109 results on '"Rodger F. Henry"'
Search Results
2. Ritonavir Form III: A New Polymorph After 24 Years
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Xin Yao, Rodger F. Henry, and Geoff G.Z. Zhang
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Ritonavir ,Molecular Conformation ,Pharmaceutical Science ,Hydrogen Bonding ,Crystallization - Abstract
Polymorphism occurs widely in pharmaceutical solids, and must be thoroughly studied during product development. Twenty-four years after ritonavir (RTV) Form II materialized, we report a new polymorph, Form III, discovered via melt crystallization. Form III has a unique PXRD pattern, Raman spectrum, lower melting point and heat of fusion, compared to the known polymorphs, Form I and Form II. It is the least stable form, monotropically, among the three polymorphs. Form III differs from Form I and Form II in molecular conformation and hydrogen bonding motifs in crystal lattice. Nucleation from RTV supercooled liquid is slow, and selected Form III exclusively. The discovery of RTV Form III demonstrates the importance of crystal nucleation studies. Crystallization from supercooled liquids should be incorporated as part of polymorph screening workflow.
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- 2023
3. Inhibiting Sublimation of Thymol by Cocrystallization
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Hui Zu, Rodger F. Henry, Geoff G.Z. Zhang, and Leonard R. MacGillivray
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Pharmaceutical Science ,Hydrogen Bonding ,Crystallization ,Thymol - Abstract
A thymol:4,4'-dipyridyl (2:1) cocrystal (Form I) is reported to suppress thymol sublimation. The cocrystal was prepared via solution-mediated phase transformation and its structure is sustained by O-H (phenol) ··· N (pyridyl) hydrogen bonds between two individual components. A cocrystal polymorph (Form II) was formed via solid state transformation or via vapor phase upon heating. Using gravimetry analysis, it was demonstrated that cocrystal Form I decreased the sublimation rate of thymol by 38-fold. This study demonstrates that cocrystallization is an effective approach to reduce vapor pressure and sublimation of solids, thus achieving odor-masking.
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- 2023
4. Discovery of ABBV-3373, an Anti-TNF Glucocorticoid Receptor Modulator Immunology Antibody Drug Conjugate
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Adrian D. Hobson, Michael J. McPherson, Martin E. Hayes, Christian Goess, Xiang Li, Jian Zhou, Zhongyuan Wang, Yajie Yu, Jindong Yang, Liang Sun, Qiang Zhang, Pei Qu, Shi Yang, Axel Hernandez, Shaughn H. Bryant, Suzanne L. Mathieu, Agnieszka K. Bischoff, Julia Fitzgibbons, Ling C. Santora, Lu Wang, Margaret M. Fettis, Xiaofeng Li, Christopher C. Marvin, Zhi Wang, Meena V. Patel, Diana L. Schmidt, Tongmei Li, John T. Randolph, Rodger F. Henry, Candace Graff, Yu Tian, Ana L. Aguirre, and Anurupa Shrestha
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Mice ,Receptors, Glucocorticoid ,Immunoconjugates ,Drug Discovery ,Humans ,Animals ,Molecular Medicine ,Tumor Necrosis Factor Inhibitors ,Glucocorticoids - Abstract
Using a convergent synthetic route to enable multiple points of diversity, a series of glucocorticoid receptor modulators (GRM) were profiled for potency, selectivity, and drug-like properties
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- 2022
5. Overcoming Bioavailability Challenges of Dasabuvir and Enabling a Triple-Combination Direct-Acting Antiviral HCV Regimen through a Salt of Very Weak Acid for Oral Delivery
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Shuang Chen, Yi Gao, Xiaochun Lou, Rodger F. Henry, DeAnne F. Stolarik, Maya P. Lipert, Ahmad Y. Sheikh, and Geoff G. Z. Zhang
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Pharmaceutical Preparations ,Solubility ,Drug Discovery ,Animals ,Biological Availability ,Pharmaceutical Science ,Molecular Medicine ,Hepacivirus ,Hepatitis C, Chronic ,Antiviral Agents ,Hepatitis C - Abstract
Dasabuvir is a non-nucleoside polymerase inhibitor for the treatment of hepatitis C virus (HCV) infection. It is an extremely weak diacidic drug (p
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- 2022
6. Implications of the Conformationally Flexible, Macrocyclic Structure of the First-Generation, Direct-Acting Anti-Viral Paritaprevir on Its Solid Form Complexity and Chameleonic Behavior
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David A. Degoey, Alessandra Mattei, Rodger F. Henry, Gabriela Schneider-Rauber, Moiz Diwan, Ahmad Y. Sheikh, Kenneth M. Engstrom, Erin Jordan, Nathan S. Abraham, Richard S. Hong, Vivian Juarez, Rajni Miglani Bhardwaj, Charles W. Hutchins, and Yi Gao
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Steric effects ,Hydrogen bond ,Chemistry ,Intermolecular force ,General Chemistry ,Biochemistry ,Catalysis ,Chemical space ,Polar surface area ,Colloid and Surface Chemistry ,Docking (molecular) ,Computational chemistry ,Intramolecular force ,Molecule - Abstract
Direct-acting antiviral regimens have transformed therapeutic management of hepatitis C across all prevalent genotypes. Most of the chemical matter in these regimens comprises molecules well outside the traditional drug development chemical space and presents significant challenges. Herein, the implications of high conformational flexibility and the presence of a 15-membered macrocyclic ring in paritaprevir are studied through a combination of advanced computational and experimental methods with focus on molecular chameleonicity and crystal form complexity. The ability of the molecule to toggle between high and low 3D polar surface area (PSA) conformations is underpinned by intramolecular hydrogen bonding (IMHB) interactions and intramolecular steric effects. Computational studies consequently show a very significant difference of over 75 A2 in 3D PSA between polar and apolar environments and provide the structural basis for the perplexingly favorable passive permeability of the molecule. Crystal packing and protein binding resulting in strong intermolecular interactions disrupt these intramolecular interactions. Crystalline Form I benefits from strong intermolecular interactions, whereas the weaker intermolecular interactions in Form II are partially compensated by the energetic advantage of an IMHB. Like Form I, no IMHB is observed within the receptor-bound conformation; instead, an intermolecular H-bond contributes to the potency of the molecule. The choice of metastable Form II is derisked through strategies accounting for crystal surface and packing features to manage higher form specific solid-state chemical reactivity and specific processing requirements. Overall, the results show an unambiguous link between structural features and derived properties from crystallization to dissolution, permeation, and docking into the protein pocket.
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- 2021
7. Enabling Suzuki-Miyaura coupling of Lewis-basic arylboronic esters with a nonprecious metal catalyst
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Michael C. Haibach, Andrew R. Ickes, Sergei Tcyrulnikov, Shashank Shekhar, Sebastien Monfette, Rafal Swiatowiec, Brian J. Kotecki, Jason Wang, Amanda L. Wall, Rodger F. Henry, and Eric C. Hansen
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General Chemistry - Abstract
The high cost and negative environmental impact of precious metal catalysts has led to increased demand for nonprecious alternatives for widely practiced reactions such as the Suzuki-Miyaura coupling (SMC). Ni-catalyzed versions of this reaction have failed to achieve high reactivity with Lewis-basic arylboron nucleophiles, especially pinacolboron esters. We describe the development of (PPh
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- 2022
8. Correction to 'Discovery of ABBV-3373, an Anti-TNF Glucocorticoid Receptor Modulator Immunology Antibody Drug Conjugate'
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Adrian D. Hobson, Michael J. McPherson, Martin E. Hayes, Christian Goess, Xiang Li, Jian Zhou, Zhongyuan Wang, Yajie Yu, Jindong Yang, Liang Sun, Qiang Zhang, Pei Qu, Shi Yang, Axel Hernandez, Shaughn H. Bryant, Suzanne L. Mathieu, Agnieszka K. Bischoff, Julia Fitzgibbons, Ling C. Santora, Lu Wang, Margaret M. Fettis, Xiaofeng Li, Christopher C. Marvin, Zhi Wang, Meena V. Patel, Diana L. Schmidt, Tongmei Li, John T. Randolph, Rodger F. Henry, Candace Graff, Yu Tian, Ana L. Aguirre, and Anurupa Shrestha
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Drug Discovery ,Molecular Medicine - Published
- 2023
9. Pd-Catalyzed Cross-Coupling of Hindered, Electron-Deficient Anilines with Bulky (Hetero)aryl Halides Using Biaryl Phosphorinane Ligands
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Rafal Swiatowiec, Rodger F. Henry, Jeffrey T. Bien, Jeremy J. Henle, Shardrack O. Asare, Alison M. Wilders, Shashank Shekhar, Amanda L. Wall, and Michael C. Haibach
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010405 organic chemistry ,Aryl ,chemistry.chemical_element ,Halide ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Medicinal chemistry ,Catalysis ,0104 chemical sciences ,Coupling (electronics) ,chemistry.chemical_compound ,chemistry ,Amination ,Palladium - Abstract
Biaryl phosphorinane ligands derived from addition of biaryl primary phosphines to trans,trans-dibenzylideneacetone (AlisonPhos and AliPhos) form highly active ligands for Pd-catalyzed coupling of ...
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- 2020
10. Development of a Large-Scale Route to Glecaprevir: Synthesis of the Side Chain and Final Assembly
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Rodger F. Henry, Chen Ding, Sanjay R. Chemburkar, Shuang Chen, Hongqiang Zhang, Nandkishor K. Nere, Jianzhang Mei, Kirill A. Lukin, Rajarathnam E. Reddy, David R. Hill, Matthew J. Pelc, Angelica B. Kielbus, Timothy B. Towne, Michael J. Abrahamson, Kenneth M. Engstrom, and Russell D. Cink
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Scale (ratio) ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Hcv protease ,Side chain ,Knoevenagel condensation ,Glecaprevir ,Physical and Theoretical Chemistry ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences - Abstract
The preceding article described the development of the large-scale synthetic route to macrocycle 3 of glecaprevir (1), a potent HCV protease inhibitor. This article describes the development of the...
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- 2020
11. Small Molecule IL-36γ Antagonist as a Novel Therapeutic Approach for Plaque Psoriasis
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K. Salte, Paul L. Richardson, J.M. Herold, Chaohong Sun, Argiriadi, B. Sielaff, L. Medina, Heath A. McDonald, Sujatha M. Gopalakrishnan, Victoria E. Scott, W. Qiu, J. Wetter, S.J. Kakavas, S.E. Paulsboe, Ramkrishna Sadhukhan, Henning Stöckmann, Rodger F. Henry, J.B. Shotwell, Zhi Su, C.B. Putman, S. McGaraughty, Qi Sun, C. Gerstein, Viktor Todorović, and P. Honore
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Ambrisentan ,medicine.medical_treatment ,lcsh:Medicine ,Inflammation ,Human skin ,Pharmacology ,Article ,Small Molecule Libraries ,Mice ,Downregulation and upregulation ,Psoriasis ,medicine ,Animals ,Humans ,lcsh:Science ,Skin ,Multidisciplinary ,Drug discovery ,Chemistry ,Interleukins ,lcsh:R ,Antagonist ,medicine.disease ,Small molecule ,Cytokine ,Gene Expression Regulation ,lcsh:Q ,medicine.symptom ,Interleukin-1 ,medicine.drug - Abstract
IL-36 cytokines are pro-inflammatory members of the IL-1 family that are upregulated in inflammatory disorders. Specifically, IL-36γ is highly expressed in active psoriatic lesions and can drive pro-inflammatory processes in 3D human skin equivalents supporting a role for this target in skin inflammation. Small molecule antagonists of interleukins have been historically challenging to generate. Nevertheless, we performed a small molecule high-throughput screen to identify IL-36 antagonists using a novel TR-FRET binding assay. Several compounds, including 2-oxypyrimidine containing structural analogs of the marketed endothelin receptor A antagonist Ambrisentan, were identified as hits from the screen. A-552 was identified as a the most potent antagonist of human IL-36γ, but not the closely related family member IL-36α, was capable of attenuating IL-36γ induced responses in mouse and human disease models. Additionally, x-ray crystallography studies identified key amino acid residues in the binding pocket present in human IL-36γ that are absent in human IL-36α. A-552 represents a first-in-class small molecule antagonist of IL-36 signaling that could be used as a chemical tool to further investigate the role of this pathway in inflammatory skin diseases such as psoriasis.
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- 2019
12. Targeting lysine specific demethylase 4A (KDM4A) tandem TUDOR domain – A fragment based approach
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Anup K. Upadhyay, Ron Pithawalla, Rodger F. Henry, Russell A. Judge, Chaohong Sun, Justin A. Simanis, Leiming Li, Violeta L. Marin, Andrew M. Petros, and Pierre M. Bodelle
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0301 basic medicine ,Jumonji Domain-Containing Histone Demethylases ,Tudor domain ,Clinical Biochemistry ,Allosteric regulation ,Lysine ,Fragment-based lead discovery ,Pharmaceutical Science ,Biochemistry ,Histone H4 ,Structure-Activity Relationship ,03 medical and health sciences ,Histone H3 ,Oxidoreductase ,Drug Discovery ,Humans ,Nuclear Magnetic Resonance, Biomolecular ,Molecular Biology ,chemistry.chemical_classification ,Dose-Response Relationship, Drug ,Molecular Structure ,Tudor Domain ,030102 biochemistry & molecular biology ,Chemistry ,Organic Chemistry ,Hydrogen Bonding ,Chromatin ,030104 developmental biology ,Molecular Medicine ,Hydrophobic and Hydrophilic Interactions - Abstract
The tandem TUDOR domains present in the non-catalytic C-terminal half of the KDM4A, 4B and 4C enzymes play important roles in regulating their chromatin localizations and substrate specificities. They achieve this regulatory role by binding to different tri-methylated lysine residues on histone H3 (H3-K4me3, H3-K23me3) and histone H4 (H4-K20me3) depending upon the specific chromatin environment. In this work, we have used a 2D-NMR based fragment screening approach to identify a novel fragment (1a), which binds to the KDM4A-TUDOR domain and shows modest competition with H3-K4me3 binding in biochemical as well as in vitro cell based assays. A co-crystal structure of KDM4A TUDOR domain in complex with 1a shows that the fragment binds stereo-specifically to the methyl lysine binding pocket forming a network of strong hydrogen bonds and hydrophobic interactions. We anticipate that the fragment 1a can be further developed into a novel allosteric inhibitor of the KDM4 family of enzymes through targeting their C-terminal tandem TUDOR domain.
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- 2018
13. Reducing a cocrystal to nanoscale dimensions enables retention of physical crystal integrity upon dehydration
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Rodger F. Henry, Geoff G. Z. Zhang, Leonard R. MacGillivray, and Katherine E. Peterson
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Chemistry ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Crystal morphology ,medicine.disease ,01 natural sciences ,Cocrystal ,0104 chemical sciences ,Crystal ,Crystallography ,medicine ,General Materials Science ,Dehydration ,0210 nano-technology ,Nanoscopic scale - Abstract
We report the preparation and dehydration of a cocrystal of caffeine and 2,4-dihydroxybenzoic acid. The dehydration of cocrystals of macro-dimensions results in destruction of crystal morphology; however, crystal morphology is retained when the cocrystal is reduced to nanometer-dimensions, despite a lack of pores to accommodate loss of water.
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- 2017
14. Synthesis and evaluation of 2'-dihalo ribonucleotide prodrugs with activity against hepatitis C virus
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Preethi Krishnan, Rodger F. Henry, Christopher C. Marvin, Tatyana Dekhtyar, Rolf Wagner, John T. Randolph, A. Chris Krueger, David A. Degoey, Vincent Peterkin, Michelle Irvin, Geoff T. Halvorsen, Jason P. Shanley, Heyman Howard R, Eric A. Voight, Robert A. Carr, Cecilia Van Handel, Tongmei Li, Brian S. Brown, Daniel A.J. Bow, Hui-Ju Chen, and DeAnne Stolarik
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Sofosbuvir ,Hepatitis C virus ,Clinical Biochemistry ,Pharmaceutical Science ,Hepacivirus ,Microbial Sensitivity Tests ,Pharmacology ,medicine.disease_cause ,Virus Replication ,01 natural sciences ,Biochemistry ,Antiviral Agents ,chemistry.chemical_compound ,Structure-Activity Relationship ,In vivo ,Drug Discovery ,medicine ,Humans ,Prodrugs ,Molecular Biology ,NS5B ,Uridine ,Dose-Response Relationship, Drug ,Molecular Structure ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Phosphoramidate ,Hepatitis C ,Prodrug ,medicine.disease ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Hepatocytes ,Molecular Medicine ,Nucleoside ,medicine.drug - Abstract
Download : Download high-res image (149KB) Download : Download full-size image Hepatitis C virus (HCV) nucleoside inhibitors have been a key focus of nearly 2 decades of HCV drug research due to a high barrier to drug resistance and pan-genotypic activity profile provided by molecules in this drug class. Our investigations focused on several potent 2′-halogenated uridine-based HCV polymerase inhibitors, resulting in the discovery of novel 2′-deoxy-2′-dihalo-uridine analogs that are potent inhibitors in replicon assays for all genotypes. Further studies to improve in vivo performance of these nucleoside inhibitors identified aminoisobutyric acid ethyl ester (AIBEE) phosphoramidate prodrugs 18a and 18c, which provide high levels of the active triphosphate in dog liver. AIBEE prodrug 18c was compared with sofosbuvir (1) by co-dosing both compounds by oral administration in dog (5 mg/kg each) and measuring liver concentrations of the active triphosphate metabolite at both 4 and 24 h post dosing. In this study, 18c provided liver triphosphate concentrations that were 6-fold higher than sofosbuvir (1) at both biopsy time points, suggesting that 18c could be a highly effective agent for treating HCV infected patients in the clinic.
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- 2019
15. Synthesis and Pharmacology of (Pyridin-2-yl)methanol Derivatives as Novel and Selective Transient Receptor Potential Vanilloid 3 Antagonists
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Philip R. Kym, Arthur Gomtsyan, Gregory A. Gfesser, Bin Li, Regina M. Reilly, Bruce Clapham, Jerome F. Daanen, Rodger F. Henry, Torben R. Neelands, Pamela S. Puttfarcken, Susan M. Huang, Robert G. Schmidt, Robert J. Altenbach, S.K. Joshi, Huaqing Liu, Marlon D. Cowart, David N. Whittern, Phil B. Cox, Jill-Desiree Brederson, Michael J. Dart, Anurupa Shrestha, Donna Gauvin, Michael E. Kort, Erol K. Bayburt, Ping Song, Steve McGaraughty, Connie R. Faltynek, Heath A. McDonald, Patricia N. Banfor, Diana Schmidt, Eric A. Voight, Mohamad Shebley, and Jason A. Segreti
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TRPV3 ,Pyridines ,Molecular Conformation ,TRPV Cation Channels ,Pharmacology ,010402 general chemistry ,01 natural sciences ,Structure-Activity Relationship ,Transient receptor potential channel ,Drug Discovery ,medicine ,Humans ,Structure–activity relationship ,Selective receptor modulator ,ADME ,Dose-Response Relationship, Drug ,010405 organic chemistry ,Chemistry ,Antagonist ,Reserpine ,0104 chemical sciences ,HEK293 Cells ,Neuropathic pain ,Molecular Medicine ,Calcium ,Cyclobutanes ,medicine.drug - Abstract
Transient receptor potential vanilloid 3 (TRPV3) is a Ca(2+)- and Na(+)-permeable channel with a unique expression pattern. TRPV3 is found in both neuronal and non-neuronal tissues, including dorsal root ganglia, spinal cord, and keratinocytes. Recent studies suggest that TRPV3 may play a role in inflammation, pain sensation, and skin disorders. TRPV3 studies have been challenging, in part due to a lack of research tools such as selective antagonists. Herein, we provide the first detailed report on the development of potent and selective TRPV3 antagonists featuring a pyridinyl methanol moiety. Systematic optimization of pharmacological, physicochemical, and ADME properties of original lead 5a resulted in identification of a novel and selective TRPV3 antagonist 74a, which demonstrated a favorable preclinical profile in two different models of neuropathic pain as well as in a reserpine model of central pain.
- Published
- 2016
16. Synthon Hierarchies in Crystal Forms Composed of Theophylline and Hydroxybenzoic Acids: Cocrystal Screening via Solution-Mediated Phase Transformation
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Leonard R. MacGillivray, Rodger F. Henry, Dejan-Krešimir Bučar, and Geoff G. Z. Zhang
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chemistry.chemical_classification ,Hydroxybenzoic acid ,Chemistry ,Carboxylic acid ,Synthon ,Salt (chemistry) ,General Chemistry ,Condensed Matter Physics ,Cocrystal ,Phase (matter) ,medicine ,Molecule ,Organic chemistry ,General Materials Science ,Theophylline ,medicine.drug - Abstract
Theophylline, a pharmaceutical model compound, was screened for cocrystal formation using nine (di)hydroxybenzoic acids as cocrystal formers, namely, 2-, 3-, 4-hydroxybenzoic- and 2,3-, 2,4-, 2,5-, 2,6-, 3,4-, and 3,5-dihydroxybenzoic acids. The experiments were conducted using an efficient, reliable, and fast screening method based on thermodynamically driven solution-mediated phase transformation and revealed the formation of eight cocrystals and one salt. The theophylline-based solids were identified using powder and structurally characterized via single-crystal X-ray diffraction. The obtained solids are sustained by theopylline-carboxylic acid heterosynthons, in addition to both theophylline and carboxylic acid homosynthons. The results are a part of a systematic study of xanthine-alkaloid cocrystals that aims to establish synthon hierarchies in cocrystals comprised of molecules with multiple hydrogen-bonding functional groups. Structural features and synthon hierachies are discussed and compared to t...
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- 2014
17. 677 Discovery and characterization of a small molecule IL-36γ antagonist as a novel approach to treat plaque psoriasis
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P. Honore, Sujatha M. Gopalakrishnan, C. Gerstein, S.E. Paulsboe, K. Salte, S.J. Kakavas, L. Medina, Heath A. McDonald, L. Olson, Chaohong Sun, W. Qiu, Paul L. Richardson, M.J. Herold, M.A. Argiriadi, Viktor Todorović, J.B. Shotwell, Qi Sun, Rodger F. Henry, C.B. Putman, S. McGaraughty, Victoria E. Scott, Henning Stöckmann, B. Sielaff, J. Wetter, and Zhi Su
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Plaque psoriasis ,Chemistry ,Cancer research ,Antagonist ,Cell Biology ,Dermatology ,Molecular Biology ,Biochemistry ,Small molecule - Published
- 2019
18. Supramolecular Complexes of Sulfadiazine and Pyridines: Reconfigurable Exteriors and Chameleon-like Behavior of Tautomers at the Co-Crystal–Salt Boundary
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Rodger F. Henry, Geoff G. Z. Zhang, Elizabeth Elacqua, Leonard R. MacGillivray, and Dejan-Krešimir Bučar
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Stereochemistry ,Dimer ,Supramolecular chemistry ,General Chemistry ,Condensed Matter Physics ,Crystal engineering ,Tautomer ,Amidine ,chemistry.chemical_compound ,Piperazine ,chemistry ,Pyridine ,Polymer chemistry ,General Materials Science ,Pyridinium - Abstract
We apply crystal engineering principles to prepare organic co-crystals and salts of sulfadiazine and pyridines. Pyridines are molecular building blocks utilized in crystal engineering that can disrupt the hydrogen bonded (amidine) N–H···N (pyrimidine) dimer within the parent sulfa drug (SD) crystals, while providing access to both co-crystals and salts. We have synthesized four co-crystals and three salts of sulfadiazine involving N,N-dimethyl-4-aminopyridine, 4-aminopyridine, 4-picoline, 4,4′-bipyridine, (E)-1,2-bis(4-pyridyl)ethylene, 1,2-bis(4-pyridyl)acetylene, and 4-(pyridin-4-yl)piperazine. Single-crystal X-ray analyses reveal three hydrogen-bond motifs, namely, dyads, rings, and chains based involving either (amidine/aniline) N–H···N (pyridine/pyrimidine), (pyridinium) +N–H···N– (amidide), (aniline/piperazine) N–H···O2S (sulfoxide) interactions, or a combination thereof. The hydrogen-bond motifs are assigned as D11(2), R22(8), R22(20), C22(17), and C22(13) graph sets. An analysis of the Cambridge S...
- Published
- 2012
19. ChemInform Abstract: Pd-Catalyzed Synthesis of Aryl and Heteroaryl Triflones from Reactions of Sodium Triflinate with Aryl (Heteroaryl) Triflates
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Eric M. Phillips, Rodger F. Henry, Lynette A. Smyth, Shashank Shekhar, José G. Napolitano, and Vincent S. Chan
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Reaction conditions ,Transmetalation ,chemistry.chemical_compound ,chemistry ,Nucleophile ,Sodium ,Aryl ,chemistry.chemical_element ,Reactivity (chemistry) ,General Medicine ,Medicinal chemistry ,Catalysis - Abstract
A novel method for Pd-catalyzed triflination of aryl and heteroaryl triflates using NaSO2CF3 as the nucleophile is described. The combination of Pd2(dba)3 and RockPhos formed the most effective catalyst. A broad range of functional groups and heteroaromatic compounds were tolerated under the neutral reaction conditions. The order of reactivity ArOTf ≥ ArCl ≥ ArBr is consistent with transmetalation being a slow step of the reaction.
- Published
- 2016
20. Pd-Catalyzed Synthesis of Aryl and Heteroaryl Triflones from Reactions of Sodium Triflinate with Aryl (Heteroaryl) Triflates
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Shashank Shekhar, Vincent S. Chan, Rodger F. Henry, José G. Napolitano, Eric M. Phillips, and Lynette A. Smyth
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Reaction conditions ,010405 organic chemistry ,Sodium ,Aryl ,Organic Chemistry ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,Transmetalation ,Nucleophile ,chemistry ,Reactivity (chemistry) - Abstract
A novel method for Pd-catalyzed triflination of aryl and heteroaryl triflates using NaSO2CF3 as the nucleophile is described. The combination of Pd2(dba)3 and RockPhos formed the most effective catalyst. A broad range of functional groups and heteroaromatic compounds were tolerated under the neutral reaction conditions. The order of reactivity ArOTf ≥ ArCl ≥ ArBr is consistent with transmetalation being a slow step of the reaction.
- Published
- 2016
21. Synthesis and SAR of 4-aminocyclopentapyrrolidines as N-type Ca2+ channel blockers with analgesic activity
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Andrew O. Stewart, Janel M. Boyce-Rustay, Ivan Milicic, Chang Z. Zhu, Jill M. Wetter, Timothy A. Vortherms, Michael F. Jarvis, Marian T. Namovic, Diana L. Donnelly-Roberts, Chengmin Zhong, Victoria E. Scott, Karen Kage, Rodger F. Henry, Erica Gomez, Scott J. Baker, Carol S. Surowy, Daria Darczak, Pamela H. Franklin, Gricelda H. Simler, Wende Niforatos, Richard S. Janis, Andrew M. Swensen, Kennan C. Marsh, and Xenia Beebe
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Voltage-dependent calcium channel ,Chemistry ,Stereochemistry ,Organic Chemistry ,Clinical Biochemistry ,Analgesic ,Pharmaceutical Science ,N-type calcium channel ,Pharmacology ,Biochemistry ,chemistry.chemical_compound ,Electrophysiology ,Sulfinamide ,Drug Discovery ,Molecular Medicine ,Structure–activity relationship ,L-type calcium channel ,Channel blocker ,Molecular Biology - Abstract
A novel 4-aminocyclopentapyrrolidine series of N-type Ca(2+) channel blockers have been discovered. Enantioselective synthesis of the 4-aminocyclopentapyrrolidines was enabled using N-tert-butyl sulfinamide chemistry. SAR studies demonstrate selectivity over L-type Ca(2+) channels. N-type Ca(2+) channel blockade was confirmed using electrophysiological recording techniques. Compound 25 is an N-type Ca(2+) channel blocker that produces antinociception in inflammatory and nociceptive pain models without exhibiting cardiovascular or motor liabilities.
- Published
- 2012
22. A 1:1 Cocrystal of Caffeine and 2-Hydroxy-1-Naphthoic Acid Obtained via a Slurry Screening Method
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Geoff G. Z. Zhang, Richard W. Duerst, Xiaochun Lou, Rodger F. Henry, Dejan-Krešimir Bučar, and Leonard R. MacGillivray
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chemistry.chemical_compound ,Crystallography ,Hydrogen bond ,Chemistry ,Intramolecular force ,Intermolecular force ,General Chemistry ,Self-assembly ,Crystal structure ,Condensed Matter Physics ,Cocrystal ,Organometallic chemistry ,Monoclinic crystal system - Abstract
A cocrystal of caffeine (caf) and 2-hydroxy-1-naphthoic acid (2H1NA), namely, (caf)·(2H1NA), was discovered via a screening method based on solution-mediated phase transformation (SMPT). The components crystallize as a two-component hydrogen-bonded assembly involving both an intermolecular O–H···N and intramolecular O–H···O hydrogen bond. The assemblies stack parallel and offset. Crystal data: monoclinic P 21/n space group, a = 7.909(2) A, b = 15.275(5) A, c = 14.704(5) A, β = 103.66(1)°, Z = 4, V = 1726.1(9) A3, D c = 1.471 g/cm3 and R 1 = 0.081, wR 2 = 0.163. The cocrystal (caf)·(2H1NA) was also subjected to polymorph screening using 15 different solvents, with all resulting solids being identified as the original form. A cocrystal of caffeine and 2-hydroxy-1-naphthoic acid was discovered via a screening method and is shown to form a two-component hydrogen-bonded molecular assembly based on an intermolecular O–H⋯N and intramolecular O–H⋯O hydrogen bond.
- Published
- 2010
23. The effects of tautomerism on the nature of molecules in the solid state
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Rodger F. Henry
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Models, Molecular ,Sulfonamides ,Crystallography ,Pyridines ,Pyridones ,Chemistry ,Solid-state ,Tautomer ,Computer Science Applications ,Isomerism ,Chemical physics ,Drug Discovery ,Molecule ,Physical and Theoretical Chemistry - Abstract
Tautomerism is a phenomenon well know to most chemists but frequently forgotten when chemistry leaves the bench and enters the computational realm. Through the examination of several examples from the crystallographic literature it can be clearly demonstrated that the tautomeric state of a molecules can strongly affect its nature.
- Published
- 2010
24. Synthesis and Biological Characterization of B-Ring Amino Analogues of Potent Benzothiadiazine Hepatitis C Virus Polymerase Inhibitors
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Rodger F. Henry, Gennadiy Koev, Larry L. Klein, David W A Beno, Debra Montgomery, John T. Randolph, Wen W. Jiang, Thomas Reisch, Charles A. Flentge, Warren M. Kati, Hutchinson Douglas K, Sherie Masse, Dale J. Kempf, Akhteruzzaman Molla, Kent D. Stewart, Lisa E. Hernandez, Peggy P. Huang, Yaya Liu, Hock Ben Lim, and Rubina Mondal
- Subjects
Genotype ,Hepatitis C virus ,Hepacivirus ,Microbial Sensitivity Tests ,Benzothiadiazines ,medicine.disease_cause ,Antiviral Agents ,Structure-Activity Relationship ,chemistry.chemical_compound ,Bacterial Proteins ,RNA polymerase ,Drug Discovery ,medicine ,Animals ,Tissue Distribution ,Replicon ,Enzyme Inhibitors ,NS5B ,Polymerase ,chemistry.chemical_classification ,biology ,RNA-Dependent RNA Polymerase ,Rats ,Enzyme ,Liver ,Biochemistry ,chemistry ,Benzothiadiazine ,Enzyme inhibitor ,biology.protein ,Molecular Medicine - Abstract
Benzothiadiazine inhibitors of the HCV NS5B RNA-dependent RNA polymerase are an important class of non-nucleoside inhibitors that have received considerable attention in the search for novel HCV therapeutics. Research in our laboratories has identified a novel series of tetracyclic benzothiadiazine inhibitors of HCV polymerase bearing a benzylamino substituent on the B-ring. Compounds in this series exhibit low-nanomolar activities in both genotypes 1a and 1b polymerase inhibition assays and subgenomic replicon assays. Optimization of pharmacokinetic properties in rat led to compound 30, which has good oral bioavailability (F = 56%) and a favorable tissue distribution drug profile, with high liver to plasma ratios. Compound 30 is a potent inhibitor in replicon assays, with EC(50) values of 10 and 6 nM against genotypes 1a and 1b, respectively.
- Published
- 2009
25. Cocrystals of Caffeine and Hydroxybenzoic Acids Composed of Multiple Supramolecular Heterosynthons: Screening via Solution-Mediated Phase Transformation and Structural Characterization
- Author
-
Geoff G. Z. Zhang, Xiaochun Lou, Leonard R. MacGillivray, Dejan-Krešimir Bučar, Richard W. Duerst, and Rodger F. Henry
- Subjects
chemistry.chemical_classification ,Hydroxybenzoic acid ,Hydrogen bond ,Chemistry ,Carboxylic acid ,Supramolecular chemistry ,General Chemistry ,Condensed Matter Physics ,Cocrystal ,chemistry.chemical_compound ,Structural isomer ,Organic chemistry ,Imidazole ,Moiety ,General Materials Science - Abstract
Caffeine, a pharmaceutical model compound, generally forms cocrystals with carboxylic acids that involve an O−H···N hydrogen bond between the carboxylic acid group of the acid and the caffeine imidazole moiety. Such solids are typically based on a single heterosynthon. To examine the facility of introducing additional supramolecular heterosynthons to the caffeine-carboxylic-acid cocrystal system, structural isomers of aromatic carboxylic acids (i.e., hydroxy- and dihydroxybenzoic acids) with additional hydrogen-bonding functional groups (i.e., hydroxy group) were screened for cocrystal formation. For this purpose, a highly efficient screening method based on thermodynamically driven solution-mediated phase transformation was utilized. This method enabled the rapid discovery of nine new solid phases involving caffeine. These caffeine phases were identified using single-crystal X-ray diffraction and FT-IR spectroscopy as cocrystals based on 2-, 3-, 4-hydroxybenzoic- and 2,3-, 2,4-, 2,5-, 3,4-, and 3,5-dihyd...
- Published
- 2009
26. Regiochemistry of addition of aminoheterocycles to α-cyanocinnamonitriles: formation of aza-bridged bi- and tricycles
- Author
-
Thomas G. Pagano, Jeffrey L. Cross, Kunzer Aaron R, Rodger F. Henry, and Wendt Michael D
- Subjects
Stereochemistry ,Chemistry ,Organic Chemistry ,Regioselectivity ,General Medicine ,Ring (chemistry) ,Biochemistry ,Combinatorial chemistry ,Nucleophile ,Drug Discovery ,Electrophile ,Product formation ,Two-dimensional nuclear magnetic resonance spectroscopy ,Conjugate - Abstract
The additions of various five-membered ring aminoheterocycles to α-cyanocinnamonitriles were studied. Regiochemistry of product formation can in most cases be controlled by choosing the appropriate electrophile. An α-cyanocinnamonitrile with an additional β-leaving group normally provides products arising from initial attack of the ring amino group, while exo attack predominates in the case of the parent α-cyanocinnamonitrile. Aminopyrazole and aminoindazole provide only exo products with either electrophile. Product assignments were made via X-ray and 2D NMR methods; these assignments serve as a benchmark to several literature references and to future investigations of conjugate additions of these nucleophiles.
- Published
- 2007
27. Synthesis of Novel and Uniquely Shaped 3-Azabicyclo[4.2.0]octan-4-one Derivatives by Sequential Ugi/[2+2] Ene−Enone Photocycloadditions
- Author
-
Rodger F. Henry, Alan Whitehead, Stevan W. Djuric, Irini Akritopoulou-Zanze, and Jan E. Waters
- Subjects
chemistry.chemical_compound ,Chemistry ,Stereochemistry ,Organic Chemistry ,Organic chemistry ,General Medicine ,Physical and Theoretical Chemistry ,Biochemistry ,Enone ,Ene reaction - Abstract
[structure: see text]. We report a new methodology for the construction of novel and uniquely shaped 3-azabicyclo[4.2.0]octan-4-one derivatives by combining the Ugi multicomponent reaction with [2+2] enone-olefin photochemical transformations. The overall sequence is capable of creating up to five stereocenters; however, in most cases, only two diastereomers are observed.
- Published
- 2007
28. Synthesis of the glucuronide metabolite of ABT-751
- Author
-
Rodger F. Henry, Ian Marsden, and Kenneth M. Engstrom
- Subjects
chemistry.chemical_classification ,chemistry.chemical_compound ,Aglycone ,Chemistry ,Stereochemistry ,Metabolite ,Organic Chemistry ,Drug Discovery ,Convergent synthesis ,Glycosidic bond ,Glucuronide ,Biochemistry - Abstract
A linear synthesis of the glucuronide metabolite of ABT-751 was replaced with a convergent synthesis that features direct glycosidic coupling between the aglycone and a trichloroacetimidate glucuronyl donor. Structural elucidation of a unique and unexpected difluoroboron complex of the desired glycosidic coupling product along with optimization of the synthetic steps is described.
- Published
- 2007
29. Discovery and Metabolic Stabilization of Potent and Selective 2-Amino-N-(adamant-2-yl) Acetamide 11β-Hydroxysteroid Dehydrogenase Type 1 Inhibitors
- Author
-
Hovis M. Imade, Hing L. Sham, Liping Pan, Linda E. Chovan, Heidi S. Camp, Bryan K. Sorensen, Rodger F. Henry, Jiahong Wang, Atul Ramaiya, Mark M. Mullally, Rohde Jeffrey J, J.T. Link, William J. Chiou, Katina Monzon, Peer B. Jacobson, Thomas A. Fey, Kennan C. Marsh, Xiaoqing Deng, David W A Beno, DeAnne Stolarik, Brian A. Droz, Steven Fung, Michael E. Brune, Ernst U. Frevert, Marina A. Pliushchev, Qi Shuai, and Dariusz Wodka
- Subjects
Adamantane ,Dehydrogenase ,In Vitro Techniques ,Piperazines ,Cell Line ,Mice ,Structure-Activity Relationship ,chemistry.chemical_compound ,In vivo ,11β-hydroxysteroid dehydrogenase type 1 ,11-beta-Hydroxysteroid Dehydrogenase Type 1 ,Drug Discovery ,Animals ,Humans ,Structure–activity relationship ,Tissue Distribution ,chemistry.chemical_classification ,biology ,Chemistry ,Stereoisomerism ,Rats ,Enzyme ,Biochemistry ,Enzyme inhibitor ,Microsomes, Liver ,biology.protein ,Molecular Medicine ,Ex vivo - Abstract
Starting from a rapidly metabolized adamantane 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1) inhibitor 22a, a series of E-5-hydroxy-2-adamantamine inhibitors, exemplified by 22d and (+/-)-22f, was discovered. Many of these compounds are potent inhibitors of 11beta-HSD1 and are selective over 11beta-HSD2 for multiple species (human, mouse, and rat), unlike other reported species-selective series. These compounds have good cellular potency and improved microsomal stability. Pharmacokinetic profiling in rodents indicated moderate to large volumes of distribution, short half-lives, and a pharmacokinetic species difference with the greatest exposure measured in rat with 22d. One hour postdose liver, adipose, and brain tissue 11beta-HSD1 inhibition was confirmed with (+/-)-22f in a murine ex vivo assay. Although 5,7-disubstitued-2-adamantamines provided greater stability, a single, E-5-position, polar functional group afforded inhibitors with the best combination of stability, potency, and selectivity. These results indicate that adamantane metabolic stabilization sufficient to obtain short-acting, potent, and selective 11beta-HSD1 inhibitors has been discovered.
- Published
- 2006
30. Design, Synthesis, and Computational Studies of Inhibitors of Bcl-XL
- Author
-
Steven W. Elmore, Paul Nimmer, Haichao Zhang, Tetsuro Oie, Andrew M. Petros, Cheol-Min Park, and Rodger F. Henry
- Subjects
Models, Molecular ,Steric effects ,Binding Sites ,Magnetic Resonance Spectroscopy ,Pi system ,Chemistry ,Stereochemistry ,bcl-X Protein ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Crystallography, X-Ray ,Ligands ,Ligand (biochemistry) ,Biochemistry ,Small molecule ,Catalysis ,Protein Structure, Tertiary ,Colloid and Surface Chemistry ,Drug Design ,Molecule ,Computer Simulation ,Target protein ,Binding site - Abstract
One of the primary objectives in the design of protein inhibitors is to shape the three-dimensional structures of small molecules to be complementary to the binding site of a target protein. In the course of our efforts to discover potent inhibitors of Bcl-2 family proteins, we found a unique folded conformation adopted by tethered aromatic groups in the ligand that significantly enhanced binding affinity to Bcl-XL. This finding led us to design compounds that were biased by nonbonding interactions present in a urea tether to adopt this bioactive, folded motif. To characterize the key interactions that induce the desired conformational bias, a series of substituted N,N'-diarylureas were prepared and analyzed using X-ray crystallography and quantum mechanical calculations. Stabilizing pi-stacking interactions and destabilizing steric interactions were predicted to work in concert in two of the substitution patterns to promote the bioactive conformation as a global energy minimum and result in a high target binding affinity. Conversely, intramolecular hydrogen bonding present in the third substitution motif promotes a less active, extended conformer as the energetically favored geometry. These findings were corroborated when the inhibition constant of binding to Bcl-XL was determined for fully elaborated analogues bearing these structural motifs. Finally, we obtained the NMR solution structure of the disubstituted N,N'-diarylurea bound to Bcl-XL demonstrating the folded conformation of the urea motif engaged in extensive pi-interactions with the protein.
- Published
- 2006
31. Synthesis of the Quinolone ABT-492: Crystallizations for Optimal Processing
- Author
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Kurt B. Pearl, Elaine C. Lee, Larry Morin, Nancy J. Benz, Rodger F. Henry, Margaret C. Hsu, Sema Z. Ariman, Francoix X. Gueffier, David M. Barnes, Daniel J. Plata, Anthony R. Haight, Matthew J. Peterson, and David R. Willcox
- Subjects
medicine.drug_class ,Chemistry ,Organic Chemistry ,medicine ,Physical and Theoretical Chemistry ,Quinolone ,Combinatorial chemistry - Abstract
ABT-492 has been under development at Abbott Laboratories as a quinolone antibiotic. A convergent syntheses was utilized to prepare the compound on a multi-kilogram scale. Difficulties in isolation of intermediates were overcome by developing control of the physical forms. Examples of controlling the agglomeration, crystal habit, and polymorphism of intermediates and the API are described.
- Published
- 2006
32. An Efficient, Stereoselective Synthesis of the Hydroxyethylene Dipeptide Isostere Core for the HIV Protease Inhibitor A-792611
- Author
-
Rodger F. Henry, Yu-Ming Pu, Weifeng Wang, L. Steven Hollis, Ian Marsden, Brian J. Kotecki, Seble Wagaw, and Kenneth M. Engstrom
- Subjects
Models, Molecular ,chemistry.chemical_classification ,Dipeptide ,Pyridines ,Stereochemistry ,Isostere ,Organic Chemistry ,Molecular Conformation ,Epoxide ,Esters ,Stereoisomerism ,Protonation ,Dipeptides ,HIV Protease Inhibitors ,Crystallography, X-Ray ,Chemical synthesis ,chemistry.chemical_compound ,chemistry ,HIV Protease Inhibitor ,Stereoselectivity ,Lactone - Abstract
A stereoselective synthesis of the hydroxyethylene dipeptide isostere 1 is described. The route employs a substrate-directed kinetic protonation of an alpha/gamma-substituted lactone to afford the desired stereochemistry. A method for converting the diastereomerically enriched intermediate lactone to the ring-open form with retention of stereochemistry is demonstrated. A novel procedure for utilizing N,N-dibromo-5,5-dimethylhydantoin in Hofmann rearrangements is disclosed. This route was used to prepare amino alcohol 1, the core portion of the HIV protease inhibitor A-792611, in 46% yield from phenylalanine-derived epoxide 2.
- Published
- 2006
33. Synthesis of a novel farnesyl transferase inhibitor, ABT-100; selective preparation of a stereogenic tertiary carbinol
- Author
-
Bridget D. Rohde, Lakshmi Bhagavatula, James J. Tien, Michael J. Rozema, Albert W. Kruger, Weijiang Zhang, Rodger F. Henry, and Bhadra Shelat
- Subjects
Chiral auxiliary ,Stereochemistry ,organic chemicals ,Farnesyl Transferase Inhibitor ,Organic Chemistry ,Diol ,Biochemistry ,Stereocenter ,chemistry.chemical_compound ,chemistry ,Suzuki reaction ,Nucleophilic aromatic substitution ,Reagent ,Drug Discovery ,Stereoselectivity - Abstract
A stereoselective synthesis of ABT-100 1 , a novel farnesyl transferase inhibitor, is described. The key step involves a stereoselective addition of the heterocyclic zinc reagent 10 to chiral α-keto ester 9 in >10:1 diastereoselectivity using menthol as the chiral auxiliary. Crystallization of the product as the dimeric zinc complex facilitates isolation of product in >99:1 dr. The biaryl linkage is formed by the use of a Suzuki coupling employing only 0.06 mol% of the catalyst. Coupling of the two fragments is accomplished using a SNAr reaction between diol 5 and arylfluoride 4 . The overall yield for the five step sequence is 37% on kilogram scale.
- Published
- 2005
34. A Scaleable Synthesis of Fiduxosin
- Author
-
Michael Cain, William S. Baker, Patricia A. Oliver, Steven J. Wittenberger, John Demattei, Weijiang Zhang, Louis S. Seif, Kelley L. Ford, Mike A. Staeger, Rodger F. Henry, Margaret C. Hsu, Maureen A. McLaughlin, Anthony R. Haight, Robert F. Keyes, Richard R. Copp, William R. Nadler, Gregory S. Wayne, Hemant H. Patel, Steven A. King, Anne E. Bailey, Shyamal I. Parekh, and Laura M. Melcher
- Subjects
medicine.medical_specialty ,business.operation ,Abbott Laboratories ,business.industry ,Organic Chemistry ,medicine ,Medical physics ,Physical and Theoretical Chemistry ,Hyperplasia ,urologic and male genital diseases ,business ,medicine.disease - Abstract
Fiduxosin (1) has been under development at Abbott Laboratories for the treatment of benign prostatic hyperplasia. A convergent strategy required methodologies for preparation of an enantiomericall...
- Published
- 2004
35. Synthesis of 4,5-Diaryl-1H-pyrazole-3-ol Derivatives as Potential COX-2 Inhibitors
- Author
-
Randy L. Bell, Rodger F. Henry, Meena V. Patel, Teodozyj Kolasa, and Sandra M. Majest
- Subjects
chemistry.chemical_classification ,Cyclooxygenase 2 Inhibitors ,Molecular Structure ,Pyridinium Compounds ,Stereochemistry ,Organic Chemistry ,Acetal ,General Medicine ,Pyrazole ,Crystallography, X-Ray ,Combinatorial chemistry ,Chemical synthesis ,Sulfonamide ,Isoenzymes ,chemistry.chemical_compound ,Enzyme ,chemistry ,Cyclooxygenase 2 ,Prostaglandin-Endoperoxide Synthases ,Cyclooxygenase 1 ,Pyrazoles ,Cyclooxygenase Inhibitors ,Pyridinium ,Selectivity ,Benzoic acid - Abstract
4,5-Diaryl-1H-pyrazole-3-ol was utilized as a versatile template to synthesize several classes of compounds such as pyrazolo-oxazines 7, pyrazolo-benzooxazines 9, pyrazolo-oxazoles 10, and its analogues 11a-c as potential COX-2 inhibitors. Compounds 11b,c were successfully synthesized with use of pyridinium p-toluenesulfonate mediated cyclization of the ketal intermediate. Diaryl-pyrazolo-benzooxazepine analogues were synthesized by using Cu-mediated cyclization of the O-alkylated arylbromide intermediate. Arylsulfonamides were synthesized efficiently on a large scale with 4-[4-(4-fluorophenyl)-5-hydroxy-2H-pyrazol-3-yl]benzenesulfonamide 31 template readily synthesized from commercially available 4-sulfamoyl benzoic acid 29. The structure of a representative compound from each class was confirmed by X-ray crystallography. Selected compounds tested for inhibitory activity against COX-1 and COX-2 enzymes showed good selectivity for COX-2 versus COX-1 enzyme.
- Published
- 2004
36. Synthesis of 1H-pyridin-2-one derivatives as potent and selective farnesyltransferase inhibitors
- Author
-
Kennan C. Marsh, Jerome Cohen, Nan-Horng Lin, Joy Bauch, Wen-Zhen Gu, Qun Li, Haiying Zhang, Rodger F. Henry, Le Wang, Saul H. Rosenberg, and Hing L. Sham
- Subjects
Cellular activity ,Pyridines ,Stereochemistry ,Farnesyltransferase ,Clinical Biochemistry ,Administration, Oral ,Pharmaceutical Science ,Crystallography, X-Ray ,Biochemistry ,Chemical synthesis ,Structure-Activity Relationship ,chemistry.chemical_compound ,Dogs ,Drug Discovery ,Animals ,Farnesyltranstransferase ,Molecular Biology ,chemistry.chemical_classification ,Farnesyl-diphosphate farnesyltransferase ,Alkyl and Aryl Transferases ,biology ,Organic Chemistry ,Bioavailability ,Enzyme ,chemistry ,Enzyme inhibitor ,biology.protein ,Lactam ,Molecular Medicine - Abstract
Two novel series of potent and selective FTase inhibitors have been synthesized using structure-based design. Medicinal chemistry efforts led to the discovery of compound 4e with potent cellular activity and good oral bioavailability in dog. A synthetic route toward novel heterocycles 1,5-dimethyl-6-oxo-4-aryl-1,6-dihydro-pyridine-2-carbonitrile was established. The structure of compound 5c was confirmed by X-ray crystallography.
- Published
- 2004
37. Synthesis and Structure−Activity Studies on N-[5-(1H-Imidazol-4-yl)-5,6,7,8-tetrahydro-1-naphthalenyl]methanesulfonamide, an Imidazole-Containing α1A-Adrenoceptor Agonist
- Author
-
Rodger F. Henry, Steven A. Buckner, Michael E. Brune, Tracy L. Carr, Sweta P. Katwala, Masaki Nakane, Thomas R. Miller, Arthur A. Hancock, Jorge D. Brioni, Anthony V. Daza, Michael Meyer, John C Cain, William A. Carroll, Robert J. Altenbach, Albert Khilevich, Lynne M. Ireland, Fan Yang, Mark W. Holladay, Meena V. Patel, Rohde Jeffrey J, William H. Bunnelle, Chae H Kang, Timothy A. Esbenshade, Donna M. Gauvin, Teodozyj Kolasa, James P. Sullivan, Karin R. Tietje, Jane Kuk, Pramila Bhatia, Alyssa B. O'Neill, Searle Xenia B, Ivan Milicic, and Erol K. Bayburt
- Subjects
Male ,Agonist ,Tetrahydronaphthalenes ,Stereochemistry ,medicine.drug_class ,Alpha (ethology) ,Blood Pressure ,In Vitro Techniques ,Naphthalenes ,Pharmacology ,Chemical synthesis ,Radioligand Assay ,Structure-Activity Relationship ,Dogs ,Vas Deferens ,Urethra ,In vivo ,Receptors, Adrenergic, alpha-1 ,Drug Discovery ,medicine ,Animals ,Receptor ,Aorta ,Active metabolite ,Sulfonamides ,Chemistry ,Imidazoles ,Vas deferens ,Muscle, Smooth ,Rats ,medicine.anatomical_structure ,Molecular Medicine ,Female ,Adrenergic alpha-1 Receptor Agonists ,Rabbits ,Spleen ,Phenylpropanolamine ,Muscle Contraction ,medicine.drug - Abstract
Structure-activity studies were performed on the alpha(1A)-adrenoceptor (AR) selective agonist N-[5-(1H-imidazol-4-yl)-5,6,7,8-tetrahydro-1-naphthalenyl]methanesulfonamide (4). Compounds were evaluated for binding activity at the alpha(1A), alpha(1b), alpha(1d), alpha(2a), and alpha(2B) subtypes. Functional activity in tissues containing the alpha(1A) (rabbit urethra), alpha(1B) (rat spleen), alpha(1D) (rat aorta), and alpha(2A) (rat prostatic vas deferens) was also evaluated. A dog in vivo model simultaneously measuring intraurethral pressure (IUP) and mean arterial pressure (MAP) was used to assess the uroselectivity of the compounds. Many of the compounds that were highly selective in vitro for the alpha(1A)-AR subtype were also more uroselective in vivo for increasing IUP over MAP than the nonselective alpha(1)-agonists phenylpropanolamine (PPA) (1) and ST-1059 (2, the active metabolite of midodrine), supporting the hypothesis that greater alpha(1A) selectivity would reduce cardiovascular side effects. However, the data also support a prominent role of the alpha(1A)-AR subtype in the control of MAP.
- Published
- 2004
38. Synthesis and Structure−Activity Relationships of a Novel Series of 2,3,5,6,7,9-Hexahydrothieno[3,2-b]quinolin-8(4H)-one 1,1-Dioxide KATP Channel Openers: Discovery of (−)-(9S)-9-(3-Bromo-4-fluorophenyl)-2,3,5,6,7,9- hexahydrothieno[3,2-b]quinolin-8(4H)-one 1,1-Dioxide (A-278637), a Potent KATP Opener That Selectively Inhibits Spontaneous Bladder Contractions
- Author
-
Irene Drizin, Jorge D. Brioni, Michael E. Kort, Hao Bai, Michael C. Fitzgerald, Robert J. Gregg, Linda L. King, Robert J. Altenbach, William A. Carroll, Lin Yi, Michael J. Coghlan, Rodger F. Henry, Rui Tang, Anthony V. Daza, Henry Zhang, Murali Gopalakrishnan, Michael E. Brune, Steven A. Buckner, Kristi L. Whiteaker, Thomas A. Fey, Sean C. Turner, Christopher Cassidy, Mark W. Holladay, Yiyuan Chen, Philip R. Kym, Ivan Milicic, and James P. Sullivan
- Subjects
Membrane potential ,Urinary bladder ,Stereochemistry ,Chemistry ,Pig bladder ,Stimulation ,Pharmacology ,urologic and male genital diseases ,Antispasmodic Agent ,In vitro ,Guinea pig ,medicine.anatomical_structure ,In vivo ,Drug Discovery ,medicine ,Molecular Medicine - Abstract
Structure−activity relationships were investigated on a novel series of sulfonyldihydropyridine-containing KATP openers. Ring sizes, absolute stereochemistry, and aromatic substitution were evaluated for KATP activity in guinea pig bladder cells using a fluorescence-based membrane potential assay and in a pig bladder strip assay. The inhibition of spontaneous bladder contractions in vitro was also examined for a select group of compounds. All compounds studied showed greater potency to inhibit spontaneous bladder contractions relative to their potencies to inhibit contractions elicited by electrical stimulation. In an anesthetized pig model of myogenic bladder overactivity, compound 14 and (−)-cromakalim 1 were found to inhibit spontaneous bladder contractions in vivo at plasma concentrations lower than those that affected hemodynamic parameters. Compound 14 showed approximately 5-fold greater selectivity than 1 in vivo and supports the concept that bladder-selective KATP channel openers may have utility ...
- Published
- 2004
39. [Untitled]
- Author
-
Rodger F. Henry, John Anthony Bauer, John Morris, Stephen G. Spanton, Walter Dziki, William Porter, and John Quick
- Subjects
Pharmacology ,Chemistry ,Hydrogen bond ,Stereochemistry ,Organic Chemistry ,Pharmacology toxicology ,Pharmaceutical Science ,Crystallography ,Polymorphism (materials science) ,Pharmaceutical technology ,medicine ,Molecular Medicine ,Pharmacology (medical) ,Ritonavir ,Conformational polymorphism ,Biotechnology ,medicine.drug - Abstract
Purpose. In the summer of 1998, Norvir semi-solid capsules supplies were threatened as a result of a new much less soluble crystal form of ritonavir. This report provides characterization of the two polymorphs and the structures and hydrogen bonding network for each form.
- Published
- 2001
40. Dealing with the Impact of Ritonavir Polymorphs on the Late Stages of Bulk Drug Process Development
- Author
-
Kathyrn McFarland, Harry O. Spiwek, William Porter, Patel Ketan M, John Quick, Mauro Soldani, Phil Bauer, and Dave Riley, Sanjay R. Chemburkar, Bauer John F, Stephen G. Spanton, Kris C. Deming, Rodger F. Henry, John Donaubauer, John Morris, Walter Dziki, and B. A. Narayanan
- Subjects
Stereochemistry ,Process development ,Philosophy ,Organic Chemistry ,Human immunodeficiency virus (HIV) ,medicine.disease_cause ,Virology ,Bulk drug ,Causative organism ,medicine ,Ritonavir ,Protease inhibitor (pharmacology) ,Physical and Theoretical Chemistry ,medicine.drug - Abstract
Ritonavir (Kempf, D. J.; Marsh, K. C., Denissen, J. F.; McDonald, E.; Vasavanonda, S.; Flentge, C. A.; Green, B. E.; Fino, L.; Park, C. H.; Kong, X. P.; Wideburg, N. E.; Saldivar, A.; Ruitz, L.; Kati, W. M.; Sham, H. L.; Robins, T.; Stewart, K. D.; Hsu, A.; Plattner, J. J.; Leonard, J. M.; Norbeck, D. W. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 2484) is Abbott's novel protease inhibitor, for human immunodeficiency virus (HIV), the causative organism of acquired immunodeficiency syndrome (AIDS). It is marketed as Norvir. From the discovery of ritonavir until the new drug application (NDA) filing, only one crystalline form was known to exist. Attempts to identify other possible crystal forms were unsuccessful. Two years after the launch of Norvir to the market, some lots of Norvir capsules failed a dissolution specification. Investigation of this phenomena revealed the existence of a crystal form of ritonavir other than the one already known (Form I). This new crystal form was designated as Form II. The two ...
- Published
- 2000
41. A flexible synthesis of privileged structural motifs using the Ollis–Sweeney ammonium ylid rearrangement
- Author
-
Stevan W. Djuric, Jeffrey L. Cross, Vijaya Gracias, Rodger F. Henry, and Alan F. Gasiecki
- Subjects
chemistry.chemical_compound ,Ring-closing metathesis ,Chemistry ,Stereochemistry ,Organic Chemistry ,Drug Discovery ,Ammonium ,Structural motif ,Biochemistry ,Combinatorial chemistry - Abstract
The Ollis–Sweeney ammonium ylid rearrangement has been effectively utilized to provide access to hitherto unknown hybrid privileged structural motifs. The rearrangement of didehydropiperidinium salts containing tethered olefins at the 4-position afforded, after subsequent ring closing metathesis, novel spirocyclic scaffolds suitable for further elaboration and incorporation of final structures into HTS sets.
- Published
- 2008
42. 3-Keto-11,12-carbazate Derivatives of 6-0-Methylerythromycin A Synthesis and In Vitro Activity
- Author
-
Yat Sun Or, Angela M. Nilius, Rodger F. Henry, Pauline M. Johnson, George Griesgraber, Daniel T. W. Chu, Jacob J. Plattner, and Robert K. Flamm
- Subjects
Pharmacology ,Stereochemistry ,Erythromycin ,biochemical phenomena, metabolism, and nutrition ,Alkylation ,Biology ,biology.organism_classification ,Combinatorial chemistry ,In vitro ,Acylation ,Drug Discovery ,medicine ,Structure–activity relationship ,lipids (amino acids, peptides, and proteins) ,Antibacterial activity ,Bacteria ,Antibacterial agent ,medicine.drug - Abstract
The 11,12-cyclic carbazate of 3-keto-6-O-methylerythromycin A (4) was prepared. This compound shows in vitro antibacterial activity comparable to erythromycin A (1) against erythromycin-susceptible organisms and increased activity against some erythromycin-resistant organisms. Using 4 as a lead, a series of analogues was prepared by acylation or alkylation of the carbazate nitrogen. Several of the N-alkylated derivatives showed dramatically improved antibacterial activity against both susceptible and resistant organisms as compared to erythromycin A.
- Published
- 1996
43. Dibefurin, a Novel Fungal Metabolite Inhibiting Calcineurin Phosphatase Activity
- Author
-
Gregory M. Brill, Rodger F. Henry, Sunil Kadam, Linda M. Traphagen, Usha Premachandran, James B. McAlpine, Neal S. Burres, Patrick E. Humphrey, Marianna Jackson, Randal H. Chen, Jacob J. Clement, James P. Karwowski, and Dolores K. Cwik
- Subjects
Magnetic Resonance Spectroscopy ,Phosphoric monoester hydrolases ,Metabolite ,Phosphatase ,Size-exclusion chromatography ,Biology ,Crystallography, X-Ray ,chemistry.chemical_compound ,Spectroscopy, Fourier Transform Infrared ,Drug Discovery ,Phosphoprotein Phosphatases ,Enzyme Inhibitors ,Benzofurans ,Pharmacology ,chemistry.chemical_classification ,Molecular Structure ,Calcineurin ,Fungi ,Biological activity ,Enzyme ,chemistry ,Biochemistry ,Enzyme inhibitor ,Fermentation ,Chromatography, Gel ,biology.protein ,Calmodulin-Binding Proteins - Abstract
The novel calcineurin inhibitor, dibefurin, has been isolated from the fungal culture AB 1650I-759. The isolation was bioactivity-directed fractionation using an assay which measures the phosphatase activity of calcineurin. The compound was purified by countercurrent, reverse phase and gel filtration chromatographies. Several studies, including crystallographic, NMR and MS, revealed that dibefurin is a novel dimeric compound of a unique structural type.
- Published
- 1996
44. An Efficient Multigram Synthesis of the Potent Histamine H3 Antagonist GT-2331 and the Reassessment of the Absolute Configuration
- Author
-
Francis A. J. Kerdesky, Huaqing Liu, Rodger F. Henry, Youssef L. Bennani, and Arthur A. Hancock, Lawrence A. Black, Michael Fitzgerald, and Timothy A. Esbenshade
- Subjects
Models, Molecular ,Molecular Structure ,Stereochemistry ,Organic Chemistry ,Imidazoles ,Absolute configuration ,Antagonist ,Histamine h ,Crystallography, X-Ray ,Chemical synthesis ,Dextrorotatory ,chemistry.chemical_compound ,Histamine Agents ,chemistry ,Receptors, Histamine H3 ,Enantiomer ,Histamine - Abstract
GT-2331 is a potent histamine H(3) antagonist which has entered clinical trials. Efficient multigram syntheses of this compound and its enantiomer are described. The literature reports that GT-2331 is the dextrorotatory (+), more potent, enantiomer of 4-[2-(5,5-dimethylhex-1-ynyl)cyclopropyl]-1H-imidazole with the absolute configuration of (1R,2R)-1. However, we found that the dextrorotatory, more potent, enantiomer of 4-[2-(5,5-dimethylhex-1-ynyl)cyclopropyl]-1H-imidazole has the (1S,2S) absolute configuration. We suggest a reconsideration of the absolute configuration of GT-2331.
- Published
- 2003
45. Synthesis and SAR of 4-aminocyclopentapyrrolidines as N-type Ca²⁺ channel blockers with analgesic activity
- Author
-
Xenia, Beebe, Daria, Darczak, Rodger F, Henry, Timothy, Vortherms, Richard, Janis, Marian, Namovic, Diana, Donnelly-Roberts, Karen L, Kage, Carol, Surowy, Ivan, Milicic, Wende, Niforatos, Andrew, Swensen, Kennan C, Marsh, Jill M, Wetter, Pamela, Franklin, Scott, Baker, Chengmin, Zhong, Gricelda, Simler, Erica, Gomez, Janel M, Boyce-Rustay, Chang Z, Zhu, Andrew O, Stewart, Michael F, Jarvis, and Victoria E, Scott
- Subjects
Male ,Rats, Sprague-Dawley ,Analgesics ,Disease Models, Animal ,Structure-Activity Relationship ,Calcium Channels, N-Type ,Pyrrolidines ,Behavior, Animal ,Acetamides ,Animals ,Pain ,Calcium Channel Blockers ,Rats - Abstract
A novel 4-aminocyclopentapyrrolidine series of N-type Ca(2+) channel blockers have been discovered. Enantioselective synthesis of the 4-aminocyclopentapyrrolidines was enabled using N-tert-butyl sulfinamide chemistry. SAR studies demonstrate selectivity over L-type Ca(2+) channels. N-type Ca(2+) channel blockade was confirmed using electrophysiological recording techniques. Compound 25 is an N-type Ca(2+) channel blocker that produces antinociception in inflammatory and nociceptive pain models without exhibiting cardiovascular or motor liabilities.
- Published
- 2012
46. The effects of methylene-substituents in crown ether backbones. Crystal structures of [Na(OH2)(methylene-16-crown-5)]I, [Na(NO2)(methylene-16-crown-5)]·0.5 (H2O), 3,16-dimethylene-26-crown-8,[Na4I4(3,16-dimethylene-26-crown-8)], and [Na2(OH2)4(3,16-dimethylene-26-crown-8)]I2
- Author
-
Andrew N. Rollins, Andrew H. Bond, Robin D. Rogers, and Rodger F. Henry
- Subjects
chemistry.chemical_classification ,Denticity ,Stereochemistry ,Coordination number ,General Chemistry ,Crystal structure ,Medicinal chemistry ,chemistry.chemical_compound ,chemistry ,Molecule ,Orthorhombic crystal system ,Methylene ,Crown ether ,Monoclinic crystal system - Abstract
The crystal structures of five methylene substituted crown ether compounds were investigated. [Na(OH2)(methylene-16-crown-5)]I is orthorhombic, P212121 with a = 7.920(9), b = 10.787(3), c = 20.870(5)A, and Dcalc = 1.54 g cm−3 for Z = 4. The sodium cation is coordinated to all five etheric oxygen atoms and a water molecule giving it a coordination number of six. [Na(NO2)(methylene-16-crown-5)]·0.5(H2O) is monoclinic, P21/n with a = 20.566(6), b = 8.605(9), c = 20.821(7)A, β = 115.66(3)·, and Dcalc = 130 g cm−3 for Z = 8. Each sodium cation is seven-coordinate, coordinated to all five etheric oxygen atoms and a bidentate nitrite anion. One crown molecule is severely disordered. The macrocycles in both methylene-16-crown-5 structures have essentially the same conformations. 3,16-dimethylene-26-crown-8 is orthorhombic, Pccn with a = 18.061(4), b = 14.320(4), c = 8.659(7)A, and Dcalc = 1.20 g cm−3 for Z = 4. The crown ether has an elongated cavity generated by a series of six consecutive anti torsion ...
- Published
- 1994
47. Synthesis of Ring B-Rearranged Taxane Analogs
- Author
-
Rodger F. Henry, Leping Li, Clarence J. Maring, Sheela A. Thomas, Clinton M. Yeung, David J. Grampovnik, Larry L. Klein, and Jacob J. Plattner
- Subjects
chemistry.chemical_compound ,chemistry ,Aldol reaction ,Stereochemistry ,Organic Chemistry ,Molecule ,Biological activity ,Tumor cells ,Crystal structure ,Diterpene ,Cyclopropane - Abstract
Reaction of the C-7 hydroryl group on the 9-dihydrotaxane skeleton with triflic anhydride causes a major skeletal rearrangement to occur leading to contraction of ring B. In addition the formation of a ring C-fused cyclopropane structure occurs. The requisite C-13 phenylisoserinate side chins are appended via an initial deacylation of the C-13 acetate followed by reacylation and deprotection. These rearranged compounds show very similar structural features with the parent 9-dihydrotaxane skeleton and also retain biological activity
- Published
- 1994
48. Convenient access to 2-pyridylindole cytotoxic anticancer agents
- Author
-
Jacob J. Plattner, L. Scif, Rodger F. Henry, J.G. Phillips, Daniel T. W. Chu, and Stephen G. Spanton
- Subjects
chemistry.chemical_compound ,Reaction sequence ,Chemistry ,Stereochemistry ,Organic Chemistry ,Drug Discovery ,Pyridine ,Cytotoxic T cell ,Biochemistry - Abstract
The regiospecific synthesis of highly substituted 2-pyridylindoles has been accomplished via a three step reaction sequence which involves the unique formation of the synthetically flexible pyridine intermediate 2 .
- Published
- 1993
49. Synthesis of (9R)-9-dihydro-6,9-anhydroerythromycin A
- Author
-
Rodger F. Henry, Larry L. Klein, Paul Kurath, and Leslie A. Freiberg
- Subjects
chemistry.chemical_classification ,chemistry ,Intramolecular reaction ,Bicyclic molecule ,Organic Chemistry ,X-ray crystallography ,Chemical reduction ,Glycoside ,Molecule ,Crystal structure ,Combinatorial chemistry ,Antibacterial agent - Published
- 1993
50. The chemistry of ascomycin: Structure determination and synthesis of pyrazole analogues
- Author
-
Rodger F. Henry, James B. McAlpine, Richard F. Clark, Qinghua Xie, David N. Whittern, Yat Sun Or, and Jay R. Luly
- Subjects
Conformational change ,Chemical research ,Chemistry ,Stereochemistry ,Organic Chemistry ,Biological activity ,Pyrazole ,Biochemistry ,chemistry.chemical_compound ,Drug Discovery ,medicine ,Side chain ,Molecule ,Ascomycin ,medicine.drug - Abstract
Ascomycin (1) is a close analogue of the immunosuppressant FK-506 (2) which differs slightly in the side chain at position 21 (ethyl vs allyl). Structurally unique ascomycin and FK-506 are the subjects of intense chemical research because of their application in organ transplantation and autoimmune disease. We have been interested in studying the effect of structural modification and conformational change on biological activity. This paper reports the fermentation and structural determination of ascomycin as well as the synthesis and structure confirmation of a series of pyrazole analogues (3 and 4) derived from ascomycin.
- Published
- 1993
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