554 results on '"Sanju, S"'
Search Results
2. Method validation, household cooking effect on pesticide residues, and evaluation of processing factors in rice
- Author
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Barad, Bhumi D., Parmar, Kaushik D., Thorat, Sanju S., Litoriya, Nitesh S., and Chawla, Suchi
- Published
- 2023
- Full Text
- View/download PDF
3. Topic Based Temporal Generative Short Text Clustering
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Smitha, E. S., Sendhilkumar, S., Mahalakshmi, G. S., Krithika Sanju, S., Xhafa, Fatos, Series Editor, Pandian, A. Pasumpon, editor, Senjyu, Tomonobu, editor, Islam, Syed Mohammed Shamsul, editor, and Wang, Haoxiang, editor
- Published
- 2020
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4. Non-classical monocytes and its potential in diagnosing sepsis post cardiac surgery
- Author
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Sebastian, Agnes, Sanju, S., Jain, Paresh, Priya, Veeraraghavan Vishnu, Varma, Praveen Kerala, and Mony, Ullas
- Published
- 2021
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5. A Systematic Review on Products and Services of IBS Software Private Limited
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Anand, Sanju S., primary and Kini, Shashidhar, additional
- Published
- 2023
- Full Text
- View/download PDF
6. Extracellular Trap by Blood Cells: Clinical Implications
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Nija, R. J., Sanju, S., Sidharthan, Neeraj, and Mony, Ullas
- Published
- 2020
- Full Text
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7. P2Y2 purinergic receptor gene deletion protects mice from bacterial endotoxin and sepsis-associated liver injury and mortality
- Author
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Arunachalam, Athis R., primary, Samuel, Sanju S., additional, Mani, Arunmani, additional, Maynard, Janielle P., additional, Stayer, Kelsey M., additional, Dybbro, Eric, additional, Narayanan, Subapradha, additional, Biswas, Aalekhya, additional, Pathan, Saliha, additional, Soni, Krishnakant, additional, Kamal, Abu Hena Mostafa, additional, Ambati, Chandra Shekar R., additional, Putluri, Nagireddy, additional, Desai, Moreshwar S., additional, and Thevananther, Sundararajah, additional
- Published
- 2023
- Full Text
- View/download PDF
8. Innate lymphoid cells: Potent early mediators of the host immune response during sepsis
- Author
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Theertha, M., Sanju, S., Priya, Veeraraghavan Vishnu, Jain, Paresh, Varma, Praveen K., and Mony, Ullas
- Published
- 2020
- Full Text
- View/download PDF
9. Oral Health Considerations for the Management of Patients with Junctional Epidermolysis Bullosa
- Author
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Sumita Upadhyay, Rasna Shrestha, Parayash Dallakoti, Sanju S Poudel, and Diwas Dhungana
- Published
- 2022
10. Topic Based Temporal Generative Short Text Clustering
- Author
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Smitha, E. S., primary, Sendhilkumar, S., additional, Mahalakshmi, G. S., additional, and Krithika Sanju, S., additional
- Published
- 2019
- Full Text
- View/download PDF
11. Neural network based predictive control of DC motor position by Newton - Raphson method.
- Author
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Periyasamy, D., Amutha Priya, N., Gopakumar, S., Nithya, S., and Sanju, S.
- Subjects
ELECTRIC motors ,ELECTRIC circuits ,NEWTON-Raphson method ,PREDICTIVE tests - Abstract
DC motor operation with accurate position control marks a positive impact for the functioning of the motor driven system in the electric sector. Rotor position control aspect favours the necessity of precise movement of the connected load. In this paper, model predictive control algorithm drives the positioning control of DC motor and neural network using Newton-Raphson method trains the data in an orderly fashion to achieve desired output. Model predictive control tests the functioning of required position enabling DC motor operation through MATLAB program codings. The test results pose the necessity of position control in the system when compared to its absence. Plant model is designed using MATLAB/Simulink and the necessary training and testing is carried out using codings. Results picturize the need of stated algorithms for the accurate positioning of rotor and precise application of motor in an electric circuit. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
12. Glycemic status among newly diagnosed tuberculosis patients and their treatment outcomes- A prospective cohort study
- Author
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Hithaish Kumar R. N., Chythra R. Rao, Reshma Kumarchandra, Ravindra Maradi, and Chidananda Sanju S. V.
- Subjects
General Medicine ,General Biochemistry, Genetics and Molecular Biology - Abstract
Introduction and Aim: Tuberculosis is a serious systemic infection, which is a serious threat for developing countries including India. To address the disease burden, India has rolled out National Tuberculosis Elimination Program (NTEP) incorporating daily drug regimen with appropriate weight bands for treatment. Monitoring treatment outcomes for daily drug regimen with one-year post-treatment follow-up was the objective of the study. Materials and Methods: A prospective community-based cohort study was conducted between January 2020 and September 2021, in Udupi district. Patients were recruited from 62 different Primary health centres. Their baseline data was collected, glycaemic status was assessed using glycated hemoglobin. The patients were followed up till their treatment completion and one-year post-treatment follow-up was also done. Results: One hundred and two patients were diagnosed with tuberculosis during the 1st quarter of 2020 (Jan-Mar 2020) and started on daily drug regimen treatment. Favourable outcomes were noted among 107(95.1%), while unfavourable outcomes were noted among 5(4.9%). Females in younger age group and free from comorbidities had favourable outcomes. Older age groups, prediabetics, patients with lower BMI, and pulmonary tuberculosis had unfavourable outcomes. Conclusion: The daily drug regimen for tuberculosis was found to be effective in terms of reducing the treatment failure rates. Evaluation of glycaemic status using Glycosylated hemoglobin at the time of diagnosis of tuberculosis is desirable. So that, life style modification could be suggested to avoid progression of prediabetes to diabetes. Screening for diabetes using Glycosylated hemoglobin at treatment initiation is advocated to avoid unfavourable outcomes during TB treatment.
- Published
- 2022
13. Accident Prediction and Analysis using Machine Learning models
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Krishna, U. Vivek, primary, Sudhakaran, S., additional, Sanju, S., additional, Vignesh, E., additional, and Kaladevi, R., additional
- Published
- 2023
- Full Text
- View/download PDF
14. Weather Prediction using linear regression model
- Author
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Vivek Krishna, U, primary, Sanju, S, additional, Sudhakaran, S, additional, Kaladevi, R, additional, and Shanmugasundaram, Hariharan, additional
- Published
- 2023
- Full Text
- View/download PDF
15. Oral Health Considerations for the Management of Patients with Junctional Epidermolysis Bullosa
- Author
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Upadhyay, Sumita, primary, Shrestha, Rasna, additional, Dallakoti, Parayash, additional, Poudel, Sanju S, additional, and Dhungana, Diwas, additional
- Published
- 2022
- Full Text
- View/download PDF
16. MICRO AND NANOPARTICLES FOR THE DELIVERY OF GROWTH FACTORS IN DIABETIC WOUNDS
- Author
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Lavanya Mude, Sriram Narukulla, Vyshnavi Tallapaneni, Veera Venkata Satyanarayana Reddy Karri, Sanju S, and Divya Pamu
- Subjects
Pharmacology ,medicine.medical_specialty ,Low oxygen ,business.industry ,Growth factor ,medicine.medical_treatment ,Pharmaceutical Science ,Inflammation ,medicine.disease ,Hemostasis ,Diabetes mellitus ,Drug Discovery ,Drug delivery ,Diabetic wound healing ,Medicine ,medicine.symptom ,business ,Intensive care medicine ,Wound healing ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) - Abstract
Diabetic wound (DW) is one of the leading complications of diabetes patients with a long history. It also puts an economic burden on people recovering from injuries to manage medication. The critical factors in the treatment of DW are infection, inflammation, and low oxygen level. Since these non-healing injuries are linked to the extended recovery process, current treatments are studied only for a short period. The areas covered in this article are an overview of DM, Pathophysiology of DW, stages of wound healing (Hemostasis, Inflammation, Proliferation, Maturation), the role of growth factor in diabetic wound healing, advantages of micro and nanoparticles over other drug delivery systems and micro and nanoparticles for the delivery of growth factors with different studies.
- Published
- 2021
17. Bio-efficacy of Some Insecticides against Hoppers in Rice.
- Author
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Barad, Bhumiben D., Parmar, Kaushik kumar D., Thorat, Sanju S., and Mohapatra, Atul R.
- Subjects
INSECTICIDES ,LEAFHOPPERS ,PLANTHOPPERS ,BIFENTHRIN ,CLOTHIANIDIN ,FIPRONIL ,IMIDACLOPRID - Abstract
The field experiment was carried out to evaluate the efficacy of different insecticides against hoppers on rice. The result revealed that, pymetrozine 50 WG was the best in reducing the white backed plant hopper (WBPH) and green leaf hopper (GLH) with 2.95 and 2.89 hoppers per hill, respectively, which was followed by clothianidin 50 WDG (3.05 WBPH and 2.99 GLH per hill) and flonicamid 50 WG (3.45 WBPH and 3.33 GLH per hill). The treatments imidacloprid 70 WG (4.47 WBPH and 3.87 GLH per hill) and fipronil 5 SC (5.61 WBPH and 4.44 GLH per hill) were found moderately effective, while bifenthrin 10 EC (6.76 WPBH and 4.92 GLH per hill) and cartap hydrochloride 50 SP (7.07 WBPH and 5.45 GLH per hill) were found to be the least effective in managing the WBPH and GLH. In case of natural enemies' population, no detrimental impact of insecticides was observed on the population of spiders as the treatment differences were non-significant. Amongst the seven insecticides evaluated, pymetrozine 50 WG treated plots recorded the highest grain and straw yield. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
18. Active Case Finding for Tuberculosis through TOUCH Agents in Selected High TB Burden Wards of Kolkata, India: A Mixed Methods Study on Outcomes and Implementation Challenges
- Author
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Abhijit Dey, Pruthu Thekkur, Ayan Ghosh, Tanusree Dasgupta, Soumyajyoti Bandopadhyay, Arista Lahiri, Chidananda Sanju S V, Milan K. Dinda, Vivek Sharma, Namita Dimari, Dibyendu Chatterjee, Isita Roy, Anuradha Choudhury, Parthiban Shanmugam, Brojo Kishore Saha, Sanghamitra Ghosh, and Sharath Burugina Nagaraja
- Subjects
active case findings ,tuberculosis ,touch agent ,high tb burden area ,tb surveillance ,4s screening ,thali project ,sort it ,operational research ,Medicine - Abstract
Active case finding (ACF) for tuberculosis (TB) was implemented in 60 selected high TB burden wards of Kolkata, India. Community volunteers called TOUCH (Targeted Outreach for Upliftment of Community Health) agents (TAs) identified and referred presumptive TB patients (PTBPs) to health facilities for TB diagnosis and treatment. We aimed to describe the “care cascade” of PTBPs that were identified during July to December 2018 and to explore the reasons for attrition as perceived by TAs and PTBPs. An explanatory mixed-methods study with a quantitative phase of cohort study using routinely collected data followed by descriptive qualitative study with in-depth interviews was conducted. Of the 3,86242 individuals that were enumerated, 1132 (0.3%) PTBPs were identified. Only 713 (63.0%) PTBPs visited a referred facility for TB diagnosis. TB was diagnosed in 177 (24.8%). The number needed to screen for one TB patient was 2183 individuals. The potential reasons for low yield were stigma and apprehension about TB, distrust about TA, wage losses for attending health facilities, and substance abuse among PTBPs. The yield of ACF was suboptimal with low PTBP identification rate and a high attrition rate. Interviewing each individual for symptoms of TB and supporting PTBPs for diagnosis through sputum collection and transport can be adopted to improve the yield.
- Published
- 2019
- Full Text
- View/download PDF
19. Role of myeloid derived suppressor cells in sepsis
- Author
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Malavika, M., primary, Sanju, S., additional, Poorna, M.R., additional, Vishnu Priya, Veeraraghavan, additional, Sidharthan, Neeraj, additional, Varma, Praveen, additional, and Mony, Ullas, additional
- Published
- 2022
- Full Text
- View/download PDF
20. Quantitation of mHLA-DR and nCD64 by Flow Cytometry to Study Dysregulated Host Response: The Use of QuantiBRITE™ PE Beads and Its Stability
- Author
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Sanju, S., primary, Jain, Paresh, additional, Priya, Veeraraghavan Vishnu, additional, Varma, Praveen K., additional, and Mony, Ullas, additional
- Published
- 2022
- Full Text
- View/download PDF
21. Osteosynthesis of acute femoral neck fracture in a young adult with ipsilateral transfemoral amputation
- Author
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Renjith, KR, primary, Ezhuhachan, Suresh, additional, and Sanju, S, additional
- Published
- 2022
- Full Text
- View/download PDF
22. MICRO AND NANOPARTICLES FOR THE DELIVERY OF GROWTH FACTORS IN DIABETIC WOUNDS
- Author
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Sanju, S, primary
- Published
- 2021
- Full Text
- View/download PDF
23. Beta-thalassemia major complicated by intracranial hemorrhage and critical illness polyneuropathy
- Author
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Sanju, S., Tullu, M., Karande, S., Muranjan, M., and Parekh, P.
- Subjects
Brain -- Hemorrhage ,Thalassemia -- Case studies -- Complications and side effects -- Care and treatment ,Pediatric research ,Ethnic, cultural, racial issues/studies ,Social sciences ,Women's issues/gender studies - Abstract
Byline: S. Sanju, M. Tullu, S. Karande, M. Muranjan, P. Parekh Intracranial hemorrhage (ICH) is rarely seen in patients with thalassemia. A seven-year-old male, known case of beta-thalassemia major, on [...]
- Published
- 2019
24. Implementation of Industrial Engineering concepts in Apparel Industry to improving Productivity and it’s cost reduction
- Author
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Mekala, N, primary, Sanju, S D, additional, Thamaraiselvan, V, additional, and Kavya, M, additional
- Published
- 2021
- Full Text
- View/download PDF
25. Factors Affecting Diabetes Management among Tuberculosis-Diabetes Comorbid Patients in Udupi District.
- Author
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Swain, Ansuman, Rao, Arathi P., Sanju, S. V. Chidananda, and Kumar, Saurabh
- Subjects
DIABETES prevention ,TREATMENT of diabetes ,TUBERCULOSIS treatment ,TUBERCULOSIS prevention ,COUNSELING ,RESEARCH methodology ,CROSS-sectional method ,QUALITATIVE research ,DESCRIPTIVE statistics ,DATA analysis software ,THEMATIC analysis ,COMORBIDITY - Abstract
Background: Tuberculosis (TB)-diabetes comorbid cases have increased in India with Karnataka among the states with the highest numbers. The comorbidity adversely affects the prognosis of individual diseases. Diabetes management is crucial to the management of TB. Aim: This study aims to understand the factors influencing diabetes management, and the barriers and challenges affecting the management of diabetes in TB-Diabetes comorbid patients in Udupi district. Materials and Methods: For this mixed-method, cross-sectional study, TB-Diabetes comorbid patients, registered under the NIKSHAY in 2018 and 2019, and government Medical Officers were included in the study. Data were analyzed using SPSS. For the qualitative study, thematic analysis was done. Results: A total of 154 participants were included in the study. The disease the participant developed first, the place of diabetes diagnosis, person initiating diabetes treatment, and counseling (P < 0.05), were some of the factors affecting diabetes management. In addition, alcoholism, migrant status, and old age were some of the barriers in the management of diabetes among comorbid patients. Conclusion: Diabetes management of alcoholics, migrants, elderly patients, and patients without a family needs special consideration for the successful management of TB-Diabetes comorbidity. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
26. Prediction of potential drug interactions between repurposed COVID-19 and antitubercular drugs: an integrational approach of drug information software and computational techniques data
- Author
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Sonal Sekhar Miraj, Mithu Banerjee, Levin Thomas, Murali Munisamy, Muralidhar Varma, Chidananda Sanju S V, Gautham G. Shenoy, Sumit Raosaheb Birangal, Mahadev Rao, and Rajdeep Ray
- Subjects
Drug ,2019-20 coronavirus outbreak ,education.field_of_study ,Coronavirus disease 2019 (COVID-19) ,business.industry ,media_common.quotation_subject ,Population ,Clinical settings ,RM1-950 ,molecular docking ,QT prolongation ,repurposed COVID-19 drugs ,Drug interaction ,Bioinformatics ,Interaction studies ,antitubercular drugs ,Molecular level ,drug–drug interactions ,Medicine ,Pharmacology (medical) ,Therapeutics. Pharmacology ,business ,education ,Original Research ,media_common - Abstract
Introduction: Tuberculosis is a major respiratory disease globally with a higher prevalence in Asian and African countries than rest of the world. With a larger population of tuberculosis patients anticipated to be co-infected with COVID-19 infection, an ongoing pandemic, identifying, preventing and managing drug–drug interactions is inevitable for maximizing patient benefits for the current repurposed COVID-19 and antitubercular drugs. Methods: We assessed the potential drug–drug interactions between repurposed COVID-19 drugs and antitubercular drugs using the drug interaction checker of IBM Micromedex®. Extensive computational studies were performed at a molecular level to validate and understand the drug–drug interactions found from the Micromedex drug interaction checker database at a molecular level. The integrated knowledge derived from Micromedex and computational data was collated and curated for predicting potential drug–drug interactions between repurposed COVID-19 and antitubercular drugs. Results: A total of 91 potential drug–drug interactions along with their severity and level of documentation were identified from Micromedex between repurposed COVID-19 drugs and antitubercular drugs. We identified 47 pharmacodynamic, 42 pharmacokinetic and 2 unknown DDIs. The majority of our molecular modelling results were in line with drug–drug interaction data obtained from the drug information software. QT prolongation was identified as the most common type of pharmacodynamic drug–drug interaction, whereas drug–drug interactions associated with cytochrome P450 3A4 (CYP3A4) and P-glycoprotein (P-gp) inhibition and induction were identified as the frequent pharmacokinetic drug–drug interactions. The results suggest antitubercular drugs, particularly rifampin and second-line agents, warrant high alert and monitoring while prescribing with the repurposed COVID-19 drugs. Conclusion: Predicting these potential drug–drug interactions, particularly related to CYP3A4, P-gp and the human Ether-à-go-go-Related Gene proteins, could be used in clinical settings for screening and management of drug–drug interactions for delivering safer chemotherapeutic tuberculosis and COVID-19 care. The current study provides an initial propulsion for further well-designed pharmacokinetic-pharmacodynamic-based drug–drug interaction studies. Plain Language Summary Introduction: Tuberculosis is a major respiratory disease globally with a higher prevalence in Asian and African countries than rest of the world. With a larger population of tuberculosis patients predicted to be infected with COVID-19 during this period, there is a higher risk for the occurrence of medication interactions between the medicines used for COVID-19 and tuberculosis. Hence, identifying and managing these interactions is vital to ensure the safety of patients undergoing COVID-19 and tuberculosis treatment simultaneously. Methods: We studied the major medication interactions that could likely happen between the various medicines that are currently given for COVID-19 and tuberculosis treatment using the medication interaction checker of a drug information software (Micromedex®). In addition, thorough molecular modelling was done to confirm and understand the interactions found from the medication interaction checker database using specific docking software. Molecular docking is a method that predicts the preferred orientation of one medicine molecule to a second molecule, when bound to each other to form a stable complex. Knowledge of the preferred orientation may be used to determine the strength of association or binding affinity between two medicines using scoring functions to determine the extent of the interactions between medicines. The combined knowledge from Micromedex and molecular modelling data was used to properly predict the potential medicine interactions between currently used COVID-19 and antitubercular medicines. Results: We found a total of 91 medication interactions from Micromedex. Majority of our molecular modelling findings matched with the interaction information obtained from the drug information software. QT prolongation, an abnormal heartbeat, was identified as one of the most common interactions. Our findings suggest that antitubercular medicines, mainly rifampin and second-line agents, suggest high alert and scrutiny while prescribing with the repurposed COVID-19 medicines. Conclusion: Our current study highlights the need for further well-designed studies confirming the current information for recommending safe prescribing in patients with both infections.
- Published
- 2021
27. Osteosynthesis of Acute Femoral Neck Fracture in a Young Adult with Ipsilateral Transfemoral Amputation.
- Author
-
Suresh, Ezhuhachan, Renjith, K. R., and Sanju, S.
- Published
- 2022
- Full Text
- View/download PDF
28. Active Case Finding for Tuberculosis through TOUCH Agents in Selected High TB Burden Wards of Kolkata, India: A Mixed Methods Study on Outcomes and Implementation Challenges
- Author
-
Dey, Abhijit, primary, Thekkur, Pruthu, additional, Ghosh, Ayan, additional, Dasgupta, Tanusree, additional, Bandopadhyay, Soumyajyoti, additional, Lahiri, Arista, additional, Sanju S V, Chidananda, additional, Dinda, Milan K., additional, Sharma, Vivek, additional, Dimari, Namita, additional, Chatterjee, Dibyendu, additional, Roy, Isita, additional, Choudhury, Anuradha, additional, Shanmugam, Parthiban, additional, Saha, Brojo Kishore, additional, Ghosh, Sanghamitra, additional, and Nagaraja, Sharath Burugina, additional
- Published
- 2019
- Full Text
- View/download PDF
29. Beta-thalassemia major complicated by intracranial hemorrhage and critical illness polyneuropathy
- Author
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Tullu, MS, primary, Sanju, S, additional, Karande, S, additional, Muranjan, MN, additional, and Parekh, P, additional
- Published
- 2019
- Full Text
- View/download PDF
30. Is It Practical to Apply Moral Hazard in the Pediatric Setting?
- Author
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Sanju S. Samuel and Jessica A. Moore
- Subjects
03 medical and health sciences ,Issues, ethics and legal aspects ,0302 clinical medicine ,Process (engineering) ,business.industry ,Moral hazard ,030225 pediatrics ,030220 oncology & carcinogenesis ,Health Policy ,Medicine ,Engineering ethics ,business ,Clinical psychology - Abstract
Brunnquell and Michaelson (2016), the authors of the target article “Moral Hazard in Pediatrics,” propose a seven-step process to more completely understand the important elements of the ethical di...
- Published
- 2016
31. A New Algorithm Designing for Detection of Moving Objects in Video
- Author
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Tripty Singh, Bichu Vijay, and Sanju S
- Subjects
Motion detector ,Computer science ,Image quality ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,Robot ,Motion detection ,Segmentation ,Frame rate ,Algorithm - Abstract
Now a day’s video motion detection is implemented targeting a wide class of applications such as in autonomous video surveillance strategies for security and vision analysis, detecting human presence in destructed environments, etc. This paper proposes a method for detection of moving objects in highly secured environments where it can be deployed either on a robotic vehicle or at a static permanent position. The robot acquires information about its surroundings through a camera mounted on it in real time. Another objective of this paper is to increase the efficiency of moving objects detection in offline and online video processing mode. In offline mode, an AVI file is read and it is decomposed into frames. Noise removal is done to improve the image quality and segmentation is performed to detect the moving objects in the foreground by separating it from a known static background. Various operations are carried out and the moving object is identified by marking a rectangular box around the detected object in each frame. When a movement is spotted, alarm is activated. The distance between the centroid of the object in the video file is found and thus the velocity of the movement is determined. In online mode, by comparing each and every frame the presence of moving object is checked. When a prowler is detected, the proposed algorithm triggers the alarm. At that instant, the snapshot of the object is generated and from this, the distance to the object is identified. The proposed algorithm is tested with input AVI format video file of 320 x 240 frame size and frame rate 15fps in offline mode. In online mode, video file of 640 x 480 frame size and frame rate 25fps is captured in real time using a webcam. MATLAB is used for the execution of motion detector algorithms. The result is demonstrated in a different real sequence and analysis of algorithm on the basis of its performance is evaluated.
- Published
- 2014
32. Active Case Finding for Tuberculosis through TOUCH Agents in Selected High TB Burden Wards of Kolkata, India: A Mixed Methods Study on Outcomes and Implementation Challenges
- Author
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Sanghamitra Ghosh, Tanusree Dasgupta, Dibyendu Chatterjee, Vivek Sharma, Namita Dimari, Abhijit Dey, Milan Dinda, Brojo Kishore Saha, Chidananda Sanju S, Ayan Ghosh, Sharath Burugina Nagaraja, Pruthu Thekkur, Parthiban Shanmugam, Isita Roy, Anuradha Choudhury, Soumyajyoti Bandopadhyay, and Arista Lahiri
- Subjects
medicine.medical_specialty ,active case findings ,Tuberculosis ,lcsh:Medicine ,TOUCH Agent ,Article ,Medicine ,Attrition ,high TB burden area ,TB surveillance ,General Immunology and Microbiology ,business.industry ,lcsh:R ,Public Health, Environmental and Occupational Health ,operational research ,medicine.disease ,Number needed to screen ,Substance abuse ,Infectious Diseases ,SORT IT ,Family medicine ,Community health ,Case finding ,business ,4S Screening ,THALI Project ,Qualitative research ,Cohort study - Abstract
Active case finding (ACF) for tuberculosis (TB) was implemented in 60 selected high TB burden wards of Kolkata, India. Community volunteers called TOUCH (Targeted Outreach for Upliftment of Community Health) agents (TAs) identified and referred presumptive TB patients (PTBPs) to health facilities for TB diagnosis and treatment. We aimed to describe the &ldquo, care cascade&rdquo, of PTBPs that were identified during July to December 2018 and to explore the reasons for attrition as perceived by TAs and PTBPs. An explanatory mixed-methods study with a quantitative phase of cohort study using routinely collected data followed by descriptive qualitative study with in-depth interviews was conducted. Of the 3,86242 individuals that were enumerated, 1132 (0.3%) PTBPs were identified. Only 713 (63.0%) PTBPs visited a referred facility for TB diagnosis. TB was diagnosed in 177 (24.8%). The number needed to screen for one TB patient was 2183 individuals. The potential reasons for low yield were stigma and apprehension about TB, distrust about TA, wage losses for attending health facilities, and substance abuse among PTBPs. The yield of ACF was suboptimal with low PTBP identification rate and a high attrition rate. Interviewing each individual for symptoms of TB and supporting PTBPs for diagnosis through sputum collection and transport can be adopted to improve the yield.
- Published
- 2019
33. Role of yoga intervention on quality of life and prehypertension.
- Author
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Ankolekar, Vrinda Hari, G., Govardhan Reddy, V., Chidananda Sanju S., and H., Mamatha
- Subjects
YOGA ,QUALITY of life ,PREHYPERTENSION ,BLOOD pressure ,YOGIC therapy - Abstract
In developing countries like India, hypertension poses a major problem. Rise in blood pressure for a prolonged period above the normal range is labeled as hypertension and this is usually preceded by prehypertension. Yogic exercises done on regular basis can have beneficial effects on hypertension. The aim of present study was to evaluate the effects of yogic exercises in controlling blood pressure in pre-hypertensive. Security personnel were screened for hypertension and the subjects with pre-hypertension were selected for study. subjects with pre-hypertension were divided into control and intervention group by using simple random sampling method. Intervention group were trained for yoga and both the groups were followed up to check blood pressure every 3 months. The study observed a decrease in weight and blood pressure of intervention group as compared to the control group but it was not statistically significant. The intervention group showed significant improvement in self rated quality of life compared to the control group. Yogasanas and meditation seems to have an antihypertensive effect and a positive effect on self rated quality of lifeby intervention group as compared to the control group. This proves that simple yogasanas and meditation could be useful to improve the quality of life and control blood pressure in subjects with pre-hypertension. [ABSTRACT FROM AUTHOR]
- Published
- 2019
34. Is It Practical to Apply Moral Hazard in the Pediatric Setting?
- Author
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Moore, Jessica Anne, primary and Samuel, Sanju S., additional
- Published
- 2016
- Full Text
- View/download PDF
35. RNAi: An imminent eco-friendly approach for sustainable crop productivity
- Author
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Sanju, Suman, Thakur, Aditi, Singh, Ashu, Singh, Bir Pal, Verma, OP, Ramteke, Pramod W., Sengar, R. S., Shukla, Pradeep Kumar, and Misra, Pragati
- Published
- 2019
- Full Text
- View/download PDF
36. Flutter Analysing Over an Aircraft Wing During Cruise Speed
- Author
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Bibin, C., primary, Selvaraj, Micheal Johnson, additional, and Sanju, S., additional
- Published
- 2012
- Full Text
- View/download PDF
37. Intraoral distraction osteogenesis of mandible in mandibular hypoplasia
- Author
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Sudesh, Kumar, Vikram, Prabhakar, Sanju, Singla, and Ritesh, Gupta
- Published
- 2010
38. In-vitro detached leaf assay of host-mediated RNAi lines carrying Phytophthora Infestans Avr3a effector gene for late blight resistance
- Author
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Sanju, S., Aditi Thakur, Siddappa, S., Sharma, S., Shukla, P. K., Srivastava, N., Pattanayak, D., and Singh, B. P.
39. Multifunctional Neural Probes Enable Bidirectional Electrical, Optical, and Chemical Recording and Stimulation In Vivo.
- Author
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Driscoll N, Antonini MJ, Cannon TM, Maretich P, Olaitan G, Van VDP, Nagao K, Sahasrabudhe A, Paniagua EV, Frey EJ, Kim YJ, Hunt S, Hummel M, Mupparaju S, Jasanoff A, Venton BJ, and Anikeeva P
- Abstract
Recording and modulation of neuronal activity enables the study of brain function in health and disease. While translational neuroscience relies on electrical recording and modulation techniques, mechanistic studies in rodent models leverage genetic precision of optical methods, such as optogenetics and fluorescent indicator imaging. In addition to electrical signal transduction, neurons produce and receive diverse chemical signals which motivate tools to probe and modulate neurochemistry. Although the past decade has delivered a wealth of technologies for electrophysiology, optogenetics, chemical sensing, and optical recording, combining these modalities within a single platform remains challenging. This work leverages materials selection and convergence fiber drawing to permit neural recording, electrical stimulation, optogenetics, fiber photometry, drug and gene delivery, and voltammetric recording of neurotransmitters within individual fibers. Composed of polymers and non-magnetic carbon-based conductors, these fibers are compatible with magnetic resonance imaging, enabling concurrent stimulation and whole-brain monitoring. Their utility is demonstrated in studies of the mesolimbic reward pathway by interfacing with the ventral tegmental area and nucleus accumbens in mice and characterizing the neurophysiological effects of a stimulant drug. This study highlights the potential of these fibers to probe electrical, optical, and chemical signaling across multiple brain regions in both mechanistic and translational studies., (© 2024 The Author(s). Advanced Materials published by Wiley‐VCH GmbH.)
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- 2024
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40. Prioritization of the Secondary Metabolites for the Rapid Annotation Based on Liquid Chromatography-High Resolution Mass Spectrometry Assessment: Varanasine and Schroffanone from Murraya paniculata and Cytotoxic Evaluation.
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Kumari S, Prathyusha B, Chatterjee E, Tripathi N, Chakrabarty S, Bhardwaj N, Guru SK, Agastinose Ronickom JF, and Jain SK
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- Humans, Chromatography, Liquid methods, Plant Extracts pharmacology, Plant Extracts chemistry, Alkaloids pharmacology, Alkaloids analysis, Mass Spectrometry methods, Cell Line, Tumor, Metabolome, Apoptosis drug effects, Murraya chemistry, Coumarins pharmacology, Coumarins metabolism, Coumarins analysis, Secondary Metabolism
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The liquid chromatography-high resolution mass spectrometry (LC-HRMS) technique enables the detection of phytochemicals present in the extracts. LC-HRMS-generated mass list showed abundant compounds of interest, artifacts, and primary metabolites. The identification of a secondary metabolite of interest within the extract is very challenging. We hypothesized that identifying the "new metabolite" in the whole metabolome is more challenging than identifying it within the class of metabolites. The proposed prioritization strategy focused on the elimination of unknown and prioritizing the known class of secondary metabolites to identify new metabolites. The prioritization strategy demonstrated on Murraya paniculata for the identification of new metabolites. LC-HRMS-generated information is used as a filter to target the secondary metabolite and the new metabolites. This strategy successfully annotated the new coumarin and coumarin alkaloids from the mass list of 1448 metabolites. Varanasine ( 3 ), schroffanone ( 4 ), schroffanene ( 5 ), and O -methylmurraol ( 9 ) are new compounds, and coumarin ( 1 , 2 , and 6-8 ) are known. Varanasine ( 3 ) is the first naturally occurring 7-aminocoumarin with additional N -formyl functionality. The isolates were screened for cytotoxicity against the panel of cancer cell lines. Varanasine ( 3 ) and minumicrollin ( 6 ) showed significant cytotoxicity and apoptosis-inducing potential. The immunoblot analysis confirmed inhibition of apoptotic protein PARP-1 and caspase-3 expression by 3 and 6 .
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- 2024
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41. CRISPR-based electrochemical biosensors for animal health: Recent advances.
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Gattani A, Mandal S, Agrawal A, Patel P, Jain AK, Singh P, Garg A, and Mishra A
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- Animals, Electrochemical Techniques methods, Electrochemical Techniques instrumentation, CRISPR-Cas Systems, Clustered Regularly Interspaced Short Palindromic Repeats genetics, Animal Diseases diagnosis, Biosensing Techniques instrumentation, Biosensing Techniques methods
- Abstract
Animal diseases are a major concern to animal welfare, human health and the global economy. Early detection, prevention and control of these animal diseases are crucial to ensure sustainability of livestock sector, to reduce farm losses and protecting public health. Points of care (POC) devices are small, portable instruments that provide rapid results thus reduce the risk of disease transmission and enable early intervention. CRISPR based diagnostics offer more accurate and efficient solution for monitoring animal health due to their quick response, can detect very low level of pathogenic organism or disease markers and specificity. These diagnostics are particularly useful in the in area with limited resources or access to common diagnostic methods, especially in developing countries. The ability of electrochemical sensors to detect accurately very low analyte concentration makes them suitable for POC diagnostics and field application. CRISPR base electrochemical biosensors show great potential in revolutionizing disease detection and diagnosis including animal health. However, challenges, such as achieving selectivity and sensitivity, need to be addressed to enhance the competitiveness of these biosensors. Currently, most CRISPR based bioassay research focuses on nucleic acid target detection, but researchers exploring to monitor small organic/inorganic non-nucleic acid molecules like toxins and proteins. Emerging diagnostics would be centered on CRISPR-Cas system will offer great potential as an accurate, specific and effective means to identify microorganism, virus, toxins, small molecules, peptides and nucleic acid related to various animal health disorders particularly when integrated into electrochemical biosensing platform., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier Ltd.)
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- 2024
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42. Prevalence, management and outcomes of pulmonary metastases in hepatocellular carcinoma: a systematic review and meta-analysis.
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Emmamally M, Sobnach S, Khan R, Kotze U, Bernon M, Sonderup MW, Spearman CW, and Jonas E
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- Humans, Prevalence, Treatment Outcome, Risk Factors, Male, Female, Liver Neoplasms therapy, Liver Neoplasms mortality, Liver Neoplasms secondary, Liver Neoplasms surgery, Carcinoma, Hepatocellular therapy, Carcinoma, Hepatocellular mortality, Carcinoma, Hepatocellular secondary, Carcinoma, Hepatocellular surgery, Carcinoma, Hepatocellular pathology, Lung Neoplasms therapy, Lung Neoplasms mortality, Lung Neoplasms pathology
- Abstract
Background: Hepatocellular carcinoma (HCC) presents a significant global health burden, with varying survival rates across regions. The presence of pulmonary metastases (PM) in HCC predicts a poorer prognosis, yet the global understanding of the progression and management is limited., Methods: This study aims to systematically review the burden of PM in HCC, document current treatment approaches, and evaluate treatment effectiveness through meta-analysis. A comprehensive literature search was conducted across multiple databases. Articles were screened, and data extraction was performed independently by two reviewers. Statistical analyses were conducted to synthesise data and assess treatment outcomes., Results: A total of 82 articles were included, comprising a population of 3241 participants with documented PM. Our analysis revealed a linear relationship between the HCC population size and the occurrence of PM (p < 0.005). Surgical intervention demonstrated the lowest hazard ratio (0.128) and significantly improved survival rates compared to other treatment modalities. However, data quality limitations underscore the need for further research to delineate patient subsets benefitting from surgical intervention for PM., Conclusion: Our findings advocate for continued investigation into PM management strategies, notably the role of surgical resection alongside systemic therapies, to improve outcomes in HCC patients with PM., (Copyright © 2024 International Hepato-Pancreato-Biliary Association Inc. Published by Elsevier Ltd. All rights reserved.)
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- 2024
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43. Neurobiology of attention-deficit hyperactivity disorder: historical challenges and emerging frontiers.
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Koirala S, Grimsrud G, Mooney MA, Larsen B, Feczko E, Elison JT, Nelson SM, Nigg JT, Tervo-Clemmens B, and Fair DA
- Abstract
Extensive investigations spanning multiple levels of inquiry, from genetic to behavioural studies, have sought to unravel the mechanistic foundations of attention-deficit hyperactivity disorder (ADHD), with the aspiration of developing efficacious treatments for this condition. Despite these efforts, the pathogenesis of ADHD remains elusive. In this Review, we reflect on what has been learned about ADHD while also providing a framework that may serve as a roadmap for future investigations. We emphasize that ADHD is a highly heterogeneous disorder with multiple aetiologies that necessitates a multifactorial dimensional phenotype, rather than a fixed dichotomous conceptualization. We highlight new findings that suggest a more brain-wide, 'global' view of the disorder, rather than the traditional localizationist framework, which asserts that a limited set of brain regions or networks underlie ADHD. Last, we underscore how underpowered studies that have aimed to associate neurobiology with ADHD phenotypes have long precluded the field from making progress. However, a new age of ADHD research with refined phenotypes, advanced methods, creative study designs and adequately powered investigations is beginning to put the field on a good footing. Indeed, the field is at a promising juncture to advance the neurobiological understanding of ADHD and fulfil the promise of clinical utility., (© 2024. Springer Nature Limited.)
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- 2024
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44. Factors influencing the implementation of integrated screening for HIV, syphilis, and hepatitis B for pregnant women in Nepal: A qualitative study.
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Sabin L, Haghparast-Bidgoli H, Thapaliya B, Chand O, Bhattarai S, Arjyal A, and Saville N
- Abstract
In Nepal, national guidelines recommend free HIV and syphilis screening for pregnant women at their first antenatal visit, using an opt-out approach. However, screening uptake is low and the guidelines do not include hepatitis B screening. It is essential to understand the factors influencing the implementation of integrated screening for HIV, syphilis, and hepatitis B, as recommended by WHO, to improve uptake and prevent vertical transmission. This study explored the knowledge, attitudes, and perceptions of pregnant women, their families, healthcare providers and policymakers on integrated prenatal screening. We conducted 12 in-depth interviews with pregnant women, 10 with their husbands and 4 with mothers-in-law in Kapilvastu and Kathmandu. In addition, we interviewed 7 health workers and 4 decision-makers. These interviews were sufficient to reach saturation. Data were analysed using a thematic content analysis. A combination of the social-ecological model and the WHO building blocks provided a theoretical framework for interpreting data. The analysis showed that antenatal screening in Nepal involved many stakeholders and was influenced by various factors. Implementation issues were found in the building blocks service delivery, health workforce and medical products. Husbands and in-laws play an important role in the acceptance of screening by pregnant women, especially in rural areas. High levels of stigma and discrimination against people with sexually transmitted diseases were reported, and knowledge of hepatitis B and syphilis was low. Access and uptake of screening could be improved through rapid testing, by strengthening the health system and by integrating hepatitis B screening through an opt-out approach like that for HIV and syphilis. Effective community involvement through awareness campaigns and investment in lower-level health facilities is essential to improve screening rates. This study provides information for decision-makers about challenges in implementing integrated screening to guide the design of targeted interventions to reduce vertical transmission., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Sabin et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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45. Multi-echo Acquisition and Thermal Denoising Advances Precision Functional Imaging.
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Moser J, Nelson SM, Koirala S, Madison TJ, Labonte AK, Carrasco CM, Feczko E, Moore LA, Lundquist JT, Weldon KB, Grimsrud G, Hufnagle K, Ahmed W, Myers MJ, Adeyemo B, Snyder AZ, Gordon EM, Dosenbach NUF, Tervo-Clemmens B, Larsen B, Moeller S, Yacoub E, Vizioli L, Uğurbil K, Laumann TO, Sylvester CM, and Fair DA
- Abstract
The characterization of individual functional brain organization with Precision Functional Mapping has provided important insights in recent years in adults. However, little is known about the ontogeny of inter-individual differences in brain functional organization during human development. Precise characterization of systems organization during periods of high plasticity is likely to be essential for discoveries promoting lifelong health. Obtaining precision fMRI data during development has unique challenges that highlight the importance of establishing new methods to improve data acquisition, processing, and analysis. Here, we investigate two methods that can facilitate attaining this goal: multi-echo (ME) data acquisition and thermal noise removal with Noise Reduction with Distribution Corrected (NORDIC) principal component analysis. We applied these methods to precision fMRI data from adults, children, and newborn infants. In adults, both ME acquisitions and NORDIC increased temporal signal to noise ratio (tSNR) as well as the split-half reliability of functional connectivity matrices, with the combination helping more than either technique alone. The benefits of NORDIC denoising replicated in both our developmental samples. ME acquisitions revealed longer and more variable T2* relaxation times across the brain in infants relative to older children and adults, leading to major differences in the echo weighting for optimally combining ME data. This result suggests ME acquisitions may be a promising tool for optimizing developmental fMRI, albeit application in infants needs further investigation. The present work showcases methodological advances that improve Precision Functional Mapping in adults and developmental populations and, at the same time, highlights the need for further improvements in infant specific fMRI., Competing Interests: 8.Declaration of Competing Interests Damien A. Fair is a patent holder on the Framewise Integrated Real-Time Motion Monitoring (FIRMM) software. He is also a co-founder of Turing Medical Inc that licenses this software. The nature of this financial interest and the design of the study have been reviewed by two committees at the University of Minnesota. They have put in place a plan to help ensure that this research study is not affected by the financial interest. Steven M. Nelson consults for Turing Medical, which commercializes FIRMM. This interest has been reviewed and managed by the University of Minnesota in accordance with its Conflict of Interest policies. Author Nico U. F. Dosenbach is a co-founder of Turing Medical Inc, has financial interest, and may benefit financially if the company is successful in marketing FIRMM motion monitoring software products. NUFD may receive royalty income based on FIRMM technology developed at Washington University School of Medicine (WUSOM) and licensed to Turing Medical Inc. Timothy O. Laumann holds a patent for taskless mapping of brain activity licensed to Sora Neurosciences and a patent for optimizing targets for neuromodulation, implant localization, and ablation is pending. TOL is also a consultant for Turing Medical Inc. Abraham Z. Snyder is a consultant for Sora Neurosciences. These potential conflicts of interest have been reviewed and are managed by Washington University School of Medicine. The other authors declare no competing interests.
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- 2024
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46. Prioritization before dereplication, an effective strategy to target new metabolites in whole extracts: ghosalin from Murraya paniculata root.
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Kumari S, Chakrabarty S, Kumar S, Kumar S, Agastinose Ronickom JF, and Jain SK
- Subjects
- Humans, Coumarins chemistry, Coumarins pharmacology, Coumarins metabolism, Coumarins analysis, Chromatography, Liquid methods, Cell Line, Tumor, Antineoplastic Agents, Phytogenic pharmacology, Antineoplastic Agents, Phytogenic chemistry, Plant Roots chemistry, Plant Roots metabolism, Plant Extracts chemistry, Plant Extracts pharmacology, Plant Extracts metabolism, Murraya chemistry
- Abstract
Re-discovery of known metabolites is a common challenge in natural product-based drug discovery, and to avoid re-discovery, dereplication has been proposed for identifying known metabolites at the early stage of isolation. A majority of methods use LCMS to profile the extract and ignore the known mass. LC-HRMS profiling may generate a long mass list of metabolites. The identification of a new metabolite is difficult within the mass list. To overcome this, it was hypothesized that identifying a 'new metabolite' in the whole metabolome is more difficult than identifying it within the class of metabolites. A prioritization strategy was proposed to focus on the elimination of unknown and uncommon metabolites first using the designed bias filters and to prioritize the known secondary metabolites. The study employed Murraya paniculata root for the identification of new metabolites. The LC-HRMS-generated mass list of 509 metabolites was subjected to various filters, which resulted in 93 metabolites. Subsequently, it was subjected to regular dereplication, resulting in 10 coumarins, among which 3 were identified as new. Further, chromatographic efforts led to the isolation of a new coumarin, named ghosalin (1). The structure of the new compound was established through 2D NMR and X-ray crystallography. Cytotoxicity studies revealed that ghosalin has significant cytotoxicity against cancer cell lines. The proposed prioritization strategy demonstrates an alternative way for the rapid annotation of a particular set of metabolites to isolate a new metabolite from the whole metabolome of a plant extract.
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- 2024
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47. Burden of Infertility, Its Risk Factors, Perceptions and Challenges Faced by Women of Peri-urban Community from Ahmedabad City: Mixed Method Study.
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Sharma R, Bakshi H, Patel P, Patel B, Gajjar S, Dave R, Bapat N, Mehta R, Mehta L, and Chaudhary P
- Abstract
Background: Infertility is globally prevalent and India accounts for 25% of the global burden, but it is still a neglected reproductive health issue. To estimate the prevalence of infertility, its determinants, perception and challenges faced by couples from the peri-urban area of Ahmedabad City., Materials and Methods: A community-based cross-sectional study was conducted in peri-urban areas of Ahmedabad City. For quantitative data collection, 689 couples were selected through probability proportion-based sampling (PPBS). Data was collected through a questionnaire during (1) phase I for socio-demographic details of the community and identification of eligible couples, (2) phase II for assessing the presence of infertility and its risk factors along with the assessment of depression and anxiety, and (3) phase III for Clinico-social profiling of all infertile couples (detected during second phase). Some of these women were involved in qualitative components to know the perceptions, challenges, etc. faced while seeking infertility treatment., Result: Study population of 917 families ( n = 3891) yielded 689 women of reproductive age group (RAG) with a period prevalence of 7.4% (5.5%-9.4%); separately being 3.5% and 3.9% for primary and secondary type respectively. Socio-demographic determinants like age, education, occupation, addiction, and lifestyle-related illnesses like diabetes and hypertension exhibited no significant association with infertility. However, asthma, mental illnesses, and hormonal diseases like polycystic ovarian disease (PCOD) were associated and exhibited a significant association with infertility. Preventable risk factors like reproductive tract/sexually transmitted infections (RTI/STI) showed a significantly positive association with infertility., Conclusion: The period prevalence of infertility was 7.4%, with the secondary type being more common. Asthma, mental illness, RTI/STI and age at menarche showed significant association. Screening and treatment for RTI/STI can prevent complications like infertility. Stigma associated with infertility and lack of treatment facilities in the government sector makes it difficult to deal with and neglected health problems., Competing Interests: There are no conflicts of interest., (Copyright: © 2024 Indian Journal of Community Medicine.)
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- 2024
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48. Inferring Characteristics of the Tumor Immune Microenvironment of Patients with HNSCC from Single-Cell Transcriptomics of Peripheral Blood.
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Cao Y, Chang T, Schischlik F, Wang K, Sinha S, Hannenhalli S, Jiang P, and Ruppin E
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- Humans, Leukocytes, Mononuclear immunology, Leukocytes, Mononuclear metabolism, Biomarkers, Tumor blood, Biomarkers, Tumor genetics, Immunotherapy methods, Prognosis, Gene Expression Profiling methods, Male, Tumor Microenvironment immunology, Tumor Microenvironment genetics, Single-Cell Analysis methods, Squamous Cell Carcinoma of Head and Neck immunology, Squamous Cell Carcinoma of Head and Neck genetics, Squamous Cell Carcinoma of Head and Neck blood, Squamous Cell Carcinoma of Head and Neck pathology, Transcriptome, Head and Neck Neoplasms immunology, Head and Neck Neoplasms genetics, Head and Neck Neoplasms blood, Head and Neck Neoplasms pathology
- Abstract
In this study, we explore the possibility of inferring characteristics of the tumor immune microenvironment from the blood. Specifically, we investigate two datasets of patients with head and neck squamous cell carcinoma with matched single-cell RNA sequencing (scRNA-seq) from peripheral blood mononuclear cells (PBMCs) and tumor tissues. Our analysis shows that the immune cell fractions and gene expression profiles of various immune cells within the tumor microenvironment can be inferred from the matched PBMC scRNA-seq data. We find that the established exhausted T-cell signature can be predicted from the blood and serve as a valuable prognostic blood biomarker of immunotherapy response. Additionally, our study reveals that the inferred ratio between tumor memory B- and regulatory T-cell fractions is predictive of immunotherapy response and is superior to the well-established cytolytic and exhausted T-cell signatures. These results highlight the promising potential of PBMC scRNA-seq in cancer immunotherapy and warrant, and will hopefully facilitate, further investigations on a larger scale. The code for predicting tumor immune microenvironment from PBMC scRNA-seq, TIMEP, is provided, offering other researchers the opportunity to investigate its prospective applications in various other indications., Significance: Our work offers a new and promising paradigm in liquid biopsies to unlock the power of blood single-cell transcriptomics in cancer immunotherapy., (©2024 The Authors; Published by the American Association for Cancer Research.)
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- 2024
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49. Challenges and Opportunities in Awake Craniotomy for Brain Tumor Surgery in Low- and Lower-Middle-Income Countries: A Narrative Review and Perspective.
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Pascual JSG, de Lotbiniere-Bassett M, Khu KJO, Starreveld YP, Lama S, Legaspi GD, Berger MS, Duffau H, and Sutherland GR
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- Humans, Neurosurgical Procedures methods, Brain Neoplasms surgery, Craniotomy methods, Developing Countries, Wakefulness
- Abstract
Background: Low-income countries (LICs) and lower-middle-income countries (LMICs) are presented with unique challenges and opportunities when performing awake craniotomy (AC) for brain tumors. These circumstances arise from factors that are financial, infrastructural, educational, personnel, and sociocultural in nature., Methods: We performed a systematic narrative review of series on AC for intra-axial brain tumors in LICs/LMICs using Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines, focusing on the challenges and opportunities in these settings. The PubMed, Scopus, and Web of Science databases were searched., Results: After initially identifying 74 studies, inclusion-exclusion criteria were applied, leaving a total of 14 studies included in the review. These involved 409 patients who underwent AC in LICs/LMICs. These series were from India, Ghana, Nigeria, Iran, Pakistan, Morocco, the Philippines, and Egypt. The most common pathology encountered were gliomas (10-70%). Most studies (11/14, 78.5%) reported on their technique of cortical-subcortical mapping. All reported on motor mapping and 8 of these performed language mapping. The most common outcomes reported were seizure and neurologic deficits, and longest follow-up was at 1 year. Challenges noted were lack of equipment and trained personnel, need for validated tests for the local setting, and sociocultural factors. Opportunities identified were volume for training, technique innovation, and international collaboration., Conclusions: There are numerous challenges and opportunities that arise when performing AC in LICs/LMICs. A collaborative approach toward harnessing the opportunities, and seeking creative solutions to address the challenges, would provide an ideal mechanism toward advancing neurosurgical care and specialty worldwide., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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50. A deep-learning framework to predict cancer treatment response from histopathology images through imputed transcriptomics.
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Hoang DT, Dinstag G, Shulman ED, Hermida LC, Ben-Zvi DS, Elis E, Caley K, Sammut SJ, Sinha S, Sinha N, Dampier CH, Stossel C, Patil T, Rajan A, Lassoued W, Strauss J, Bailey S, Allen C, Redman J, Beker T, Jiang P, Golan T, Wilkinson S, Sowalsky AG, Pine SR, Caldas C, Gulley JL, Aldape K, Aharonov R, Stone EA, and Ruppin E
- Subjects
- Humans, Gene Expression Profiling methods, Treatment Outcome, Precision Medicine methods, Deep Learning, Neoplasms genetics, Neoplasms pathology, Neoplasms therapy, Transcriptome
- Abstract
Advances in artificial intelligence have paved the way for leveraging hematoxylin and eosin-stained tumor slides for precision oncology. We present ENLIGHT-DeepPT, an indirect two-step approach consisting of (1) DeepPT, a deep-learning framework that predicts genome-wide tumor mRNA expression from slides, and (2) ENLIGHT, which predicts response to targeted and immune therapies from the inferred expression values. We show that DeepPT successfully predicts transcriptomics in all 16 The Cancer Genome Atlas cohorts tested and generalizes well to two independent datasets. ENLIGHT-DeepPT successfully predicts true responders in five independent patient cohorts involving four different treatments spanning six cancer types, with an overall odds ratio of 2.28 and a 39.5% increased response rate among predicted responders versus the baseline rate. Notably, its prediction accuracy, obtained without any training on the treatment data, is comparable to that achieved by directly predicting the response from the images, which requires specific training on the treatment evaluation cohorts., (© 2024. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
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- 2024
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