35 results on '"Sanches T"'
Search Results
2. Hepatocellular carcinoma in a free‐living marmoset (Callithrix sp.) with concomitant biliary trematodiasis
- Author
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Díaz‐Delgado, J., Sanches, T. C., dos Santos‐Cirqueira, C., Coimbra, A. A. C., Guerra, J. M., Joppert, A., Di Loretto, C., Rizardi, M. B., Sansone, M., Nagamori, F. O., Gonçalves, P. S., Ressio, R., Iglezias, S., Fernandes, N. C. C. A., Kanamura, C., Groch, K. R., and Catão‐Dias, J. L.
- Published
- 2018
- Full Text
- View/download PDF
3. Environmental DNA Methods for Ecological Monitoring and Biodiversity Assessment in Estuaries
- Author
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Nagarajan, RP, Nagarajan, RP, Bedwell, M, Holmes, AE, Sanches, T, Acuña, S, Baerwald, M, Barnes, MA, Blankenship, S, Connon, RE, Deiner, K, Gille, D, Goldberg, CS, Hunter, ME, Jerde, CL, Luikart, G, Meyer, RS, Watts, A, Schreier, A, Nagarajan, RP, Nagarajan, RP, Bedwell, M, Holmes, AE, Sanches, T, Acuña, S, Baerwald, M, Barnes, MA, Blankenship, S, Connon, RE, Deiner, K, Gille, D, Goldberg, CS, Hunter, ME, Jerde, CL, Luikart, G, Meyer, RS, Watts, A, and Schreier, A
- Abstract
Environmental DNA (eDNA) detection methods can complement traditional biomonitoring to yield new ecological insights in aquatic systems. However, the conceptual and methodological frameworks for aquatic eDNA detection and interpretation were developed primarily in freshwater environments and have not been well established for estuaries and marine environments that are by nature dynamic, turbid, and hydrologically complex. Environmental context and species life history are critical for successful application of eDNA methods, and the challenges associated with eDNA detection in estuaries were the subject of a symposium held at the University of California Davis on January 29, 2020 (https://marinescience.ucdavis.edu/engagement/past-events/edna). Here, we elaborate upon topics addressed in the symposium to evaluate eDNA methods in the context of monitoring and biodiversity studies in estuaries. We first provide a concise overview of eDNA science and methods, and then examine the San Francisco Estuary (SFE) as a case study to illustrate how eDNA detection can complement traditional monitoring programs and provide regional guidance on future potential eDNA applications. Additionally, we offer recommendations for enhancing communication between eDNA scientists and natural resource managers, which is essential for integrating eDNA methods into existing monitoring programs. Our intent is to create a resource that is accessible to those outside the field of eDNA, especially managers, without oversimplifying the challenges or advantages of these methods.
- Published
- 2022
4. Publishing within open science challenges
- Author
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Da Luz Antunes, M., Sanches, T., Carlos Lopes, and Alonso-Arévalo, J.
- Subjects
Academic writing ,Open data ,Predatory journals ,Open science ,Open access - Abstract
This chapter relates the diffusion of scientific knowledge, materialized in its writing, publication, and circulation, with the Open Science. Open Science is, by its nature, a platform for dialogue, fostering more exchanges and stimulating researchers to adapt their publishing and dissemination practices, leading to cost reduction and enhancement of academic content and fostering greater circulation and knowledge generation. The purpose is the accomplishment of proposals regarding the actions that researchers must take in the scope of scholarship as conversation, namely, embedding academic writing in Open Science and sharing research data and results. Finally, we reflect on current Open Science challenges to researchers and academia. info:eu-repo/semantics/publishedVersion
- Published
- 2019
5. Antral follicle population in prepubertal and pubertal heifers
- Author
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Seneda, M. M., primary, Morotti, F., additional, Zangirolamo, A. F., additional, da Silva, N. C., additional, Sanches, T. K., additional, Blaschi, W., additional, and Barreiros, T. R. R., additional
- Published
- 2019
- Full Text
- View/download PDF
6. Hepatocellular carcinoma in a free‐living marmoset (Callithrix sp.) with concomitant biliary trematodiasis
- Author
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Díaz‐Delgado, J., primary, Sanches, T. C., additional, dos Santos‐Cirqueira, C., additional, Coimbra, A. A. C., additional, Guerra, J. M., additional, Joppert, A., additional, Di Loretto, C., additional, Rizardi, M. B., additional, Sansone, M., additional, Nagamori, F. O., additional, Gonçalves, P. S., additional, Ressio, R., additional, Iglezias, S., additional, Fernandes, N. C. C. A., additional, Kanamura, C., additional, Groch, K. R., additional, and Catão‐Dias, J. L., additional
- Published
- 2017
- Full Text
- View/download PDF
7. DIVERSIDADE DE CARRAPATOS (ACARI: IXODIDAE) EM ANIMAIS SILVESTRES RECEBIDOS PELO ZOOLÓGICO MUNICIPAL DE GUARULHOS
- Author
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MARTINS, T. F., primary, IGAYARA-SOUZA, C. A., additional, SANCHES, T. C., additional, MELO, M. A., additional, BOLOCHIO, C. E., additional, NAGAHAMA, A. A., additional, HIDASI, H. W., additional, PENIDO JUNIOR, G. N., additional, ACOSTA, I. C. L., additional, MUÑOZ-LEAL, S., additional, and LABRUNA, M. B., additional
- Published
- 2017
- Full Text
- View/download PDF
8. Recuento de folículos antrales en bovinos:ventajas, desafíos y datos controvertidosen IA y producción de embriones.
- Author
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Zangirolamo, A. F., Souza, A.K., Bergamo, L. Z., Sanches, T. K., da Silva, N. C., and Seneda, M. M.
- Subjects
BOS ,ANIMAL reproduction ,BIOTECHNOLOGY ,ARTIFICIAL insemination ,CATTLE fertility - Abstract
Copyright of Taurus is the property of Revista Taurus and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2019
9. Multicentric cutaneous keratoacanthomas in a free‐living marmoset (<italic>Callithrix</italic> sp.).
- Author
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Díaz‐Delgado, J., Sanches, T. C., Cirqueira, C. S., Coimbra, A. A. C., Guerra, J. M., Olivares, V., Di Loretto, C., Ressio, R. A., Iglezias, S., Fernandes, N. C. C. A., Kanamura, C., Groch, K. R., and Catão‐Dias, J. L.
- Subjects
- *
KERATOACANTHOMA , *CALLITHRIX , *PAPILLOMAVIRUSES , *IMMUNOHISTOCHEMISTRY , *HERPESVIRUS diseases - Abstract
Abstract: Cutaneous neoplasia is common in non‐human primates. We describe the gross and microscopic features of multicentric cutaneous keratoacanthomas in a free‐living marmoset (
Callithrix sp.). Immunohistochemistry for human papillomavirus and herpes simplex virus type I and simplex virus type II was negative. Keratoacanthomas should be included in the differential diagnosis for cutaneous masses in non‐human primates. [ABSTRACT FROM AUTHOR]- Published
- 2018
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- View/download PDF
10. Hepatocellular carcinoma in a free‐living marmoset (<italic>Callithrix</italic> sp.) with concomitant biliary trematodiasis.
- Author
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Díaz‐Delgado, J., Sanches, T. C., dos Santos‐Cirqueira, C., Coimbra, A. A. C., Guerra, J. M., Joppert, A., Di Loretto, C., Rizardi, M. B., Sansone, M., Nagamori, F. O., Gonçalves, P. S., Ressio, R., Iglezias, S., Fernandes, N. C. C. A., Kanamura, C., Groch, K. R., and Catão‐Dias, J. L.
- Subjects
- *
LIVER cancer , *MARMOSETS , *IMMUNOHISTOCHEMISTRY , *TREMATODA , *PRIMATOLOGY - Abstract
Abstract: Hepatocellular carcinoma (HCC) is rare in New World primates. We report the gross, microscopical, and immunocytochemical features of a spontaneous HCC in a free‐living marmoset (
Callithrix sp.). Hepatitis B and C virus and aflatoxin immunohistochemistry were negative; however, concomitant intra‐ and extrahepatic biliary trematodiasis could have played a role. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
- View/download PDF
11. Effect of enzymatic pretreatment on the anaerobic digestion of milk fat for biogas production
- Author
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Domingues, R.F., primary, Sanches, T., additional, Silva, G.S., additional, Bueno, B.E., additional, Ribeiro, R., additional, Kamimura, E.S., additional, Franzolin Neto, R., additional, and Tommaso, G., additional
- Published
- 2015
- Full Text
- View/download PDF
12. CLINICAL ACUTE KIDNEY INJURY 2
- Author
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Gonzalez Sanchidrian, S., primary, Cebrian Andrada, C. J., additional, Jimenez Herrero, M. C., additional, Deira Lorenzo, J. L., additional, Labrador Gomez, P. J., additional, Marin Alvarez, J. P., additional, Garcia-Bernalt Funes, V., additional, Gallego Dominguez, S., additional, Castellano Cervino, I., additional, Gomez-Martino Arroyo, J. R., additional, Parapiboon, W., additional, Boonsom, P., additional, Stadler, T., additional, Raddatz, A., additional, Poppleton, A., additional, Hubner, W., additional, Fliser, D., additional, Klingele, M., additional, Rosa, J., additional, Sydor, A., additional, Krzanowski, M., additional, Chowaniec, E., additional, Sulowicz, W., additional, Vidal, E., additional, Mergulhao, C., additional, Pinheiro, H., additional, Sette, L., additional, Amorim, G., additional, Fernandes, G., additional, Valente, L., additional, Ouaddi, F., additional, Tazi, I., additional, Mabrouk, K., additional, Zamd, M., additional, El Khayat, S., additional, Medkouri, G., additional, Benghanem, M., additional, Ramdani, B., additional, Dabo, G., additional, Badaoui, L., additional, Ouled Lahcen, A., additional, Sosqi, M., additional, Marih, L., additional, Chakib, A., additional, Marhoum El Filali, K., additional, Oliveira, M. J. C., additional, Silva Junior, G., additional, Sampaio, A. M., additional, Montenegro, B., additional, Alves, M. P., additional, Henn, G. A. L., additional, Rocha, H. A. L., additional, Meneses, G. C., additional, Martins, A. M. C., additional, Sanches, T. R., additional, Andrade, L. C., additional, Seguro, A. C., additional, Liborio, A. B., additional, Daher, E. F., additional, Haase, M., additional, Robra, B.-P., additional, Hoffmann, J., additional, Isermann, B., additional, Henkel, W., additional, Bellomo, R., additional, Ronco, C., additional, Haase-Fielitz, A., additional, Kee, Y. K., additional, Kim, Y. L., additional, Kim, E. J., additional, Park, J. T., additional, Han, S. H., additional, Yoo, T.-H., additional, Kang, S.-W., additional, Choi, K. H., additional, Oh, H. J., additional, Dharmendra, P., additional, Vinay, M., additional, Mohit, M., additional, Rajesh, G., additional, Dhananjai, A., additional, Pankaj, B., additional, Campos, P., additional, Pires, A., additional, Inchaustegui, L., additional, Avdoshina, S., additional, Villevalde, S., additional, Kobalava, Z., additional, Mukhopadhyay, P., additional, Das, B., additional, Mukherjee, D., additional, Mishra, R., additional, Kar, M., additional, Biswas, N. M., additional, Onuigbo, M., additional, Agbasi, N., additional, Ponce, D., additional, Albino, B. B., additional, Balbi, A. L., additional, Klin, P., additional, Zambrano, C., additional, Gutierrez, L. M., additional, Varela Falcon, L., additional, Zeppa, F., additional, Bilbao, A., additional, Klein, F., additional, Raffaele, P., additional, Chang, K. Y., additional, Park, H. S., additional, Kim, H. W., additional, Choi, B. S., additional, Park, C. W., additional, Yang, C. W., additional, Jin, D. C., additional, Checherita, I.-A., additional, Peride, I., additional, David, C., additional, Radulescu, D., additional, Ciocalteu, A., additional, Niculae, A., additional, Balbi, A., additional, Goes, C., additional, Buffarah, M., additional, Xavier, P., additional, Karimi, S. M., additional, Cserep, G., additional, Gannon, D., additional, Sinnamon, K., additional, Saudan, P., additional, Alves, C., additional, De La Fuente, V., additional, Ponte, B., additional, Carballo, S., additional, Rutschmann, O., additional, Martin, P.-Y., additional, Stucker, F., additional, Saurina, A., additional, Pardo, V., additional, Barba, N., additional, Jovell, E., additional, Pou, M., additional, Esteve, V., additional, Fulquet, M., additional, Duarte, V., additional, Ramirez De Arellano, M., additional, Sun, I. O., additional, Yoon, H. J., additional, Kim, J. G., additional, Lee, K. Y., additional, Tiranathanagul, K., additional, Sallapant, S., additional, Eiam-Ong, S., additional, Treeprasertsuk, S., additional, Checherita, I. A., additional, Geavlete, B., additional, Ando, M., additional, Shingai, N., additional, Morito, T., additional, Ohashi, K., additional, Nitta, K., additional, Duarte, D. B., additional, Vanderlei, L. A., additional, Bispo, R. K. A., additional, Pinheiro, M. E., additional, Si Nga, H., additional, Paes, A., additional, Medeiros, P., additional, Gentil, T. M. S., additional, Assis, L. S., additional, Amaral, A. P., additional, Alvares, V. R. C. A., additional, Scaranello, K. L. R. S., additional, Soeiro, E. M. D., additional, Castanho, V., additional, Castro, I., additional, Laranja, S. M., additional, Barreto, S., additional, Molina, M., additional, Silvisk, M., additional, Pereira, B. J., additional, Izem, A., additional, Amer Mhamed, D., additional, El Khayat, S. S., additional, Donadio, C., additional, Klimenko, A., additional, Andreoli, M. C., additional, Souza, N. K., additional, Ammirati, A. L., additional, Matsui, T. N., additional, Naka, E. L., additional, Carneiro, F. D., additional, Ramos, A. C., additional, Lopes, R. K., additional, Dias, E. S., additional, Coelho, M. P., additional, Afonso, R. C., additional, Ferraz-Neto, B.-H., additional, Almeida, M. D., additional, Durao, M., additional, Batista, M. C., additional, Monte, J. C., additional, Pereira, V. G., additional, Santos, O. P., additional, Santos, B. C., additional, Silva, V. C., additional, Raimann, J. G., additional, Nerbass, F. B., additional, Vieira, M. A., additional, Dabel, P., additional, Richter, A., additional, Callegari, J., additional, Carter, M., additional, Levin, N. W., additional, Winchester, J. F., additional, Kotanko, P., additional, Pecoits-Filho, R., additional, Gjyzari, A., additional, Thereska, N., additional, Barbullushi, M., additional, Koroshi, A., additional, Petrela, E., additional, Mumajesi, S., additional, Han, J. S., additional, Simone, S., additional, Scrascia, G., additional, Montemurno, E., additional, Rotunno, C., additional, Mastro, F., additional, Gesualdo, L., additional, Paparella, D., additional, Pertosa, G., additional, Lopes, D., additional, Santos, C., additional, Cunha, C., additional, Gomes, A. M., additional, Coelho, H., additional, Seabra, J., additional, Qasem, A., additional, Farag, S., additional, Hamed, E., additional, Emara, M., additional, Bihery, A., additional, Pasha, H., additional, Chhaya, S., additional, Mukhopadhyay, G., additional, Das, C., additional, Vieira, A. P. F., additional, Lima, L. L. L., additional, Nascimento, L. S., additional, Zawiasa, A., additional, Ko Odziejska, M., additional, Bia Asiewicz, P., additional, Nowak, D., additional, and Nowicki, M., additional
- Published
- 2014
- Full Text
- View/download PDF
13. N-acetylcysteine protects against renal injury following bilateral ureteral obstruction
- Author
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Shimizu, M. H. M., primary, Danilovic, A., additional, Andrade, L., additional, Volpini, R. A., additional, Liborio, A. B., additional, Sanches, T. R.C., additional, and Seguro, A. C., additional
- Published
- 2008
- Full Text
- View/download PDF
14. Consumer Behavior after the Brazilian Power Rationing in 2001
- Author
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Carreno, E., primary, Sanches, T., additional, and Padilha-Feltrin, A., additional
- Published
- 2006
- Full Text
- View/download PDF
15. Foraminíferos Recentes do Canal de São Sebastião SP, e suas Relações com os Padrões de Sedimentação
- Author
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EICHLER, B. B., primary, DULEBA, W., additional, SOUSA, S. H. M., additional, FURTADO, V. V., additional, MAHIQUES, M. M., additional, and SANCHES, T. M., additional
- Published
- 1995
- Full Text
- View/download PDF
16. Chá verde aumenta a excreção urinaria de magnésio, fosforo e calcio em ratos.
- Author
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Helou, C. M. B., Silva, I. O., Sanches, T. R., and Andrade, L. C.
- Published
- 2017
17. Efeitos da propolis na proteção da injuria renal aguda e na lesão pulmonar em modelo animal de sepse.
- Author
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Silveira, M. D., Andrade, L. C., Capcha, J. C., Sanches, T. R., Moreira, R. S., Shimizu, M. H., Margoth, M., and Teles, F.
- Published
- 2017
18. Efeito protetor do peptídeo mimético 4F da apolipoproteína A-I na lesão renal, cardíaca e na disfunção endotelial induzida pelo infarto agudo do miocárdio em ratos hipercolesterolêmicos que receberam contraste iodado
- Author
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Moreira, R. S., Irigoyen, M. C. C., Sanches, T. R., Captcha, J. M., Gutierrez, P. S., Noronha, I. L., and Andrade, L. C.
- Published
- 2017
19. Education and psychology trends: Impact on information literacy
- Author
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Sanches, T., Carlos Lopes, and Da Luz Antunes, M.
20. Architecture and morphology of a scientific article
- Author
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Lopes, C., Maria Luz Antunes, and Sanches, T.
- Subjects
Publishing ,Scientific article ,Science communication - Abstract
The overview of the scientific articles follows a structure established either by the editorial tradition and scientific ethics or as a result of the consolidated experience of communication in science. This architectural and morphological structure, worked for the purpose of publication, challenges the new authors in several ways, which serve as a motto and guide for this chapter: Why publish?; Publish yes, but where?; Improve the chances of acceptance; What writing style do you use?; How to organize writing? What to consider before submitting?; and finally, How to proceed if the article is rejected? The ideas expressed here serve as practical indications that show important strategies for publishing scientific articles. info:eu-repo/semantics/draft
21. Publishing within open science challenges
- Author
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Da Luz Antunes, M., Sanches, T., Carlos Lopes, and Alonso-Arévalo, J.
22. A single sensor hand biometric multimodal system
- Author
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Sanches, T., Antunes, J., and Paulo Correia
- Abstract
Publication in the conference proceedings of EUSIPCO, Poznan, Poland, 2007
23. Renal function evaluation in patients with American Cutaneous Leishmaniasis after specific treatment with pentavalent antimonial
- Author
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Oliveira Rodrigo A, Lima Cláudio G, Mota Rosa, Martins Alice, Sanches Talita R, Seguro Antônio C, Andrade Lúcia C, Junior Geraldo, Libório Alexandre B, and Daher Elizabeth F
- Subjects
American cutaneous leishmaniasis ,Renal function ,Tubular defects ,Treatment ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Background Renal evaluation studies are rare in American Cutaneous Leishmaniasis (ACL). The aim of this study is to investigate whether specific treatment reverts ACL-associated renal dysfunction. Methods A prospective study was conducted with 37 patients with ACL. Urinary concentrating and acidification ability was assessed before and after treatment with pentavalent antimonial. Results The patients mean age was 35.6 ± 12 years and 19 were male. Before treatment, urinary concentrating defect (U/Posm Conclusion As previously described, urinary concentrating and acidification defects were found in an important number of patients with ACL. Present results demonstrate that only some patients recover urinary acidification capacity, while no one returned to normal urinary concentration capacity.
- Published
- 2012
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- View/download PDF
24. Y and mitochondrial chromosomes in the heterogeneous stock rat population.
- Author
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Okamoto F, Chitre AS, Missfeldt Sanches T, Chen D, Munro D, Aron AT, Beeson A, Bimschleger HV, Eid M, Garcia Martinez AG, Han W, Holl K, Jackson T, Johnson BB, King CP, Kuhn BN, Lamparelli AC, Netzley AH, Nguyen KH, Peng BF, Tripi JA, Wang T, Ziegler KS, Adams DJ, Baud A, Carrette LLG, Chen H, de Guglielmo G, Dorrestein P, George O, Ishiwari K, Jablonski MM, Jhou TC, Kallupi M, Knight R, Meyer PJ, Solberg Woods LC, Polesskaya O, and Palmer AA
- Subjects
- Animals, Rats, Male, Genome-Wide Association Study, Female, Genotype, Y Chromosome genetics, Mitochondria genetics
- Abstract
Genome-wide association studies typically evaluate the autosomes and sometimes the X Chromosome, but seldom consider the Y or mitochondrial (MT) Chromosomes. We genotyped the Y and MT Chromosomes in heterogeneous stock (HS) rats (Rattus norvegicus), an outbred population created from 8 inbred strains. We identified 8 distinct Y and 4 distinct MT Chromosomes among the 8 founders. However, only 2 types of each nonrecombinant chromosome were observed in our modern HS rat population (generations 81-97). Despite the relatively large sample size, there were virtually no significant associations for behavioral, physiological, metabolome, or microbiome traits after correcting for multiple comparisons. However, both Y and MT Chromosomes were strongly associated with the expression of a few genes located on those chromosomes, which provided a positive control. Our results suggest that within modern HS rats there are no Y and MT Chromosomes differences that strongly influence behavioral or physiological traits. These results do not address other ancestral Y and MT Chromosomes that do not appear in modern HS rats, nor do they address effects that may exist in other rat populations, or in other species., Competing Interests: Conflicts of interest RK is a scientific advisory board member, and consultant for BiomeSense, Inc., has equity and receives income. He is a scientific advisory board member and has equity in GenCirq. He is a consultant for DayTwo, and receives income. He has equity in and acts as a consultant for Cybele. He is a co-founder of Biota, Inc., and has equity. He is a cofounder of Micronoma, and has equity and is a scientific advisory board member. The terms of these arrangements have been reviewed and approved by the University of California, San Diego in accordance with its conflict of interest policies., (© The Author(s) 2024. Published by Oxford University Press on behalf of The Genetics Society of America.)
- Published
- 2024
- Full Text
- View/download PDF
25. Genomic Loci Influencing Cue-Reactivity in Heterogeneous Stock Rats.
- Author
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King CP, Chitre AS, Leal-Gutiérrez JD, Tripi JA, Hughson AR, Horvath AP, Lamparelli AC, George A, Martin C, Pierre CLS, Sanches T, Bimschleger HV, Gao J, Cheng R, Nguyen KM, Holl KL, Polesskaya O, Ishiwari K, Chen H, Woods LCS, Palmer AA, Robinson TE, Flagel SB, and Meyer PJ
- Abstract
Addiction vulnerability is associated with the tendency to attribute incentive salience to reward predictive cues; both addiction and the attribution of incentive salience are influenced by environmental and genetic factors. To characterize the genetic contributions to incentive salience attribution, we performed a genome-wide association study (GWAS) in a cohort of 1,645 genetically diverse heterogeneous stock (HS) rats. We tested HS rats in a Pavlovian conditioned approach task, in which we characterized the individual responses to food-associated stimuli ("cues"). Rats exhibited either cue-directed "sign-tracking" behavior or food-cup directed "goal-tracking" behavior. We then used the conditioned reinforcement procedure to determine whether rats would perform a novel operant response for unrewarded presentations of the cue. We found that these measures were moderately heritable (SNP heritability, h
2 = .189-.215). GWAS identified 14 quantitative trait loci (QTLs) for 11 of the 12 traits we examined. Interval sizes of these QTLs varied widely. 7 traits shared a QTL on chromosome 1 that contained a few genes ( e.g. Tenm4, Mir708 ) that have been associated with substance use disorders and other mental health traits in humans. Other candidate genes ( e.g. Wnt11, Pak1 ) in this region had coding variants and expression-QTLs in mesocorticolimbic regions of the brain. We also conducted a Phenome-Wide Association Study (PheWAS) on other behavioral measures in HS rats and found that regions containing QTLs on chromosome 1 were also associated with nicotine self-administration in a separate cohort of HS rats. These results provide a starting point for the molecular genetic dissection of incentive salience and provide further support for a relationship between attribution of incentive salience and drug abuse-related traits.- Published
- 2024
- Full Text
- View/download PDF
26. Genome-wide association study of delay discounting in Heterogenous Stock rats.
- Author
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Lara MK, Chitre AS, Chen D, Johnson BB, Nguyen KM, Cohen KA, Muckadam SA, Lin B, Ziegler S, Beeson A, Sanches T, Solberg Woods LC, Polesskaya O, Palmer AA, and Mitchell SH
- Abstract
Delay discounting refers to the behavioral tendency to devalue rewards as a function of their delay in receipt. Heightened delay discounting has been associated with substance use disorders, as well as multiple co-occurring psychopathologies. Genetic studies in humans and animal models have established that delay discounting is a heritable trait, but only a few specific genes have been associated with delay discounting. Here, we aimed to identify novel genetic loci associated with delay discounting through a genome-wide association study (GWAS) using Heterogenous Stock rats, a genetically diverse outbred population derived from eight inbred founder strains. We assessed delay discounting in 650 male and female rats using an adjusting amount procedure in which rats chose between smaller immediate sucrose rewards or a larger reward at variable delays. Preference switch points were calculated for each rat and both exponential and hyperbolic functions were fitted to these indifference points. Area under the curve (AUC) and the discounting parameter k of both functions were used as delay discounting measures. GWAS for AUC, exponential k , and indifference points for a short delay identified significant loci on chromosomes 20 and 14. The gene Slc35f1, which encodes a member of the solute carrier family of nucleoside sugar transporters, was the only gene within the chromosome 20 locus. That locus also contained an eQTL for Slc35f1 , suggesting that heritable differences in the expression of that gene might be responsible for the association with behavior. The gene Adgrl3 , which encodes a member of the latrophilin family of G-protein coupled receptors, was the only gene within the chromosome 14 locus. These findings implicate novel genes in delay discounting and highlight the need for further exploration.
- Published
- 2023
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- View/download PDF
27. Y and Mitochondrial Chromosomes in the Heterogeneous Stock Rat Population.
- Author
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Okamoto F, Chitre AS, Missfeldt Sanches T, Chen D, Munro D, Polesskaya O, and Palmer AA
- Abstract
Genome-wide association studies typically evaluate the autosomes and sometimes the X Chromosome, but seldom consider the Y or mitochondrial Chromosomes. We genotyped the Y and mitochondrial chromosomes in heterogeneous stock rats ( Rattus norvegicus ), which were created in 1984 by intercrossing eight inbred strains and have subsequently been maintained as an outbred population for 100 generations. As the Y and mitochondrial Chromosomes do not recombine, we determined which founder had contributed these chromosomes for each rat, and then performed association analysis for all complex traits (n=12,055; intersection of 12,116 phenotyped and 15,042 haplotyped rats). We found the eight founders had 8 distinct Y and 4 distinct mitochondrial Chromosomes, however only two of each were observed in our modern heterogeneous stock rat population (Generations 81-97). Despite the unusually large sample size, the p-value distribution did not deviate from expectations; there were no significant associations for behavioral, physiological, metabolome, or microbiome traits after correcting for multiple comparisons. However, both Y and mitochondrial Chromosomes were strongly associated with expression of a few genes located on those chromosomes, which provided a positive control. Our results suggest that within modern heterogeneous stock rats there are no Y and mitochondrial Chromosomes differences that strongly influence behavioral or physiological traits. These results do not address other ancestral Y and mitochondrial Chromosomes that do not appear in modern heterogeneous stock rats, nor do they address effects that may exist in other rat populations, or in other species., Competing Interests: Conflict of Interest: The authors declare no conflict of interest.
- Published
- 2023
- Full Text
- View/download PDF
28. To Bag or Not to Bag? How AudioMoth-Based Passive Acoustic Monitoring Is Impacted by Protective Coverings.
- Author
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Osborne PE, Alvares-Sanches T, and White PR
- Abstract
Bare board AudioMoth recorders offer a low-cost, open-source solution to passive acoustic monitoring (PAM) but need protecting in an enclosure. We were concerned that the choice of enclosure may alter the spectral characteristics of recordings. We focus on polythene bags as the simplest enclosure and assess how their use affects acoustic metrics. Using an anechoic chamber, a series of pure sinusoidal tones from 100 Hz to 20 kHz were recorded on 10 AudioMoth devices and a calibrated Class 1 sound level meter. The recordings were made on bare board AudioMoth devices, as well as after covering them with different bags. Linear phase finite impulse response filters were designed to replicate the frequency response functions between the incident pressure wave and the recorded signals. We applied these filters to ~1000 sound recordings to assess the effects of the AudioMoth and the bags on 19 acoustic metrics. While bare board AudioMoth showed very consistent spectral responses with accentuation in the higher frequencies, bag enclosures led to significant and erratic attenuation inconsistent between frequencies. Few acoustic metrics were insensitive to this uncertainty, rendering index comparisons unreliable. Biases due to enclosures on PAM devices may need to be considered when choosing appropriate acoustic indices for ecological studies. Archived recordings without adequate metadata may potentially produce biased acoustic index values and should be treated cautiously.
- Published
- 2023
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29. Disseminated Mucor indicus infection in a marmoset (Callithrix sp.).
- Author
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Ferreira-Machado E, Ervedosa TB, Navas-Suárez PE, Figueiredo KB, de Carvalho ACSR, Takahashi JPF, de Araújo LT, de Jesus IP, de Carvalho J, Sanches T, de Azevedo Fernandes NCC, and Guerra JM
- Subjects
- Animals, Mucor, Callithrix, Mucormycosis diagnosis, Mucormycosis veterinary
- Abstract
Mucormycosis is rarely described in Platyrrhines. Herein, we describe the pathologic and molecular features of a gastric and hepatic infection by Mucor indicus in a marmoset (Callithrix sp.)., (© 2023 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
30. Mobile surveys and machine learning can improve urban noise mapping: Beyond A-weighted measurements of exposure.
- Author
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Alvares-Sanches T, Osborne PE, and White PR
- Abstract
Urban noise pollution is a major environmental issue, second only to fine particulate matter in its impacts on physical and mental health. To identify who is affected and where to prioritise actions, noise maps derived from traffic flows and propagation algorithms are widely used. These may not reflect true levels of exposure because they fail to consider noise from all sources and may leave gaps where roads or traffic data are absent. We present an improved approach to overcome these limitations. Using walking surveys, we recorded 52,366 audio clips of 10 s each along 733 km of routes throughout the port city of Southampton. We extracted power levels in low (11 to 177 Hz), mid (177 Hz to 5.68 kHz), high (5.68 to 22.72 kHz) and A-weighted frequencies and then built machine-learning (ML) models to predict noise levels at 30 m resolution across the entire city, driven by urban form. Model performance (r
2 ) ranged from 0.41 (low frequencies) to 0.61 (mid frequencies) with mean absolute errors of 4.05 to 4.75 dB. The main predictors of noise were related to modes of transport (road, air, rail and water) but for low frequencies, port activities were also important. When mapped to the city scale, A-weighted frequencies produced a similar spatial pattern to mid-frequencies, but did not capture the major sources of low frequency noise from the port or scattered hotspots of high frequencies. We question whether A-weighted noise mapping is adequate for health and wellbeing impact assessments. We conclude that mobile surveys combined with ML offer an alternative way to map noise from all sources and at fine resolution across entire cities that may more accurately reflect true exposures. Our approach is suitable for noise data gathered by citizen scientists, or from a network of sensors, as well as from structured surveys., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2021
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31. Osteopathic manipulative treatment combined with exercise improves pain and disability in individuals with non-specific chronic neck pain: A pragmatic randomized controlled trial.
- Author
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Groisman S, Malysz T, de Souza da Silva L, Rocha Ribeiro Sanches T, Camargo Bragante K, Locatelli F, Pontel Vigolo C, Vaccari S, Homercher Rosa Francisco C, Monteiro Steigleder S, and Jotz GP
- Subjects
- Adult, Exercise, Humans, Neck Pain therapy, Pain Measurement, Treatment Outcome, Chronic Pain therapy, Manipulation, Osteopathic
- Abstract
Purpose: To determine effectiveness of osteopathic manipulative treatment combined with stretching and strengthening exercises in the cervical region on pain and disability in individuals with non-specific chronic neck pain., Methods: 90 adults with non-specific chronic neck pain were randomized to either exercises group (EG, n = 45) or osteopathic manipulative treatment associated with exercises group (OMT/EG, n = 45). The primary outcomes were obtained by the use of Numeric Pain-Rating Scale (NPRS), Pressure Pain Threshold (PPT) and Neck Disability Index (NDI). Secondary outcomes included range of motion (ROM) for cervical spine rotation, Fear-Avoidance Beliefs Questionnaire Work/Physical Activity (FABQ-W/PA) and Pain-self efficacy at two different moments: baseline and 4 weeks after the first treatment. Techniques and dosages of OMT were selected pragmatically by a registered osteopath. Generalized Estimating Equations model (GEE), complemented by the Least Significant Difference (LSD) and the intention-to-treat analysis, was used to assess the clinical outcomes., Results: Analysis with GEE indicated that OMT/EG reduced pain and disability more than the EG alone after 4 weeks of treatment with statistically significant difference (p < 0,05), as well as cervical active rotation was significantly improved (p = 0.03). There were no between-group differences observed in Pressure Pain Threshold (PPT) measure, Fear-Avoidance Beliefs Questionnaire and Pain-self efficacy., Conclusion: The association between OMT and exercises reduces pain and improves functional disability more than only exercise for individuals with non-specific chronic neck pain., Competing Interests: Declaration of competing interest None., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2020
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32. Parotid Salivary Gland Basal Cell Adenocarcinoma in a Big-eared Opossum (Didelphis aurita).
- Author
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Díaz-Delgado J, Coimbra AAC, Dos Santos-Cirqueira C, Sanches TC, Guerra JM, de Oliveira AS, Di Loretto C, Zwarg T, Ressio R, Rivas L, Sansone M, Nagamori FO, Kanamura C, Gonçalves PS, Fernandes NCCA, Groch KR, and Catão-Dias JL
- Subjects
- Animals, Female, Adenocarcinoma veterinary, Didelphis, Parotid Neoplasms veterinary
- Abstract
The opossum (family Didelphidae) is a marsupial endemic to the Americas. Apart from the South American short-tailed opossum (Monodelphis domestica) and the Virginia opossum (Didelphis virginiana), there is considerable lack of knowledge about the health and diseases of most opossum species. Among these, the big-eared opossum (Didelphis aurita) is found in Argentina, Brazil and Paraguay. Natural and experimental studies have shown this species to be susceptible to infectious agents with zoonotic potential and the animals may play a role in transmission of such agents. However, neoplasia appears to be uncommon in this species. We describe the gross, microscopical and immunohistochemical features of a parotid salivary gland basal cell adenocarcinoma in a free-living big-eared opossum. This case represents the first report of salivary gland neoplasia in opossums., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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33. Antral follicle population in prepubertal and pubertal heifers.
- Author
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Seneda MM, Morotti F, Zangirolamo AF, da Silva NC, Sanches TK, Blaschi W, and Barreiros TRR
- Abstract
The antral follicle count (AFC) is an important tool in the selection of bovine females destined for biotechnology. However, little is known about AFC in prepubertal and pubertal heifers. Some challenges inherent to the physiology of young females must be considered to achieve efficient rates with different procedures, such as ovum pick-up and IVF. This paper covers some important topics about ovarian physiology related to the population of antral follicles and reproductive efficiency in young female cattle.
- Published
- 2018
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34. Glomerular filtration is reduced by high tidal volume ventilation in an in vivo healthy rat model.
- Author
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Luque A, Shimizu MH, Andrade L, Sanches TR, and Seguro AC
- Subjects
- Animals, Electrophoresis, Immunoblotting, Male, Rats, Rats, Wistar, Thiobarbituric Acid Reactive Substances, Glomerular Filtration Rate physiology, Kidney physiopathology, Respiration, Artificial adverse effects, Tidal Volume physiology
- Abstract
Mechanical ventilation has been associated with organ failure in patients with acute respiratory distress syndrome. The present study examines the effects of tidal volume (V(T)) on renal function using two V T values (8 and 27 mL/kg) in anesthetized, paralyzed and mechanically ventilated male Wistar rats. Animals were randomized into two groups of 6 rats each: V (T)8 (V(T), 8 mL/kg; 61.50 +/- 0.92 breaths/min; positive end-expiratory pressure, 3.0 cmH(2)O; peak airway pressure (PAW), 11.8 +/- 2.0 cmH(2)O), and V T27 (V(T), 27 mL/kg; 33.60 +/- 1.56 breaths/min; positive end-expiratory pressure, none, and PAW, 22.7 +/- 4.0 cmH(2)O). Throughout the experiment, mean PAW remained comparable between the two groups (6.33 +/- 0.21 vs 6.50 +/- 0.22 cmH(2)O). For rats in the V(T)27 group, inulin clearance (mL.min(-1).body weight(-1)) decreased acutely after 60 min of mechanical ventilation and even more significantly after 90 min, compared with baseline values (0.60 +/- 0.05 and 0.45 +/- 0.05 vs 0.95 +/- 0.07; P < 0.001), although there were no differences between groups in mean arterial pressure or gasometric variables. In the V(T)8 group, inulin clearance at 120 min of mechanical ventilation remained unchanged in relation to baseline values (0.72 +/- 0.03 vs 0.80 +/- 0.05). The V(T)8 and V(T)27 groups did not differ in terms of serum thiobarbituric acid reactive substances (3.97 +/- 0.27 vs 4.02 +/- 0.45 nmol/mL) or endothelial nitric oxide synthase expression (94.25 +/- 2.75 vs 96.25 +/- 2.39%). Our results show that glomerular filtration is acutely affected by high tidal volume ventilation but do not provide information about the mechanism.
- Published
- 2009
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35. Design and synthesis of novel nitrogen-containing polyhydroxylated aromatics as HIV-1 integrase inhibitors from caffeic acid phenethyl ester.
- Author
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Wang P, Liu C, Sanches T, Zhong Y, Liu B, Xiong J, Neamati N, and Zhao G
- Subjects
- Drug Design, HIV Integrase metabolism, HIV Integrase Inhibitors chemistry, HIV Integrase Inhibitors pharmacology, Humans, Nitrogen chemistry, Phenylethyl Alcohol chemistry, Structure-Activity Relationship, Caffeic Acids chemistry, HIV Integrase chemistry, HIV Integrase Inhibitors chemical synthesis, Phenylethyl Alcohol analogs & derivatives
- Abstract
A series of nitrogen-containing polyhydroxylated aromatics from caffeic acid phenethyl ester were designed and synthesized as HIV-1 integrase inhibitors. Most of these compounds exhibited potent inhibitory activities at micromolar concentrations against HIV-1 integrase in the 3'-end processing and the strand transfer. Their key structure-activity relationship was also discussed.
- Published
- 2009
- Full Text
- View/download PDF
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