38 results on '"Santesteban, Luis Gonzaga"'
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2. Upgrading and validating a soil water balance model to predict stem water potential in vineyards
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Mirás-Avalos, José M., Escalona, José M., Pérez-Álvarez, Eva Pilar, Romero, Pascual, Botia, Pablo, Navarro, Josefa, Torres, Nazareth, Santesteban, Luis Gonzaga, Uriarte, David, Intrigliolo, Diego S., and Buesa, I.
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- 2024
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3. Dynamics of GFLV, GFkV, GLRaV-1, and GLRaV -3 grapevine viruses transport toward developing tissues
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Crespo-Martínez, Sara, Ramírez-Lacunza, Asier, Miranda, Carlos, Urrestarazu, Jorge, and Santesteban, Luis Gonzaga
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- 2023
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4. Timing of defoliation affects anthocyanin and sugar decoupling in Grenache variety growing in warm seasons
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Fernández-Zurbano, Purificación, Santesteban, Luis Gonzaga, Villa-Llop, Ana, Loidi, Maite, Peñalosa, Carlos, Musquiz, Sergio, and Torres, Nazareth
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- 2024
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5. Agronomic evaluation of eight 41 B × 110 richter grapevine genotypes as rootstock candidates for mediterranean viticulture
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Marín, Diana, Miranda, Carlos, Abad, Francisco Javier, Urrestarazu, Jorge, Mayor, Blanca, Villa-Llop, Ana, and Santesteban, Luis Gonzaga
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- 2023
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6. Nitrogen isotope ratio (δ15N): a nearly unexplored indicator that provides useful information in viticulture
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Santesteban, Luis Gonzaga, primary, Loidi, Maite, additional, Urretavizcaya, Inés, additional, Galar, Mónica, additional, Crespo-Martínez, Sara, additional, Royo, José Bernardo, additional, and Miranda, Carlos, additional
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- 2024
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7. fruclimadapt: An R package for climate adaptation assessment of temperate fruit species
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Miranda, Carlos, Urrestarazu, Jorge, and Santesteban, Luis Gonzaga
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- 2021
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8. Respectful Pruning Improves Grapevine Development: A Case Study in Young Vineyards.
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Galar-Martínez, Mónica, Torres, Nazareth, Sebastián, Bárbara, Palacios, Julián, Arzoz, Ignacio, Juanena, Nahiara, Villa-Llop, Ana, Loidi, Maite, Dewasme, Coralie, Roby, Jean Phillippe, Santesteban, Luis Gonzaga, and Centinari, Michela
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FRUIT quality ,PLANT health ,GRAPES ,CROPS ,CLIMBING plants ,VINEYARDS - Abstract
Grapevine pruning is an agronomical operation required to regulate growth and yield, improve fruit quality, and maintain plant health and vigour. However, the intensification of the crop in the last decades, driven by efforts to increase productivity and decrease costs, has led to reduced attention to this operation. The aim of this study was to investigate whether different pruning styles during the first years of vineyard training affect grapevine development. Three pruning styles were followed in a newly planted cv. "Tempranillo" vineyard for four consecutive pruning seasons: (i) respectful (RESP), where pruning cuts were always made leaving protection wood between the cut and vine perennial structures, and the preferential sap flow path was chosen; (ii) aggressive (AGGR), where no protection wood was left and, when possible, the nonpreferential sap flow path was followed; and (iii) winegrape grower (WIN), where the common practices used in the area were followed, which corresponds to an intermediate style between RESP and AGGR. In general, the RESP style increased the vegetative development compared to WIN and AGGR styles over the years and produced a higher yield in the first production year, although the intensity of the effect was not the same in the two vineyards considered. This was the first effort to systematically assess the effects of respectful pruning techniques on vine vegetative growth and demonstrate scientifically its impact. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Phenotyping xylem connections in grafted plants using X‐ray micro‐computed tomography.
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Camboué, Marilou, Janoueix, Anne, Tandonnet, Jean‐Pascal, Spilmont, Anne‐Sophie, Moisy, Cédric, Mathieu, Guillaume, Cordelières, Fabrice, Teillon, Jérémie, Santesteban, Luis Gonzaga, Ollat, Nathalie, and Cookson, Sarah Jane
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XYLEM ,TOMOGRAPHY ,CONTRAST media ,IMAGE analysis ,PLANT roots - Abstract
Plants are able to naturally graft or inosculate their trunks, branches and roots together, this mechanism is used by humans to graft together different genotypes for a range of purposes. Grafts are considered successful if functional vascular connections between the two genotypes occur. Various techniques can evaluate xylem connections across the graft interface. However, these methods are generally unable to assess the heterogeneity and three‐dimensional (3D) structure of xylem vessel connections. Here we present the use of X‐ray micro‐computed tomography to characterize the 3D morphology of grafts of grapevine. We show that xylem vessels form between the two plants of natural root and human‐made stem grafts. The main novelty of this methodology is that we were able to visualize the 3D network of functional xylem vessels connecting the scion and rootstock in human‐made stem grafts thanks to the addition of a contrast agent to the roots and improved image analysis pipelines. In addition, we reveal the presence of extensive diagonal xylem connections between the main axial xylem vessels in 2‐year old grapevine stems. In conclusion, we present a method that has the potential to provide new insights into the structure and function of xylem vessels in large tissue samples. Summary statement: Successful grafting requires the formation of functional vascular connections between two different plants. We describe using X‐ray micro‐computed tomography to characterize the network of xylem vessels formed across the graft interface of natural root and human‐made stem grafts of grapevine. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Evaluating treatments for the protection of grapevine pruning wounds from natural infection by trunk disease fungi
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Leal, Catarina, primary, Bujanda, Rebeca, additional, Manzanares, Beatriz Lopez, additional, Ojeda, Sonia, additional, Berbegal, Monica, additional, Llop, Ana Villa, additional, Santesteban, Luis Gonzaga, additional, Palacios, Julian, additional, and Gramaje, David, additional
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- 2024
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11. Structural and Spatial Shifts in the Viticulture Potential of Main European Wine Regions as an Effect of Climate Change.
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Irimia, Liviu Mihai, Patriche, Cristian Valeriu, Petitjean, Théo, Tissot, Cyril, Santesteban, Luis Gonzaga, Neethling, Etienne, Foss, Chris, Le Roux, Renan, and Quénol, Hervé
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VITICULTURE ,WINE districts ,SYRAH ,RED wines ,CLIMATE change ,BORDEAUX wines ,CABERNET wines ,GRAPES - Abstract
Climate change modifies the base climate of the wine regions and, with it, the structure of their traditional types of wine production, imposing measures to adapt, mitigate, or capitalize on the newly emerging conditions. In order to assess the impact of climate change and establish the appropriate adaptation measures for each wine region, regional and local studies are needed, which allow knowledge of their current climate profile. The aim of this research was to identify the changes that appeared as an effect of climate change in the initial climate profile and the initial structure of the traditional types of wine production of Bordeaux (France), Loire Valley (France), Rhine-Main-Nahe (Germany), La Rioja (Spain) and Cotnari (Romania) wine regions, and also in climate suitability for wine production of the Sussex area from the UK. The study uses multi-year averages for the 1951–1990 and 1991–2010 time periods of reference bioclimatic indices for viticulture, namely the Average Temperature of the Growing Season (AvGST), the Huglin Index (HI), and the Oenoclimatic Aptitude Index (IAOe). The results of this research reveal significant changes in climate suitability for wine production of the studied wine regions: in the Bordeaux wine region, climate change led to the appearance of conditions for the cultivation of the Mediterranean climate varieties Grenache, Syrah, and Carignan; in the cool climate wine regions Rhine-Main-Nahe and Cotnari, traditional producers of white wines, the climate has also become suitable for the cultivation of Pinot noir and Cabernet franc varieties, and implicitly for the production of red wines; in all studied wine regions, the classes of climate suitability for viticulture shifted higher in altitude, as is the case of the La Rioja region, where, in the recent period, the grapevine can be grown up to 922.9 m asl, higher by 206.2 m compared to the 1951–1990 time period; in the low area of each wine region, one or even two new climate suitability classes for wine grape growing appeared. The shifts revealed by this research generate solid conclusions regarding the effect of climatic change on the viticultural potential of geographical areas, namely: in the context of climate change, the altitude of the wine region has a major influence on the evolution of the local viticulture potential; a higher topography allows a better adaptation of the wine region to climate change; low-elevation wine regions are more vulnerable to climate changes, especially the further south they are located; as an effect of climate change, conditions appear in the wine regions for the cultivation of new grapevine varieties and the production of new types of wine. [ABSTRACT FROM AUTHOR]
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- 2024
- Full Text
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12. The role of rootstocks for grape growing adaptation to climate change. Meta-analysis of the research conducted in Spanish viticulture
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Santesteban, Luis Gonzaga, primary, Rekarte, Isabel, additional, Torres, Nazareth, additional, Galar, Mónica, additional, Villa-Llop, Ana, additional, Visconti, Fernando, additional, Intrigliolo, Diego S., additional, Escalona, José M., additional, De Herralde, Felicidad, additional, and Miranda, Carlos, additional
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- 2023
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13. Direct and indirect effects of three virus infections on yield and berry composition in grapevine (Vitis vinifera L.) cv. ‘Tempranillo’
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Martínez, Lidia, Miranda, Carlos, Royo, José Bernardo, Urrestarazu, Jorge, Martínez de Toda, Fernando, Balda, Pedro, and Santesteban, Luis Gonzaga
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- 2016
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14. Cover crops under the vines: a viable alternative for weed management in Mediterranean vineyards
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Abad, Javier, primary, Marín, Diana, additional, Cibriaín, Jose Felix, additional, Sagüés, Ana, additional, and Santesteban, Luis Gonzaga, additional
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- 2022
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15. Effects of graft quality on growth and grapevine-water relations
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Marín, Diana, Torres, Nazareth, Dayer, Silvina, Villa-Llop, Ana, Abad, Francisco Javier, Gambetta, Gregory A., Torres Ruiz, Jose Manuel, Santesteban, Luis Gonzaga, Instituto de Ciencias de la Vid y el Vino (ICVV), Universidad de La Rioja (UR)-Consejo Superior de Investigaciones Científicas [Spain] (CSIC), INTA EEA Mendoza, Ecophysiologie et Génomique Fonctionnelle de la Vigne (UMR EGFV), Institut National de la Recherche Agronomique (INRA)-Université de Bordeaux (UB)-Institut des Sciences de la Vigne et du Vin (ISVV)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro), Laboratoire de Physique et Physiologie Intégratives de l’Arbre en environnement Fluctuant (PIAF), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Clermont Auvergne (UCA), and Torres Ruiz, José M.
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[SDE.BE] Environmental Sciences/Biodiversity and Ecology ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
International audience
- Published
- 2022
16. Análisis de la expresión génica de cinco enzimas involucradas en el pardeamiento del fruto tras el corte en manzano
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Bielsa González, Francisco Javier, Irisarri Sarto, Patricia, Urrestarazu Vidart, Jorge, Errea Abad, María Pilar, Miranda, Carlos, Santesteban, Luis Gonzaga, and Pina Sobrino, Ana
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Pardeamiento enzimático ,Malus doméstica ,Expresión génica - Abstract
Esta investigación es parte del proyecto de I+D+i PID2019-108081, financiado por MCIN/ AEI /10.13039/501100011033 y el grupo consolidado de investigación A12 del Gobierno de Aragón Published
- Published
- 2022
17. Grape Cluster Detection Using UAV Photogrammetric Point Clouds as a Low-Cost Tool for Yield Forecasting in Vineyards
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Agencia Estatal de Investigación (España), European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Nafarroako Gobernua, Consejo Superior de Investigaciones Científicas (España), Torres-Sánchez, Jorge, Mesas-Carrascosa, Francisco Javier, Santesteban, Luis Gonzaga, Jiménez-Brenes, Francisco Manuel, Oneka, Oihane, Villa-Llop, Ana, Loidi, Maite, López Granados, Francisca, Agencia Estatal de Investigación (España), European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Nafarroako Gobernua, Consejo Superior de Investigaciones Científicas (España), Torres-Sánchez, Jorge, Mesas-Carrascosa, Francisco Javier, Santesteban, Luis Gonzaga, Jiménez-Brenes, Francisco Manuel, Oneka, Oihane, Villa-Llop, Ana, Loidi, Maite, and López Granados, Francisca
- Abstract
Yield prediction is crucial for the management of harvest and scheduling wine production operations. Traditional yield prediction methods rely on manual sampling and are time-consuming, making it difficult to handle the intrinsic spatial variability of vineyards. There have been significant advances in automatic yield estimation in vineyards from on-ground imagery, but terrestrial platforms have some limitations since they can cause soil compaction and have problems on sloping and ploughed land. The analysis of photogrammetric point clouds generated with unmanned aerial vehicles (UAV) imagery has shown its potential in the characterization of woody crops, and the point color analysis has been used for the detection of flowers in almond trees. For these reasons, the main objective of this work was to develop an unsupervised and automated workflow for detection of grape clusters in red grapevine varieties using UAV photogrammetric point clouds and color indices. As leaf occlusion is recognized as a major challenge in fruit detection, the influence of partial leaf removal in the accuracy of the workflow was assessed. UAV flights were performed over two commercial vineyards with different grape varieties in 2019 and 2020, and the photogrammetric point clouds generated from these flights were analyzed using an automatic and unsupervised algorithm developed using free software. The proposed methodology achieved R2 values higher than 0.75 between the harvest weight and the projected area of the points classified as grapes in vines when partial two-sided removal treatment, and an R2 of 0.82 was achieved in one of the datasets for vines with untouched full canopy. The accuracy achieved in grape detection opens the door to yield prediction in red grape vineyards. This would allow the creation of yield estimation maps that will ease the implementation of precision viticulture practices. To the authors’ knowledge, this is the first time that UAV photogrammetric point clouds hav
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- 2021
18. Challenges of viticulture adaptation to global change: tackling the issue from the roots
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Agencia Estatal de Investigación (España), Ministerio de Ciencia e Innovación (España), Universidad de Navarra, Mirás‐Avalos, José Manuel [0000-0003-4745-5929], Marín, D., Armengol, Josep, Carbonell-Bejerano, Pablo, Escalona, José Mariano, Gramaje, David, Hernández‐Montes, E., Intrigliolo, Diego S., Martínez-Zapater, José M., Medrano, H., Mirás-Avalos, José Manuel, Palomares Rius, Juan E., Romero‐Azorín, P., Savé, R., Santesteban, Luis Gonzaga, Herralde, F. de, Agencia Estatal de Investigación (España), Ministerio de Ciencia e Innovación (España), Universidad de Navarra, Mirás‐Avalos, José Manuel [0000-0003-4745-5929], Marín, D., Armengol, Josep, Carbonell-Bejerano, Pablo, Escalona, José Mariano, Gramaje, David, Hernández‐Montes, E., Intrigliolo, Diego S., Martínez-Zapater, José M., Medrano, H., Mirás-Avalos, José Manuel, Palomares Rius, Juan E., Romero‐Azorín, P., Savé, R., Santesteban, Luis Gonzaga, and Herralde, F. de
- Abstract
Viticulture is facing emerging challenges not only because of the effect of climate change on yield and composition of grapes, but also of a social demand for environmental‐friendly agricultural management. Adaptation to these challenges is essential to guarantee the sustainability of viticulture. The aim of this review is to present adaptation possibilities from the soil‐hidden, and often disregarded, part of the grapevine, the roots. The complexity of soil–root interactions makes necessary a comprehensive approach taking into account physiology, pathology and genetics, in order to outline strategies to improve viticulture adaptation to current and future threats. Rootstocks are the link between soil and scion in grafted crops, and they have played an essential role in viticulture since the introduction of phylloxera into Europe at the end of the 19th century. This review outlines current and future challenges that are threatening the sustainability of the wine sector and the relevant role that rootstocks can play to face these threats. We describe how rootstocks along with soil management can be exploited as an essential tool to deal with the effects of climate change and of emerging soil‐borne pests and pathogens. Moreover, we discuss the possibilities and limitations of diverse genetic strategies for rootstock breeding.
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- 2021
19. Grape Cluster Detection Using UAV Photogrammetric Point Clouds as a Low-Cost Tool for Yield Forecasting in Vineyards
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Torres-Sánchez, Jorge, primary, Mesas-Carrascosa, Francisco Javier, additional, Santesteban, Luis-Gonzaga, additional, Jiménez-Brenes, Francisco Manuel, additional, Oneka, Oihane, additional, Villa-Llop, Ana, additional, Loidi, Maite, additional, and López-Granados, Francisca, additional
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- 2021
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20. Cover crops in viticulture. A systematic review (2):Implications on vineyard agronomic performance
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Abad, Javier, primary, Hermoso de Mendoza, Irantzu, additional, Marín, Diana, additional, Orcaray, Luis, additional, and Santesteban, Luis Gonzaga, additional
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- 2021
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21. Monitoring Vineyard Canopy Management Operations Using UAV-Acquired Photogrammetric Point Clouds
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Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Nafarroako Gobernua, Consejo Superior de Investigaciones Científicas (España), Universidad Pública de Navarra, CSIC - Unidad de Recursos de Información Científica para la Investigación (URICI), López Granados, Francisca, Torres-Sánchez, Jorge, Jiménez-Brenes, Francisco Manuel, Oneka, Oihane, Marín, Diana, Loidi, Maite, Castro, Ana Isabel de, Santesteban, Luis Gonzaga, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Nafarroako Gobernua, Consejo Superior de Investigaciones Científicas (España), Universidad Pública de Navarra, CSIC - Unidad de Recursos de Información Científica para la Investigación (URICI), López Granados, Francisca, Torres-Sánchez, Jorge, Jiménez-Brenes, Francisco Manuel, Oneka, Oihane, Marín, Diana, Loidi, Maite, Castro, Ana Isabel de, and Santesteban, Luis Gonzaga
- Abstract
Canopy management operations, such as shoot thinning, leaf removal, and shoot trimming, are among the most relevant agricultural practices in viticulture. However, the supervision of these tasks demands a visual inspection of the whole vineyard, which is time-consuming and laborious. The application of photogrammetric techniques to images acquired with an Unmanned Aerial Vehicle (UAV) has proved to be an efficient way to measure woody crops canopy. Consequently, the objective of this work was to determine whether the use of UAV photogrammetry allows the detection of canopy management operations. A UAV equipped with an RGB digital camera was used to acquire images with high overlap over different canopy management experiments in four vineyards with the aim of characterizing vine dimensions before and after shoot thinning, leaf removal, and shoot trimming operations. The images were processed to generate photogrammetric point clouds of every vine that were analyzed using a fully automated object-based image analysis algorithm. Two approaches were tested in the analysis of the UAV derived data: (1) to determine whether the comparison of the vine dimensions before and after the treatments allowed the detection of the canopy management operations; and (2) to study the vine dimensions after the operations and assess the possibility of detecting these operations using only the data from the flight after them. The first approach successfully detected the canopy management. Regarding the second approach, significant differences in the vine dimensions after the treatments were detected in all the experiments, and the vines under the shoot trimming treatment could be easily and accurately detected based on a fixed threshold.
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- 2020
22. Cover crops in viticulture. A systematic review (1): Implications on soil characteristics and biodiversity in vineyard
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Abad, Javier, primary, Hermoso de Mendoza, Iranzu, additional, Marín, Diana, additional, Orcaray, Luis, additional, and Santesteban, Luis Gonzaga, additional
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- 2021
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23. Strategies for adapting vineyards to a changing climate. (Re)-Learning from Mediterranean viticulture
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Santesteban, Luis Gonzaga, primary
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- 2020
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24. Definición del núcleo optimizado de la colección de conservación del manzano español
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Miranda, Carlos, Errea Abad, María Pilar, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Pereira-Lorenzo, Santiago, Dapena, E., Urbina, Valero, Moreno Sánchez, María Ángeles, Díaz Hernández, M.B., Ramos-Cabrer, Ana María, Ascasíbar-Errasti, J, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Dalmases, J., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Royo, José Bernardo, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Moreno Sánchez, María Ángeles [0000-0002-6177-4638], Reig Córdoba, Gemma [0000-0002-6573-3104], Moreno Sánchez, María Ángeles, and Reig Córdoba, Gemma
- Subjects
optimización ,marcadores moleculares ,colección nuclear ,microsatélites ,Malus x domestica Borkh - Abstract
5 Pags.- 1 Tabl., Este trabajo tiene como objetivo determinar la estrategia más adecuada para la selección del conjunto mínimo de accesiones (núcleo optimizado) que represente eficientemente la variación genética del manzano conservado en las colecciones españolas. Este núcleo optimizado mediante criterios genéticos constituirá la base de la colección nuclear de conservación, que podrá ser complementado con accesiones seleccionadas por otros criterios (morfo-fisiológicos, agronómicos, valor histórico, etc.). Se ha evaluado la eficiencia de estrategias de selección por búsqueda local estocástica avanzada (ASLS) que diferían tanto por el tamaño final del núcleo como por la combinación (y peso relativo) de las medidas de distancia genética y riqueza alélica a optimizar. Las estrategias empleadas han proporcionado núcleos optimizados con grandes diferencias en la diversidad conservada, así como en el nivel de representación de la estructura genética general. Teniendo en cuenta el uso principal de la colección nuclear, la estrategia que ofrece un mejor equilibrio entre representatividad y adecuación al uso es la que combina la optimización de la distancia media entre cada accesión de la colección y la entrada en el núcleo más cercana con el índice de Shannon y la recuperación de alelos., Este trabajo ha sido financiado por los proyectos INIA RF2011-00017-C05-00 y RTA2015-00052-C02-00
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- 2018
25. Water Content Continuous Monitoring of Grapevine Xylem Tissue Using a Portable Low-Power Cost-Effective FMCW Radar
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Mayoral, Carlos Quemada, primary, Garcia Gonzalez, Cebrian, additional, Galarregui, Juan Carlos Iriarte, additional, Marin, Diana, additional, Gaston, Diego, additional, Miranda, Carlos, additional, Gonzalo, Ramon, additional, Maestrojuan, Itziar, additional, Santesteban, Luis Gonzaga, additional, and Ederra, Inigo, additional
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- 2019
- Full Text
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26. Evaluation of the incidence of severe trimming on grapevine (Vitis vinifera L.) water consumption
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Abad, Francisco Javier, primary, Marín, Diana, additional, Loidi, Maite, additional, Miranda, Carlos, additional, Royo, José Bernardo, additional, Urrestarazu, Jorge, additional, and Santesteban, Luis Gonzaga, additional
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- 2019
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27. Definición del núcleo optimizado de la colección de conservación del manzano español
- Author
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CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Moreno Sánchez, María Ángeles [0000-0002-6177-4638], Reig Córdoba, Gemma [0000-0002-6573-3104], Miranda, Carlos, Errea Abad, María Pilar, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Pereira-Lorenzo, Santiago, Dapena, E., Urbina, Valero, Moreno Sánchez, María Ángeles, Díaz Hernández, M.B., Ramos-Cabrer, Ana María, Ascasíbar-Errasti, J, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Dalmases, J., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Royo, José Bernardo, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Moreno Sánchez, María Ángeles [0000-0002-6177-4638], Reig Córdoba, Gemma [0000-0002-6573-3104], Miranda, Carlos, Errea Abad, María Pilar, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Pereira-Lorenzo, Santiago, Dapena, E., Urbina, Valero, Moreno Sánchez, María Ángeles, Díaz Hernández, M.B., Ramos-Cabrer, Ana María, Ascasíbar-Errasti, J, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Dalmases, J., Santesteban, Luis Gonzaga, Laquidain, María Jesús, and Royo, José Bernardo
- Abstract
Este trabajo tiene como objetivo determinar la estrategia más adecuada para la selección del conjunto mínimo de accesiones (núcleo optimizado) que represente eficientemente la variación genética del manzano conservado en las colecciones españolas. Este núcleo optimizado mediante criterios genéticos constituirá la base de la colección nuclear de conservación, que podrá ser complementado con accesiones seleccionadas por otros criterios (morfo-fisiológicos, agronómicos, valor histórico, etc.). Se ha evaluado la eficiencia de estrategias de selección por búsqueda local estocástica avanzada (ASLS) que diferían tanto por el tamaño final del núcleo como por la combinación (y peso relativo) de las medidas de distancia genética y riqueza alélica a optimizar. Las estrategias empleadas han proporcionado núcleos optimizados con grandes diferencias en la diversidad conservada, así como en el nivel de representación de la estructura genética general. Teniendo en cuenta el uso principal de la colección nuclear, la estrategia que ofrece un mejor equilibrio entre representatividad y adecuación al uso es la que combina la optimización de la distancia media entre cada accesión de la colección y la entrada en el núcleo más cercana con el índice de Shannon y la recuperación de alelos.
- Published
- 2018
28. Analysis of the genetic diversity and structure of the Spanish apple genetic resources suggests the existence of an Iberian genepool
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Pereira-Lorenzo, J., Urrestarazu Vidart, Jorge, Ramos-Cabrer, Ana María, Miranda, Carlos, Pina Sobrino, Ana, Dapena, E., Moreno Sánchez, María Ángeles, Errea, Pilar, Llamero, N., Díaz-Hernández, M. B., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Gogorcena Aoiz, Yolanda, Urbina, Valero, Dalmases, Josep, Ascasíbar-Errasti, J, Royo, José Bernardo, and CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)
- Subjects
SSR markers ,Malus × domestica Borkh ,variability ,differentiation ,Population structure - Abstract
87 Pags.- 3 Tabls.- 5 Figs.- 1 Suppl. Fig.- 5 Suppl. Tabls. The definitive version is available at: http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1744-7348, The nature and structure of genetic diversity in the Spanish apple germplasm preserved at the national level was widely unknown, since studies performed to date on this topic have been exclusively carried out at the regional scale. Here, 1453 accessions from Spanish collections of Malus × domestica were evaluated with a common set of 13 SSR (Simple Sequence Repeats) markers in order to estimate genetic diversity, to identify the underlying genetic structure and to unravel the relationships among them and among a wide set of international cultivars for reference. In total, 737 unique genotypes were identified, 581 diploids and 156 triploids. Using a model-based Bayesian clustering procedure, two reconstructed populations were obtained for diploid genotypes; one retaining only Spanish cultivars (42% of genotypes), and a second containing all foreign cultivars the latter exhibiting evidence supporting the existence of a secondary sub-structure. Similarly, analysis performed on the 156 triploid genotypes also revealed two reconstructed populations; one exclusively associated with local Spanish genotypes (44%). The Jaccard coefficient allowed clustering by UPGMA (Unweighted Pair Group Method) diploid and triploid genotypes, and remarkable differences in allelic composition among the different partitioning levels were found. AMOVA analyses showed moderate but significant differentiation among the main groups (0.08 ≤ FST ≤ 0.12). Our results highlight an important fraction of the Spanish apple germplasm that constitutes a differentiated genepool with respect to the international and commercial apple cultivars. Moreover, the extent of the Spanish genetic diversity was spatially distributed along the northern Iberian Peninsula, suggesting an extensive migration of genotypes along the country. This study is the first valuable action for genetic conservation of apple at the national scale, and constitutes a decisive step towards the definition of a Spanish core collection that will be useful for further studies in dissecting the genetic control of important horticultural traits through genome-wide association analysis in apple., This work was supported by INIA (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), under the Project: 'Harmonization of the methodology of characterization, assessment of genetic diversity and definition of the core collection of the apple germplasm conserved in Spanish genebanks (ref. RF2011-00017-C05)'.
- Published
- 2017
29. Analysis of the genetic diversity and structure of the Spanish apple genetic resources suggests the existence of an Iberian genepool
- Author
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CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Pereira-Lorenzo, J., Urrestarazu Vidart, Jorge, Ramos-Cabrer, Ana María, Miranda, Carlos, Pina Sobrino, Ana, Dapena, E., Moreno Sánchez, María Ángeles, Errea, Pilar, Llamero, N., Díaz-Hernández, M. B., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Gogorcena Aoiz, Yolanda, Urbina, Valero, Dalmases, Josep, Ascasíbar-Errasti, J, Royo, José Bernardo, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Pereira-Lorenzo, J., Urrestarazu Vidart, Jorge, Ramos-Cabrer, Ana María, Miranda, Carlos, Pina Sobrino, Ana, Dapena, E., Moreno Sánchez, María Ángeles, Errea, Pilar, Llamero, N., Díaz-Hernández, M. B., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Gogorcena Aoiz, Yolanda, Urbina, Valero, Dalmases, Josep, Ascasíbar-Errasti, J, and Royo, José Bernardo
- Abstract
The nature and structure of genetic diversity in the Spanish apple germplasm preserved at the national level was widely unknown, since studies performed to date on this topic have been exclusively carried out at the regional scale. Here, 1453 accessions from Spanish collections of Malus × domestica were evaluated with a common set of 13 SSR (Simple Sequence Repeats) markers in order to estimate genetic diversity, to identify the underlying genetic structure and to unravel the relationships among them and among a wide set of international cultivars for reference. In total, 737 unique genotypes were identified, 581 diploids and 156 triploids. Using a model-based Bayesian clustering procedure, two reconstructed populations were obtained for diploid genotypes; one retaining only Spanish cultivars (42% of genotypes), and a second containing all foreign cultivars the latter exhibiting evidence supporting the existence of a secondary sub-structure. Similarly, analysis performed on the 156 triploid genotypes also revealed two reconstructed populations; one exclusively associated with local Spanish genotypes (44%). The Jaccard coefficient allowed clustering by UPGMA (Unweighted Pair Group Method) diploid and triploid genotypes, and remarkable differences in allelic composition among the different partitioning levels were found. AMOVA analyses showed moderate but significant differentiation among the main groups (0.08 ≤ FST ≤ 0.12). Our results highlight an important fraction of the Spanish apple germplasm that constitutes a differentiated genepool with respect to the international and commercial apple cultivars. Moreover, the extent of the Spanish genetic diversity was spatially distributed along the northern Iberian Peninsula, suggesting an extensive migration of genotypes along the country. This study is the first valuable action for genetic conservation of apple at the national scale, and constitutes a decisive step towards the definition of a Spanish core collection that
- Published
- 2017
30. Development of a standardized methodology for phenotypical characterizations in apple
- Author
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Ministerio de Ciencia e Innovación (España), CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Miranda, Carlos, Dapena, E., Urbina, Valero, Pereira-Lorenzo, Santiago, Errea, Pilar, Moreno Sánchez, María Ángeles, Urrestarazu Vidart, Jorge, Fernández-García, Marcos, Ramos-Cabrer, Ana María, Díaz-Hernández, M. B., Pina Sobrino, Ana, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Dalmases, Josep, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Gogorcena Aoiz, Yolanda, Ascasíbar-Errasti, J, Royo, José Bernardo, Ministerio de Ciencia e Innovación (España), CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Miranda, Carlos, Dapena, E., Urbina, Valero, Pereira-Lorenzo, Santiago, Errea, Pilar, Moreno Sánchez, María Ángeles, Urrestarazu Vidart, Jorge, Fernández-García, Marcos, Ramos-Cabrer, Ana María, Díaz-Hernández, M. B., Pina Sobrino, Ana, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Dalmases, Josep, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Gogorcena Aoiz, Yolanda, Ascasíbar-Errasti, J, and Royo, José Bernardo
- Abstract
The description of phenotypic traits in apple cultivars is generally performed using internationally agreed descriptors such as UPOV guidelines, which defines for each trait several states of expression. However, it is not always possible to classify a cultivar unambiguously using those guidelines, because in practice the states are not clearly enough defined or the example cultivars are not always available in the collections. This work presents the results of a harmonization project performed by the teams responsible of the main apple germplasm collections in Spain. The objective was to develop a standardized method for the 57 traits included in the TG/14/9 UPOV guidelines for apple characterization, defining their states of expression in a clear and unambiguous way for Spanish germplasm. Phenotypic data collected for more than 1,600 accessions from Spanish collections were used and the method to define each state depended on the type of expression. For quantitative traits the number of states and their limits were defined according to the variability that exists within and between accessions. For qualitative traits, high-resolution images clearly depicting each state were selected. A standardized characterization protocol for the 57 traits of apple germplasm has been provided, enabling to comparing properly the phenotypes of Spanish genetic resources.
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- 2017
31. Severe trimming and enhanced competition of laterals as a tool to delay ripening in Tempranillo vineyards under semiarid conditions
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Santesteban, Luis Gonzaga, primary, Miranda, Carlos, additional, Urrestarazu, Jorge, additional, Loidi, Maite, additional, and Royo, José Bernardo, additional
- Published
- 2017
- Full Text
- View/download PDF
32. Genetic diversity and structure of the Spanish apple genetic resources inferred using SSRs
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Pereira-Lorenzo, Santiago, Miranda, Carlos, Errea, Pilar, Dapena, E., Moreno Sánchez, María Ángeles, Ramos-Cabrer, Ana María, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Llamero, N., Díaz-Hernández, M. B., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Sanzol Sanz, Javier, Gogorcena Aoiz, Yolanda, Urbina, Valero, Dalmases, Josep, and Royo, José Bernardo
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genetic diversity ,germplasm ,Malus x domestica - Abstract
1 Pag., A total of 1543 accessions from Spanish collections of Malus x domestica Borkh were evaluated with a set of 13 SSRs, including 11 recommended by ECP/GR Malus/Pyrus WG, in order to estimate their genetic diversity and to identify the genetic structure and relationships among their accessions, as part of the objectives of the project funded by INIA “Harmonization of the methodology of characterization, assessment of genetic diversity and definition of the core collection of the apple germplasm conserved in Spanish genebanks”.
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- 2015
33. Genetic diversity of the Spanish apple genetic resources using SSRs
- Author
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Pereira-Lorenzo, Santiago, Miranda, Carlos, Ramos-Cabrer, Ana María, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Díaz-Hernández, Belén, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Errea Abad, Pilar, Sanzol Sanz, Javier, Urbina, Valero, Dalmases, Josep, Blanco Braña, Álvaro, Moreno Sánchez, María Ángeles, Gogorcena Aoiz, Yolanda, and Royo, José Bernardo
- Abstract
The Spanish Program of Plant Genetic Resources integrates, among others, the collections located at Public University of Navarre, Centro de Investigaciones Agrarias de Mabegondo, Cabildos (Tenerife, La Palma and Gran Canaria), University of Lleida, Estación Experimental de Aula Dei-CSIC and CITA of Aragon. Those collections include mainly local cultivars from their respective regions, covering most of the Spanish apple-growing areas. Though some previous studies about the genetic variability of apple genetics resources from Spain were already performed, a complete analysis is needed in order to evaluate the complete diversity of Malus spp. in Spain. For doing that, the Spanish Government funded the project ¿Harmonization of the methodology of characterization, assessment of genetic diversity and definition of the core collection of the apple germplasm conserved in Spanish genebanks¿. In total, we have evaluated 1206 accessions using standardized methodologies, with SSR markers and morphological descriptors. SSR fingerprinting was performed with 13 SSR markers. SSR profiles were obtained independently and allele sizes were compared using a common set of cultivars selected as references. Results showed 601 genotypes for 1206 accessions. Most of the genotypes (438) were identified only in one accession. The other 163 genotypes were repeated in two to 81 accessions (involving 767 accessions in total). The harmonization of morphological descriptors will allow us to determine if the accessions with the same genotype are synonymies or closely related individuals. Results of this study highlight the interest of coordinated actions in order to optimize the management of germplasm collections and to evaluate the complete genetic diversity of Malus spp. in Spain.
- Published
- 2014
34. Genetic diversity of the Spanish apple genetic resources using SSRs: abstract
- Author
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Pereira Lorenzo, Santiago, Miranda, Carlos, Ramos Cabrer, Ana María, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Díaz Hernández, Belén, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Errea Abad, María Pilar, Sanzol Sanz, Javier, Urbina, Valero, Dalmases, Josep, Blanco Braña, Alvaro, Moreno Sánchez, María Angeles, Gogorcena Aoiz, Yolanda, and Royo, José Bernardo
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Manzana ,Malus ,Hortofruticultura ,ComputingMethodologies_GENERAL ,Identificación ,GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries) - Abstract
Published Poster number 69
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- 2014
35. Diversidad genética de las colecciones españolas de manzano evaluada con SSR
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Miranda, Carlos, Pereira-Lorenzo, Santiago, Ramos-Cabrer, Ana María, Urrestarazu Vidart, Jorge, Pina Sobrino, Ana, Díaz-Hernández, M. B., Santesteban, Luis Gonzaga, Laquidain, María Jesús, Dapena, E., Errea, Pilar, Sanzol Sanz, Javier, Urbina, Valero, Dalmases, Josep, Blanco Braña, Álvaro, Moreno Sánchez, María Ángeles, Gogorcena Aoiz, Yolanda, and Royo, José Bernardo
- Subjects
identificación ,estandarización ,Malus x domestica ,manzano - Abstract
2 Pags., La Red de Colecciones de manzano del Programa Nacional de Recursos Fitogenéticos integra, entre otras, a las colecciones situadas en la Universidad Pública de Navarra (UPNA), el Centro de Investigaciones Agrarias de Mabegondo (CIAM), Cabildos (Tenerife, La Palma y Gran Canaria), la Universidad de Lleida (UdL), el Servicio Regional de Investigación y Desarrollo de Asturias (SERIDA), la Estación Experimental de Aula Dei-CSIC (EEAD) y el Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA). Estas colecciones comprenden mayoritariamente cultivares locales prospectados en sus respectivas regiones y, en conjunto, representan la práctica totalidad de áreas productoras de manzano del país. Las colecciones habían sido caracterizadas, total o parcialmente, con caracteres morfológicos, agronómicos y moleculares, pero los métodos, caracteres y marcadores que se emplearon no estaban estandarizados, por lo que para evaluar de forma global la diversidad conservada por la Red era preciso realizar un trabajo previo de armonización. En este contexto, en 2012 se inició el Proyecto Coordinado "Armonización de la metodología de caracterización, evaluación de la diversidad genética y definición de la colección nuclear de los recursos genéticos de manzano conservados en los Bancos de Germoplasma españoles" (RF2011-00017-COS-OO), financiado por el INIA, e integrado por las colecciones citadas anteriormente. Su objetivo principal es el de optimizar el manejo de los recursos genéticos del manzano conservado en España, desarrollando e implantando metodologías y criterios comunes para la caracterización morfológica, agronómica, tecnológica y molecular de las colecciones. En esta comunicación presentamos los primeros resultados obtenidos de la armonización de las caracterizaciones moleculares., Este trabajo ha sido financiado por el proyecto INIA RF2011-00017-C05-00.
- Published
- 2014
36. Development of a standardized methodology for phenotypical characterizations in apple
- Author
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Miranda, Carlos, Dapena, E., Urbina, Valero, Pereira-Lorenzo, Santiago, Errea, Pilar, Moreno Sánchez, María Ángeles, Urrestarazu Vidart, Jorge, Fernández-García, Marcos, Ramos-Cabrer, Ana María, Díaz Hernández, M.B., Pina Sobrino, Ana, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Dalmases, Josep, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Gogorcena Aoiz, Yolanda, Ascasíbar-Errasti, J, Royo, José Bernardo, Miranda, Carlos, Dapena, E., Urbina, Valero, Pereira-Lorenzo, Santiago, Errea, Pilar, Moreno Sánchez, María Ángeles, Urrestarazu Vidart, Jorge, Fernández-García, Marcos, Ramos-Cabrer, Ana María, Díaz Hernández, M.B., Pina Sobrino, Ana, Santesteban, Luis Gonzaga, Laquidain, María Jesús, Dalmases, Josep, Espiau Ramírez, María Teresa, Reig Córdoba, Gemma, Gogorcena Aoiz, Yolanda, Ascasíbar-Errasti, J, and Royo, José Bernardo
- Abstract
This work presents the results of a harmonization project performed by the teams responsible of the main apple germplasm collections in Spain. The objective was to develop a standardized method for the 57 traits included in the TG/14/9 UPOV guidelines for apple characterization, defining their states of expression in a clear and unambiguous way for Spanish germplasm.
- Published
- 2015
37. Sap flow as a tool to enhance fruit quality: the case of olive oil
- Author
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A. Diaz-Espejo, V. Hernandez-Santana, G. Beltran, L.G. Santesteban, R. Alvarez, Ministerio de Ciencia e Innovación (España), European Commission, Centro para el Desarrollo Tecnológico Industrial (España), Hernández Santana, V. [0000-0001-9018-8622], Santesteban, Luis Gonzaga [0000-0001-6924-6744], Álvarez, Rosario [0000-0003-0143-7688], Beltrán Maza, G. [0000-0002-4281-9132], Díaz-Espejo, Antonio [0000-0002-4711-2494], Hernández Santana, V., Santesteban, Luis Gonzaga, Álvarez, Rosario, Beltrán Maza, G., and Díaz-Espejo, Antonio
- Subjects
Stomatal conductance ,Horticulture ,Water stress ,Virgin olive oil ,Environmental science ,Triterpenes ,Sap flux density ,Olive oil - Abstract
8 páginas.- 3 figuras.- referencias.- Comunicación oral presentada en el XI International Workshop on Sap Flow 7-11 Oct. 2019 in Hyytiälä (Finland), Olive oil is considered as one of the healthiest oils for human consumption due to its high amount of monounsaturated fats and also to the content of antioxidants, polyphenols and triterpenes. Among these last compounds, the oleanolic acid and maslinic acid are of great interest because they are shown to have anti-tumoral and anti-cancer activity. Interestingly, water stress has been observed to enhance these compounds in olive oil. Thus, an irrigation tool based on tree physiology to manage the water stress level would be useful for improving health benefits of olive oil. The general objective of our work was to develop an irrigation approach, based on sap flow-related measurements, to evaluate and control the water stress of olive trees in order to increase the above-mentioned compounds in olive. To achieve this objective we conducted an experiment having four irrigation treatments, where we applied 100, 75, 50 and 25% of the irrigation needs. Sap flow gauges were installed in 16 olive trees, four replicates for each irrigation treatment, to estimate sap flux density by the compensation heat flux method. Sap flux density was used to estimate stomatal conductance in a continuous manner, using a method developed previously for olive. This simulated stomatal conductance was linked to a biochemical model of CO2 assimilation to estimate daily photosynthesis. Moreover, we determined the carbon isotope ratio (δC) in oil of the same monitored trees, as well as the oil compounds above-mentioned. Our results showed that those trees with a higher water supply had higher accumulated photosynthesis on a daily and seasonal basis. Oil δ13C showed the same trend, confirming the effect of stomatal closure on reduction of oil synthesis and the robustness of our methodological procedure to estimate gas exchange from sap flux density dynamics. Furthermore, the level of stomatal conductance achieved correlated inversely with the concentrations of oleanic acid and maslinic acid in the oil. Our results encourage the potential use of sap flow-related measurements to manage irrigation and control the desired level of water stress based on physiological criteria, which could be useful to improve the content of relevant compounds in olives., This work was funded by the Centro para el Desarrollo Tecnológico Industrial and the research project AGL2015-71585-R (Spanish Ministry of Science and Innovation), the European project ERA-NET JPI-Waterworks (PCIN-2017-002, UE) and Grupo Castillo de Canena. A. Pérez-Martı́n and R. Romero helped us with the field measurements.
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- 2020
- Full Text
- View/download PDF
38. Evaluating Treatments for the Protection of Grapevine Pruning Wounds from Natural Infection by Trunk Disease Fungi.
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Leal C, Bujanda R, López-Manzanares B, Ojeda S, Berbegal M, Villa-Llop A, Santesteban LG, Palacios J, and Gramaje D
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- Strobilurins pharmacology, Biological Control Agents pharmacology, Biphenyl Compounds pharmacology, Pyrazoles pharmacology, Hypocreales physiology, Spain, France, Trichoderma physiology, Niacinamide analogs & derivatives, Vitis microbiology, Plant Diseases microbiology, Plant Diseases prevention & control, Fungicides, Industrial pharmacology
- Abstract
Infection of grapevines by fungal pathogens causing grapevine trunk diseases (GTDs) primarily arises from annual pruning wounds made during the dormant season. While various studies have showcased the efficacy of products in shielding pruning wounds against GTD infections, most of these investigations hinge on artificial pathogen inoculations, which may not faithfully mirror real field conditions. This study aimed to evaluate and compare the efficacy of various liquid formulation fungicides (pyraclostrobin + boscalid) and paste treatments, as well as biological control agents (BCA: Trichoderma atroviride SC1, T. atroviride I-1237, and T. asperellum ICC012 + T. gamsii ICC080), for their potential to prevent natural infection of grapevine pruning wounds by trunk disease fungi in two field trials located in Samaniego (Northern Spain) and Madiran (Southern France) over three growing seasons. Wound treatments were applied immediately after pruning in February. One year after pruning, canes were harvested from vines and brought to the laboratory for assessment of Trichoderma spp. and fungal trunk pathogens. More than 1,200 fungal isolates associated with five GTDs (esca, Botryosphaeria, Diaporthe and Eutypa diebacks, and Cytospora canker) were collected from the two vineyards each growing season. Our findings reveal that none of the products under investigation exhibited complete effectiveness against all the GTDs. The efficacy of these products was particularly influenced by the specific year of study. A notable exception was observed with the biocontrol agent T. atroviride I-1237, which consistently demonstrated effectiveness against Botryosphaeria dieback infections throughout each year of the study, irrespective of the location. The remaining products exhibited efficacy in specific years or locations against particular diseases, with the physical barrier (paste) showing the least overall effectiveness. The recovery rates of Trichoderma spp. in treated plants were highly variable, ranging from 17 to 100%, with both strains of T. atroviride yielding the highest isolation rates. This study underscores the importance of customizing treatments for specific diseases, taking into account the influence of environmental factors for BCA applications., Competing Interests: The author(s) declare no conflict of interest.
- Published
- 2024
- Full Text
- View/download PDF
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