1,162 results on '"S. Savage"'
Search Results
2. Author Correction: Graphene active sensor arrays for long-term and wireless mapping of wide frequency band epicortical brain activity
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R. Garcia-Cortadella, G. Schwesig, C. Jeschke, X. Illa, Anna L. Gray, S. Savage, E. Stamatidou, I. Schiessl, E. Masvidal-Codina, K. Kostarelos, A. Guimerà-Brunet, A. Sirota, and J. A. Garrido
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Science - Published
- 2021
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3. Dissecting task-based fMRI activity using normative modelling: an application to the Emotional Face Matching Task
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Hannah S. Savage, Peter C. R. Mulders, Philip F. P. van Eijndhoven, Jasper van Oort, Indira Tendolkar, Janna N. Vrijsen, Christian F. Beckmann, and Andre F. Marquand
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Biology (General) ,QH301-705.5 - Abstract
Abstract Functional neuroimaging has contributed substantially to understanding brain function but is dominated by group analyses that index only a fraction of the variation in these data. It is increasingly clear that parsing the underlying heterogeneity is crucial to understand individual differences and the impact of different task manipulations. We estimate large-scale (N = 7728) normative models of task-evoked activation during the Emotional Face Matching Task, which enables us to bind heterogeneous datasets to a common reference and dissect heterogeneity underlying group-level analyses. We apply this model to a heterogenous patient cohort, to map individual differences between patients with one or more mental health diagnoses relative to the reference cohort and determine multivariate associations with transdiagnostic symptom domains. For the face>shapes contrast, patients have a higher frequency of extreme deviations which are spatially heterogeneous. In contrast, normative models for faces>baseline have greater predictive value for individuals’ transdiagnostic functioning. Taken together, we demonstrate that normative modelling of fMRI task-activation can be used to illustrate the influence of different task choices and map replicable individual differences, and we encourage its application to other neuroimaging tasks in future studies.
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- 2024
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4. Space Ultrasound: A Proposal for Competency-based Ultrasound Training for In-flight Space Medicine
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Chanel Fischetti, Emily Frisch, Michael Loesche, Andrew Goldsmith, Ben Mormann, Joseph S. Savage, Roger Dias, and Nicole Duggan
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Medicine ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
Space travel has transformed in the past several years. Given the burgeoning market for space tourism, in-flight medical emergencies are likely to be expected. Ultrasound is one of the few diagnostic and therapeutic modalities available for astronauts in space. However, while point-of-care ultrasound (POCUS) is available, there is no current standard of training for astronaut preparation. We suggest an organized and structured methodology by which astronauts should best prepare for space with the medical equipment available on board. As technology continues to evolve, the assistance of other artificial intelligence and augmented reality systems are likely to facilitate training and dynamic real-time needs during space emergencies. Summary: As space tourism continues to evolve, an organized methodology for POCUS use is advised to best prepare astronauts for space.
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- 2024
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5. Every sip counts: Understanding hydration behaviors and user-acceptability of digital tools to promote adequate intake during early and late pregnancy
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Abigail M. Pauley, Asher Y. Rosinger, Jennifer S. Savage, David E. Conroy, and Danielle Symons Downs
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Computer applications to medicine. Medical informatics ,R858-859.7 - Published
- 2024
6. Comparing enhancements to well-child visits in the prevention of obesity: ENCIRCLE cluster-randomized controlled trial
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Lisa Bailey-Davis, Amy M. Moore, Melissa N. Poulsen, David A. Dzewaltowski, Stacey Cummings, Laina R. DeCriscio, Jennifer Franceschelli Hosterman, Daniel Huston, H. Lester Kirchner, Shawnee Lutcher, Carolyn McCabe, Gregory J. Welk, and Jennifer S. Savage
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Preschool-age ,Rural ,low-income ,Obesity ,Primary care ,Patient centered outcome ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Obesity disproportionally impacts rural, lower-income children in the United States. Primary care providers are well-positioned to engage parents in early obesity prevention, yet there is a lack of evidence regarding the most effective care delivery models. The ENCIRCLE study, a pragmatic cluster-randomized controlled trial, will respond to this gap by testing the comparative effectiveness of standard care well-child visits (WCV) versus two enhancements: adding a patient-reported outcome (PRO) measure (PRO WCV) and PRO WCV plus Food Care (telehealth coaching and a grocery store tour). Methods A total of 2,025 parents and their preschool-aged children (20–60 months of age) will be recruited from 24 Geisinger primary care clinics, where providers are randomized to the standard WCV, PRO WCV, or PRO WCV plus Food Care intervention arms. The PRO WCV includes the standard WCV plus collection of the PRO—the Family Nutrition and Physical Activity (FNPA) risk assessment—from parents. Parents complete the PRO in the patient-portal or in the clinic (own device, tablet, or kiosk), receive real-time feedback, and select priority topics to discuss with the provider. These results are integrated into the child’s electronic health record to inform personalized preventive counseling by providers. PRO WCV plus Food Care includes referrals to community health professionals who deliver evidence-based obesity prevention and food resource management interventions via telehealth following the WCV. The primary study outcome is change in child body mass index z-score (BMIz), based on the World Health Organization growth standards, 12 months post-baseline WCV. Additional outcomes include percent of children with overweight and obesity, raw BMI, BMI50, BMIz extended, parent involvement in counseling, health behaviors, food resource management, and implementation process measures. Discussion Study findings will inform health care systems’ choices about effective care delivery models to prevent childhood obesity among a high-risk population. Additionally, dissemination will be informed by an evaluation of mediating, moderating, and implementation factors. Trial registration ClinicalTrials.gov identifier (NCT04406441); Registered May 28, 2020.
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- 2022
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7. Sleep SAAF responsive parenting intervention improves mothers’ feeding practices: a randomized controlled trial among African American mother-infant dyads
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Erika Hernandez, Justin A. Lavner, Amy M. Moore, Brian K. Stansfield, Steven R. H. Beach, Jessica J. Smith, and Jennifer S. Savage
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Responsive parenting ,Prevention ,African American ,Infancy ,Feeding practices ,Childhood obesity ,Nutritional diseases. Deficiency diseases ,RC620-627 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background/Objective Parents shape children’s early experiences with food, influencing what is served, children’s food choices, and how much children eat. Responsive parenting (RP) interventions such as INSIGHT have improved maternal infant feeding practices, but have only been tested among predominantly White families. This secondary analysis of data from the Sleep SAAF (Strong African American Families) RCT tests the effects of an RP intervention designed to prevent rapid infant weight gain on African American mothers’ infant feeding practices. Methods Primiparous African American mother-infant dyads (n = 194) were randomized to an RP or safety control intervention delivered by community research associates at infant age 3 and 8 weeks. At 16 weeks, mothers completed the Babies Need Feeding questionnaire, the Infant Feeding Styles Questionnaire, and the Babies Need Soothing questionnaire. Logistic regression and general linear models examined the effect of study group on infant feeding practices. Moderation analyses explored whether effects varied by feeding mode (any breast milk versus exclusive formula), maternal age (≥ 20 years versus
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- 2022
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8. A mixed methods study of siblings’ roles in maternal feeding practices in early childhood: an application of the learning from experience process
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Cara F. Ruggiero, Amy M. Moore, Michele E. Marini, Stephen R. Kodish, Susan M. McHale, and Jennifer S. Savage
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Responsive feeding ,Siblings ,Family systems ,Mixed methods ,Infancy ,Toddlerhood ,Nutritional diseases. Deficiency diseases ,RC620-627 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Firstborn children have higher rates of obesity compared to secondborns, perhaps due, in part, to differential feeding practices. Despite the centrality of siblings in family life and potential for influence, almost nothing is known about the role of siblings in parent feeding practices in early childhood. Methods Participants (n = 117) were mothers of consecutively born siblings. Firstborns participated in an RCT that compared a responsive parenting intervention designed for primary prevention of obesity against a safety control. Secondborns participated in an observational cohort. Multilevel models tested whether and how firstborn characteristics (temperament, appetite, rapid weight gain) at 16 weeks and 1 year were associated maternal feeding practices of secondborns in infancy at 16 weeks, 28 weeks, and 1 year (food to soothe) and at ages 1, 2, and 3 years (structure-and control-based feeding practices). A purposive subsample (n = 30) of mothers also participated in semi-structured interviews to further illuminate potential sibling influences on maternal feeding practices during infancy and toddlerhood. Results Firstborn characteristics did not predict secondborn feeding in infancy (all ps > 0.05). Firstborn negative affect, however, predicted mothers’ less consistent mealtime routines (b (SE) = − 0.27 (0.09); p = 0.005) and more pressure (b (SE) = 0.38 (0.12); p = 0.001). Firstborn appetite predicted mothers’ less frequent use of food to soothe (b (SE) = − 0.16 (0.07); p = 0.02) when secondborns were toddlers. Firstborn surgency, regulation, and rapid weight gain, however, did not predict secondborn feeding practices during toddlerhood (all ps > 0.05). Interviews with mothers revealed three ways that maternal experiences with firstborns informed feeding practices of secondborns: 1) Use of feeding practices with secondborn that worked for the firstborn; 2) Confidence came from firstborn feeding experiences making secondborn feeding less anxiety-provoking; and 3) Additional experiences with firstborn and other factors that contributed to secondborn feeding practices. Conclusions Some firstborn characteristics and maternal experiences with firstborns as well as maternal psychosocial factors may have implications for mothers’ feeding practices with secondborns. Together, these mixed methods findings may inform future research and family-based interventions focused on maternal feeding of siblings in early childhood.
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- 2022
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9. Encouraging appropriate gestational weight gain in high‐risk gravida: A randomized controlled trial
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Awathif Dhanya Mackeen, Amanda J. Young, Shawnee Lutcher, Vonda Hetherington, Jacob W. Mowery, Jennifer S. Savage, Danielle Symons Downs, and Lisa Bailey‐Davis
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gestational weight gain ,nutrition counseling ,obesity ,pregnancy ,Internal medicine ,RC31-1245 - Abstract
Abstract Trial Design Excessive gestational weight gain (GWG) can increase pregnancy morbidity and is particularly problematic for women with pregestational obesity. A lifestyle modification intervention was introduced to gravida with obesity to decrease excessive GWG as compared to usual care (UC). Methods A randomized controlled trial was conducted to improve healthy lifestyle behaviors to manage appropriate GWG. Consenting participants with prepregnancy obesity and singletons ≤17 weeks were randomized to (1) Usual Care (UC): usual written educational materials and counseling by obstetric provider or (2) Enhanced Care (EC): UC plus (a) personalized letter from physician detailing appropriate GWG; (b) access to individualized GWG chart; (c) ongoing counseling with registered dietitian/nutritionist (RDN). The primary outcome was proportion with GWG ≤9.1 kg, as this is upper limit recommended by Institute of Medicine (IOM). Total GWG and GWG as less than/within/greater than IOM recommendations (in aggregate and stratified by obesity class), and pregnancy/neonatal outcomes were evaluated as secondary outcomes. Results Analyses included 105 participants in EC and 109 in UC arms. The groups had similar demographics: 46% with class I obesity, 26% class II, and 28% class III. There were no group differences for any GWG, pregnancy, or neonatal outcomes when analyzed in aggregate. As compared to those randomized to the EC arm, participants in UC arm with class I obesity gained 1.4 kg less and those with class II obesity were significantly more likely to gain within IOM guidelines (14.8% vs. 40.0%, adjusted p = 0.04). Participants with class III obesity randomized to EC arm were more likely to gain within IOM guidelines as compared to participants randomized to UC arm (29.0% vs. 6.7%, adjusted p = 0.02). Conclusion There were no differences in GWG observed between groups when analyzing participants in aggregate. However, a physician's letter detailing appropriate GWG, patient portal access to a personalized GWG chart, and RDN consultation were helpful for encouraging GWG within IOM guidelines for women with prepregnancy class III obesity. Women with class I or II obesity had better GWG outcomes without these additional interventions.
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- 2022
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10. 'Wholeness Is No Trifling Matter': Toward an Epistemology of Care, Touch, and Celebration in Education
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Wilson K. Okello and Shawn S. Savage
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wholeness ,epistemology ,care ,touch ,celebration ,political threats ,Education - Abstract
The authors argue that embracing life necessitates a shift in how we conceptualize wellness in education. They delve into the exploration of humanizing wellness and living well by drawing on Black onto-epistemologies, specifically referencing Bambara’s The Salt Eaters. This exploration involves examining how notions of wholeness manifest in the text and the subsequent implications for educators and scholars actively involved in anti-equity efforts. The authors elucidate both the possibilities and challenges related to care, touch, and celebration. In particular, they employ the concept of Black refusal to investigate how these elements can propel a critical departure from conventional ideas of wellness in the United States, paving the way for alternative modes of existence which prioritize wholeness. To achieve this, the authors present an exploration of the literature on whiteness, epistemology, and the destructive impact of anti-Blackness. The authors then introduce Black refusal as a theoretical framework, which functions as the frame guiding their methods. Examining personal reflective instances of engagement with the present political landscape, analyzing Bambara’s The Salt Eaters, and maintaining refusal as a central theoretical framework, the authors detail an epistemology of wholeness centered on care, touch, and celebration.
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- 2024
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11. Clinical trial management: a profession in crisis?
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E. J. Mitchell, K. Goodman, N. Wakefield, C. Cochran, S. Cockayne, S. Connolly, R. Desai, S. Hartley, S. A. Lawton, K. Oatey, S. Rhodes, J. S. Savage, J. Taylor, N. F. J. Youssouf, and on behalf of the UK Trial Managers’ Network
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Medicine (General) ,R5-920 - Abstract
Abstract Clinical trial managers play a vital role in the design and conduct of clinical trials in the UK. There is a current recruitment and retention crisis for this specialist role due to a complex set of factors, most likely to have come to a head due to the COVID-19 pandemic. Academic clinical trial units and departments are struggling to recruit trial managers to vacant positions, and multiple influences are affecting the retention of this highly skilled workforce. Without tackling this issue, we face major challenges in the delivery on the Department of Health and Social Care’s Future of UK Clinical Research Delivery implementation plan. This article, led by a leading network of and for UK Trial Managers, presents some of the issues and ways in which national stakeholders may be able to address this.
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- 2022
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12. Editorial: Healthy eating and parenting messages to prevent obesity
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Lisa Bailey-Davis and Jennifer S. Savage
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dietary guidelines ,parent feeding ,obesity prevention ,socioeconomic status ,policy ,Public aspects of medicine ,RA1-1270 - Published
- 2023
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13. Urinary cortisol is lower in pregnant women with higher pre-pregnancy BMI
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Emily E. Hohman, Joshua M. Smyth, Katherine M. McNitt, Abigail M. Pauley, Danielle Symons Downs, and Jennifer S. Savage
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pregnancy ,cortisol ,stress ,obesity ,intensive longitudinal data ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Background/objectivesAlthough cortisol levels increase during normal pregnancy, particularly high levels of cortisol or stress have been associated with adverse maternal/child outcomes. Obesity is associated with altered cortisol metabolism, but there is limited information on pregnancy-related changes in cortisol in pregnant women with overweight/obesity. The objective of this study was to examine weekly measures of urinary cortisol and perceived stress throughout ~10-36 weeks gestation, if levels differ by pre-pregnancy BMI categories, and whether concurrent measures of urinary cortisol and perceived stress are associated.MethodsLongitudinal observational data from Healthy Mom Zone, a gestational weight management intervention, and an ancillary fetal growth study were combined. Pregnant women with normal (n=7), overweight (n=11), or obese (n=14) pre-pregnancy BMI were recruited at >8 weeks gestation. Overnight urinary cortisol and Perceived Stress Scale were measured weekly from ~10-36 weeks gestation.ResultsHigher pre-pregnancy BMI was associated with overall lower urinary cortisol throughout gestation, but rate of increase in urinary cortisol across pregnancy was similar across weight status groups. Women with obesity reported higher levels of overall perceived stress than normal weight women. Regardless of weight status, perceived stress was not associated with gestational age or cortisol.ConclusionsAlthough women with obesity reported higher perceived stress, they had lower urinary cortisol than women with normal BMI, and gestation-related increases in cortisol were similar across weight groups and unrelated to perceived stress, suggesting that physiological factors that drive increases in cortisol as pregnancy may outweigh effects of stress and adiposity.Clinical trial registrationhttps://clinicaltrials.gov/ct2/show/NCT03945266, identifier (NCT03945266)
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- 2023
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14. Patient-reported outcome measures can advance population health, but is access to instruments and use equitable?
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Carolyn F. McCabe, G. Craig Wood, Jennifer Franceschelli-Hosterman, William J. Cochran, Jennifer S. Savage, and Lisa Bailey-Davis
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patient-reported outcome measure (PROM) ,pediatric care settings ,social determinansts of health ,healthcare factors ,individual-level factors ,Pediatrics ,RJ1-570 - Abstract
Patient reported outcome measures (PROM) can engage patients and clinicians to improve health outcomes. Their population health impact may be limited by systematic barriers inhibiting access to completion. In this analysis we evaluated the association between individual parent/child characteristics and clinic factors with parental completion of a locally developed PROM, the Early Healthy Lifestyles (EHL) questionnaire. Participants included parent-child dyads who presented at 14 pediatric clinics for regularly scheduled well-child visits (WCV) prior to age 26 months. EHL items include feeding practices, diet, play time, screen exposure, and sleep. Completion was categorized at patient- (i.e., parent-child dyad) and clinic-levels. Parents completed the 15-item EHL in the patient portal before arrival or in the clinic; ninety-three percent of EHL questionnaires were completed in the clinic vs. 7% in the patient portal. High-completers completed EHL for half of WCVs; low-completers completed at least once; and non-completers never completed. Clinics were classified by EHL adoption level (% high completion): High-adoption: >50%; Moderate-adoption: 10%–50%; and Low-adoption: 1 clinic site for WCV (OR = 1.83 [1.34, 2.50]), non-White birth mother (OR = 1.78 [1.28, 2.47]), and body weight
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- 2022
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15. Describing the movement of molecules in reduced-dimension models
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Natasha S. Savage
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Biology (General) ,QH301-705.5 - Abstract
Natasha Savage develops a general finite difference method for modeling 2D diffusion using a 1D reduced model. This method can be useful to improve the accuracy of many reduced-dimension models while retaining benefits of system simplification.
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- 2021
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16. The Multiview Observatory for Solar Terrestrial Science (MOST)
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N. Gopalswamy, T. A. Kucera, J. E. Leake, R. J. MacDowall, L. B. Wilson III, L. Jian, S. G. Kanekal, A. Shih, S. Christe, Q. Gong, N. Viall, S. K. Tadikonda, S. F. Fung, C. Kay, S. Yashiro, P. Mäkelä, L. Golub, E. DeLuca, K. Reeves, A. C. Sterling, S. Savage, A. R. Winebarger, C. DeForest, M. I. Desai, D. B. Seaton, J. Lazio, E. A. Jensen, W. C. Manchester, N. Sachdeva, B. Wood, J. Kooi, P. Hess, D. B. Wexler, S. D. Bale, S. Krucker, N. Hurlburt, M. DeRosa, A. Pevtsov, S. C. Tripathy, K. Jain, S. Gosain, S. Kholikov, J. Zhao, P. H. Scherrer, S. P. Rajaguru, T. Woods, M. Kenney, J Zhang, C. Scolini, K. Cho, and Y.-D. Park
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Solar Physics - Abstract
Understanding the emergence of magnetic flux from the solar interior through the photosphere and its global impact on the inner heliosphere is a key scientific goal of the heliophysics community. This white paper outlines the concept of the Multiview Observatory for Solar Terrestrial Science (MOST) mission, which will make measurements of solar variability from the solar interior, atmosphere, and the interplanetary (IP) medium. MOST will be a 4- spacecraft mission with one each at L4 (MOST1) and L5 (MOST2) and the other two (MOST3 and MOST4) at variable locations along Earth orbit. MOST1 and MOST2 will each carry seven remote-sensing and 3 in-situ instruments. All four spacecraft will carry a novel radio package known as the Faraday Effect Tracker of Coronal and Heliospheric structures (FETCH) that will systematically probe the magnetic content of transient IP structures including coronal mass ejections (CMEs) and stream interaction regions (SIRs). The Faraday rotation measurements will provide magnetic content of these structures at various heliocentric distances from the outer corona to Earth’s vicinity. Photospheric and/or chromospheric magnetograms will cover >70% of the solar surface providing synchronic maps needed for accurately modeling the corona and solar wind. EUV, coronagraph, radio spectrograph, and heliospheric imager (HI) observations from multiple viewpoints provide 3-d information on CMEs/CME-driven shocks, SIRs, and other solar wind structures. Hard X-ray imagers will provide the flare aspects of solar eruptions to complement the CME aspects. MOST, a 10-year mission, is well aligned with NASA’s Heliophysics objectives and will provide an unprecedented opportunity to achieve these objectives with broad participation from the heliophysics community.
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- 2022
17. Teaching families to manage intake of candy in the home: Results from a feasibility study using multiphase optimization strategy (MOST)
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J. S. Savage, E. L. Adams, B. Y. Rollins, J. A. Bleser, and M. E. Marini
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child appetite regulation ,controlling feeding practices ,food restriction ,structure‐based parenting ,Internal medicine ,RC31-1245 - Abstract
Summary Background Excess intake of desserts/sweets high in added sugars, such as candy, is linked with greater obesity risk. Parents often limit their childrens' intake of these sweet foods using controlling feeding practices, such as restriction; yet, restrictive feeding practices are counterproductive for childrens' self‐regulation of energy intake. Objective This study developed a family‐based behavioural intervention that taught parents alternatives to restrictive feeding practices and encouraged children to consume candy in moderation. Methods Using the multiphase optimization strategy (MOST), parent–child dyads (N = 37) were randomized into one of eight conditions that included a combination of intervention components delivered over 4 weeks: home supply, parent shared decision making, child mindfulness and child attention control strategies. Results Retention rate at follow‐up was high (95%). Among parents who received parent shared decision making, 86.4% reported the structured‐based candy routine they set with their child was easy to follow. Most children reported child mindfulness (95%) and attention control (89.5%) strategies were easy to play. Children recalled 4.1 ± 1.8 of the six mindfulness strategies and 2.7 ± 1.6 of the five attention control strategies at follow‐up. Eating in the absence of hunger tended to be lower for children who received parent shared decision making and child mindfulness components. Conclusion This intervention was feasible and well‐implemented in the home environment. Findings will inform future, larger interventions designed to test similar strategies on childrens; eating behaviours and self‐regulation.
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- 2020
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18. Short Nighttime Sleep Duration and High Number of Nighttime Awakenings Explain Increases in Gestational Weight Gain and Decreases in Physical Activity but Not Energy Intake among Pregnant Women with Overweight/Obesity
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Abigail M. Pauley, Emily E. Hohman, Krista S. Leonard, Penghong Guo, Katherine M. McNitt, Daniel E. Rivera, Jennifer S. Savage, and Danielle Symons Downs
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pregnancy ,sleep ,energy balance ,gestational weight gain ,energy intake ,physical activity ,Medicine - Abstract
Pregnant women are at a high risk for experiencing sleep disturbances, excess energy intake, low physical activity, and excessive gestational weight gain (GWG). Scant research has examined how sleep behaviors influence energy intake, physical activity, and GWG over the course of pregnancy. This study conducted secondary analyses from the Healthy Mom Zone Study to examine between- and within-person effects of weekly sleep behaviors on energy intake, physical activity, and GWG in pregnant women with overweight/obesity (PW-OW/OB) participating in an adaptive intervention to manage GWG. The overall sample of N = 24 (M age = 30.6 years, SD = 3.2) had an average nighttime sleep duration of 7.2 h/night. In the total sample, there was a significant between-person effect of nighttime awakenings on physical activity; women with >1 weekly nighttime awakening expended 167.56 less physical activity kcals than women with
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- 2020
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19. Modulation of the brain's core-self network by self-appraisal processes
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Rebekah Delahoy, Christopher G. Davey, Alec J. Jamieson, Laura Finlayson-Short, Hannah S. Savage, Trevor Steward, and Ben J. Harrison
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Default mode network ,Self ,fMRI ,Dynamic causal modelling ,Effective connectivity ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The ‘core’ regions of the default mode network (DMN) – the medial prefrontal cortex (MPFC), the posterior cingulate cortex (PCC), and inferior parietal lobules (IPL) – show consistent engagement across mental states that involve self-oriented processing. Precisely how these regions interact in support of such processes remains an important unanswered question. In the current functional magnetic resonance imaging (fMRI) study, we examined dynamic interactions of the ‘core-self’ DMN regions during two forms of self-referential cognition: direct self-appraisal (thinking about oneself) and reflected self-appraisal (thinking about oneself from a third-person perspective). One-hundred and eleven participants completed our dual self-appraisal task during fMRI, and general linear models were used to characterize common and distinct neural responses to these conditions. Informed by these results, we then applied dynamic causal modelling to examine causal interactions among the ‘core-self’ regions, and how they were specifically modulated under the influence of direct and reflected self-appraisal. As a primary observation, this network modelling revealed a distinct inhibitory influence of the left IPL on the PCC during reflected compared to direct self-appraisal, which was accompanied by evidence of greater activation in both regions during the reflected self-appraisal condition. We suggest that the greater engagement of posterior DMN regions during reflected self-appraisal is a function of the higher-order processing needed for this form of self-appraisal, with the left IPL supporting abstract self-related processes including episodic memory retrieval and shifts of perspective. Overall, we show that core DMN regions interact in functionally unique ways in support of self-referential processes, even when these processes are inter-related. Further characterization of DMN functional interactions across self-related mental states is likely to inform a deeper understanding of how this brain network orchestrates the self.
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- 2022
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20. Continuum solutions to the two-center Coulomb problem in prolate spheroidal coordinates.
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Adam Singor, Jeremy S. Savage, Igor Bray, Barry I. Schneider, and Dmitry V. Fursa
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- 2023
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21. Transforming Obesity Prevention for CHILDren (TOPCHILD) Collaboration: protocol for a systematic review with individual participant data meta-analysis of behavioural interventions for the prevention of early childhood obesity
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Finn Rasmussen, Hein Raat, Cristina Palacios, Barry J Taylor, Lisa Askie, Alison Hayes, Cindy-Lee Dennis, Karen Campbell, Wendy Smith, Luke Wolfenden, Sharleen O’Reilly, Eva Corpeleijn, Maria Bryant, Chris Rissel, Denise O’Connor, Paul Chadwick, Jessica Thomson, Anna Lene Seidler, Kylie E Hunter, Rachael W Taylor, Angie Barba, Kristy Robledo, Ken Ong, Carolina González Acero, Ana Pérez-Expósito, Kylie D Hesketh, Rebecca K Golley, David Espinoza, Ken K Ong, Sarah Taki, Rachael Taylor, Louise A Baur, Li Ming Wen, Seema Mihrshahi, Emily Oken, Barry Taylor, Ian Marschner, Junilla K Larsen, Kylie Hesketh, Rajalakshmi Lakshman, Amanda L Thompson, Sharleen L O'Reilly, Jonathan Williams, Charles Wood, Alison J Hayes, Kaumudi Joshipura, Hongping Xia, Lynne Daniels, Rebecca Byrne, Alison Karasz, Rebecca Golley, Kaumudi J Joshipura, Angela Webster, Nina Cecilie Øverby, Brittany J Johnson, Mason Aberoumand, Sol Libesman, Kristy P Robledo, Charles T Wood, Lukas P Staub, Michelle Sue-See, Ian C Marschner, Jessica L Thomson, Vera Verbestel, Sarah-Jeanne Salvy, Levie T Karssen, Finn E Rasmussen, Mary Jo Messito, Rachel S Gross, Ian M Paul, Heather M Wasser, Claudio Maffeis, Ata Ghaderi, Jinan C Banna, Maribel Campos Rivera, Ana B Pérez-Expósito, Jennifer S Savage, Margrethe Røed, Michael Goran, Kayla de la Haye, Stephanie Anzman-Frasca, Kylie Hunter, Brittany Johnson, Louise Baur, Lukas Staub, Shonna Yin, Lee Sanders, Amanda Thompson, Ana Maria Linares, Cathleen Odar Stough, Christine Helle, Eliana Perrin, Heather Wasser, Jinan Banna, Kayla dela Haye, Levie Karssen, Nina Øverby, Rachel Gross, Russell Rothman, Wendy A Smith, Alexander Fiks, Deborah Jacobvitz, Jennifer Savage Williams, Márcia Regina Vitolo, and Elizabeth Widen
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Medicine - Published
- 2022
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22. Neural mediators of subjective and autonomic responding during threat learning and regulation
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Hannah S. Savage, Christopher G. Davey, Tor D. Wager, Sarah N. Garfinkel, Bradford A. Moffat, Rebecca K. Glarin, and Ben J. Harrison
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Neural mediators ,Skin conductance response (SCR) ,Subjective ratings ,Threat learning ,Threat reversal ,7T fMRI ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Threat learning elicits robust changes across multiple affective domains, including changes in autonomic indices and subjective reports of fear and anxiety. It has been argued that the underlying causes of such changes may be dissociable at a neural level, but there is currently limited evidence to support this notion. To address this, we examined the neural mediators of trial-by-trial skin conductance responses (SCR), and subjective reports of anxious arousal and valence in participants (n = 27; 17 females) performing a threat reversal task during ultra-high field functional magnetic resonance imaging. This allowed us to identify brain mediators during initial threat learning and subsequent threat reversal. Significant neural mediators of anxious arousal during threat learning included the dorsal anterior cingulate, anterior insula cortex (AIC), and ventromedial prefrontal cortex (vmPFC), subcortical regions including the amygdala, ventral striatum, caudate and putamen, and brain-stem regions including the pons and midbrain. By comparison, autonomic changes (SCR) were mediated by a subset of regions embedded within this broader circuitry that included the caudate, putamen and thalamus, and two distinct clusters within the vmPFC. The neural mediators of subjective negative valence showed prominent effects in posterior cortical regions and, with the exception of the AIC, did not overlap with threat learning task effects. During threat reversal, positive mediators of both subjective anxious arousal and valence mapped to the default mode network; this included the vmPFC, posterior cingulate, temporoparietal junction, and angular gyrus. Decreased SCR during threat reversal was positively mediated by regions including the mid cingulate, AIC, two sub-regions of vmPFC, the thalamus, and the hippocampus. Our findings add novel evidence to support distinct underlying neural processes facilitating autonomic and subjective responding during threat learning and threat reversal. The results suggest that the brain systems engaged in threat learning mostly capture the subjective (anxious arousal) nature of the learning process, and that appropriate responding during threat reversal is facilitated by participants engaging self- and valence-based processes. Autonomic changes (SCR) appear to involve distinct facilitatory and regulatory contributions of vmPFC sub-regions.
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- 2021
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23. System Identification Approaches for Energy Intake Estimation: Enhancing Interventions for Managing Gestational Weight Gain.
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Penghong Guo, Daniel E. Rivera, Jennifer S. Savage, Emily E. Hohman, Abigail M. Pauley, Krista S. Leonard, and Danielle S. Downs
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- 2020
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24. Sorry Parents, Children Consume High Amounts of Candy before and after a Meal: Within-Person Comparisons of Children’s Candy Intake and Associations with Temperament and Appetite
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Erika Hernandez, Amy M. Moore, Brandi Y. Rollins, Alison Tovar, and Jennifer S. Savage
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eating in the absence of hunger ,temperament ,appetite ,candy ,Pediatrics ,RJ1-570 - Abstract
Candy provides little nutritional value and contributes to children’s energy intake from added sugars. Factors influencing children’s candy intake remain largely unknown. This study describes children’s total candy intake (kcal) before and after a meal and examines associations of candy intake in both conditions with children’s temperament and appetite among a predominantly White, highly educated sample. Children (n = 38, age 5–8 years) were given free access to 11 candies (5 chocolate, 6 non-chocolate) and non-food alternatives during a pre-meal and a post-meal condition. Parents completed the Child Behavior Questionnaire and the Child Eating Behavior Questionnaire. Total candy intake was less when offered after a meal (209.3 kcal; SD = 111.25) than before a meal when still hungry (283.6 kcal; SD = 167.3), but not statistically different. Individual differences in candy intake between conditions was calculated to categorize children into three groups: “Better Regulators” consumed more candy before a meal (39%), “Consistent/Poorer Regulators” consumed similar amounts before and after a meal regardless of hunger (32%), and “Most Disinhibited” children consumed more candy after a meal when not hungry (29%). The “Better Regulators” group was lowest in negative affect and the “Consistent/Poorer Regulators” group was highest in food responsiveness. Children’s candy intake was high relative to daily energy needs both before and after a meal. Child negative affect and food responsiveness appear to be child characteristics that predispose children to poor self-regulation of candy intake before and after a meal.
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- 2022
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25. CATALYST trial protocol: a multicentre, open-label, phase II, multiarm trial for an early and accelerated evaluation of the potential treatments for COVID-19 in hospitalised adults
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Dhruv Parekh, Simon Gates, Julian Bion, Tonny Veenith, Matthew Rowland, Tony Whitehouse, Anna Rowe, Pamela Kearns, Benjamin A. Fisher, Daniel Slade, Rowena Sharpe, David R. Thickett, James Scriven, Sarah J. Bowden, Joshua S. Savage, and Duncan Richards
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Medicine - Abstract
Introduction Severe SARS-CoV-2 infection is associated with a dysregulated immune response. Inflammatory monocytes and macrophages are crucial, promoting injurious, proinflammatory sequelae. Immunomodulation is, therefore, an attractive therapeutic strategy and we sought to test licensed and novel candidate drugs.Methods and analysis The CATALYST trial is a multiarm, open-label, multicentre, phase II platform trial designed to identify candidate novel treatments to improve outcomes of patients hospitalised with COVID-19 compared with usual care. Treatments with evidence of biomarker improvements will be put forward for larger-scale testing by current national phase III platform trials. Hospitalised patients >16 years with a clinical picture strongly suggestive of SARS-CoV-2 pneumonia (confirmed by chest X-ray or CT scan, with or without a positive reverse transcription PCR assay) and a C reactive protein (CRP) ≥40 mg/L are eligible. The primary outcome measure is CRP, measured serially from admission to day 14, hospital discharge or death. Secondary outcomes include the WHO Clinical Progression Improvement Scale as a principal efficacy assessment.Ethics and dissemination The protocol was approved by the East Midlands-Nottingham 2 Research Ethics Committee (20/EM/0115) and given urgent public health status; initial approval was received on 5 May 2020, current protocol version (V.6.0) approval on 12 October 2020. The MHRA also approved all protocol versions. The results of this trial will be disseminated through national and international presentations and peer-reviewed publications.Trial registration numbers EudraCT2020-001684-89, ISRCTN40580903.
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- 2021
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26. Feasibility of enhancing well‐child visits with family nutrition and physical activity risk assessment on body mass index
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L. Bailey‐Davis, S. M. R. Kling, G. C. Wood, W. J. Cochran, J. W. Mowery, J. S. Savage, R. A. Stametz, and G. J. Welk
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BMI ,paediatrics ,prevention ,primary care ,Internal medicine ,RC31-1245 - Abstract
Summary Objective Integration of behavioural risk assessment into well‐child visits is recommended by clinical guidelines, but its feasibility and impact is unknown. Methods A quasi‐experimental study evaluated the feasibility and effectiveness of risk assessment on body mass index (BMI) at 1‐year follow‐up. Children with assessments (intervention) were compared with those who did not complete assessments (non‐respondent) and those who received standard care (non‐exposed). Results Analyses included 10,647 children aged 2–9 years (2,724 intervention, 3,324 non‐respondent and 4,599 non‐exposed). Forty‐five per cent of parents completed the assessments. Intervention and non‐respondent groups differed in change in BMI z‐score at 1 year by −0.05 (confidence interval [CI]: −0.08, −0.02; P = 0.0013); no difference was observed with non‐exposed children. The intervention group had a smaller increase in BMI z‐score (0.07 ± 0.63) than non‐respondent group (0.13 ± 0.63). For children with normal weight at baseline, intervention versus non‐respondent groups differed in BMI z‐score change by −0.06 (CI: −0.10, −0.02; P = 0.0025). However, children with overweight at baseline in the intervention versus the non‐exposed group differed in BMI z‐score change (0.07 [CI: 0.02, 0.14]; P = 0.016). When analysed by age, results were similar for 2‐ to 5‐year‐olds, but no differences were found for 6‐ to 9‐year‐olds. Conclusion Automating risk assessment in paediatric care is feasible and effective in promoting healthy weight among preschool but not older children.
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- 2019
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27. Effect of the INSIGHT Responsive Parenting Intervention on Parenting and Child Behavior at Ages 3 and 6 Years
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Sara Tauriello, Jennifer S. Savage, Juliana Goldsmith, Elizabeth Kubiniec, Ian M. Paul, and Stephanie Anzman-Frasca
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Pediatrics, Perinatology and Child Health - Published
- 2023
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28. Optimizing behavioral interventions to regulate gestational weight gain with sequential decision policies using hybrid model predictive control.
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Penghong Guo, Daniel E. Rivera, Yuwen Dong, Sunil Deshpande, Jennifer S. Savage, Emily E. Hohman, Abigail M. Pauley, Krista S. Leonard, and Danielle Symons Downs
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- 2022
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29. A patient-centered, coordinated care approach delivered by community and pediatric primary care providers to promote responsive parenting: pragmatic randomized clinical trial rationale and protocol
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Jennifer S. Savage, Samantha M. R. Kling, Adam Cook, Lindsey Hess, Shawnee Lutcher, Michele Marini, Jacob Mowery, Shannon Hayward, Sandra Hassink, Jennifer Franceschelli Hosterman, Ian M. Paul, Chris Seiler, and Lisa Bailey-Davis
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Early obesity prevention ,Responsive parenting ,Health information technology ,Coordination of care ,The special supplemental women ,Infants ,Pediatrics ,RJ1-570 - Abstract
Abstract Background Economically disadvantaged families receive care in both clinical and community settings, but this care is rarely coordinated and can result in conflicting educational messaging. WEE Baby Care is a pragmatic randomized clinical trial evaluating a patient-centered responsive parenting (RP) intervention that uses health information technology (HIT) strategies to coordinate care between pediatric primary care providers (PCPs) and the Special Supplemental Nutrition Program for Women, Infant and Children (WIC) community nutritionists to prevent rapid weight gain from birth to 6 months. It is hypothesized that data integration and coordination will improve consistency in RP messaging and parent self-efficacy, promoting shared decision making and infant self-regulation, to reduce infant rapid weight gain from birth to 6 months. Methods/design Two hundred and ninety mothers and their full-term newborns will be recruited and randomized to the “RP intervention” or “standard care control” groups. The RP intervention includes: 1) parenting and nutrition education developed using the American Academy of Pediatrics Healthy Active Living for Families curriculum in conjunction with portions of a previously tested RP curriculum delivered by trained pediatric PCPs and WIC nutritionists during regularly scheduled appointments; 2) parent-reported data using the Early Healthy Lifestyles (EHL) risk assessment tool; and 3) data integration into child’s electronic health records with display and documentation features to inform counseling and coordinate care between pediatric PCPs and WIC nutritionists. The primary study outcome is rapid infant weight gain from birth to 6 months derived from sex-specific World Health Organization adjusted weight-for-age z-scores. Additional outcomes include care coordination, messaging consistency, parenting behaviors (e.g., food to soothe), self-efficacy, and infant sleep health. Infant temperament and parent depression will be explored as moderators of RP effects on infant outcomes. Discussion This pragmatic patient-centered RP intervention integrates and coordinates care across clinical and community sectors, potentially offering a fundamental change in the delivery of pediatric care for prevention and health promotion. Findings from this trial can inform large scale dissemination of obesity prevention programs. Trial registration Restrospective Clinical Trial Registration: NCT03482908. Registered March 29, 2018.
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- 2018
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30. A Strategy for Coherent and Comprehensive Observations of the Middle Corona
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D.B. Seaton and S. Savage
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Solar Physics - Published
- 2021
31. Assessment of a Non-Invasive Brain Pulse Monitor to Measure Intra-Cranial Pressure Following Acute Brain Injury
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Barry Dixon, Jessica M Sharkey, Elliot J Teo, Sally A Grace, Jacqui S Savage, Andrew Udy, Paul Smith, Jack Hellerstedt, and John D Santamaria
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Evidence and Research [Medical Devices] ,Biomedical Engineering ,Medicine (miscellaneous) - Abstract
Barry Dixon,1â 3 Jessica M Sharkey,1 Elliot J Teo,1,2 Sally A Grace,1 Jacqui S Savage,1 Andrew Udy,4 Paul Smith,5,6 Jack Hellerstedt,1 John D Santamaria2 1Cyban Pty Ltd, Melbourne, VIC, Australia; 2Department of Critical Care Medicine, St Vincentâs Hospital, Melbourne, Australia; 3Department of Medicine, University of Melbourne, Melbourne, Vic, Australia; 4Department of Critical Care Medicine, The Alfred Hospital, Melbourne, Australia; 5Department of Neurosurgery, St Vincentâs Hospital, Melbourne, Australia; 6University of Melbourne Medical School, Melbourne, Vic, AustraliaCorrespondence: Barry Dixon, Department of Critical Care Medicine, St Vincentâs Hospital (Melbourne), 41 Victoria Parade, Fitzroy, VIC, 3065, Australia, Tel +61 3 9231 4425, Email barry.dixon@svha.org.auBackground: Intracranial pressure (ICP) monitoring requires placing a hole in the skull through which an invasive pressure monitor is inserted into the brain. This approach has risks for the patient and is expensive. We have developed a non-invasive brain pulse monitor that uses red light to detect a photoplethysmographic (PPG) signal arising from the blood vessels on the brainâs cortical surface. The brain PPG and the invasive ICP waveform share morphological features which may allow measurement of the intracranial pressure.Methods: We enrolled critically ill patients with an acute brain injury with invasive ICP monitoring to assess the new monitor. A total of 24 simultaneous invasive ICP and brain pulse monitor PPG measurements were undertaken in 12 patients over a range of ICP levels.Results: The waveform morphologies were similar for the invasive ICP and brain pulse monitor PPG approach. Both methods demonstrated a progressive increase in the amplitude of P2 relative to P1 with increasing ICP levels. An automated algorithm was developed to assess the PPG morphological features in relation to the ICP level. A correlation was demonstrated between the brain pulse waveform morphology and ICP levels, R2=0.66, P < 0.001.Conclusion: The brain pulse monitorâs PPG waveform demonstrated morphological features were similar to the invasive ICP waveform over a range of ICP levels, these features may provide a method to measure ICP levels.Trial Registration: ACTRN12620000828921.Keywords: intracranial pressure, acute brain injury, monitoring, non-invasive, photoplethysmography
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- 2023
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32. Clarifying the neural substrates of threat and safety reversal learning in humans.
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Hannah S. Savage, Christopher G. Davey, Miquel Angel Fullana, and Ben J. Harrison
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- 2020
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33. Semi-physical identification and state estimation of energy intake for interventions to manage gestational weight gain.
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Penghong Guo, Daniel E. Rivera, Danielle S. Downs, and Jennifer S. Savage
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- 2016
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34. Flexible phonics: a complementary ‘next generation’ approach for teaching early reading
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Greta Boldrini, Amy C. Fox, and Robert S. Savage
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Language and Linguistics ,Education - Published
- 2022
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35. Sleep parenting practices are associated with infant self-soothing behaviors when measured using actigraphy
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Elizabeth L. Adams, Lindsay Master, Orfeu M. Buxton, and Jennifer S. Savage
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Parenting ,Humans ,Infant ,Mothers ,Female ,General Medicine ,Wakefulness ,Sleep ,Actigraphy - Abstract
Night wakings are common during infancy, with variability in infant self-soothing or requiring parent involvement to fall back asleep. Reasons for variable soothing behaviors are unclear and may be influenced by early-life sleep parenting practices. The study applied a novel method using sleep actigraphy in mother-father-infant triads to quantify infant-only wake bouts (i.e., "self-soothing") and examined associations between sleep parenting practices from 6 to 24 weeks of age.Mother-father-infant triads (N = 20) wore sleep monitors for 1 week at infant ages 6, 15, and 24 weeks. Data were time-matched within families to quantify infant-only wake bouts (when infants woke in the night and parents remained asleep) to be indicative of infant self-soothing. Mothers reported on sleep parenting practices (e.g., feeding to sleep, putting infants to bed while awake) using the Brief Infant Sleep Questionnaire at each age. Mixed models tested associations between parenting practices and infant-only wake bouts.Most mothers (69.5%) reported typically feeding their infants to sleep at bedtime; 27.1% reported typically putting infants to bed while still awake. Parenting practices associated with a greater proportion and frequency of infant-only wake bouts included not typically feeding infants to sleep during night wakings, putting infants to bed while still awake (at 24 weeks of age), and using a greater proportion of low-, rather than high-, stimulus soothing strategies during night wakings.These data suggest parenting practices, such as putting infants to bed when drowsy but still awake, are important strategies for promoting infant self-soothing during night wakings.
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- 2022
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36. Multi-task Learning in Deep Gaussian Processes with Multi-kernel Layers.
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Ayman Boustati and Richard S. Savage
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- 2019
37. Development and Psychometric Properties of the Sleep Parenting Scale for Infants
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Susan Redline, Elsie M. Taveras, Kari C. Kugler, Jennifer S. Savage, Sebastien Haneuse, Brian Lo, Jess Haines, Kirsten K. Davison, and Melissa L. McTernan
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Psychiatry and Mental health ,Convergent validity ,Cronbach's alpha ,Scale (social sciences) ,Concurrent validity ,Measurement invariance ,Psychology ,Bedtime ,Applied Psychology ,Exploratory factor analysis ,Confirmatory factor analysis ,Developmental psychology - Abstract
Although infants' sleep behaviors are shaped by their interactions with parents at bedtime, few tools exist to capture parents' sleep parenting practices. This study developed a Sleep Parenting Scale for Infants (SPS-I) and aimed to (1) explore and validate its factorial structure, (2) examine its measurement invariance across mothers and fathers, and (3) investigate its reliability and concurrent and convergent validity. SPS-I was developed via a combination of items modified from existing scales and the development of novel items. Participants included 188 mothers and 152 mother-father dyads resulting in 340 mothers and 152 fathers; about half were non-Hispanic white. Mothers and fathers completed a 14-item SPS-I for their 12-month-old infant. Exploratory factor analysis (EFA) and confirmatory factor analysis (CFA) were used to explore and validate SPS-I's underlying structure. Multigroup CFA was used to examine measurement invariance across mothers and fathers. Reliability was examined using Cronbach's alpha. Concurrent validity was assessed using linear regressions examining associations between SPS-I factors and parent-reported infants nighttime sleep duration. Convergent validity was assessed using paired-sample t-tests to test whether the SPS-I subscale scores were similar between mothers and fathers in the same household. EFA and CFA confirmed a 3-factor, 12-item model: sleep routines, sleep autonomy, and screen media in the sleep environment. SPS-I was invariant across mothers and fathers and was reliable. Concurrent and convergent validity were established. SPS-I has good psychometric properties, supporting its use for characterizing sleep routines, sleep autonomy, and screen media in the sleep environment by mothers and fathers.Supplemental data for this article is available online at https://doi.org/10.1080/08964289.2021.2002799 .
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- 2023
38. Direct sibling influence on eating behavior in early childhood: Siblings as role models and caregivers
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Cara F. Ruggiero, Amy M. Moore, and Jennifer S. Savage
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Pediatrics, Perinatology and Child Health - Published
- 2023
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39. Sleep SAAF Responsive Parenting Intervention for Black Mothers Impacts Response to Infant Crying: A Randomized Clinical Trial
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Emily E. Hohman, Jennifer S. Savage, Brian K. Stansfield, and Justin A. Lavner
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Pediatrics, Perinatology and Child Health - Published
- 2023
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40. Empirical antibiotic choice alters microbiological outcomes: Findings from comparative antibiograms in a trauma intensive care unit
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T Thomas, S Savage-Reid, and M S Moeng
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medicine.medical_specialty ,Imipenem ,medicine.drug_class ,Antibiotics ,Critical Care and Intensive Care Medicine ,medicine.disease_cause ,Antibiotic resistance ,trauma intensive care unit ,Internal medicine ,amikacin ,medicine ,nosocomial infections ,antimicrobial resistance ,empirical antibiotics ,piperacillin-tazobactam ,imipenem ,biology ,Pseudomonas aeruginosa ,business.industry ,biology.organism_classification ,Antimicrobial ,Acinetobacter baumannii ,Candida auris ,Amikacin ,business ,medicine.drug - Abstract
Background . Inappropriate empirical antibiotics promote antibiotic resistance. Antibiograms guide empirical antibiotic therapy by outlining the percentage susceptibility of each pathogen to individual antibiotics. In 2016, the Trauma Intensive Care Unit at Charlotte Maxeke Johannesburg Academic Hospital escalated empirical antibiotic therapy for nosocomial infections from piperacillin-tazobactam to imipenem plus amikacin. Objectives. This study assessed the impact of escalation in empirical antimicrobial treatment on organism prevalence and resistance profile. Methods. A retrospective analysis of bacterial and fungal microscopy, culture and susceptibility reports from the laboratory information system of the National Health Laboratory Services, from 1 January 2015 to 31 December 2015 and 1 January 2017 to 31 December 2017, was conducted. Data were de-duplicated according to standard guidelines. Fisher’s exact test was used to determine p-values. Results. Organism prevalence shifted between the years, with a 2.7% increase in streptococci ( p =0.0199), 1.7% increase in Candida auris ( p =0.0031) and 4.6% and 4.4% reduction in Acinetobacter baumannii ( p =0.0508) and Pseudomonas aeruginosa ( p =0.0196), respectively. Similarly, there was a change in the resistance profile, with a 28.9% reduction in multi-drug resistant (MDR) A. baumannii ( p =0.0001), 60.4% reduction in MDR P. aeruginosa ( p =0.0001) and a 6.5% increase in carbapenem-resistant Enterobacterales ( p =0.007). The predominant specimen type differed between the years, with significantly more pus, tissue and fluid samples and fewer respiratory samples sent for investigation in 2017 than 2015. Conclusion. Escalation in the use of empirical antibiotics showed a change in organism prevalence and an improvement in the susceptibility profile of MDR non-fermenters.
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- 2023
41. Unpacking the functional heterogeneity of the Emotional Face Matching Task: a normative modelling approach
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Hannah S. Savage, Peter C. R. Mulders, Philip F. P. van Eijndhoven, Jasper van Oort, Indira Tendolkar, Janna N. Vrijsen, Christian F. Beckmann, and Andre F. Marquand
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Article - Abstract
In this study we dissect the heterogeneity that underlies traditional group-level analyses, and determine how individualised patterns of predicted activation relate to age, sex, and variations in acquisition parameters and task design choices. To this end we take advantage of six large open-access/shared datasets and collate a large representative sample of over 7500 participants from which we build a normative of task-evoked activation during a widely used emotional reactivity task, the Emotional Face Matching Task. This enables us to bind heterogeneous datasets to a common reference model and enables meaningful comparisons between them. We then apply this model to the naturalistic and clinically realistic MIND-Set cohort, which is a heterogeneous and highly comorbid sample containing individuals with one or more current diagnosis (affective and anxiety disorders, autism spectrum disorders and/or attention deficit hyperactivity disorder). This enables us to determine whether, and if so how, participants with mental illness and/or neurodivergence differ from the reference cohort, both at the group level and at the level of the individual and in terms of cross-diagnostic symptom domains in addition to diagnosis. We show that patients have, on average, a higher frequency of extreme deviations, and have unique spatial distributions depending on the DSM-IV diagnosis and the number of co-occurring diagnoses when models are constructed using the face>shapes task contrast. Models built using the face>baseline task contrast, have, by comparison, greater predictive value for individuals’ functioning across four transdiagnostic domains. We demonstrate the application of the normative modelling framework to task-based functional neuroimaging data, discuss its potential to further our understanding of individual differences in brain function within reference populations, and further validate the clinical relevance of these models.
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- 2023
42. Hybrid model predictive control for sequential decision policies in adaptive behavioral interventions.
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Yuwen Dong, Sunil Deshpande, Daniel E. Rivera, Danielle S. Downs, and Jennifer S. Savage
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- 2014
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43. Hybrid model predictive control for optimizing gestational weight gain behavioral interventions.
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Yuwen Dong, Daniel E. Rivera, Danielle S. Downs, Jennifer S. Savage, Diana M. Thomas, and Linda M. Collins
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- 2013
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44. A dynamical systems model for improving gestational weight gain behavioral interventions.
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Yuwen Dong, Daniel E. Rivera, Diana M. Thomas, Jesús Emeterio Navarro-Barrientos, Danielle S. Downs, Jennifer S. Savage, and Linda M. Collins
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- 2012
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45. The formation and aqueous alteration of CM2 chondrites and their relationship to CO3 chondrites: a fresh isotopic (O, Cd, Cr, Si, Te, Ti and Zn) perspective from the Winchcombe CM2 fall
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R. C. Greenwood, R. Findlay, R. Martins, R. C. J. Steele, K. M. M. Shaw, E. Morton, P. S. Savage, M. E. Murphy, M. Rehkämper, I. A. Franchi, T. Elliott, M. D. Suttle, A. J. King, M. Anand, J. Malley, K. T. Howard, X. Zhao, D. Johnson, M.‐C. Liu, K. A. McCain, N. R. Stephen, University of St Andrews. School of Earth & Environmental Sciences, University of St Andrews. St Andrews Centre for Exoplanet Science, University of St Andrews. St Andrews Isotope Geochemistry, Greenwood, RC [0000-0002-5544-8027], Findlay, R [0000-0001-7794-1819], Martins, R [0000-0003-2453-5942], Steele, RCJ [0000-0003-1406-6855], Shaw, KMM [0000-0002-3847-9382], Morton, E [0000-0001-6208-2388], Savage, PS [0000-0001-8464-0264], Murphy, ME [0000-0003-0385-9526], Rehkämper, M [0000-0002-0075-9872], Franchi, IA [0000-0003-4151-0480], Elliott, T [0000-0002-0984-0191], Suttle, MD [0000-0001-7165-2215], King, AJ [0000-0001-6113-5417], Anand, M [0000-0003-4026-4476], Zhao, X [0000-0003-0268-8139], Johnson, D [0009-0005-7239-412X], Liu, MC [0000-0003-4030-5258], McCain, KA [0000-0002-0811-135X], Stephen, NR [0000-0003-3952-922X], and Apollo - University of Cambridge Repository
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Geophysics ,Space and Planetary Science ,MCP ,NDAS ,5109 Space Sciences ,51 Physical Sciences - Abstract
STFC are acknowledged for supporting the “Curation and Preliminary Examination of the Winchcombe Carbonaceous Chondrite Fall” project (ST/V000799/1), and Natural History Museum staff for curatorial support. Oxygen isotope studies at the Open University are funded by a consolidated grant from the Science and Technology Facilities Council (STFC), UK GRANT NUMBER: ST/T000228/1 (IAF, RCG, JM, MA), and STFC studentship NUMBER: ST/S505614/1 (RF). As part of an integrated consortium study, we have undertaken O, Cd, Cr, Si, Te, Ti, and Zn whole rock isotopic measurements of the Winchcombe CM2 meteorite. δ66Zn values determined for two Winchcombe aliquots are +0.29 ± 0.05‰ (2SD) and +0.45 ± 0.05‰ (2SD). The difference between these analyses likely reflects sample heterogeneity. Zn isotope compositions for Winchcombe show excellent agreement with published CM2 data. δ114Cd for a single Winchcombe aliquot is +0.29 ± 0.04‰ (2SD), which is close to a previous result for Murchison. δ130Te values for three aliquots gave indistinguishable results, with a mean value of +0.62 ± 0.01‰ (2SD) and are essentially identical to published values for CM2s. ε53Cr and ε54Cr for Winchcombe are 0.319 ± 0.029 (2SE) and 0.775 ± 0.067 (2SE), respectively. Based on its Cr isotopic composition, Winchcombe plots close to other CM2 chondrites. ε50Ti and ε46Ti values for Winchcombe are 3.21 ± 0.09 (2SE) and 0.46 ± 0.08 (2SE), respectively, and are in line with recently published data for CM2s. The δ30Si composition of Winchcombe is −0.50 ± 0.06‰ (2SD, n = 11) and is essentially indistinguishable from measurements obtained on other CM2 chondrites. In conformity with petrographic observations, oxygen isotope analyses of both bulk and micromilled fractions from Winchcombe clearly demonstrate that its parent body experienced extensive aqueous alteration. The style of alteration exhibited by Winchcombe is consistent with relatively closed system processes. Analysis of different fractions within Winchcombe broadly support the view that, while different lithologies within an individual CM2 meteorite can be highly variable, each meteorite is characterized by a predominant alteration type. Mixing of different lithologies within a regolith environment to form cataclastic matrix is supported by oxygen isotope analysis of micromilled fractions from Winchcombe. Previously unpublished bulk oxygen isotope data for 12 CM2 chondrites, when combined with published data, define a well‐constrained regression line with a slope of 0.77. Winchcombe analyses define a more limited linear trend at the isotopically heavy, more aqueously altered, end of the slope 0.77 CM2 array. The CM2 slope 0.77 array intersects the oxygen isotope field of CO3 falls, indicating that the unaltered precursor material to the CMs was essentially identical in oxygen isotope composition to the CO3 falls. Our data are consistent with earlier suggestions that the main differences between the CO3s and CM2s reflect differing amounts of water ice that co‐accreted into their respective parent bodies, being high in the case of CM2s and low in the case of CO3s. The small difference in Si isotope compositions between the CM and CO meteorites can be explained by different proportions of matrix versus refractory silicates. CMs and COs may also be indistinguishable with respect to Ti and Cr isotopes; however, further analysis is required to test this possibility. The close relationship between CO3 and CM2 chondrites revealed by our data supports the emerging view that the snow line within protoplanetary disks marks an important zone of planetesimal accretion. Publisher PDF
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- 2023
46. Appraisal of Clinical Care Practices for Child Obesity Treatment. Part I: Interventions
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Asheley C. Skinner, Amanda E. Staiano, Sarah C. Armstrong, Shari L. Barkin, Sandra G. Hassink, Jennifer E. Moore, Jennifer S. Savage, Helene Vilme, Ashley E. Weedn, Janice Liebhart, Jeanne Lindros, and Eileen M. Reilly
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Pediatrics, Perinatology and Child Health - Abstract
The objective of this technical report is to provide clinicians with evidence-based, actionable information upon which to make assessment and treatment decisions for children and adolescents with obesity. In addition, this report will provide an evidence base to inform clinical practice guidelines for the management and treatment of overweight and obesity in children and adolescents. To this end, the goal of this report was to identify all relevant studies to answer 2 overarching key questions: (KQ1) “What are clinically based, effective treatments for obesity?” and (KQ2) “What is the risk of comorbidities among children with obesity?” See Appendix 1 for the conceptual framework and a priori key questions.
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- 2023
47. Appraisal of Clinical Care Practices for Child Obesity Treatment. Part II: Comorbidities
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Asheley C, Skinner, Amanda E, Staiano, Sarah C, Armstrong, Shari L, Barkin, Sandra G, Hassink, Jennifer E, Moore, Jennifer S, Savage, Helene, Vilme, Ashley E, Weedn, Janice, Liebhart, Jeanne, Lindros, and Eileen M, Reilly
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Pediatrics, Perinatology and Child Health - Abstract
The objective of this technical report is to provide clinicians with actionable evidence-based information upon which to make treatment decisions. In addition, this report will provide an evidence base on which to inform clinical practice guidelines for the management and treatment of overweight and obesity in children and adolescents. To this end, the goal of this report was to identify all relevant studies to answer 2 overarching key questions: (KQ1) “What are effective clinically based treatments for obesity?” and (KQ2) “What is the risk of comorbidities among children with obesity?” See Appendix 1 for the conceptual framework and a priori Key Questions.
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- 2023
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48. A mathematical model integrates diverging PXY and MP interactions in cambium development
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Kristine S Bagdassarian, J Peter Etchells, and Natasha S Savage
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Molecular Networks (q-bio.MN) ,FOS: Biological sciences ,Modeling and Simulation ,Cell Behavior (q-bio.CB) ,Quantitative Biology - Cell Behavior ,Quantitative Biology - Molecular Networks ,Plant Science ,Agronomy and Crop Science ,Biochemistry, Genetics and Molecular Biology (miscellaneous) - Abstract
The cambium is a meristematic tissue in plant stems. Here, cell divisions occur that are required for radial growth of plant stems. Daughters of cell divisions within the cambium differentiate into woody xylem cells towards the inside of the stem, or phloem towards the outside. As such, a pattern of xylem-cambium-phloem is present along the radial axis of the stem. A ligand-receptor pair, TDIF-PXY promotes cell division in the cambium, as do the phytohormones, cytokinin and auxin. An auxin response factor, MP, has been proposed to initiate cambial cell divisions by promoting PXY expression, however, MP has also been reported to repress cambial cell divisions later in development where TDIF-PXY complexes are also reported to suppress MP activity. Here, we used a mathematical modelling approach to investigate how MP cell division-promoting activity and cell division-repressing activity might be integrated into the same network as a negative feedback loop. In our model, this feedback loop improved the ability of the cambium to pattern correctly and was found to be required for normal patterning when MP was stable. The implications of this model in early and late cambium development are discussed., Comment: 12 pages with embedded figures & tables in main manuscript, 6 pages with embedded figure in supplement, 4 pages of references
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- 2023
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49. An improved machine learning pipeline for urinary volatiles disease detection: Diagnosing diabetes.
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Andrea S Martinez-Vernon, James A Covington, Ramesh P Arasaradnam, Siavash Esfahani, Nicola O'Connell, Ioannis Kyrou, and Richard S Savage
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Medicine ,Science - Abstract
MOTIVATION:The measurement of disease biomarkers in easily-obtained bodily fluids has opened the door to a new type of non-invasive medical diagnostics. New technologies are being developed and fine-tuned in order to make this possibility a reality. One such technology is Field Asymmetric Ion Mobility Spectrometry (FAIMS), which allows the measurement of volatile organic compounds (VOCs) in biological samples such as urine. These VOCs are known to contain a range of information on the relevant person's metabolism and can in principle be used for disease diagnostic purposes. Key to the effective use of such data are well-developed data processing pipelines, which are necessary to extract the most useful data from the complex underlying biological structure. RESULTS:In this study, we present a new data analysis pipeline for FAIMS data, and demonstrate a number of improvements over previously used methods. We evaluate the effect of a series of candidate operational steps during data processing, such as the use of wavelet transforms, principal component analysis (PCA), and classifier ensembles. We also demonstrate the use of FAIMS data in our pipeline to diagnose diabetes on the basis of a simple urine sample using machine learning classifiers. We present results for data generated from a case-control study of 115 urine samples, collected from 72 type II diabetic patients, with 43 healthy volunteers as negative controls. The resulting pipeline combines the steps that resulted in the best classification model performance. These include the use of a two-dimensional discrete wavelet transform, and the Wilcoxon rank-sum test for feature selection. We are able to achieve a best ROC curve AUC of 0.825 (0.747-0.9, 95% CI) for classification of diabetes vs control. We also note that this result is robust to changes in the data pipeline and different analysis runs, with AUC > 0.80 achieved in a range of cases. This is a substantial improvement in performance over previously used data processing methods in this area. Our ability to make strong statements about FAIMS ability to diagnose diabetes is sadly limited, as we found confounding effects from the demographics when including these data in the pipeline. The demographics alone produced a best AUC of 0.87 (0.795-0.94, 95% CI). While the combination of the demographics and FAIMS data resulted in an improvement on the AUC (0.907; 0.848-0.97, 95% CI), it did not prove to be a significant difference. Nevertheless, the pipeline itself shows a significant improvement in performance over more basic methods which have been used with FAIMS data in the past.
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- 2018
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50. Gestational Weight Gain Intervention Impacts Determinants of Healthy Eating and Exercise in Overweight/Obese Pregnant Women
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Abigail M. Pauley, Emily Hohman, Jennifer S. Savage, Daniel E. Rivera, Penghong Guo, Krista S. Leonard, and Danielle Symons Downs
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Internal medicine ,RC31-1245 - Abstract
High gestational weight gain (GWG) in overweight/obese pregnant women increases maternal-fetal complications. We conducted a 6-week GWG intervention based on an energy balance model that includes theories of planned behavior (TPB) and self-regulation constructs to promote exercise and healthy eating motivation and behaviors. The purposes of this proof-of-concept feasibility study were to examine: (1) the energy balance model constructs over the intervention, and (2) pre-post intervention, weekly, and dose-response changes in study constructs. Methods. Overweight/obese pregnant women (N=17) were randomized to 1 of 6 conditions, increasing in intensity, and included varied combinations of components (exercise sessions, healthy eating demonstrations, etc.). Exercise and healthy eating TPB (attitude, subjective norm, perceived behavioral control, intention), and self-regulation (prospective, retrospective) constructs were collected weekly. Exercise behavior, energy intake, and GWG were collected daily. Results. We observed: (a) significant increases in exercise TPB constructs, healthy eating attitude (limit unhealthy foods), exercise/healthy eating retrospective self-regulation; (b) significant decrease in healthy eating subjective norm (limit unhealthy foods); (c) trending increases for healthy eating perceived behavioral control (limit unhealthy foods), healthy eating prospective self-regulation, and energy intake; (d) significantly higher active time, steps, and energy expenditure at W3 relative to other weeks; (e) no significant increase in GWG; and, (f) a dose response effect such that women in more intensive dosages had greater gains in exercise and healthy eating perceived behavioral control (eat healthy/limit unhealthy foods). Conclusion. Brief exposure to a theoretically-driven, GWG intervention resulted in changes to exercise and healthy eating TPB and self-regulation motivational determinants, no significant increase in GWG, and suggests intervention intensity can strengthen perceived ability to engage in exercise/healthy eating behaviors; offering initial proof-of-concept for the intervention to regulate GWG in overweight/obese pregnant women. Future research will test this intervention over the course of pregnancy to understand long-term impact on maternal-fetal health outcomes.
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- 2018
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