more difficult once they have become established. When macrophyte abundance is already low at the time of invasion, immediate loss of macrophytes may occur.

Freshwater plants affect the ecosystem functioning of shallow aquatic ecosystems. However, because native plants are threatened by environmental change such as eutrophication, global warming and biological invasions, continued ecosystem functioning may be at risk. In this study, we explored how the growth of native and non-native plant species in eutrophic, warm conditions impacts two plant ecosystem functions: regulation of phytoplankton growth and methane emission. We expected that plants would inhibit phytoplankton growth, while for methane emission both inhibition and stimulation are possible. We conducted an outdoor experiment using monocultures of four native and four non-native freshwater plant species planted at three different densities, as well as a no-plant control. Monocultures of each species were planted in 65 L mesocosms and after three weeks of acclimatisation each mesocosm was inoculated with phytoplankton. Subsequently, we added nutrients twice a week for eight weeks, before harvesting the plant biomass. During these eight weeks, we measured chlorophyll-a concentration thirteen times and the diffusive methane emissions once after four weeks. The mesocosms amplified the temperature of a warm summer so that plants were exposed to higher-than-average temperatures. We found that five plant species lost biomass, two species increased their biomass only at the highest initial plant density (native Myriophyllum spicatum and non-native Lagarosiphon major) and a single species increased its biomass at all densities (on average 14 times its initial mass; amphibious non-native Myriophyllum aquaticum). Overall, the mean biomass change of non-natives was positive, whereas that of natives was negative. This difference in biomass change between native and non-native plants did not relate to overall differences in phytoplankton mass or diffusive methane emissions. In mesocosms where submerged plant species gained biomass, chlorophyll-a concentration was lower than in the noplant control and mesocosms with biomass loss. Diffusive methane emissions were highest in mesocosms where plants lost considerable biomass, likely because it increased substrate availability for methanogenesis. However, mesocosms where plant biomass increased had emissions similar to the no-plant control, hence we found no inhibitory effects of plant presence on diffusive methane emission. We conclude that plant growth in eutrophic, warm conditions varies strongly with plant identity. Our results furthermore suggest that plant identity determines whether the replacement of native by non-native freshwater plants will alter ecosystem functions such as regulation of phytoplankton growth and methane emission.

Methane (CH4) strongly contributes to observed global warming. As natural CH4 emissions mainly originate from wet ecosystems, it is important to unravel how climate change may affect these emissions. This is especially true for ebullition (bubble flux from sediments), a pathway that has long been underestimated but generally dominates emissions. Here we show a remarkably strong relationship between CH4 ebullition and temperature across a wide range of freshwater ecosystems on different continents using multi-seasonal CH4 ebullition data from the literature. As these temperature–ebullition relationships may have been affected by seasonal variation in organic matter availability, we also conducted a controlled year-round mesocosm experiment. Here 4 °C warming led to 51% higher total annual CH4 ebullition, while diffusion was not affected. Our combined findings suggest that global warming will strongly enhance freshwater CH4 emissions through a disproportional increase in ebullition (6–20% per 1 °C increase), contributing to global warming., The impacts of climate change on natural methane (CH4) emissions via ebullition are unclear. Here, using published and experimental multi-seasonal CH4 ebullition data, the authors find a strong relationship between CH4 ebullition and temperature across a wide range of freshwater ecosystems globally.

Small water systems are important hotspots of greenhouse gas (GHG) emission, but estimates are poorly constrained as data are scarce. Small ponds are often constructed in urban areas, where they receive large amounts of nutrients and therefore tend to be highly productive. Here, we investigated GHG emissions, seasonal and diel variation, and net ecosystem production (NEP) from an urban pond. In monthly 24‐h field campaigns during 11 months, diffusive water–atmosphere methane (CH4) and carbon dioxide (CO2) fluxes and CH4 ebullition and oxidation were quantified. With oxygen (O2) measurements, NEP was assessed. The pond was a net GHG source the entire year, with an emission of 3.4 kg CO2 eq m−2 yr−1. The dominant GHG emission pathway was CH4 ebullition (bubble flux, 50%), followed by diffusive emissions of CO2 (38%) and CH4 (12%). Sediment CH4 release was primarily driven by temperature and especially ebullition increased exponentially above a temperature threshold of 15°C. The pond's atmospheric CO2 exchange was not related to NEP or temperature but likely to a high allochthonous carbon (C) input via runoff and anaerobic mineralization of C. We expect urban ponds to show a large increase in GHG emission with increasing temperature, which should be considered carefully when constructing ponds in urban areas. Emissions may partly be counteracted by pond management focusing on a reduction of nutrient and organic matter input. publishedVersion

Global warming may intensify eutrophication of shallow lakes by affecting nutrient loading, evaporation rates, and water level and thus produce major changes in food webs. We investigated to what degree food webs in tropical humid lakes differed from those in more eutrophic semi-arid lakes of the same latitude. Our results indicate that the catchment area-to-lake area ratio, nutrients, chlorophyll a, suspended solids, abundances of phytoplankton, zooplankton, and omnivorous fish as well as total fish catch per unit effort were all higher in the semi-arid lakes, whereas inlet water-to-evaporation ratio (proxy for water balance), water transparency, percentage macrophytes cover, and the piscivores:omnivores ratio were higher in the humid lakes. Our results suggest that reduced inlet water-to-evaporation ratio will increase lake eutrophication, which, in turn, as in temperate regions, will alter trophic structure of the freshwater community.

Este artículo contiene 16 páginas, 6 figuras, 3 tablas., 1. Pigments in lake surface sediments integrate both benthic and pelagic primary producer composition at the whole‐lake ecosystem level. 2. We gathered a comprehensive set of water chemistry, morphometric, physical and biological lake variables, catchment and climate characteristics, and geographical descriptors. We used multiple regressions to relate whole‐lake algal pigment concentration to environmental conditions and multivariate statistical analyses to assess the factors most associated with photoautotrophic algal and bacterial community composition. The relative influence of environmental factors and spatial distribution was assessed by variance partitioning analysis among three groups of variables: (1) in‐lake factors, (2) external factors, and (3) geographic descriptors. 3. Pigment concentration and community composition were most sensitive to in‐lake factors. Pigment‐inferred abundance of algae, including cyanobacteria, tended to be highest in shallower systems with high nutrient concentrations, independent of the latitudinal temperature or irradiance gradients. Pigment‐inferred community composition was best explained by nutrients and biotic composition (zooplankton and fish communities). Only in maritime temperate lakes did a link with regional location occur due to their low dissolved inorganic nitrogen to soluble reactive phosphorus ratios (1.5 atomic ratio), suggesting nitrogen limitation of phytoplankton growth; accordingly, the sediment pigments revealed cyanobacteria to be the dominant group, although this may also be a consequence of the overall high nutrient levels in these 4. Despite the large climate gradient covered, in‐lake rather than external factors were associated with the patterns observed in pigment concentration (from benthic and pelagic microorganisms) and inferred composition and abundance in these shallow lakes. Our results suggest that pigment assemblages in sediments, which integrate both benthic and pelagic microbial photoautotrophic community and processes, are valuable indicators of changes in shallow (0.75–12 m depth) lake ecosystems., This research was funded by a post‐doctoral Beatriu de Pinós grant from the Departament d'Universitats, Recerca i Societat de la Informació, Generalitat de Catalunya (T.B.). Further support came from The Netherlands Organization for Scientific Research (NWO) grant W84‐549 and WB84‐586, The National Geographic Society grant 7864‐5; in Brazil by Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) grants 480122, 490409, 311427; in Uruguay by PEDECIBA, Maestría en Ciencias Ambientales, Donación Aguas de la Costa S.A., and Banco de Seguros del Estado. N.M. was supported by Sistema Nacional de Investigadores. E.J. was supported by the MARS project (Managing Aquatic ecosystems and water Resources under multiple Stress) funded under the 7th EU Framework Programme, Theme 6 (Environment including Climate Change) and AU Centre for Water Technology (watec.au.dk).

Data on salinity tolerance of aquatic plant species are scarce, but required to better understand species’ responses in multiple stressed environments. We analyzed data from a Dutch Water board in the province of Zeeland according to the occurrence of plant taxa in relation to salinity (chloride concentration). The dataset contained 862 samples of plants (altogether 46 taxa) and chloride concentrations. The smallest range was found for Nuphar lutea occurring in sites with 43 to 140 mg l−1 Cl−. The widest range was observed for Glaux maritima occurring in sites with 710 to 22,000 mg l−1 Cl−. Two species (N. lutea and Potamogeton trichoides) had an optimum lower than 100 mg l−1 Cl−, while three taxa (G. maritima, Salicornia spp. and Ulva spp. (=non-filamentous)) had an optimum higher than 10,000 mg l−1 Cl−. Change points (CPs) were determined on salinity class level along the gradient. These CPs are defined as the class, at which the largest change in occurrence is determined. The CP of taxa that are relatively sensitive, such as Sparganium erectum and Carex riparia, were below 200 mg l−1 Cl−, while relative tolerant taxa, such as Stuckenia pectinata and Ranunculus sceleratus, had CPs at concentrations that were more than tenfold higher. The upper limit of the salinity range at which taxa occurred in the study area were generally similar to the few limits that were previously published. Implications for assigning species to water body types for implementing the Water Framework Directive in the Netherlands are discussed.

Hydroelectric reservoirs bury significant amounts of organic carbon (OC) in their sediments. Many reservoirs are characterized by high sedimentation rates, low oxygen concentrations in bottom water and a high share of terrestrially derived OC, and all of these factors have been linked to a high efficiency of OC burial. However, investigations of OC burial efficiency (OCBE, i.e., the ratio between buried and deposited OC) in reservoirs are limited to a few studies, none of which include spatially resolved analyses. In this study we determined the spatial variation in OCBE in a large subtropical reservoir and related it to sediment characteristics. Our results show that the sediment accumulation rate explains up to 92 % of the spatial variability in OCBE, outweighing the effect of other variables, such as OC source and oxygen exposure time. OCBE at the pelagic sites varied from 48 to 86 % (mean 67 %) and decreased towards the dam. At the margins, OCBE was lower (9–17 %) due to the low sediment accumulation in shallow areas. Our data show that the variability in OCBE both along the rivers–dam and the margin–pelagic axes must be considered in whole-reservoir assessments. Combining these results with a spatially resolved assessment of sediment accumulation and OC burial in the studied reservoir, we estimated a spatially resolved mean OC burial efficiency of 57 %. Being the first assessment of OCBE with such a high spatial resolution in a reservoir, these results suggest that reservoirs may bury OC more efficiently than natural lakes.

Shallow lakes are important stocks of carbon (C), nitrogen (N), and phosphorus (P), yet little is known about the influence of alternative primary producer dominance on C stocks or the impact of different macrophyte species on the role of shallow lakes as elemental stocks. We used Yangtze shallow lakes dominated by a monsoon climate as a research site to test the hypothesis that changes in elemental stocks in the water column and sediment after a shift to a phytoplankton-dominated state depend on the macrophyte species originally present. We used a dual approach, combining multi-year monitoring and multi-lake comparisons of lakes that were, at least once, dominated either by fast-decomposing Potamogeton crispus or slow-decomposing P. maackianus . Elemental concentrations generally decreased in the water column and increased in sediment after a shift from P. maackianus presence to absence. Only a minor reallocation of elemental stocks was found in lakes where P. crispus disappeared. This difference is likely caused by a combination of the different biomass and decomposition rates between species, further illustrated by the amount of dead plant material in the sediment after loss of plants. After P. maackianus loss, plant material was found in the sediment in high amounts for up to 6 years, whereas after P. crispus loss the coarse material was absent in

Worldwide the area of free-floating plants is increasing, which can be expected to alter methane (CH4) emissions from aquatic systems in several ways. A large proportion of the CH4 produced may become oxidized below the plants due to the accumulation of CH4 as a result of a decrease in the diffusive water-atmosphere flux and the entrapment of part of the ebullitive CH4, in combination with suitable conditions for methane oxidizing (MOX) bacteria in the aerobic rhizosphere. We used a set of essays to test this hypothesis and to explore the effect of different densities for three widespread free-floating species: Azolla filiculoides, Salvinia natans, and Eichhornia crassipes. The gas exchange velocity, proportion of CH4 bubbles trapped by the plants, occurrence of radial oxygen loss from roots, and MOX rates on the roots were assessed. We subsequently used the outcome of these experiments to parameterize a simple model. With this model we estimated the proportion of the produced CH4 that is oxidized, for different plant species and different densities. We found that in a shallow (1 m) system up to 70% of the CH4 produced may become oxidized as a result of a strong decrease in gas exchange combined with high MOX activity of the rhizosphere microbiome. As floating plants also are likely to increase CH4 production by organic matter production, especially when their presence induces anaerobic conditions, the overall effect on CH4 emission will strongly depend on local conditions. This explains the contrasting effects of floating plants on CH4 emissions in literature as reviewed here. As the effect of floating plants on CH4 emissions, including the high MOX rates we show here, can be substantial, there is an urgent need to consider this impact when assessing greenhouse gas budgets.