1. Signatures of adaptive evolution in platyrrhine primate genomes.
- Author
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Byrne H, Webster TH, Brosnan SF, Izar P, and Lynch JW
- Subjects
- Animals, Brain anatomy & histology, Brain growth & development, Cebus anatomy & histology, Cebus genetics, Cebus physiology, Cebus psychology, Cognition, Hominidae physiology, Hominidae psychology, Intelligence genetics, Longevity genetics, Phylogeny, Reproduction genetics, Saimiri anatomy & histology, Saimiri genetics, Saimiri physiology, Saimiri psychology, Selection, Genetic, Tool Use Behavior, Biological Evolution, Cebidae anatomy & histology, Cebidae classification, Cebidae genetics, Cebidae physiology, Genome genetics, Genomics
- Abstract
The platyrrhine family Cebidae (capuchin and squirrel monkeys) exhibit among the largest primate encephalization quotients. Each cebid lineage is also characterized by notable lineage-specific traits, with capuchins showing striking similarities to Hominidae such as high sensorimotor intelligence with tool use, advanced cognitive abilities, and behavioral flexibility. Here, we take a comparative genomics approach, performing genome-wide tests for positive selection across five cebid branches, to gain insight into major periods of cebid adaptive evolution. We uncover candidate targets of selection across cebid evolutionary history that may underlie the emergence of lineage-specific traits. Our analyses highlight shifting and sustained selective pressures on genes related to brain development, longevity, reproduction, and morphology, including evidence for cumulative and diversifying neurobiological adaptations across cebid evolution. In addition to generating a high-quality reference genome assembly for robust capuchins, our results lend to a better understanding of the adaptive diversification of this distinctive primate clade.
- Published
- 2022
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