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1. Index

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

3. References

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

5. Notes

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

8. 10. The Xav

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

12. Preface and Acknowledgments

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

14. 1. Introduction

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

15. List of Abbreviations

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

16. Guide to Pronunciation of Xav

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

17. Foreword

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

18. List of Tables

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

19. List of Figures

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

20. Contents

Author

Coimbra, Carlos E. A. (Jr.), Flowers, Nancy M., Salzano, Francisco M., and Santos, Ricardo V.

Published
2002

23. Reconstructing Native American population history

Author

Reich, David, Patterson, Nick, Campbell, Desmond, Tandon, Arti, Mazieres, Stéphane, Ray, Nicolas, Parra, Maria V, Rojas, Winston, Duque, Constanza, Mesa, Natalia, García, Luis F, Triana, Omar, Blair, Silvia, Maestre, Amanda, Dib, Juan C, Bravi, Claudio M, Bailliet, Graciela, Corach, Daniel, Hünemeier, Tábita, Bortolini, Maria Cátira, Salzano, Francisco M, Petzl-Erler, María Luiza, Acuña-Alonzo, Victor, Aguilar-Salinas, Carlos, Canizales-Quinteros, Samuel, Tusié-Luna, Teresa, Riba, Laura, Rodríguez-Cruz, Maricela, Lopez-Alarcón, Mardia, Coral-Vazquez, Ramón, Canto-Cetina, Thelma, Silva-Zolezzi, Irma, Fernandez-Lopez, Juan Carlos, Contreras, Alejandra V, Jimenez-Sanchez, Gerardo, Gómez-Vázquez, Maria José, Molina, Julio, Carracedo, Ángel, Salas, Antonio, Gallo, Carla, Poletti, Giovanni, Witonsky, David B, Alkorta-Aranburu, Gorka, Sukernik, Rem I, Osipova, Ludmila, Fedorova, Sardana A, Vasquez, René, Villena, Mercedes, Moreau, Claudia, Barrantes, Ramiro, Pauls, David, Excoffier, Laurent, Bedoya, Gabriel, Rothhammer, Francisco, Dugoujon, Jean-Michel, Larrouy, Georges, Klitz, William, Labuda, Damian, Kidd, Judith, Kidd, Kenneth, Di Rienzo, Anna, Freimer, Nelson B, Price, Alkes L, and Ruiz-Linares, Andrés

Subjects
Biological Sciences, Genetics, History, Heritage and Archaeology, Human Society, Historical Studies, Anthropology, American Indian or Alaska Native, Americas, Asia, Cluster Analysis, Emigration and Immigration, Gene Flow, Genetics, Population, History, Ancient, Humans, Indians, North American, Models, Genetic, Phylogeny, Polymorphism, Single Nucleotide, Siberia, General Science & Technology
Abstract

The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America.

Published
2012

24. Functional New World monkey oxytocin forms elicit an altered signaling profile and promotes parental care in rats

Author

Parreiras-e-Silva, Lucas T., Vargas-Pinilla, Pedro, Duarte, Diego A., Longo, Dânae, Pardo, Grace Violeta Espinoza, Finkler, Andrea Dulor, Paixão-Côrtes, Vanessa Rodrigues, Paré, Pâmela, Rovaris, Diego L., Oliveira, Eduardo B., Caceres, Rafael Andrade, Gonçalves, Gislene L., Bouvier, Michel, Salzano, Francisco M., Lucion, Aldo B., Costa-Neto, Claudio M., and Bortolini, Maria Cátira

Published
2017

26. Geographic patterns of genome admixture in Latin American Mestizos.

Author

Wang, Sijia, Ray, Nicolas, Rojas, Winston, Parra, Maria V, Bedoya, Gabriel, Gallo, Carla, Poletti, Giovanni, Mazzotti, Guido, Hill, Kim, Hurtado, Ana M, Camrena, Beatriz, Nicolini, Humberto, Klitz, William, Barrantes, Ramiro, Molina, Julio A, Freimer, Nelson B, Bortolini, Maria Cátira, Salzano, Francisco M, Petzl-Erler, Maria L, Tsuneto, Luiza T, Dipierri, José E, Alfaro, Emma L, Bailliet, Graciela, Bianchi, Nestor O, Llop, Elena, Rothhammer, Francisco, Excoffier, Laurent, and Ruiz-Linares, Andrés

Subjects
Chromosomes, Human, X, Humans, Genetics, Population, Microsatellite Repeats, Heterozygote, Genome, Human, African Continental Ancestry Group, American Native Continental Ancestry Group, European Continental Ancestry Group, Latin America, Female, Male, Genetic Variation, Chromosomes, Human, X, Genetics, Population, Genome, Developmental Biology
Abstract

The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement) from seven countries in Latin America based on data for 678 autosomal and 29 X-chromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry) among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region.

Published
2008

29. A GWAS in Latin Americans highlights the convergent evolution of lighter skin pigmentation in Eurasia

Author

Adhikari, Kaustubh, Mendoza-Revilla, Javier, Sohail, Anood, Fuentes-Guajardo, Macarena, Lampert, Jodie, Chacón-Duque, Juan Camilo, Hurtado, Malena, Villegas, Valeria, Granja, Vanessa, Acuña-Alonzo, Victor, Jaramillo, Claudia, Arias, William, Lozano, Rodrigo Barquera, Everardo, Paola, Gómez-Valdés, Jorge, Villamil-Ramírez, Hugo, Silva de Cerqueira, Caio C., Hunemeier, Tábita, Ramallo, Virginia, Schuler-Faccini, Lavinia, Salzano, Francisco M., Gonzalez-José, Rolando, Bortolini, Maria-Cátira, Canizales-Quinteros, Samuel, Gallo, Carla, Poletti, Giovanni, Bedoya, Gabriel, Rothhammer, Francisco, Tobin, Desmond J., Fumagalli, Matteo, Balding, David, and Ruiz-Linares, Andrés

Published
2019
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32. Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance

Author

Chacón-Duque, Juan-Camilo, Adhikari, Kaustubh, Fuentes-Guajardo, Macarena, Mendoza-Revilla, Javier, Acuña-Alonzo, Victor, Barquera, Rodrigo, Quinto-Sánchez, Mirsha, Gómez-Valdés, Jorge, Everardo Martínez, Paola, Villamil-Ramírez, Hugo, Hünemeier, Tábita, Ramallo, Virginia, Silva de Cerqueira, Caio C., Hurtado, Malena, Villegas, Valeria, Granja, Vanessa, Villena, Mercedes, Vásquez, René, Llop, Elena, Sandoval, José R., Salazar-Granara, Alberto A., Parolin, Maria-Laura, Sandoval, Karla, Peñaloza-Espinosa, Rosenda I., Rangel-Villalobos, Hector, Winkler, Cheryl A., Klitz, William, Bravi, Claudio, Molina, Julio, Corach, Daniel, Barrantes, Ramiro, Gomes, Verónica, Resende, Carlos, Gusmão, Leonor, Amorim, Antonio, Xue, Yali, Dugoujon, Jean-Michel, Moral, Pedro, González-José, Rolando, Schuler-Faccini, Lavinia, Salzano, Francisco M., Bortolini, Maria-Cátira, Canizales-Quinteros, Samuel, Poletti, Giovanni, Gallo, Carla, Bedoya, Gabriel, Rothhammer, Francisco, Balding, David, Hellenthal, Garrett, and Ruiz-Linares, Andrés

Published
2018
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44. Remarkably LowKIRandHLADiversity in Amerindians Reveals Signatures of Strong Purifying Selection Shaping the CentromericKIRRegion

Author

de Brito Vargas, Luciana, primary, Beltrame, Marcia H, additional, Ho, Brenda, additional, Marin, Wesley M, additional, Dandekar, Ravi, additional, Montero-Martín, Gonzalo, additional, Fernández-Viña, Marcelo A, additional, Hurtado, A Magdalena, additional, Hill, Kim R, additional, Tsuneto, Luiza T, additional, Hutz, Mara H, additional, Salzano, Francisco M, additional, Petzl-Erler, Maria Luiza, additional, Hollenbach, Jill A, additional, and Augusto, Danillo G, additional

Published
2021
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