62 results on '"Ryan S. Gray"'
Search Results
2. Coding Variants Coupled With Rapid Modeling in Zebrafish Implicate Dynein Genes, dnaaf1 and zmynd10, as Adolescent Idiopathic Scoliosis Candidate Genes
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Yunjia Wang, Zhenhao Liu, Guanteng Yang, Qile Gao, Lige Xiao, Jiong Li, Chaofeng Guo, Benjamin R. Troutwine, Ryan S. Gray, Lu Xie, and Hongqi Zhang
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adolescent idiopathic scoliosis ,whole exome sequencing ,southern Chinese population ,genetic variations ,bioinformatics analysis ,gene knockout ,Biology (General) ,QH301-705.5 - Abstract
Adolescent idiopathic scoliosis (AIS) is the most common pediatric spine disorder affecting ∼3% of children worldwide. Human genetic studies suggest a complex polygenic disease model for AIS with large genetic and phenotypic heterogeneity. However, the overall genetic etiology of AIS remains poorly understood. To identify additional AIS susceptibility loci, we performed whole-exome sequencing (WES) on a cohort of 195 Southern Chinese AIS patients. Bioinformatics analysis identified 237 novel rare variants associated with AIS, located in 232 new susceptibility loci. Enrichment analysis of these variants revealed 10 gene families associated with our AIS cohort. We screened these gene families by comparing our candidate gene list with IS candidate genes in the Human Phenotype Ontology (HPO) database and previous reported studies. Two candidate gene families, axonemal dynein and axonemal dynein assembly factors, were retained for their associations with ciliary architecture and function. The damaging effects of candidate variants in dynein genes dnali1, dnah1, dnaaf, and zmynd10, as well as in one fibrillin-related gene tns1, were functionally analyzed in zebrafish using targeted CRISPR/Cas9 screening. Knockout of two candidate genes, dnaaf1 or zmynd10, recapitulated scoliosis in viable adult zebrafish. Altogether, our results suggest that the disruption of one or more dynein-associated factors may correlate with AIS susceptibility in the Southern Chinese population.
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- 2020
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3. A missense variant in SLC39A8 is associated with severe idiopathic scoliosis
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Gabe Haller, Kevin McCall, Supak Jenkitkasemwong, Brooke Sadler, Lilian Antunes, Momchil Nikolov, Julia Whittle, Zachary Upshaw, Jimann Shin, Erin Baschal, Carlos Cruchaga, Matthew Harms, Cathleen Raggio, Jose A. Morcuende, Philip Giampietro, Nancy H. Miller, Carol Wise, Ryan S. Gray, Lila Solnica-Krezel, Mitchell Knutson, Matthew B. Dobbs, and Christina A. Gurnett
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Science - Abstract
The majority of scoliosis is considered idiopathic with onset in adolescence (AIS) and has a genetic contribution. Here, the authors perform an exome wide association study of data from 457 severe AIS cases and 987 controls, and find a missense variant in SLC39A8 is associated with AIS.
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- 2018
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4. Whole Genome Sequencing-Based Mapping and Candidate Identification of Mutations from Fixed Zebrafish Tissue
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Nicholas E. Sanchez, Breanne L. Harty, Thomas O’Reilly-Pol, Sarah D. Ackerman, Amy L. Herbert, Melanie Holmgren, Stephen L. Johnson, Ryan S. Gray, and Kelly R. Monk
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zebrafish ,whole genome sequencing ,mapping ,linkage ,genetic screen ,fixed tissue sequencing ,Genetics ,QH426-470 - Abstract
As forward genetic screens in zebrafish become more common, the number of mutants that cannot be identified by gross morphology or through transgenic approaches, such as many nervous system defects, has also increased. Screening for these difficult-to-visualize phenotypes demands techniques such as whole-mount in situ hybridization (WISH) or antibody staining, which require tissue fixation. To date, fixed tissue has not been amenable for generating libraries for whole genome sequencing (WGS). Here, we describe a method for using genomic DNA from fixed tissue and a bioinformatics suite for WGS-based mapping of zebrafish mutants. We tested our protocol using two known zebrafish mutant alleles, gpr126st49 and egr2bfh227, both of which cause myelin defects. As further proof of concept we mapped a novel mutation, stl64, identified in a zebrafish WISH screen for myelination defects. We linked stl64 to chromosome 1 and identified a candidate nonsense mutation in the F-box and WD repeat domain containing 7 (fbxw7) gene. Importantly, stl64 mutants phenocopy previously described fbxw7vu56 mutants, and knockdown of fbxw7 in wild-type animals produced similar defects, demonstrating that stl64 disrupts fbxw7. Together, these data show that our mapping protocol can map and identify causative lesions in mutant screens that require tissue fixation for phenotypic analysis.
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- 2017
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5. Regulation of terminal hypertrophic chondrocyte differentiation in Prmt5 mutant mice modeling infantile idiopathic scoliosis
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Zhaoyang Liu, Janani Ramachandran, Steven A. Vokes, and Ryan S. Gray
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infantile scoliosis ,prmt5 ,chondrocyte terminal differentiation ,endochondral ossification ,Medicine ,Pathology ,RB1-214 - Abstract
Idiopathic scoliosis (IS) is the most common type of musculoskeletal defect affecting children worldwide, and is classified by age of onset, location and degree of spine curvature. Although rare, IS with onset during infancy is the more severe and rapidly progressive form of the disease, associated with increased mortality due to significant respiratory compromise. The pathophysiology of IS, in particular for infantile IS, remains elusive. Here, we demonstrate the role of PRMT5 in the infantile IS phenotype in mouse. Conditional genetic ablation of PRMT5 in osteochondral progenitors results in impaired terminal hypertrophic chondrocyte differentiation and asymmetric defects of endochondral bone formation in the perinatal spine. Analysis of these several markers of endochondral ossification revealed increased type X collagen (COLX) and Ihh expression, coupled with a dramatic reduction in Mmp13 and RUNX2 expression, in the vertebral growth plate and in regions of the intervertebral disc in the Prmt5 conditional mutant mice. We also demonstrate that PRMT5 has a continuous role in the intervertebral disc and vertebral growth plate in adult mice. Altogether, our results establish PRMT5 as a critical promoter of terminal hypertrophic chondrocyte differentiation and endochondral bone formation during spine development and homeostasis. This article has an associated First Person interview with the first author of the paper.
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- 2019
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6. An adhesion G protein-coupled receptor is required in cartilaginous and dense connective tissues to maintain spine alignment
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Zhaoyang Liu, Amro A Hussien, Yunjia Wang, Terry Heckmann, Roberto Gonzalez, Courtney M Karner, Jess G Snedeker, and Ryan S Gray
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GPCR ,scoliosis ,intervertebral disc ,tendon biomechanics ,mouse ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Adolescent idiopathic scoliosis (AIS) is the most common spine disorder affecting children worldwide, yet little is known about the pathogenesis of this disorder. Here, we demonstrate that genetic regulation of structural components of the axial skeleton, the intervertebral discs, and dense connective tissues (i.e., ligaments and tendons) is essential for the maintenance of spinal alignment. We show that the adhesion G protein-coupled receptor ADGRG6, previously implicated in human AIS association studies, is required in these tissues to maintain typical spine alignment in mice. Furthermore, we show that ADGRG6 regulates biomechanical properties of tendon and stimulates CREB signaling governing gene expression in cartilaginous tissues of the spine. Treatment with a cAMP agonist could mirror aspects of receptor function in culture, thus defining core pathways for regulating these axial cartilaginous and connective tissues. As ADGRG6 is a key gene involved in human AIS, these findings open up novel therapeutic opportunities for human scoliosis.
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- 2021
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7. Genetic animal modeling for idiopathic scoliosis research: history and considerations
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Elizabeth A. Terhune, Anna M. Monley, Melissa T. Cuevas, Cambria I. Wethey, Ryan S. Gray, and Nancy Hadley-Miller
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Orthopedics and Sports Medicine - Published
- 2022
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8. The axonemal dynein heavy chain 10 gene is essential for monocilia motility and spine alignment in zebrafish
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Yunjia Wang, Benjamin R. Troutwine, Hongqi Zhang, and Ryan S. Gray
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Axonemal Dyneins ,Cell Biology ,Zebrafish Proteins ,Spine ,Article ,Disease Models, Animal ,Scoliosis ,Cell Movement ,Morphogenesis ,Animals ,Cilia ,Molecular Biology ,Zebrafish ,Developmental Biology - Abstract
Adolescent idiopathic scoliosis (AIS) is a common pediatric musculoskeletal disorder worldwide, characterized by atypical spine curvatures in otherwise healthy children. Human genetic studies have identified candidate genes associated with AIS, however, only a few of these have been shown to recapitulate adult-viable scoliosis in animal models. Using an F0 CRISPR screening approach in zebrafish, we demonstrate that disruption of the dynein axonemal heavy chain 10 (dnah10) gene results in recessive adult-viable scoliosis in zebrafish. Using a stably segregating dnah10 mutant zebrafish, we showed that the ependymal monocilia lining the hindbrain and spinal canal displayed reduced beat frequency, which was correlated with the disassembly of the Reissner fiber and the onset of body curvatures. Taken together, these results suggest that monocilia function in larval zebrafish contributes to the polymerization of the Reissner fiber and straightening of the body axis.
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- 2022
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9. The Reissner fiber under tension in vivo shows dynamic interaction with ciliated cells contacting the cerebrospinal fluid
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Celine Bellegarda, Guillaume Zavard, Lionel Moisan, Ryan S. Gray, Françoise Brochard-Wyart, Jean-François Joanny, Yasmine Cantaut-Belarif, and Claire Wyart
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The Reissner fiber (RF) is an acellular thread positioned in the midline of the central canal that aggregates thanks to the beating of numerous cilia from ependymal radial glial cells (ERGs) generating flow in the central canal of the spinal cord. RF together with cerebrospinal fluid (CSF)-contacting neurons (CSF-cNs) forms an axial sensory system detecting curvature. How RF, CSF-cNs and the multitude of motile cilia from ERGs interactin vivoappears critical for maintenance of RF and sensory functions of CSF-cNs to keep a straight body axis but is not well-understood. Usingin vivoimaging in larval zebrafish, we show that RF is under tension and resonates dorsoventrally. Focal RF ablations trigger retraction and relaxation of the fiber cut ends, with larger retraction speeds for rostral ablations. We built a mechanical model that estimates RF stress diffusion coefficient at 4 mm2/ s and reveals that tension builds up rostrally along the fiber. After RF ablation, CSF-cN spontaneous activity decreased and ciliary motility changed, suggesting physical interactions between RF and cilia projecting into the central canal. We observed that motile cilia were caudally-tilted and frequently interacted with RF. We propose that the numerous ependymal motile monocilia contribute to RF heterogenous tension via weak interactions. Our work demonstrates that under tension, the Reissner fiber dynamically interacts with motile cilia generating CSF flow and spinal sensory neurons.
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- 2023
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10. Kif6 regulates cilia motility and polarity in brain ependymal cells
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Maki Takagishi, Yang Yue, Ryan S. Gray, Kristen J. Verhey, and John B. Wallingford
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Article - Abstract
Ependymal cells, lining brain ventricular walls, display tufts of cilia that beat in concert promoting laminar Cerebrospinal fluid (CSF) flow within brain ventricles. The ciliary axonemes of multiciliated ependymal cells display a 9+2 microtubule array common to motile cilia. Dyneins and kinesins are ATPase microtubule motor proteins that promote the rhythmic beating of cilia axonemes. Despite common consensus about the importance of axonemal dynein motor proteins, little is known about how Kinesin motors contribute to cilia motility. Here, we define the function of Kinesin family member 6 (Kif6) using a mutation that lacks a highly conserved C-terminal tail domain (Kif6p.G555fs) and which displays progressive hydrocephalus in mice. An analogous mutation was isolated in a proband displaying macrocephaly, hypotonia, and seizures implicating an evolutionarily conserved function for Kif6 in neurodevelopment. We find that loss of Kif6 function caused decreased ependymal cilia motility and subsequently decreased fluid flow on the surface of brain ventricular walls. Kif6 protein was localized at ependymal cilia and displayed processive motor movement (676 nm/s) on microtubulesin vitro. Loss of the Kif6 C-terminal tail domain did not affect the initial ciliogenesisin vivo, but did result in defects in cilia orientation, the formation of robust apical actin networks, and stabilization of basal bodies at the apical surface. This suggests a novel role for the Kif6 motor in maintenance of ciliary homeostasis of ependymal cells.Summary statementWe found that Kif6 is localized to the axonemes of ependymal cells. In vitro analysis shows that Kif6 moves on microtubules and that its loss mice decrease cilia motility and cilia-driven flow, resulting in hydrocephalus.
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- 2023
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11. Screening Sperm for the Rapid Isolation of Germline Edits in Zebrafish
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Ryan S. Gray, Ryoko Minowa, and Brittney Voigt
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General Immunology and Microbiology ,General Chemical Engineering ,General Neuroscience ,General Biochemistry, Genetics and Molecular Biology - Published
- 2023
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12. Mutations in KIF7 implicated in idiopathic scoliosis in humans and axial curvatures in zebrafish
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Melisa N. Bayrak, Xiaomi Chen, Morgan R. Bland, Matthew R.G. Taylor, Lilian Antunes, Maria V. Cattell, Ryan S. Gray, Christina A. Gurnett, Lee Niswander, Erin E. Baschal, Melissa T Cuevas, Matthew B. Dobbs, Kenneth L. Jones, Nancy H. Miller, Bruce Appel, Cambria I Wethey, Anna M. Monley, Brittan S Sutphin, George Devon Trahan, and Elizabeth A Terhune
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Mutant ,Kinesins ,Article ,Pathogenesis ,03 medical and health sciences ,Genetics ,Animals ,Humans ,Cilia ,Zebrafish ,Gene ,Hedgehog ,Genetics (clinical) ,Exome sequencing ,030304 developmental biology ,0303 health sciences ,biology ,Cilium ,030305 genetics & heredity ,Zebrafish Proteins ,biology.organism_classification ,Phenotype ,Scoliosis ,Mutation - Abstract
Idiopathic scoliosis (IS) is a spinal disorder affecting up to 3% of otherwise healthy children. IS has a strong familial genetic component and is believed to be genetically complex due to significant variability in phenotype and heritability. Previous studies identified putative loci and variants possibly contributing to IS susceptibility, including within ECM, cilia and actin networks, but the genetic architecture and underlying mechanisms remains unresolved. Here, we used whole exome sequencing from three affected individuals in a multigenerational family with IS and identified 19 uncommon variants (MAF C, rs142032413) within the ciliary gene KIF7, a regulator within the hedgehog (Hh) signaling pathway. Resequencing of a second cohort of unrelated IS individuals and controls identified several severe mutations in KIF7 in affected individuals only. Subsequently, we generated a mutant zebrafish model of kif7 using CRISPR-Cas9. kif7(co63/co63) zebrafish displayed severe scoliosis, presenting in juveniles and progressing through adulthood. We observed no deformities in the brain, Reissner fiber, or central canal cilia in kif7(co63/co63) embryos, although alterations were seen in Hh pathway gene expression. This research suggests defects in KIF7-dependent Hh signaling may drive pathogenesis in a subset of individuals with IS.
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- 2021
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13. ADGRG6 promotes adipogenesis and is involved in sex-specific fat distribution
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Hai P. Nguyen, Aki Ushiki, Rory Sheng, Cassidy Biellak, Kelly An, Hélène Choquet, Thomas J. Hoffman, Ryan S. Gray, and Nadav Ahituv
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Fat distribution differences between males and females are a major risk factor for metabolic disease, but their genetic etiology remains largely unknown. Here, we establish ADGRG6 as a major factor in adipogenesis and gender fat distribution. Deletion of ADGRG6 in human adipocytes impairs adipogenesis due to reduced cAMP signaling. Conditionally knocking out Adgrg6 in mouse adipocytes or deleting an intronic enhancer associated with gender fat distribution generates males with female-like fat deposition, which are protected against high-fat-diet-induced obesity and have improved insulin response. To showcase its therapeutic potential, we demonstrate that CRISPRi targeting of the Adgrg6 promoter or enhancer prevents high-fat-diet-induced obesity. Combined, our results associate ADGRG6 as a gender fat distribution gene and highlight its potential as a therapeutic target for metabolic disease.
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- 2022
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14. A comparative study of the turnover of multiciliated cells in the mouse trachea, oviduct, and brain
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Mia J. Konjikusic, Ngan Kim Tran, Ryan S. Gray, John B. Wallingford, Rebecca D. Fitch, and Elle C. Roberson
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0301 basic medicine ,Ependymal Cell ,Green Fluorescent Proteins ,Population ,Lumen (anatomy) ,Oviducts ,Biology ,Epithelium ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Homeostasis ,Cilia ,Mouse Trachea ,education ,Alleles ,030304 developmental biology ,Brain Ventricle ,0303 health sciences ,education.field_of_study ,Gene Expression Profiling ,Cilium ,Brain ,Gene Expression Regulation, Developmental ,Cell Differentiation ,Epithelial Cells ,Cell biology ,Trachea ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Oviduct ,Female ,Extended time ,030217 neurology & neurosurgery ,Signal Transduction ,Developmental Biology - Abstract
In mammals, multiciliated cells (MCCs) line the lumen of the trachea, oviduct, and brain ventricles, where they drive fluid flow across the epithelium. Each MCC population experiences vastly different local environments that may dictate differences in their lifetime and turnover rates. However, with the exception of MCCs in the trachea, the turnover rates of these multiciliated epithelial populations at extended time scales are not well described. Here, using genetic lineage-labeling techniques we provide a direct comparison of turnover rates of MCCs in these three different tissues. We find that oviduct turnover is similar to that in the airway (∼6 months), while multiciliated ependymal cells turnover more slowly.
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- 2020
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15. Kif9 is an active kinesin motor required for ciliary beating and proximodistal patterning of motile axonemes
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Mia J. Konjikusic, Kristen J. Verhey, v. prakash, Ryan S. Gray, John B. Wallingford, Chanjae Lee, y. yang, m. nguimtsop, Steven L. Brody, B. Shrestha, and Amjad Horani
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Axoneme ,biology ,Chemistry ,Xenopus ,Chlamydomonas ,Dyneins ,Kinesins ,Processivity ,Cell Biology ,Flagellum ,biology.organism_classification ,Microtubules ,Cell biology ,Radial spoke ,Microtubule ,Flagella ,Motile cilium ,Kinesin ,Animals ,Cilia ,Research Article - Abstract
Most motile cilia have a stereotyped structure of nine microtubule outer doublets and a single central pair of microtubules. The central pair microtubules are surrounded by a set of proteins, termed the central pair apparatus. A specific kinesin, Klp1 projects from the central pair and contributes to ciliary motility in Chlamydomonas. The vertebrate orthologue, Kif9 is required for beating in mouse sperm flagella, but the mechanism of Kif9/Klp1 function remains poorly defined. Here, using Xenopus epidermal multiciliated cells, we show that Kif9 is necessary for ciliary motility as well as leads to defects in the distal localization of not only central pair proteins, but also radial spokes and dynein arms. In addition, single-molecule assays in vitro revealed that Xenopus Kif9 is a processive motor, though like axonemal dyneins it displays no processivity in ciliary axonemes in vivo. Thus, our data suggest that Kif9 plays both indirect and direct role in ciliary motility.
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- 2021
16. An adhesion G protein-coupled receptor is required in cartilaginous and dense connective tissues to maintain spine alignment
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Ryan S. Gray, Jess G. Snedeker, Terry Heckmann, Roberto Gonzalez, Zhaoyang Liu, Amro A Hussien, Yunjia Wang, Courtney M. Karner, University of Zurich, and Gray, Ryan S
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Male ,0301 basic medicine ,Adhesion (medicine) ,Receptors, G-Protein-Coupled ,tendon biomechanics ,Tendons ,Mice ,GPCR ,0302 clinical medicine ,2400 General Immunology and Microbiology ,Biology (General) ,Receptor ,General Neuroscience ,2800 General Neuroscience ,General Medicine ,CREB-Binding Protein ,Biomechanical Phenomena ,Cell biology ,Tendon ,medicine.anatomical_structure ,Medicine ,Female ,10046 Balgrist University Hospital, Swiss Spinal Cord Injury Center ,Research Article ,Axial skeleton ,QH301-705.5 ,Science ,610 Medicine & health ,Biology ,CREB ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,1300 General Biochemistry, Genetics and Molecular Biology ,Cartilaginous Tissue ,medicine ,Animals ,mouse ,G protein-coupled receptor ,scoliosis ,General Immunology and Microbiology ,Intervertebral disc ,medicine.disease ,Spine ,Cartilage ,030104 developmental biology ,biology.protein ,intervertebral disc ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Adolescent idiopathic scoliosis (AIS) is the most common spine disorder affecting children worldwide, yet little is known about the pathogenesis of this disorder. Here, we demonstrate that genetic regulation of structural components of the axial skeleton, the intervertebral discs, and dense connective tissues (i.e., ligaments and tendons) is essential for the maintenance of spinal alignment. We show that the adhesion G protein-coupled receptor ADGRG6, previously implicated in human AIS association studies, is required in these tissues to maintain typical spine alignment in mice. Furthermore, we show that ADGRG6 regulates biomechanical properties of tendon and stimulates CREB signaling governing gene expression in cartilaginous tissues of the spine. Treatment with a cAMP agonist could mirror aspects of receptor function in culture, thus defining core pathways for regulating these axial cartilaginous and connective tissues. As ADGRG6 is a key gene involved in human AIS, these findings open up novel therapeutic opportunities for human scoliosis., eLife, 10, ISSN:2050-084X
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- 2021
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17. Author response: An adhesion G protein-coupled receptor is required in cartilaginous and dense connective tissues to maintain spine alignment
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Courtney M. Karner, Ryan S. Gray, Amro A Hussien, Zhaoyang Liu, Yunjia Wang, Terry Heckmann, Jess G. Snedeker, and Roberto Gonzalez
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Chemistry ,Adhesion ,G protein-coupled receptor ,SPINE (molecular biology) ,Cell biology - Published
- 2021
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18. Zebrafish: An Emerging Model for Orthopedic Research
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Ronald Y. Kwon, Ryan S. Gray, Björn Busse, Matthew P. Harris, and Jenna L. Galloway
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030203 arthritis & rheumatology ,Candidate gene ,medicine.medical_specialty ,biology ,Musculoskeletal Development ,0206 medical engineering ,Genetic variants ,02 engineering and technology ,Computational biology ,biology.organism_classification ,020601 biomedical engineering ,Article ,Skeletal tissue ,03 medical and health sciences ,0302 clinical medicine ,Skeletal disease ,Models, Animal ,Genetic variation ,Orthopedic surgery ,medicine ,Animals ,Orthopedics and Sports Medicine ,Zebrafish - Abstract
Advances in next-generation sequencing have transformed our ability to identify genetic variants associated with clinical disorders of the musculoskeletal system. However, the means to functionally validate and analyze the physiological repercussions of genetic variation have lagged behind the rate of genetic discovery. The zebrafish provides an efficient model to leverage genetic analysis in an in vivo context. Its utility for orthopedic research is becoming evident in regard to both candidate gene validation as well as therapeutic discovery in tissues such as bone, tendon, muscle, and cartilage. With the development of new genetic and analytical tools to better assay aspects of skeletal tissue morphology, mineralization, composition, and biomechanics, researchers are emboldened to systematically approach how the skeleton develops and to identify the root causes, and potential treatments, of skeletal disease. © 2019 Orthopaedic Research Society. Published by Wiley Periodicals, Inc. J Orthop Res 38:925-936, 2020.
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- 2019
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19. PRMT5 is necessary to form distinct cartilage identities in the knee and long bone
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Steven A. Vokes, Ryan S. Gray, Zhaoyang Liu, and Janani Ramachandran
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Cartilage, Articular ,Male ,Protein-Arginine N-Methyltransferases ,Limb Buds ,Long bone ,Biology ,Bone and Bones ,Article ,Chondrocyte ,Mice ,03 medical and health sciences ,Chondrocytes ,0302 clinical medicine ,medicine ,Animals ,Progenitor cell ,Molecular Biology ,030304 developmental biology ,Progenitor ,0303 health sciences ,Bone Development ,Stem Cells ,Cartilage ,Protein arginine methyltransferase 5 ,Gene Expression Regulation, Developmental ,Cell Differentiation ,Patella ,Cell Biology ,Chondrogenesis ,Hindlimb ,Cell biology ,medicine.anatomical_structure ,Female ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
During skeletal development, limb progenitors become specified as chondrocytes and subsequently differentiate into specialized cartilage compartments. We previously showed that the arginine dimethyl transferase, PRMT5, is essential for regulating the specification of progenitor cells into chondrocytes within early limb buds. Here, we report that PRMT5 regulates the survival of a separate progenitor domain that gives rise to the patella. Independent of its role in knee development, PRMT5 regulates several distinct types of chondrocyte differentiation within the long bones. Chondrocytes lacking PRMT5 have a striking blockage in hypertrophic chondrocyte differentiation and are marked by abnormal gene expression. PRMT5 remains important for articular cartilage and hypertrophic cell identity during adult stages, indicating an ongoing role in homeostasis of these tissues. We conclude that PRMT5 is required for distinct steps of early and late chondrogenic specialization and is thus a critical component of multiple aspects of long bone development and maintenance.
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- 2019
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20. Genetic animal modeling for idiopathic scoliosis research: history and considerations
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Elizabeth A, Terhune, Anna M, Monley, Melissa T, Cuevas, Cambria I, Wethey, Ryan S, Gray, and Nancy, Hadley-Miller
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Scoliosis ,Animals ,Humans ,Child ,Spinal Curvatures - Abstract
Idiopathic scoliosis (IS) is defined as a structural lateral spinal curvature ≥ 10° in otherwise healthy children and is the most common pediatric spinal deformity. IS is known to have a strong genetic component; however, the underlying etiology is still largely unknown. Animal models have been used historically to both understand and develop treatments for human disease, including within the context of IS. This intended audience for this review is clinicians in the fields of musculoskeletal surgery and research.In this review article, we synthesize current literature of genetic animal models of IS and introduce considerations for researchers.Due to complex genetic and unique biomechanical factors (i.e., bipedalism) hypothesized to contribute to IS in humans, scoliosis is a difficult condition to replicate in model organisms.We advocate careful selection of animal models based on the scientific question and introduce gaps and limitations in the current literature. We advocate future research efforts to include animal models with multiple characterized genetic or environmental perturbations to reflect current understanding of the human condition.
- Published
- 2021
21. A G protein-coupled receptor is required in cartilaginous and dense connective tissues to maintain spine alignment
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Zhaoyang Liu, Yunjia Wang, Terry Heckmann, Amro A. Hussien, Ryan S. Gray, Roberto Gonzalez, Jess G. Snedeker, and Courtney M. Karner
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Axial skeleton ,biology ,Anatomy ,Scoliosis ,CREB ,medicine.disease ,Tendon ,Spine (zoology) ,medicine.anatomical_structure ,biology.protein ,medicine ,Cartilaginous Tissue ,Receptor ,G protein-coupled receptor - Abstract
SummaryAdolescent idiopathic scoliosis (AIS) is the most common spine disorder affecting children worldwide, yet little is known about the pathogenesis of this disorder. Here, we demonstrate that genetic regulation of structural components of the axial skeleton, the intervertebral discs and dense connective tissues (e.g., ligaments and tendons), are essential for maintenance of spinal alignment. We show that the G-coupled protein receptorAdgrg6, previously implicated in human AIS association studies, is required in these tissues to maintain typical spine morphology. We show thatAdgrg6regulates biomechanical properties of tendon and stimulates CREB signaling governing gene expression in cartilaginous tissues of the spine. Treatment with an cAMP agonist was able to mirror aspects of receptor function in culture defining core pathways for regulation of these axial connective tissues. AsADGRG6is a key gene involved in human AIS, these findings open up novel therapeutic opportunities for human scoliosis.HighlightsKnockout mice lackingAdgrg6function in the tendons and ligaments of the spine develop perinatal-onset thoracic scoliosis.Loss ofAdgrg6function in cartilaginous tissues of the discs contribute to the incidence and severity of scoliosis.The loss ofAdgrg6function in spine tissues provide a model of construct validity for human adolescent idiopathic scoliosisFine tuning of the biomechanical properties of dense connective tissues is essential for maintaining spine alignment.
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- 2021
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22. Decision letter: In vivo proximity labeling identifies cardiomyocyte protein networks during zebrafish heart regeneration
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Ryan S. Gray and Lilianna Solnica-Krezel
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In vivo ,Regeneration (biology) ,Biology ,biology.organism_classification ,Protein network ,Zebrafish ,Cell biology - Published
- 2021
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23. Rare coding variants in axonemal dynein heavy chain genes are associated with adolescent idiopathic scoliosis
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Jiong Li, Chaofeng Guo, Zhenhao Liu, Hongqi Zhang, Elizabeth Terune, Guanteng Yang, Lige Xiao, Mingxing Tang, Shuhua Xu, Yunjia Wang, Lu Xie, Ryan S. Gray, Yang Gao, Cambria I Wethey, Nancy H. Miller, Hao Chen, and Benjamin R. Troutwine
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Genetics ,Axonemal dynein heavy chain ,Idiopathic scoliosis ,Biology ,Gene - Abstract
Adolescent idiopathic scoliosis (AIS) is the most common pediatric musculoskeletal disorder worldwide, characterized by atypical spine curvatures in otherwise healthy children. Human genetic studies have identified candidate genes associated with AIS, however, only a few of these genes have been shown to recapitulate adult-viable scoliosis in animal models. To further define susceptibility loci for AIS, we performed whole exome sequencing on a cohort of 195 Han Chinese AIS patients and 229 healthy controls. We identified members of the axonemal dynein family associated with both sporadic and familial AIS. We demonstrate that disruption of the dynein axonemal heavy chain 10 (dnah10) gene results in recessive adult-viable scoliosis in zebrafish. These dnah10 mutant zebrafish display reduced ependymal cilia beating and a disassembly of the Reissner fiber in the hindbrain and spinal canal, concurrent with the onset of body curvatures. Altogther, these results demonstrate that mutations in axonemal dynein genes are linked with human AIS and suggest that ependymal cell cilia function plays an essential role in maintaining spine alignment in humans.
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- 2020
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24. Development of a straight vertebrate body axis
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Michel Bagnat and Ryan S. Gray
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Notochord ,Review ,Biology ,03 medical and health sciences ,0302 clinical medicine ,Body axis ,biology.animal ,Morphogenesis ,medicine ,Animals ,Molecular Biology ,Zebrafish ,Body Patterning ,030304 developmental biology ,0303 health sciences ,Vertebrate ,biology.organism_classification ,Spine ,Spine (zoology) ,Body plan ,medicine.anatomical_structure ,Scoliosis ,Vertebrates ,Neuroscience ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
The vertebrate body plan is characterized by the presence of a segmented spine along its main axis. Here, we examine the current understanding of how the axial tissues that are formed during embryonic development give rise to the adult spine and summarize recent advances in the field, largely focused on recent studies in zebrafish, with comparisons to amniotes where appropriate. We discuss recent work illuminating the genetics and biological mechanisms mediating extension and straightening of the body axis during development, and highlight open questions. We specifically focus on the processes of notochord development and cerebrospinal fluid physiology, and how defects in those processes may lead to scoliosis.
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- 2020
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25. Postembryonic screen for mutations affecting spine development in zebrafish
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Ryan S. Gray, Johanna F. Griest, Benjamin R. Troutwine, Kelly R. Monk, Sarah D. Ackerman, Stephen Canter, Melisa N. Bayrak, Ryoko Minowa, Lilianna Solnica-Krezel, Diane S. Sepich, and Roberto Gonzalez
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musculoskeletal diseases ,Nervous system ,Embryo, Nonmammalian ,Neurogenesis ,Idiopathic scoliosis ,03 medical and health sciences ,0302 clinical medicine ,Muscle attachment ,Animals ,Humans ,Medicine ,Molecular Biology ,Zebrafish ,Germ-Line Mutation ,030304 developmental biology ,0303 health sciences ,Genome ,biology ,business.industry ,Cartilage ,Cell Biology ,Anatomy ,Zebrafish Proteins ,musculoskeletal system ,biology.organism_classification ,Spinal cord ,Spine ,Spine (zoology) ,medicine.anatomical_structure ,Body plan ,business ,030217 neurology & neurosurgery ,Vertebral column ,Developmental Biology - Abstract
The spinal vertebral column gives structural support for the adult body plan, protects the spinal cord, and provides muscle attachment and stability, which allows the animal to move within its environment. The development and maturation of the spine and its physiology involve the integration of multiple musculoskeletal tissues including bone, cartilage, and fibrocartilaginous joints, as well as innervation and control by the nervous system. One of the most common disorders of the spine in human is adolescent idiopathic scoliosis (AIS), which is characterized by the onset of an abnormal lateral curvature of the spine of N-ethylN-nitrosourea (ENU) were transmitted and screened for dominant phenotypes in 1,229 F1 animals, and subsequently bred to homozygosity in F3 families, from these, 314 haploid genomes were screened for recessive phenotypes. We cumulatively found 39 adult-viable (3 dominant and 36 recessive) mutations each leading to a defect in the morphogenesis of the spine. The largest phenotypic group displayed larval onset axial curvatures, leading to whole-body scoliosis without vertebral dysplasia in adult fish. Pairwise complementation testing within this phenotypic group revealed at least 16 independent mutant loci. Using massively-parallel whole genome or whole exome sequencing and meiotic mapping we defined the molecular identity of several loci for larval onset whole-body scoliosis in zebrafish. We identified a new mutation in theskolios/kinesin family member 6(kif6) gene, causing neurodevelopmental and ependymal cilia defects in mouse and zebrafish. We also report several recessive alleles of thescospondinanda disintegrin and metalloproteinase with thrombospondin motifs 9(adamts9) genes, which all display defects in spine morphogenesis. Many of the alleles characterized thus far are non-synonymous mutations in known essentialscospondinandadamts9genes. Our results provide evidence of monogenic traits that are critical for normal spine development in zebrafish, that may help to establish new candidate risk loci for spine disorders in humans.
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- 2020
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26. The developmental biology of kinesins
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Mia J. Konjikusic, Ryan S. Gray, and John B. Wallingford
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Central Nervous System ,Cell division ,Organogenesis ,Morphogenesis ,Embryonic Development ,Kinesins ,Mitosis ,Biology ,Motor protein ,03 medical and health sciences ,0302 clinical medicine ,Microtubule ,Animals ,Humans ,Cilia ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,Cilium ,Cell Cycle ,Genetic Diseases, Inborn ,Biological Transport ,Cell Biology ,Phenotype ,Cell biology ,Kinesin ,Developmental biology ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Kinesins are microtubule-based motor proteins that are well known for their key roles in cell biological processes ranging from cell division, to intracellular transport of mRNAs, proteins, vesicles, and organelles, and microtubule disassembly. Interestingly, many of the ~45 distinct kinesin genes in vertebrate genomes have also been associated with specific phenotypes in embryonic development. In this review, we highlight the specific developmental roles of kinesins, link these to cellular roles reported in vitro, and highlight remaining gaps in our understanding of how this large and important family of proteins contributes to the development and morphogenesis of animals.
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- 2020
27. Genomic characterization of the adolescent idiopathic scoliosis associated transcriptome and regulome
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Carol Wise, Nadja Makki, Zhaoyang Liu, Anas M. Khanshour, Zhuoxi Wu, Walter L. Eckalbar, Jonathan J. Rios, Aki Ushiki, Ryan S. Gray, Nadav Ahituv, and Jingjing Zhao
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0303 health sciences ,education.field_of_study ,030305 genetics & heredity ,Population ,Genome-wide association study ,Regulome ,Single-nucleotide polymorphism ,Computational biology ,Biology ,3. Good health ,Transcriptome ,03 medical and health sciences ,Enhancer ,education ,Gene ,030304 developmental biology ,Genetic association - Abstract
Adolescent idiopathic scoliosis (AIS), a sideways curvature of the spine, is the most common pediatric musculoskeletal disorder, affecting ∼3% of the population worldwide. However, its genetic bases and tissues of origin remain largely unknown. Several genome-wide association studies (GWAS) have implicated nucleotide variants in noncoding sequences that control genes with important roles in cartilage, muscle, bone, connective tissue and intervertebral discs (IVDs) as drivers of AIS susceptibility. Here, we set out to define the expression of AIS-associated genes and active regulatory elements by performing RNA-seq and ChIP-seq against H3K27ac in these tissues in mouse and human. Our study highlights genetic pathways involving AIS-associated loci that regulate chondrogenesis, IVD development and connective tissue maintenance and homeostasis. In addition, we identify thousands of putative AIS-associated regulatory elements which may orchestrate tissue-specific expression in musculoskeletal tissues of the spine. Quantification of enhancer activity of several candidate regulatory elements from our study identifies three functional enhancers carrying AIS-associated GWAS SNPs at theADGRG6andBNC2loci. Our findings provide a novel genome-wide catalog of AIS-relevant genes and regulatory elements and aid in the identification of novel targets for AIS causality and treatment.
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- 2020
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28. A missense variant in SLC39A8 is associated with severe idiopathic scoliosis
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Lilian Antunes, Jimann Shin, Brooke Sadler, Gabe Haller, Supak Jenkitkasemwong, Mitchell D. Knutson, Zachary Upshaw, Kevin McCall, Erin E. Baschal, Matthew B. Dobbs, Christina A. Gurnett, Cathleen L. Raggio, Ryan S. Gray, Matthew B. Harms, Nancy H. Miller, Philip F. Giampietro, Jose A. Morcuende, Carol Wise, Momchil Nikolov, Lila Solnica-Krezel, Carlos Cruchaga, and Julia Whittle
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0301 basic medicine ,medicine.medical_specialty ,Movement ,Science ,Mutation, Missense ,General Physics and Astronomy ,Scoliosis ,Polymorphism, Single Nucleotide ,Gastroenterology ,Bone and Bones ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Polymorphism (computer science) ,Internal medicine ,Genetic variation ,medicine ,Animals ,Humans ,SNP ,Missense mutation ,Exome ,Genetic Predisposition to Disease ,lcsh:Science ,Cation Transport Proteins ,Genetic Association Studies ,Zebrafish ,Ions ,Multidisciplinary ,business.industry ,General Chemistry ,medicine.disease ,Minor allele frequency ,HEK293 Cells ,030104 developmental biology ,Blood pressure ,Cohort ,lcsh:Q ,business - Abstract
Genetic factors predictive of severe adolescent idiopathic scoliosis (AIS) are largely unknown. To identify genetic variation associated with severe AIS, we performed an exome-wide association study of 457 severe AIS cases and 987 controls. We find a missense SNP in SLC39A8 (p.Ala391Thr, rs13107325) associated with severe AIS (P = 1.60 × 10−7, OR = 2.01, CI = 1.54–2.62). This pleiotropic SNP was previously associated with BMI, blood pressure, cholesterol, and blood manganese level. We replicate the association in a second cohort (841 cases and 1095 controls) resulting in a combined P = 7.02 × 10−14, OR = 1.94, CI = 1.63–2.34. Clinically, the minor allele of rs13107325 is associated with greater spinal curvature, decreased height, increased BMI and lower plasma manganese in our AIS cohort. Functional studies demonstrate reduced manganese influx mediated by the SLC39A8 p.Ala391Thr variant and vertebral abnormalities, impaired growth, and decreased motor activity in slc39a8 mutant zebrafish. Our results suggest the possibility that scoliosis may be amenable to dietary intervention., The majority of scoliosis is considered idiopathic with onset in adolescence (AIS) and has a genetic contribution. Here, the authors perform an exome wide association study of data from 457 severe AIS cases and 987 controls, and find a missense variant in SLC39A8 is associated with AIS.
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- 2018
29. Biomechanical interplay between anisotropic re-organization of cells and the surrounding matrix underlies transition to invasive cancer spread
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Jayhyun Seo, Andrew J. Ewald, Andre Levchenko, Chia Yi Su, Moon Kyu Kwak, JinSeok Park, Deok Ho Kim, Ryan S. Gray, Kshitiz, and Steven S. An
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0301 basic medicine ,Fiber orientation ,lcsh:Medicine ,Biology ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,Cell Movement ,Cell Line, Tumor ,medicine ,Humans ,Neoplasm Invasiveness ,Neoplasm Metastasis ,Cytoskeleton ,lcsh:Science ,Melanoma ,Multidisciplinary ,Invasive carcinoma ,lcsh:R ,medicine.disease ,Primary tumor ,Cell biology ,Biomechanical Phenomena ,Extracellular Matrix ,030104 developmental biology ,Cell culture ,030220 oncology & carcinogenesis ,Cancer cell ,Anisotropy ,lcsh:Q ,Collagen - Abstract
The root cause of cancer mortality and morbidity is the metastatic spread of the primary tumor, but underlying mechanisms remain elusive. Here we investigate biomechanical interactions that may accompany invasive spread of melanoma cells. We find that metastatic cells can exert considerable traction forces and modify local collagen organization within a 3D matrix. When this re-organization is mimicked using a nano-fabricated model of aligned extracellular matrix fibers, metastatic cells, including less invasive melanoma cells, were in turn induced to align, elongate and migrate, guided by the local ridge orientations. Strikingly, we found that this aligned migration of melanoma cells was accompanied by long-range regulation of cytoskeletal remodeling that show anisotropic stiffening in the direction of fiber orientation suggestive of a positive feedback between ECM fiber alignment and forces exerted by cancer cells. Taken together, our findings suggest that the invasive spread of cancer cells can be defined by complex interplay with the surrounding matrix, during which they both modify the matrix and use the matrix alignment as a persistent migration cue, leading to more extensive and rapid invasive spread.
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- 2018
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30. Summary of the first inaugural joint meeting of the International Consortium for scoliosis genetics and the International Consortium for vertebral anomalies and scoliosis, March 16-18, 2017, Dallas, Texas
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Sally L. Dunwoodie, Nancy Hadley-Miller, Kenneth M.C. Cheung, Ryan S. Gray, Carol Wise, Christina A. Gurnett, Philip F. Giampietro, Peter D. Turnpenny, Olivier Pourquié, Kenro Kusumi, Cathy L. Raggio, Shiro Ikegawa, and Benjamin A. Alman
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0301 basic medicine ,Genetics ,business.industry ,Idiopathic scoliosis ,Scoliosis ,medicine.disease ,Vertebral anomalies ,Article ,03 medical and health sciences ,030104 developmental biology ,Single entity ,Spine deformity ,Medicine ,business ,Genetics (clinical) ,Congenital scoliosis - Abstract
Scoliosis represents the most common musculoskeletal disorder in children and affects approximately 3% of the world population. Scoliosis is separated into two major phenotypic classifications: congenital and idiopathic. Idiopathic scoliosis is defined as a curvature of the spine of 10° or greater visualized on plane radiograph and does not have associated vertebral malformations (VM). “Congenital” scoliosis (CS) due to malformations in vertebrae is frequently associated with other birth defects. Recently, significant advances have been made in understanding the genetic basis of both conditions. There is evidence that both conditions are etiologically related. A 2-day conference entitled “Genomic Approaches to Understanding and Treating Scoliosis” was held at Scottish Rite Hospital for Children in Dallas, Texas, to synergize research in this field. This first combined, multidisciplinary conference featured international scoliosis researchers in basic and clinical sciences. A major outcome of the conference advancing scoliosis research was the proposal and subsequent vote in favor of merging the International Consortium for Vertebral Anomalies and Scoliosis (ICVAS) and International Consortium for Scoliosis Genetics (ICSG) into a single entity called International Consortium for Spinal Genetics, Development, and Disease (ICSGDD). The ICSGDD is proposed to meet annually as a forum to synergize multidisciplinary spine deformity research.
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- 2017
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31. Whole Genome Sequencing-Based Mapping and Candidate Identification of Mutations from Fixed Zebrafish Tissue
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Sarah D. Ackerman, Ryan S. Gray, Breanne L. Harty, Nicholas E. Sanchez, Melanie Holmgren, Thomas O'Reilly-Pol, Stephen L. Johnson, Amy L. Herbert, and Kelly R. Monk
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0301 basic medicine ,Tissue Fixation ,Nonsense mutation ,Mutant ,QH426-470 ,Investigations ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Genetics ,Animals ,mapping ,fixed tissue sequencing ,Molecular Biology ,Gene ,Zebrafish ,Genetics (clinical) ,Whole genome sequencing ,Phenocopy ,whole genome sequencing ,biology ,Chromosome Mapping ,zebrafish ,biology.organism_classification ,genomic DNA ,030104 developmental biology ,genetic screen ,Mutation ,linkage ,Genetic screen - Abstract
As forward genetic screens in zebrafish become more common, the number of mutants that cannot be identified by gross morphology or through transgenic approaches, such as many nervous system defects, has also increased. Screening for these difficult-to-visualize phenotypes demands techniques such as whole-mount in situ hybridization (WISH) or antibody staining, which require tissue fixation. To date, fixed tissue has not been amenable for generating libraries for whole genome sequencing (WGS). Here, we describe a method for using genomic DNA from fixed tissue and a bioinformatics suite for WGS-based mapping of zebrafish mutants. We tested our protocol using two known zebrafish mutant alleles, gpr126st49 and egr2bfh227, both of which cause myelin defects. As further proof of concept we mapped a novel mutation, stl64, identified in a zebrafish WISH screen for myelination defects. We linked stl64 to chromosome 1 and identified a candidate nonsense mutation in the F-box and WD repeat domain containing 7 (fbxw7) gene. Importantly, stl64 mutants phenocopy previously described fbxw7vu56 mutants, and knockdown of fbxw7 in wild-type animals produced similar defects, demonstrating that stl64 disrupts fbxw7. Together, these data show that our mapping protocol can map and identify causative lesions in mutant screens that require tissue fixation for phenotypic analysis.
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- 2017
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32. The Reissner Fiber is Highly Dynamic in vivo and Controls Morphogenesis of the Spine
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Ryoko Minowa, Mia J. Konjikusic, Adrian T. Monstad-Rios, Ronald Y. Kwon, Benjamin R. Troutwine, Lilianna Solnica-Krezel, Paul Gontarz, Diane S. Sepich, and Ryan S. Gray
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Nervous system ,0303 health sciences ,050208 finance ,biology ,05 social sciences ,Mutant ,Embryogenesis ,Central nervous system ,Morphogenesis ,Spinal cord ,biology.organism_classification ,Cell biology ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Cerebrospinal fluid ,0502 economics and business ,medicine ,sense organs ,050207 economics ,Zebrafish ,030217 neurology & neurosurgery ,Homeostasis ,030304 developmental biology - Abstract
SummarySpine morphogenesis requires the integration of multiple musculoskeletal tissues with the nervous system. Cerebrospinal fluid (CSF) physiology is important for development and homeostasis of the central nervous system and its disruption has been linked to scoliosis in zebrafish [1, 2]. Suspended in the CSF is an enigmatic glycoprotein thread called the Reissner fiber, which is secreted from the subcomissural organ (SCO) in the brain and extends caudally through the central canal to where it terminates at the base of the spinal cord. In zebrafish,scospondinnull mutants are unable to assemble the Reissner fiber and fail to extend a straight body axis during embryonic development [3]. Here, we describe zebrafish hypomorphic missense alleles, which assemble the Reissner fiber and straighten the body axis during early embryonic development, yet progressively lose the fiber, concomitant with the emergence of body curvature, alterations in neuronal gene expression, and scoliosis in adults. Using an endogenously taggedscospondin-GFPzebrafish knock-in line, we directly visualized Reissner fiber dynamics during the normal development and during the progression of scoliosis, and demonstrate that the Reissner fiber is critical for the morphogenesis of the spine. Our study establishes a framework for future investigations of mechanistic roles of the Reissner fiber including its dynamic properties, molecular interactions, and how these processes are involved in the regulation of spine morphogenesis and scoliosis.HighlightsHypomorphic mutations in zebrafishscospondinresult in progressive scoliosisThe disassembly of the Reissner fiber inscospondinhypomorphic mutants results in the strong upregulation of neuronal receptors and synaptic transport componentsAn endogenous fluorescent knock-in allele ofscospondinreveals dynamic properties of the Reissner fiber during zebrafish developmentLoss of the Reissner fiber during larval development is a common feature of zebrafish scoliosis models
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- 2019
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33. The expanding functional roles and signaling mechanisms of adhesion G protein-coupled receptors
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Simone Prömel, Swati Srivastava, Nariman Balenga, Demet Araç, Hee Yong Kim, Nicole Scholz, Uwe Wolfrum, Yuri A. Ushkaryov, Rory K. Morgan, Randy A. Hall, Mario Vallon, James P. Bridges, Deva Krupakar Kusuluri, Gabriela Aust, Benoit Vanhollebeke, Ryan S. Gray, Antony A. Boucard, Xianhua Piao, Kelly R. Monk, Katherine Leon, Amit Mogha, Erwin G. Van Meir, Maike D. Glitsch, Cheng-Chih Hsiao, Kevin M. Wright, Ines Liebscher, Garret R. Anderson, Alexander Bernd Knierim, Caroline J. Formstone, Felix B. Engel, Kimberley F. Tolias, Doreen Thor, and Experimental Immunology
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0301 basic medicine ,G protein ,General Science & Technology ,Article ,General Biochemistry, Genetics and Molecular Biology ,Receptors, G-Protein-Coupled ,immunology ,03 medical and health sciences ,G-Protein-Coupled ,0302 clinical medicine ,History and Philosophy of Science ,Receptors ,Extracellular ,Animals ,Humans ,cancer ,structural biology ,mechanosensation ,Receptor ,development ,G protein-coupled receptor ,Chemistry ,General Neuroscience ,neurobiology ,Sciences bio-médicales et agricoles ,Transmembrane protein ,Cell biology ,030104 developmental biology ,Structural biology ,Generic health relevance ,Signal transduction ,adhesion G protein-coupled receptor ,030217 neurology & neurosurgery ,Intracellular ,signal transduction ,Signal Transduction - Abstract
The adhesion class of G protein-coupled receptors (GPCRs) is the second largest family of GPCRs (33 members in humans). Adhesion GPCRs (aGPCRs) are defined by a large extracellular N-terminal region that is linked to a C-terminal seven transmembrane (7TM) domain via a GPCR-autoproteolysis inducing (GAIN) domain containing a GPCR proteolytic site (GPS). Most aGPCRs undergo autoproteolysis at the GPS motif, but the cleaved fragments stay closely associated, with the N-terminal fragment (NTF) bound to the 7TM of the C-terminal fragment (CTF). The NTFs of most aGPCRs contain domains known to be involved in cell-cell adhesion, while the CTFs are involved in classical G protein signaling, as well as other intracellular signaling. In this workshop report, we review the most recent findings on the biology, signaling mechanisms, and physiological functions of aGPCRs., info:eu-repo/semantics/published
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- 2019
34. The cartilage matrisome in adolescent idiopathic scoliosis
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Ryan S. Gray, Diane S. Sepich, Aki Ushiki, Lila Solnica-Krezel, Nadja Makki, Yared H. Kidane, Christina A. Gurnett, Nadav Ahituv, Jonathan J. Rios, Anas M. Khanshour, and Carol Wise
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0301 basic medicine ,Pediatric Research Initiative ,Histology ,Physiology ,Endocrinology, Diabetes and Metabolism ,Clinical Sciences ,Genome-wide association study ,Scoliosis ,Review Article ,Pathogenesis ,Bioinformatics ,lcsh:Physiology ,03 medical and health sciences ,0302 clinical medicine ,Genetics ,Deformity ,2.1 Biological and endogenous factors ,Medicine ,Aetiology ,lcsh:QH301-705.5 ,Pediatric ,lcsh:QP1-981 ,business.industry ,Cartilage ,Human Genome ,Intervertebral disc ,medicine.disease ,Spinal column ,Genetic architecture ,Bone quality and biomechanics ,Developmental disorder ,030104 developmental biology ,medicine.anatomical_structure ,lcsh:Biology (General) ,Musculoskeletal ,medicine.symptom ,business ,030217 neurology & neurosurgery - Abstract
The human spinal column is a dynamic, segmented, bony, and cartilaginous structure that protects the neurologic system and simultaneously provides balance and flexibility. Children with developmental disorders that affect the patterning or shape of the spine can be at risk of neurologic and other physiologic dysfunctions. The most common developmental disorder of the spine is scoliosis, a lateral deformity in the shape of the spinal column. Scoliosis may be part of the clinical spectrum that is observed in many developmental disorders, but typically presents as an isolated symptom in otherwise healthy adolescent children. Adolescent idiopathic scoliosis (AIS) has defied understanding in part due to its genetic complexity. Breakthroughs have come from recent genome-wide association studies (GWAS) and next generation sequencing (NGS) of human AIS cohorts, as well as investigations of animal models. These studies have identified genetic associations with determinants of cartilage biogenesis and development of the intervertebral disc (IVD). Current evidence suggests that a fraction of AIS cases may arise from variation in factors involved in the structural integrity and homeostasis of the cartilaginous extracellular matrix (ECM). Here, we review the development of the spine and spinal cartilages, the composition of the cartilage ECM, the so-called “matrisome” and its functions, and the players involved in the genetic architecture of AIS. We also propose a molecular model by which the cartilage matrisome of the IVD contributes to AIS susceptibility.
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- 2019
35. Regulation of terminal hypertrophic chondrocyte differentiation in Prmt5 mutant mice modeling infantile idiopathic scoliosis
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Ryan S. Gray, Steven A. Vokes, Janani Ramachandran, and Zhaoyang Liu
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Protein-Arginine N-Methyltransferases ,Pathology ,Medicine (miscellaneous) ,lcsh:Medicine ,Core Binding Factor Alpha 1 Subunit ,Bone Morphogenetic Protein 4 ,Mice ,0302 clinical medicine ,Immunology and Microbiology (miscellaneous) ,Osteogenesis ,Homeostasis ,Promoter Regions, Genetic ,0303 health sciences ,Stem Cells ,Protein arginine methyltransferase 5 ,Gene Expression Regulation, Developmental ,Cell Differentiation ,Phenotype ,Pathophysiology ,RUNX2 ,medicine.anatomical_structure ,endochondral ossification ,Scoliosis ,Chondrogenesis ,Research Article ,lcsh:RB1-214 ,medicine.medical_specialty ,Neuroscience (miscellaneous) ,Biology ,General Biochemistry, Genetics and Molecular Biology ,prmt5 ,chondrocyte terminal differentiation ,03 medical and health sciences ,Chondrocytes ,Matrix Metalloproteinase 13 ,medicine ,lcsh:Pathology ,Animals ,Hedgehog Proteins ,Progenitor cell ,Endochondral ossification ,Alleles ,Crosses, Genetic ,Cell Proliferation ,030304 developmental biology ,business.industry ,lcsh:R ,Intervertebral disc ,infantile scoliosis ,Cartilage ,Mutation ,Age of onset ,business ,Gene Deletion ,030217 neurology & neurosurgery - Abstract
Idiopathic scoliosis (IS) is the most common type of musculoskeletal defect affecting children worldwide, and is classified by age of onset, location and degree of spine curvature. Although rare, IS with onset during infancy is the more severe and rapidly progressive form of the disease, associated with increased mortality due to significant respiratory compromise. The pathophysiology of IS, in particular for infantile IS, remains elusive. Here, we demonstrate the role of PRMT5 in the infantile IS phenotype in mouse. Conditional genetic ablation of PRMT5 in osteochondral progenitors results in impaired terminal hypertrophic chondrocyte differentiation and asymmetric defects of endochondral bone formation in the perinatal spine. Analysis of these several markers of endochondral ossification revealed increased type X collagen (COLX) and Ihh expression, coupled with a dramatic reduction in Mmp13 and RUNX2 expression, in the vertebral growth plate and in regions of the intervertebral disc in the Prmt5 conditional mutant mice. We also demonstrate that PRMT5 has a continuous role in the intervertebral disc and vertebral growth plate in adult mice. Altogether, our results establish PRMT5 as a critical promoter of terminal hypertrophic chondrocyte differentiation and endochondral bone formation during spine development and homeostasis. This article has an associated First Person interview with the first author of the paper., Summary: Loss of Prmt5 in osteochondral progenitors impairs terminal hypertrophic chondrocyte differentiation, leading to defects in endochondral bone formation and models infantile idiopathic scoliosis in mouse.
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- 2019
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36. The Reissner Fiber Is Highly Dynamic In Vivo and Controls Morphogenesis of the Spine
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Paul Gontarz, Mia J. Konjikusic, Benjamin R. Troutwine, Diane S. Sepich, Ryan S. Gray, Ryoko Minowa, Adrian T. Monstad-Rios, Ronald Y. Kwon, and Lilianna Solnica-Krezel
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0301 basic medicine ,Embryogenesis ,Central nervous system ,Morphogenesis ,Biology ,Spinal cord ,biology.organism_classification ,Embryonic stem cell ,General Biochemistry, Genetics and Molecular Biology ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,medicine ,sense organs ,General Agricultural and Biological Sciences ,Zebrafish ,030217 neurology & neurosurgery ,Subcommissural organ ,Floor plate - Abstract
Summary Cerebrospinal fluid (CSF) physiology is important for the development and homeostasis of the central nervous system, and its disruption has been linked to scoliosis in zebrafish [ 1 , 2 ]. Suspended in the CSF is an extracellular structure called the Reissner fiber, which extends from the brain through the central canal of the spinal cord. Zebrafish scospondin-null mutants are unable to assemble a Reissner fiber and fail to form a straight body axis during embryonic development [ 3 ]. Here, we describe hypomorphic missense mutations of scospondin, which allow Reissner fiber assembly and extension of a straight axis. However, during larval development, these mutants display progressive Reissner fiber disassembly, which is concomitant with the emergence of axial curvatures and scoliosis in adult animals. Using a scospondin-GFP knockin zebrafish line, we demonstrate several dynamic properties of the Reissner fiber in vivo, including embryonic fiber assembly, the continuous rostral to caudal movement of the fiber within the brain and central canal, and subcommissural organ (SCO)-spondin-GFP protein secretion from the floor plate to merge with the fiber. Finally, we show that disassembly of the Reissner fiber is also associated with the progression of axial curvatures in distinct scoliosis mutant zebrafish models. Together, these data demonstrate a critical role for the Reissner fiber for the maintenance of a straight body axis and spine morphogenesis in adult zebrafish. Our study establishes a framework for future investigations to address the cellular effectors responsible for Reissner-fiber-dependent regulation of axial morphology. Video Abstract Download : Download video (26MB)
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- 2020
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37. Mutations in Kinesin family member 6 reveal specific role in ependymal cell ciliogenesis and human neurological development
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Kanya Suphapeetiporn, Vorasuk Shotelersuk, Curtis W. Boswell, Elle C. Roberson, Patra Yeetong, Christina A. Gurnett, John B. Wallingford, Ryan S. Gray, Mia J. Konjikusic, Brian Ciruna, Rungnapa Ittiwut, and Chanjae Lee
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Male ,0301 basic medicine ,Axoneme ,Cancer Research ,Physiology ,Gene Expression ,Kinesins ,Artificial Gene Amplification and Extension ,QH426-470 ,Nervous System ,Polymerase Chain Reaction ,Biochemistry ,Animals, Genetically Modified ,Consanguinity ,Mice ,Xenopus laevis ,Medicine and Health Sciences ,Basal body ,Tissue Distribution ,Child ,Frameshift Mutation ,Zebrafish ,Genetics (clinical) ,Sequence Deletion ,Cerebrospinal Fluid ,Cilium ,Homozygote ,Microtubule Motors ,Eukaryota ,Animal Models ,Pedigree ,Body Fluids ,Cell biology ,Experimental Organism Systems ,Neurology ,Osteichthyes ,Models, Animal ,Vertebrates ,Kinesin ,Female ,Cellular Structures and Organelles ,Anatomy ,Hydrocephalus ,Research Article ,Genetically modified mouse ,Ependymal Cell ,Mice, Transgenic ,Mouse Models ,Biology ,Research and Analysis Methods ,03 medical and health sciences ,Model Organisms ,Molecular Motors ,Ependyma ,Intellectual Disability ,Ciliogenesis ,Genetics ,Animals ,Humans ,Amino Acid Sequence ,Cilia ,Molecular Biology Techniques ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Base Sequence ,Organisms ,Biology and Life Sciences ,Proteins ,Cell Biology ,biology.organism_classification ,Cytoskeletal Proteins ,Fish ,030104 developmental biology ,Neurodevelopmental Disorders ,Mutation ,Animal Studies - Abstract
Cerebrospinal fluid flow is crucial for neurodevelopment and homeostasis of the ventricular system of the brain, with localized flow being established by the polarized beating of the ependymal cell (EC) cilia. Here, we report a homozygous one base-pair deletion, c.1193delT (p.Leu398Glnfs*2), in the Kinesin Family Member 6 (KIF6) gene in a child displaying neurodevelopmental defects and intellectual disability. To test the pathogenicity of this novel human KIF6 mutation we engineered an analogous C-terminal truncating mutation in mouse. These mutant mice display severe, postnatal-onset hydrocephalus. We generated a Kif6-LacZ transgenic mouse strain and report expression specifically and uniquely within the ependymal cells (ECs) of the brain, without labeling other multiciliated mouse tissues. Analysis of Kif6 mutant mice with scanning electron microscopy (SEM) and immunofluorescence (IF) revealed specific defects in the formation of EC cilia, without obvious effect of cilia of other multiciliated tissues. Dilation of the ventricular system and defects in the formation of EC cilia were also observed in adult kif6 mutant zebrafish. Finally, we report Kif6-GFP localization at the axoneme and basal bodies of multi-ciliated cells (MCCs) of the mucociliary Xenopus epidermis. Overall, this work describes the first clinically-defined KIF6 homozygous null mutation in human and defines KIF6 as a conserved mediator of neurological development with a specific role for EC ciliogenesis in vertebrates., Author summary Cerebrospinal fluid flow is crucial for neurodevelopment and homeostasis of the ventricular system of the brain. Localized flows of cerebrospinal fluid throughout the ventricular system of the brain are established from the polarized beating of the ependymal cell (EC) cilia. Here, we identified a homozygous truncating mutation in KIF6 in a child displaying neurodevelopmental defects and intellectual disability. To test the function of KIF6 in vivo, we engineered mutations of Kif6 in mouse. These Kif6 mutant mice display severe hydrocephalus, coupled with defects in the formation of EC cilia. Similarly, we observed hydrocephalus and a reduction in EC cilia in kif6 mutant zebrafish. Overall, this work describes the first clinically-defined KIF6 mutation in human, while our animal studies demonstrate the pathogenicity of mutations in KIF6 and establish KIF6 as a conserved mediator of ciliogenesis in ECs in vertebrates.
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- 2018
38. Mutations in Kinesin Family Member 6 Reveal Specific Role in Ependymal Cell Function and Human Neuro-Cranial Development
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Patra Yeetong, Christina A. Gurnett, John B. Wallingford, Shotelersuk, Rungnapa Ittiwut, Ryan S. Gray, Mia J. Konjikusic, and Kanya Suphapeetiporn
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Genetically modified mouse ,Mutation ,Ependymal Cell ,Cilium ,Mutant ,medicine ,Kinesin ,Biology ,medicine.disease_cause ,biology.organism_classification ,Zebrafish ,Null allele ,Cell biology - Abstract
Cerebrospinal fluid flow is crucial for neurodevelopment and homeostasis of the ventricular system of the brain, with localized flow being established by the polarized beating of the ependymal cell (EC) cilia. Here, we report a homozygous one base-pair deletion, c.1193delT (p.Leu398Glnfs*2), in the Kinesin Family Member 6 (KIF6) gene in a child displaying neurocranial defects and intellectual disability. To test the pathogenicity of this novel human KIF6 mutation we engineered an analogous C-terminal truncating mutation in mouse. These mutant mice display severe, postnatal-onset hydrocephalus. We generated a Kif6-LacZ transgenic mouse strain and report expression specifically and uniquely within the ependymal cell (EC) layer of the brain, without labeling other multiciliated mouse tissues. Analysis of Kif6 mutant mice with scanning electron microscopy (SEM) and immunofluorescence (IF) revealed a reduction in EC cilia, without effect on other multiciliated tissues. Consistent with our findings in mice, defects of the ventricular system and EC cilia were observed in kif6 mutant zebrafish. Overall, this work describes the first clinically-defined KIF6 homozygous null mutation in human and defines KIF6 as a conserved mediator of neuro-cranial morphogenesis with a specific role in the maintenance of EC cilia in vertebrates.AUTHOR SUMMARYCerebrospinal fluid flow is crucial for neurodevelopment and homeostasis of the ventricular system of the brain. Localized flows of cerebrospinal fluid throughout the ventricular system of the brain are established from the polarized beating of the ependymal cell (EC) cilia. Here, we identified a homozygous truncating mutation in KIF6 in a child displaying neuro-cranial defects and intellectual disability. To test the function of KIF6 in vivo, we engineered mutations of Kif6 in mouse. These Kif6 mutant mice display severe hydrocephalus, coupled with a loss of EC cilia. Similarly, we observed hydrocephalus and a reduction in EC cilia in kif6 mutant zebrafish. Overall, this work describes the first clinically-defined KIF6 mutation in human, while our animal studies demonstrate the pathogenicity of mutations in KIF6 and establish KIF6 as a conserved mediator of neuro-cranial development and EC cilia maintenance in vertebrates.
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- 2018
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39. Animal Models of Idiopathic Scoliosis
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Ryan S. Gray and Zhaoyang Liu
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0301 basic medicine ,Idiopathic scoliosis ,Scoliosis ,Biology ,medicine.disease ,biology.organism_classification ,Resection ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Genetic model ,medicine ,Postnatal growth ,Neuroscience ,Zebrafish ,030217 neurology & neurosurgery ,Large animal - Abstract
Structural deformity of the spine can present during embryonic development as well as during a range of postnatal growth and maturation in humans. The most common spine disorders observed in human are classified as idiopathic scoliosis (IS), with the majority of these presenting during adolescence. By definition there is a limited understanding of the underlying causes of these idiopathic disorders. Several animal models have been reported to display hallmarks and characteristic traits of IS ranging from pineal gland resection in chicken to surgically induced scoliosis in large animal models to more recent examples of heritable genetic models in mouse and zebrafish. Moreover, recent progress using human genomic studies coupled with genetically tractable models of IS using the mouse and zebrafish has begun to advance a more mechanistic understanding of the genetics and pathogenesis of this condition. In this chapter, we review the range of animal models for IS, highlighting the important findings from each model and addressing caveats for consideration. Studies using relevant animal models have tremendous potential to identify the mechanisms underlying IS and other diseases of the spine and offer an ethical and cost-effective platform for the development of novel therapeutics.
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- 2018
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40. Dynein/dynactin is necessary for anterograde transport of
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Amy L, Herbert, Meng-Meng, Fu, Catherine M, Drerup, Ryan S, Gray, Breanne L, Harty, Sarah D, Ackerman, Thomas, O'Reilly-Pol, Stephen L, Johnson, Alex V, Nechiporuk, Ben A, Barres, and Kelly R, Monk
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dynein ,Microfilament Proteins ,Dyneins ,myelination ,oligodendrocytes ,Biological Transport ,Myelin Basic Protein ,macromolecular substances ,Dynactin Complex ,Zebrafish Proteins ,Biological Sciences ,Axons ,Animals, Genetically Modified ,Rats, Sprague-Dawley ,Oligodendroglia ,mRNA transport ,PNAS Plus ,dynactin ,Larva ,Animals ,RNA, Messenger ,Cells, Cultured ,Zebrafish ,Cell Proliferation ,Neuroscience - Abstract
Significance Oligodendrocytes in the brain insulate neuronal axons in layers of fatty myelin to facilitate fast electrical signaling. Myelin basic protein (MBP), an important myelin component, is transported as mRNA away from the cell body before being translated into protein. In zebrafish, the anterograde motor kinesin transports mbp mRNA away from the cell body. We now identify myelination defects in zebrafish caused by a mutation in the retrograde motor complex dynein/dynactin, which normally transports cargos back toward the cell body. However, this mutant displays defects in anterograde mbp mRNA transport. We confirm in mammalian oligodendrocyte cultures that drug inhibition of dynein arrests transport in both directions and decreases MBP protein levels. Thus, dynein/dynactin is paradoxically required for anterograde mbp mRNA transport., Oligodendrocytes in the central nervous system produce myelin, a lipid-rich, multilamellar sheath that surrounds axons and promotes the rapid propagation of action potentials. A critical component of myelin is myelin basic protein (MBP), expression of which requires anterograde mRNA transport followed by local translation at the developing myelin sheath. Although the anterograde motor kinesin KIF1B is involved in mbp mRNA transport in zebrafish, it is not entirely clear how mbp transport is regulated. From a forward genetic screen for myelination defects in zebrafish, we identified a mutation in actr10, which encodes the Arp11 subunit of dynactin, a critical activator of the retrograde motor dynein. Both the actr10 mutation and pharmacological dynein inhibition in zebrafish result in failure to properly distribute mbp mRNA in oligodendrocytes, indicating a paradoxical role for the retrograde dynein/dynactin complex in anterograde mbp mRNA transport. To address the molecular mechanism underlying this observation, we biochemically isolated reporter-tagged Mbp mRNA granules from primary cultured mammalian oligodendrocytes to show that they indeed associate with the retrograde motor complex. Next, we used live-cell imaging to show that acute pharmacological dynein inhibition quickly arrests Mbp mRNA transport in both directions. Chronic pharmacological dynein inhibition also abrogates Mbp mRNA distribution and dramatically decreases MBP protein levels. Thus, these cell culture and whole animal studies demonstrate a role for the retrograde dynein/dynactin motor complex in anterograde mbp mRNA transport and myelination in vivo.
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- 2017
41. Dynein/dynactin is necessary for anterograde transport of Mbp mRNA in oligodendrocytes and for myelination in vivo
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Sarah D. Ackerman, Breanne L. Harty, Ben A. Barres, Alex Nechiporuk, Thomas O'Reilly-Pol, Catherine M. Drerup, Ryan S. Gray, Stephen L. Johnson, Amy L. Herbert, Kelly R. Monk, and Meng-meng Fu
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0301 basic medicine ,Multidisciplinary ,Dynein ,macromolecular substances ,Biology ,biology.organism_classification ,Molecular biology ,Myelin basic protein ,Cell biology ,03 medical and health sciences ,Myelin ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Axoplasmic transport ,medicine ,Dynactin ,biology.protein ,MRNA transport ,Kinesin ,Zebrafish ,030217 neurology & neurosurgery - Abstract
Oligodendrocytes in the central nervous system produce myelin, a lipid-rich, multilamellar sheath that surrounds axons and promotes the rapid propagation of action potentials. A critical component of myelin is myelin basic protein (MBP), expression of which requires anterograde mRNA transport followed by local translation at the developing myelin sheath. Although the anterograde motor kinesin KIF1B is involved in mbp mRNA transport in zebrafish, it is not entirely clear how mbp transport is regulated. From a forward genetic screen for myelination defects in zebrafish, we identified a mutation in actr10, which encodes the Arp11 subunit of dynactin, a critical activator of the retrograde motor dynein. Both the actr10 mutation and pharmacological dynein inhibition in zebrafish result in failure to properly distribute mbp mRNA in oligodendrocytes, indicating a paradoxical role for the retrograde dynein/dynactin complex in anterograde mbp mRNA transport. To address the molecular mechanism underlying this observation, we biochemically isolated reporter-tagged Mbp mRNA granules from primary cultured mammalian oligodendrocytes to show that they indeed associate with the retrograde motor complex. Next, we used live-cell imaging to show that acute pharmacological dynein inhibition quickly arrests Mbp mRNA transport in both directions. Chronic pharmacological dynein inhibition also abrogates Mbp mRNA distribution and dramatically decreases MBP protein levels. Thus, these cell culture and whole animal studies demonstrate a role for the retrograde dynein/dynactin motor complex in anterograde mbp mRNA transport and myelination in vivo.
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- 2017
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42. Kinesin family member 6 (kif6) is necessary for spine development in zebrafish
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Jonathan D. Gitlin, Ryan S. Gray, David M. Alvarado, Lydia Burgert, Matthew I. Goldsmith, Christina A. Gurnett, John M. Gansner, and Jillian G. Buchan
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Genetics ,Transcription activator-like effector nuclease ,Candidate gene ,biology ,Nonsense mutation ,Scoliosis ,medicine.disease ,biology.organism_classification ,Compound heterozygosity ,Frameshift mutation ,medicine ,Kinesin ,Zebrafish ,Developmental Biology - Abstract
Background: Idiopathic scoliosis is a form of spinal deformity that affects 2–3% of children and results in curvature of the spine without structural defects of the vertebral units. The pathogenesis of idiopathic scoliosis remains poorly understood, in part due to the lack of a relevant animal model. Results: We performed a forward mutagenesis screen in zebrafish to identify new models for idiopathic scoliosis. We isolated a recessive zebrafish mutant, called skolios, which develops isolated spinal curvature that arises independent of vertebral malformations. Using meiotic mapping and whole genome sequencing, we identified a nonsense mutation in kinesin family member 6 (kif6 gw326 ) unique to skolios mutants. Three additional kif6 frameshift alleles (gw327, gw328, gw329) were generated with transcription activator-like effector nucleases (TALENs). Zebrafish homozygous or compound heterozygous for kif6 frameshift mutations developed a scoliosis phenotype indistinguishable from skolios mutants, confirming that skolios is caused by the loss of kif6. Although kif6 may play a role in cilia, no evidence for cilia dysfunction was seen in kif6 gw326 mutants. Conclusions: Overall, these findings demonstrate a novel role for kif6 in spinal development and identify a new candidate gene for human idiopathic scoliosis. Developmental Dynamics 243:1646–1657, 2014. V C 2014 Wiley Periodicals, Inc.
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- 2014
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43. Dysregulation of STAT3 signaling is associated with endplate-oriented herniations of the intervertebral disc in Adgrg6 mutant mice
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Nadja Makki, Jingjing Zhao, Nadav Ahituv, Simon Y. Tang, Garrett W. D. Easson, Matthew J. Hilton, Ryan S. Gray, Zhaoyang Liu, and Mariani, Francesca V
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Aging ,Cell signaling ,Cancer Research ,Mutant ,Gene Expression ,Intervertebral Disc Degeneration ,QH426-470 ,Signal transduction ,medicine.disease_cause ,Biochemistry ,Stiffness ,Receptors, G-Protein-Coupled ,Mice ,0302 clinical medicine ,Receptors ,Medicine and Health Sciences ,2.1 Biological and endogenous factors ,Growth Plate ,Aetiology ,Intervertebral Disc ,Receptor ,STAT3 ,Genetics (clinical) ,0303 health sciences ,Mutation ,Animal Models ,Cell biology ,STAT signaling ,medicine.anatomical_structure ,Experimental Organism Systems ,Connective Tissue ,Physical Sciences ,Disease Progression ,Anatomy ,Intervertebral Disc Displacement ,Signal Transduction ,Biotechnology ,Research Article ,STAT3 Transcription Factor ,Materials Science ,Material Properties ,Mouse Models ,Biology ,Research and Analysis Methods ,G-Protein-Coupled ,03 medical and health sciences ,Model Organisms ,Genetic model ,Genetics ,medicine ,Mechanical Properties ,Animals ,Humans ,Bone ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Animal ,Cartilage ,Biology and Life Sciences ,Proteins ,Intervertebral disc ,Fibrosis ,Disease Models, Animal ,Biological Tissue ,Disease Models ,Animal Studies ,biology.protein ,Collagens ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Degenerative changes of the intervertebral disc (IVD) are a leading cause of disability affecting humans worldwide and has been attributed primarily to trauma and the accumulation of pathology during aging. While genetic defects have also been associated with disc degeneration, the precise mechanisms driving the initiation and progression of disease have remained elusive due to a paucity of genetic animal models. Here, we discuss a novel conditional mouse genetic model of endplate-oriented disc herniations in adult mice. Using conditional mouse genetics, we show increased mechanical stiffness and reveal dysregulation of typical gene expression profiles of the IVD in adhesion G-protein coupled receptor G6 (Adgrg6) mutant mice prior to the onset of endplate-oriented disc herniations in adult mice. We observed increased STAT3 activation prior to IVD defects and go on to demonstrate that treatment of Adgrg6 conditional mutant mice with a small molecule inhibitor of STAT3 activation ameliorates endplate-oriented herniations. These findings establish ADGRG6 and STAT3 as novel regulators of IVD endplate and growth plate integrity in the mouse, and implicate ADGRG6/STAT3 signaling as promising therapeutic targets for endplate-oriented disc degeneration., Author summary Back pain is a leading cause of disability in humans worldwide and one of the most common culprits of these issues are the consequence of degenerative changes of the intervertebral disc. Here, we demonstrate that conditional loss of the Adgrg6 gene in cartilaginous tissues of the spine results in endplate-oriented disc herniations and degenerative changes of the intervertebral disc in mice. We further establish that these obvious degenerative changes of the disc are preceded by substantial alterations in normal gene expression profiles, including upregulation of pro-inflammatory STAT3 signaling, and increased mechanical stiffness of the intervertebral disc. Increased STAT3 activation is a signal observed in other models of degenerative musculoskeletal tissues. As such, we tested whether systemic treatment with a small-molecule STAT3 inhibitor would protect against the formation of endplate-oriented disc herniations in conditional Adgrg6 mutant mice, and report a significant positive improvement of histopathology in our treatment group. Taken together, we demonstrate a novel conditional model of endplate-oriented disc herniation in mouse. We establish ADGRG6 and STAT3 as novel regulators of endplate integrity of the intervertebral disc in mouse and suggest that modulation of ADGRG6/STAT3 signaling could provide robust disease-modifying targets for endplate-oriented disc degeneration in humans.
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- 2019
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44. Dynein/dynactin regulate anterograde Mbp mRNA transport in oligodendrocytes to promote myelination
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Ben A. Barres, Tom O'Reilly-Pol, Meng-meng Fu, Alex Nechiporuk, Amy L. Herbert, Kelly R. Monk, Catherine M. Drerup, Sarah D. Ackerman, Stephen L. Johnson, Breanne L. Harty, and Ryan S. Gray
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Embryology ,Dynein ,Dynactin ,MRNA transport ,Biology ,Developmental Biology ,Cell biology - Published
- 2017
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45. Planar Cell Polarity: Coordinating Morphogenetic Cell Behaviors with Embryonic Polarity
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Ryan S. Gray, Isabelle Roszko, and Lilianna Solnica-Krezel
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Frizzled ,Polarity (physics) ,Mammalian embryology ,Biology ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,0302 clinical medicine ,Cell polarity ,Animals ,Humans ,Cilia ,Molecular Biology ,Body Patterning ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Cilium ,Cell Polarity ,Cell Biology ,Embryo, Mammalian ,Embryonic stem cell ,Frizzled Receptors ,Cell biology ,Dishevelled ,chemistry ,Microtubule-Organizing Center ,030217 neurology & neurosurgery ,Intracellular ,Signal Transduction ,Developmental Biology - Abstract
Planar cell polarization entails establishment of cellular asymmetries within the tissue plane. An evolutionarily conserved planar cell polarity (PCP) signaling system employs intra- and intercellular feedback interactions between its core components, including Frizzled, Van Gogh, Flamingo, Prickle, and Dishevelled, to establish their characteristic asymmetric intracellular distributions and coordinate planar polarity of cell populations. By translating global patterning information into asymmetries of cell membranes and intracellular organelles, PCP signaling coordinates morphogenetic behaviors of individual cells and cell populations with the embryonic polarity. In vertebrates, by polarizing cilia in the node/Kupffer's vesicle, PCP signaling links the anteroposterior to left-right embryonic polarity.
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- 2011
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46. The planar cell polarity effector Fuz is essential for targeted membrane trafficking, ciliogenesis and mouse embryonic development
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Karen J. Liu, Ryan S. Gray, Richard H. Finnell, Greg S. Weiss, Bogdan J. Wlodarczyk, Edward M. Marcotte, Heather L. Szabo-Rogers, Insuk Lee, John B. Wallingford, Philip B. Abitua, and Otis Blanchard
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Models, Molecular ,Neural Tube ,Frizzled ,Embryonic Development ,Biology ,Article ,Epithelium ,Protein Structure, Secondary ,Exocytosis ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Ciliogenesis ,Cell polarity ,Animals ,Abnormalities, Multiple ,Hedgehog Proteins ,Small GTPase ,Cilia ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Effector ,Homozygote ,Intracellular Signaling Peptides and Proteins ,Cell Polarity ,Computational Biology ,Gene Expression Regulation, Developmental ,Cell Biology ,Embryo, Mammalian ,Mice, Mutant Strains ,Hedgehog signaling pathway ,Protein Structure, Tertiary ,Dishevelled ,Cell biology ,Cytoskeletal Proteins ,Protein Transport ,chemistry ,030217 neurology & neurosurgery ,Signal Transduction - Abstract
The planar cell polarity (PCP) signaling pathway is essential for embryonic development because it governs diverse cellular behaviors, and the “core PCP” proteins, such as Dishevelled and Frizzled, have been extensively characterized1–4. By contrast, the “PCP effector” proteins, such as Intu and Fuz, remain largely unstudied5, 6. These proteins are essential for PCP signaling, but they have never been investigated in a mammal and their cell biological activities remain entirely unknown. We report here that Fuz mutant mice display neural tube defects, skeletal dysmorphologies, and Hedgehog signaling defects stemming from disrupted ciliogenesis. Using bioinformatics and imaging of an in vivo mucociliary epithelium, we establish a central role for Fuz in membrane trafficking, showing that Fuz is essential for trafficking of cargo to basal bodies and to the apical tips of cilia. Fuz is also essential for exocytosis in secretory cells. Finally, we identify a novel, Rab-related small GTPase as a Fuz interaction partner that is also essential for ciliogenesis and secretion. These results are significant because they provide novel insights into the mechanisms by which developmental regulatory systems like PCP signaling interface with fundamental cellular systems such as the vesicle trafficking machinery.
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- 2009
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47. Diversification of the expression patterns and developmental functions of the dishevelled gene family during chordate evolution
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Robbie D. Bayly, Seema Agarwala, Ryan S. Gray, Christopher J. Lowe, Stephen A. Green, and John B. Wallingford
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Transcription, Genetic ,Dishevelled Proteins ,Xenopus ,Chordate ,Chick Embryo ,Xenopus Proteins ,Article ,Evolution, Molecular ,Mice ,Xenopus laevis ,Species Specificity ,medicine ,Animals ,Gene family ,Chordata ,In Situ Hybridization ,Phylogeny ,Adaptor Proteins, Signal Transducing ,DNA Primers ,Genetics ,chemistry.chemical_classification ,Regulation of gene expression ,Base Sequence ,biology ,Wnt signaling pathway ,Gene Expression Regulation, Developmental ,Neural crest ,Phosphoproteins ,biology.organism_classification ,Dishevelled ,Cell biology ,Somite ,medicine.anatomical_structure ,Somites ,chemistry ,Neural Crest ,Multigene Family ,Developmental Biology - Abstract
Dishevelled (Dvl) proteins are key transducers of Wnt signaling encoded by members of a multi-gene family in vertebrates. We report here the divergent, tissue-specific expression patterns for all three Dvl genes in Xenopus embryos, which contrast dramatically with their expression patterns in mice. Moreover, we find that the expression patterns of Dvl genes in the chick diverge significantly from those of Xenopus. In addition, in hemichordates, an outgroup to chordates, we find that the one Dvl gene is dynamically expressed in a tissue-specific manner. Using knockdowns, we find that Dvl1 and Dvl2 are required for early neural crest specification and for somite segmentation in Xenopus. Most strikingly, we report a novel role for Dvl3 in the maintenance of gene expression in muscle and in the development of the Xenopus sclerotome. These data demonstrate that the expression patterns and developmental functions of specific Dvl genes have diverged significantly during chordate evolution.
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- 2009
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48. Gpr126/Adgrg6 deletion in cartilage models idiopathic scoliosis and pectus excavatum in mice
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Courtney M. Karner, Ryan S. Gray, Fanxin Long, Lilianna Solnica-Krezel, and Kelly R. Monk
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Pathology ,medicine.medical_specialty ,Sternum ,Scoliosis ,Biology ,Receptors, G-Protein-Coupled ,Pathogenesis ,Mice ,Chondrocytes ,Pectus excavatum ,Fibrosis ,Genetics ,medicine ,Animals ,Humans ,Genetic Predisposition to Disease ,Receptor ,Molecular Biology ,Genetics (clinical) ,Rib cage ,Cartilage ,General Medicine ,Anatomy ,Articles ,medicine.disease ,Spinal column ,Disease Models, Animal ,medicine.anatomical_structure ,Funnel Chest ,Sulfotransferases - Abstract
Adolescent idiopathic scoliosis (AIS) and pectus excavatum (PE) are common pediatric musculoskeletal disorders. Little is known about the tissue of origin for either condition, or about their genetic bases. Common variants near GPR126/ADGRG6 (encoding the adhesion G protein-coupled receptor 126/adhesion G protein-coupled receptor G6, hereafter referred to as GPR126) were recently shown to be associated with AIS in humans. Here, we provide genetic evidence that loss of Gpr126 in osteochondroprogenitor cells alters cartilage biology and spinal column development. Microtomographic and x-ray studies revealed several hallmarks of AIS, including postnatal onset of scoliosis without malformations of vertebral units. The mutants also displayed a dorsal-ward deflection of the sternum akin to human PE. At the cellular level, these defects were accompanied by failure of midline fusion within the developing annulus fibrosis of the intervertebral discs and increased apoptosis of chondrocytes in the ribs and vertebrae. Molecularly, we found that loss of Gpr126 upregulated the expression of Gal3st4, a gene implicated in human PE, encoding Galactose-3-O-sulfotransferase 4. Together, these data uncover Gpr126 as a genetic cause for the pathogenesis of AIS and PE in a mouse model.
- Published
- 2015
49. Loss of col8a1a Function during Zebrafish Embryogenesis Results in Congenital Vertebral Malformations
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Michel Bagnat, Stephen L. Johnson, Ryan S. Gray, Jeffrey R. Smith, Jacek Topczewski, Lilianna Solnica-Krezel, Rodney M. Dale, and Thomas P. Wilm
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animal structures ,Time Factors ,Notochord ,Scoliosis ,Collagen Type VIII ,Article ,Protein-Lysine 6-Oxidase ,03 medical and health sciences ,0302 clinical medicine ,Vertebral fusion ,Microscopy, Electron, Transmission ,Vertebral malformations ,Somitogenesis ,medicine ,Animals ,Molecular Biology ,Zebrafish ,Alleles ,Crosses, Genetic ,In Situ Hybridization ,030304 developmental biology ,0303 health sciences ,Microscopy, Confocal ,Osteoblasts ,biology ,Osteoblast ,Embryogenesis ,fungi ,Gene Expression Regulation, Developmental ,Cell Biology ,Anatomy ,medicine.disease ,biology.organism_classification ,Spine ,Apposition ,Meiosis ,medicine.anatomical_structure ,embryonic structures ,Mutation ,Collagen ,030217 neurology & neurosurgery ,Vertebral column ,Developmental Biology - Abstract
Congenital vertebral malformations (CVM) occur in 1 in 1000 live births and in many cases can causespinal deformities, such as scoliosis, and result in disability and distress of affected individuals. Manysevere forms of the disease, such as spondylocostal dystostosis, are recessive monogenic traits affectingsomitogenesis, however the etiologies of the majority of CVM cases remain undetermined. Here wedemonstrate that morphological defects of the notochord in zebrafish can generate congenital-type spinedefects. We characterize three recessive zebrafish leviathan/col8a1a mutant alleles ( m531 ,vu41 vu105 ) thatdisrupt collagen type VIII alpha1a (col8a1a), and cause folding of the embryonic notochord andconsequently adult vertebral column malformations. Furthermore, we provide evidence that a transientloss of col8a1a function or inhibition of Lysyl oxidases with drugs during embryogenesis was sufficient togenerate vertebral fusions and scoliosis in the adult spine. Using periodic imaging of individual zebrafish,we correlate focal notochord defects of the embryo with vertebral malformations (VM) in the adult.Finally, we show that bends and kinks in the notochord can lead to aberrant apposition of osteoblastsnormally confined to well-segmented areas of the developing vertebral bodies. Our results afford a novelmechanism for the formation of VM, independent of defects of somitogenesis, resulting from aberrantbone deposition at regions of misshapen notochord tissue.& 2013 Elsevier Inc. All rights reserved.
- Published
- 2013
50. ECM microenvironment regulates collective migration and local dissemination in normal and malignant mammary epithelium
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Paul Yaswen, Eliah R. Shamir, Audrey Brenot, Kim-Vy Nguyen-Ngoc, Zena Werb, Ryan S. Gray, Andrew J. Ewald, William C. Hines, and Kevin J. Cheung
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Pathology ,medicine.medical_specialty ,Stromal cell ,Mammary Neoplasms, Animal ,Breast Neoplasms ,Biology ,Laminin 111 ,Extracellular matrix ,Mice ,Cell Movement ,Breast Cancer ,Tumor Microenvironment ,Genetics ,medicine ,Animals ,Humans ,2.1 Biological and endogenous factors ,Neoplasm Invasiveness ,Cancer ,Basement membrane ,Neoplastic ,Tumor microenvironment ,Multidisciplinary ,Animal ,Mammary Neoplasms ,Epithelium ,Cell biology ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,PNAS Plus ,Gene Expression Regulation ,Mammary Epithelium ,Cancer cell ,Female - Abstract
Breast cancer progression involves genetic changes and changes in the extracellular matrix (ECM). To test the importance of the ECM in tumor cell dissemination, we cultured epithelium from primary human breast carcinomas in different ECM gels. We used basement membrane gels to model the normal microenvironment and collagen I to model the stromal ECM. In basement membrane gels, malignant epithelium either was indolent or grew collectively, without protrusions. In collagen I, epithelium from the same tumor invaded with protrusions and disseminated cells. Importantly, collagen I induced a similar initial response of protrusions and dissemination in both normal and malignant mammary epithelium. However, dissemination of normal cells into collagen I was transient and ceased as laminin 111 localized to the basal surface, whereas dissemination of carcinoma cells was sustained throughout culture, and laminin 111 was not detected. Despite the large impact of ECM on migration strategy, transcriptome analysis of our 3D cultures revealed few ECM-dependent changes in RNA expression. However, we observed many differences between normal and malignant epithelium, including reduced expression of cell-adhesion genes in tumors. Therefore, we tested whether deletion of an adhesion gene could induce sustained dissemination of nontransformed cells into collagen I. We found that deletion of P-cadherin was sufficient for sustained dissemination, but exclusively into collagen I. Our data reveal that metastatic tumors preferentially disseminate in specific ECM microenvironments. Furthermore, these data suggest that breaks in the basement membrane could induce invasion and dissemination via the resulting direct contact between cancer cells and collagen I.
- Published
- 2012
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